These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8418#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 736 fasta sequence [GGCGTAGAGGGAACGAGAAGAGGCGAGTTCTTGACCCTTCCACCGTTGCGCGCTTCGTCTGAGTTTTGCGCCTCTCCTCGAGACCGGCATGGATGCAAAGAACTTAGGCAACAGACGACAAAATCATGAGAAGAGTACAATGACAGAAGATGCACGGAGCCGAGATCAGGAGACCTTGCAGCGGTTTGCAGATTCAGATA-TTACTGTGAGTCCAGTCAACAGTCATGAATCTGGAGATGTGAACATGGAAGCTGCCATCTCTGCTGAGGATGTCTTGCGAGCTGGTGGTTTCGGAGCAAAAGATG-ACATCGGCAGCCTCCTTCCCACAGCCGTAGATTCGACTGATTTCGAGGCCTCG-CTACGGGATGCTCGCGACTTTGAAGGCGAGAGTGAAAAACCATCGCATCCTGGACTAGGATACA-AAGCAAATGAAACTGACA-GT-GGAGGCAAACCATCAGATGTGCAGCAGCAGCAGCAGCAGCAGTGAT-CCTTAGTGTTCTCTTCT-CCTCCATGCAATTTTAGCTTTGGATAACATGACATTCGCCGCGTTCCTCTAGTGCTCCGAAGACCTATCCTGTTCTGACTTTGTGCTAAGGTATGTGGCATTTCTGTTGTTTCCCTGATGTACCATGTATGAACGTGACCATGATGATTCTGCTGTATGAACCAGATCGTTTCACCTTGTATACCT-AAGTATTAGTGGTAGTAGTTTGGCCCAGTTTTTTCAAAAAAAAAA] [+] EMBL AK101499 [GGCGTAGAGGGAACGAGAAGAGGCGAGTTCTTGACCCTTCCACCGTTGCGCGCTTCGTCTGAGTTTTGCGCCTCTCCTCGAGACCGGCATGGATGCAAAGAACTTAGGCAACAGACGACAAAATCATGAGAAGAGTACAATGACAGAAGATGCACGGAGCCGAGATCAGGAGACCTTGCAGCGGTTTGCAGATTCAGATA TTACTGTGAGTCCAGTCAACAGTCATGAATCTGGAGATGTGAACATGGAAGCTGCCATCTCTGCTGAGGATGTCTTGCGAGCTGGTGGTTTCGGAGCAAAAGATG ACATCGGCAGCCTCCTTCCCACAGCCGTAGATTCGACTGATTTCGAGGCCTCG CTACGGGATGCTCGCGACTTTGAAGGCGAGAGTGAAAAACCATCGCATCCTGGACTAGGATACA AAGCAAATGAAACTGACA GT GGAGGCAAACCATCAGATGTGCAGCAGCAGCAGCAGCAGCAGTGAT CCTTAGTGTTCTCTTCT CCTCCATGCAATTTTAGCTTTGGATAACATGACATTCGCCGCGTTCCTCTAGTGCTCCGAAGACCTATCCTGTTCTGACTTTGTGCTAAGGTATGTGGCATTTCTGTTGTTTCCCTGATGTACCATGTATGAACGTGACCATGATGATTCTGCTGTATGAACCAGATCGTTTCACCTTGTATACCT AAGTATTAGTGGTAGT ] [+] EMBL AU225207 [ gccgctGGCGAGTTCTTGACCCTTCCACCGTTGCGCGCTTCGTCTGAGTTTTGCGCCTCTCCTCGAGACCGGCATGGATGCAAAGAACTTAGGCAACAGACGACNAAATCATGATAAGAGTACCATGACAGAANATGCCCGGAGCCGANATCANGAGACCTTGCANCGGTTTGCAGATTCNGATA TTA ] [+] EMBL CA882830 [ GAAGATGCACGGAGCCGAGATCAGGAGACCTTGCAGCGGTTTGCAGATTCAGATA TTACTGTGAGTCCAGTCAACAGTCATGAATCTGGAGATGTGAACATGGAAGCTGCCATCTCTGCTGAGGATGTCTTGCGAGCTGGTGGTTTCGGAGCAAAAGATG ACATCGGCAGTCTCCTTCCCACAGCCGTAGATTCGACTGATTTCGAGGCCTCG CTACGGGATGCTCGCGACTTTGAAGGCGAGAGTGAAAAACCATCGCATCCTGGACTAGGATACA AAGCAAATGAAACTGACA GT GGAGGCAAACCATCAGATGTGCAGCAGCAGCAGCAGCAGCAGTGAT CCTTAGTGTTCTCTTCT CCTCCATGCAATTTTAGCTTTGGATAACATGACATTCGCCGCGTTCCTCTAGTGCTCCGAAGACCTATCCTGTTCTGACTTTGTGCTAAGGTATGTGGCATTTCTGTTGTT ] [+] EMBL BI798436 [ gagGATCAGGAGA CTTGCAGCGTTTTGCAGATTCAGATATTTACTGTGAGTCCAGTCAACAGTCATGAATCTGGAGATGTGAACATGGAAGCTGCCATCTCTGCTGAGGATGTCTTGCGAGCTGGTGGTTTCGGAGCAAAAGATG ACATCGGCAGCCTCCTTCCCACAGCCGTAGATTCGACTGATTTCGAGGCCTCGTCTACGGGATGCTCGCGACTTTGAAGGCGAGAGTGAAAAACCATCGCATCCTGGACTAGGATACA AAGCAAATGAAACTGACA GTGGGAGGCAAACCATCAGATGTGCAGCAGCAGCAGCAGCAGCAGTGATGCCTTAGTGTTCTCTTCTGCCTgcc ] [+] EMBL BI805303 [ TGGAA C GCCATCTCTTCTGAGGATTTCTTGCGA CTGGTGTTTTCGGAGCCAAAGATGTACATCGGCAGCCTCCTTCCCACAGCCGTAGATTCGACTGATTTCGAGGCCTCG CTACGGGATGCTCGCGACTTTGAAGGCGAGAGTGAAAAACCATCGCATCCTGGACTAGGATACACAAGCAAATGAAACTGACACGT GGAGGCCAACCATCAGATGTGCAGCAGCAGCAGCAGCAGCAGTGAT CCTTAGTGTTCTCTTCT CCTCCATGCAATTTTAGCTTTGGATAACATGACATTCGCCGCGTTCCTCTAGTGCTCCGAAGACCTATCCTGTTCTGACTTTGTGCTAAGGTATGTGGCATTTCTGTTGTTTCCCTGATGTACCATGTATGAACGTGACCATGATGATTCTGCTGTATGAACCAGATCGTTTCACCTTGTA ACCTAAAGTATTAGTGGTAGTAGTTTGGCCCAGTTTTTTCAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||