These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8425#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2420 fasta sequence [CTCGCGCTATCCCGTCTCCTCTCCTGGTTCCCTCTTTCTCCCGCTCCGTCCGCCTCCGGTGAGCTGAGCTCCGGCGAGGCGAGGTCGGAGATCCCACCGCCGTGTCGCCGCCGCCTCCAAGTTCTCCTTCCTCCCTCGCCTCTTCGCGCCGGCGAGGTCCCACCTTCGCCTTCCCGGATCGGCGCCGGTGAGGTCCGGCGACATATCGCGTCCCCGTGCATCCATCTACTCGGCCGGCGACCGCGCGCCCCTTCGCCGTCGTCTTATGCGCTTCCCACGGGGCCGCACGATCCGGACATGGGCGCGTTTGGGCGAAGACGCCGCCTATTCGCGGTTCGCGCCCCCCTCCTCTCCCGCTTCGTTTCTCCCCAATCTCCACCTCCACCTTCTGCGCGCGCCGCTGCCATTCACACGCATCGAGTAAGCTCGATCTCATCACCTCCCGAGCTGTAGTCTTTGCCCGCACTTGAGGTCGCGCCGGCCGCCGGGGCGGC--AGAGAGAGAGAGAGAGAGAGAGGATTCAGAGAGGTGTTGTTTGGCCGCGCACGAGAGGTGTTCGACGATTTGCCCACCTGGTCTCCTCCAAGCCAGAGAGAGGTTATGCGCCGGTGCGGCCGAATTTTTTTCCCTCCGTCTCTCAAGTTCGTGTCTCATAGCGGCGGCAGGCTCTCCGCGACACGCTTCTCTACCACCGGGTTCGACCTCCCCGACTGGTTCAGGAACCCCAAGGACGATGGCTCATGCGCCGGCTTGGATGACGAGGAGGACGACATTTTTGTGCTCCCGACTGAACCCAACGTCTCGGATGAGCGAAGAAGCCAGAGCAGCACCTCCAGGTCGCTGTCGATCCGCCCTGGCTTTCCTGCAACTGCCTCCCATGAGGATGCTGAGTTCGAGGCCGACATCGATGAGGTCAGCAGGATCCTTAGTGCTCGTTTCGCGTCTCCTGAGGCCATTATGATAGCCATGGACTGCTGCTCTGTAAGGGTCACTGGCTGCCTTGTTGACAAGATCCTGACGAGGTTCAGCAATGATTGGGTGGCGGCATTCGGGTTCTTCATGTGGGTTGGCACTCAGGGAGGGTACTGCCATTGTGCCGATTCATATGACTTGATGGTAGATATACTGGGGAAGTTCAAGCAGTTTGATCTGATGTGGGGTTTGATCAATCAGATGGTTGAGGTTGGAGGCTTGATGTCGCTCATGACGATGACAAAGGTGATGAGAAGGCTTGCTGGGGCAAGTCGATGGACCGAGGCCATCGACGCCTTCCATAAGATGGATCGGTTTGGAGTTGTGAAGGATACAAAGGCCATGAATGTGCTCCTGGACACACTGTGCAAGGAGAGGAGCGTGAAGCGCGCAAGAGGCGTCTTCCAAGAGCTGAGGGGAACAATACCTCCAGACGAGAACAGCTTCAATACTCTCGTGCATGGTTGGTGTAAGGCAAGGATGCTGAAGGAAGCTCTAGACACAATGGAGGAGATGAAGCAGCATGGATTCAGTCCTTCAGTGGTGACTTATACCAGCCTGGTAGAAGCATACTGCATGGAGAAAGATTTTCAGACTGTTTACGCTCTCTTGGACGAGATGCGCAAGAGGCGGTGTCCCCCAAATGTTGTTACATATACCATTTTGATGCATGCACTGGGGAAGGCTGGGAGAACGCGAGAAGCTTTGGATACCTTTGACAAGTTGAAGGAAGATGGTGTTGCTCCAGATGCTTCCTTCTACAACTCCCTGATCTACATACTTGGCAGAGCTGGGAGGTTGGAAGATGCATACTCTGTGGTTGAAGAAATGCGCACAACTGGAATCGCCCCTAACGTCACTACCTTCAACACCTTGATTTCTGCTGCTTGTGACCACTCTCAGGCAGAGAATGCCCTGAAGCTTCTGGTTAAGATGGAGGAGCAGTCATGCAATCCAGACATAAAGACATACACGCCATTGCTGAAGCTGTGCTGTAAAAGACAGTGGGTAAAGATACTTCTGTTCCTAGTGTGCCATATGTTTAGAAAGGACATTAGCCCTGATTTCAGCACTTACACCTTGTTGGTAAGCTGGCTGTGCAGAAATGGGAAGGTTGCCCAGTCTTGCCTGTTCTTGGAGGAAATGGTGTCAAAGGGTTTTGCTCCAAAGCAGGAGACATTTGATCTTGTGATGGAGAAGCTTGAGAAGAGGAATCTGCAGTCAGTGTACAAAAAGATTCAAGTTCTCAGGACGCAGGTAACAAATCTGAAGCATATGGAGTCCTTTCAATGAGAGGTCACTGATGGTGGACAACATTGTGCTGTGTTGTACAACACCTGTGGTCATGAATCTTAATATACTGCTCATTGGAATGTTTATGCAAACTTAATATGTACTGCTCATTGGAATGTTTATGCAAATGCGACTGTGATTCAGTAAAAAAAAAAA] [+] EMBL AK063445 [CTCGCGCTATCCCGTCTCCTCTCCTGGTTCCCTCTTTCTCCCGCTCCGTCCGCCTCCGGTGAGCTGAGCTCCGGCGAGGCGAGGTCGGAGATCCCACCGCCGTGTCGCCGCCGCCTCCAAGTTCTCCTTCCTCCCTCGCCTCTTCGCGCCGGCGAGGTCCCACCTTCGCCTTCCCGGATCGGCGCCGGTGAGGTCCGGCGACATATCGCGTCCCCGTGCATCCATCTACTCGGCCGGCGACCGCGCGCCCCTTCGCCGTCGTCTTATGCGCTTCCCACGGGGCCGCACGATCCGGACATGGGCGCGTTTGGGCGAAGACGCCGCCTATTCGCGGTTCGCGCCCCCCTCCTCTCCCGCTTCGTTTCTCCCCAATCTCCACCTCCACCTTCTGCGCGCGCCGCTGCCATTCACACGCATCGAGTAAGCTCGATCTCATCACCTCCCGAGCTGTAGTCTTTGCCCGCACTTGAGGTCGCGCCGGCCGCCGGGGCGGC AGAGAGAGAGAGAGAGAGAGAGGATTCAGAGAGGTGTTGTTTGGCCGCGCACGAGAGGTGTTCGACGATTTGCCCACCTGGTCTCCTCCAAGCCAGAGAGAGGTTATGCGCCGGTGCGGCCGAATTTTTTTCCCTCCGTCTCTCAAGTTCGTGTCTCATAGCGGCGGCAGGCTCTCCGCGACACGCTTCTCTACCACCGGGTTCGACCTCCCCGACTGGTTCAGGAACCCCAAGGACGATGGCTCATGCGCCGGCTTGGATGACGAGGAGGACGACATTTTTGTGCTCCCGACTGAACCCAACGTCTCGGATGAGCGAAGAAGCCAGAGCAGCACCTCCAGGTCGCTGTCGATCCGCCCTGGCTTTCCTGCAACTGCCTCCCATGAGGATGCTGAGTTCGAGGCCGACATCGATGAGGTCAGCAGGATCCTTAGTGCTCGTTTCGCGTCTCCTGAGGCCATTATGATAGCCATGGACTGCTGCTCTGTAAGGGTCACTGGCTGCCTTGTTGACAAGATCCTGACGAGGTTCAGCAATGATTGGGTGGCGGCATTCGGGTTCTTCATGTGGGTTGGCACTCAGGGAGGGTACTGCCATTGTGCCGATTCATATGACTTGATGGTAGATATACTGGGGAAGTTCAAGCAGTTTGATCTGATGTGGGGTTTGATCAATCAGATGGTTGAGGTTGGAGGCTTGATGTCGCTCATGACGATGACAAAGGTGATGAGAAGGCTTGCTGGGGCAAGTCGATGGACCGAGGCCATCGACGCCTTCCATAAGATGGATCGGTTTGGAGTTGTGAAGGATACAAAGGCCATGAATGTGCTCCTGGACACACTGTGCAAGGAGAGGAGCGTGAAGCGCGCAAGAGGCGTCTTCCAAGAGCTGAGGGGAACAATACCTCCAGACGAGAACAGCTTCAATACTCTCGTGCATGGTTGGTGTAAGGCAAGGATGCTGAAGGAAGCTCTAGACACAATGGAGGAGATGAAGCAGCATGGATTCAGTCCTTCAGTGGTGACTTATACCAGCCTGGTAGAAGCATACTGCATGGAGAAAGATTTTCAGACTGTTTACGCTCTCTTGGACGAGATGCGCAAGAGGCGGTGTCCCCCAAATGTTGTTACATATACCATTTTGATGCATGCACTGGGGAAGGCTGGGAGAACGCGAGAAGCTTTGGATACCTTTGACAAGTTGAAGGAAGATGGTGTTGCTCCAGATGCTTCCTTCTACAACTCCCTGATCTACATACTTGGCAGAGCTGGGAGGTTGGAAGATGCATACTCTGTGGTTGAAGAAATGCGCACAACTGGAATCGCCCCTAACGTCACTACCTTCAACACCTTGATTTCTGCTGCTTGTGACCACTCTCAGGCAGAGAATGCCCTGAAGCTTCTGGTTAAGATGGAGGAGCAGTCATGCAATCCAGACATAAAGACATACACGCCATTGCTGAAGCTGTGCTGTAAAAGACAGTGGGTAAAGATACTTCTGTTCCTAGTGTGCCATATGTTTAGAAAGGACATTAGCCCTGATTTCAGCACTTACACCTTGTTGGTAAGCTGGCTGTGCAGAAATGGGAAGGTTGCCCAGTCTTGCCTGTTCTTGGAGGAAATGGTGTCAAAGGGTTTTGCTCCAAAGCAGGAGACATTTGATCTTGTGATGGAGAAGCTTGAGAAGAGGAATCTGCAGTCAGTGTACAAAAAGATTCAAGTTCTCAGGACGCAGGTAACAAATCTGAAGCATATGGAGTCCTTTCAATGAGAGGTCACTGATGGTGGACAACATTGTGCTGTGTTGTACAACACCTGTGGTCATGAATCTTAATATACTGCTCATTGGAATGTTTATGCAAACTTAATATGTACTGCTCATTGGAATGTTTATGCAAATGCGACT ] [+] EMBL AK070923 [ CCGGTGAGCTGAGCTCCGGCGAGGCGAGGTCGGAGATCCCACCGCCGTGTCGCCGCCGCCTCCAAGTTCTCCTTCCTCCCTCGCCTCTTCGCGCCGGCGAGGTCCCACCTTCGCCTTCCCGGATCGGCGCCGGTGAGGTCCGGCGACATATCGCGTCCCCGTGCATCCATCTACTCGGCCGGCGACCGCGCGCCCCTTCGCCGTCGTCTTATGCGCTTCCCACGGGGCCGCACGATCCGGACATGGGCGCGTTTGGGCGAAGACGCCGCCTATTCGCGGTTCGCGCCCCCCTCCTCTCCCGCTTCGTTTCTCCCCAATCTCCACCTCCACCTTCTGCGCGCGCCGCTGCCATTCACACGCATCGAGTAAGCTCGATCTCATCACCTCCCGAGCTGTAGTCTTTGCCCGCACTTGAGGTCGCGCCGGCCGCCGGGGCGGCAGAGAGAGAGAGAGAGAGAGAGAGGATTCAGAGAGGTGTTGTTTGGCCGCGCACGAGAGGTGTTCGACGATTTGCCCACCTGGTCTCCTCCAAGCCAGAGAGAGGTTATGCGCCGGTGCGGCCGAATTTTTTTCCCTCCGTCTCTCAAGTTCGTGTCTCATAGCGGCGGCAGGCTCTCCGCGACACGCTTCTCTACCACCGGGTTCGACCTCCCCGACTGGTTCAGGAACCCCAAGGACGATGGCTCATGCGCCGGCTTGGATGACGAGGAGGACGACATTTTTGTGCTCCCGACTGAACCCAACGTCTCGGATGAGCGAAGAAGCCAGAGCAGCACCTCCAGGTCGCTGTCGATCCGCCCTGGCTTTCCTGCAACTGCCTCCCATGAGGATGCTGAGTTCGAGGCCGACATCGATGAGGTCAGCAGGATCCTTAGTGCTCGTTTCGCGTCTCCTGAGGCCATTATGATAGCCATGGACTGCTGCTCTGTAAGGGTCACTGGCTGCCTTGTTGACAAGATCCTGACGAGGTTCAGCAATGATTGGGTGGCGGCATTCGGGTTCTTCATGTGGGTTGGCACTCAGGGAGGGTACTGCCATTGTGCCGATTCATATGACTTGATGGTAGATATACTGGGGAAGTTCAAGCAGTTTGATCTGATGTGGGGTTTGATCAATCAGATGGTTGAGGTTGGAGGCTTGATGTCGCTCATGACGATGACAAAGGTGATGAGAAGGCTTGCTGGGGCAAGTCGATGGACCGAGGCCATCGACGCCTTCCATAAGATGGATCGGTTTGGAGTTGTGAAGGATACAAAGGCCATGAATGTGCTCCTGGACACACTGTGCAAGGAGAGGAGCGTGAAGCGCGCAAGAGGCGTCTTCCAAGAGCTGAGGGGAACAATACCTCCAGACGAGAACAGCTTCAATACTCTCGTGCATGGTTGGTGTAAGGCAAGGATGCTGAAGGAAGCTCTAGACACAATGGAGGAGATGAAGCAGCATGGATTCAGTCCTTCAGTGGTGACTTATACCAGCCTGGTAGAAGCATACTGCATGGAGAAAGATTTTCAGACTGTTTACGCTCTCTTGGACGAGATGCGCAAGAGGCGGTGTCCCCCAAATGTTGTTACATATACCATTTTGATGCATGCACTGGGGAAGGCTGGGAGAACGCGAGAAGCTTTGGATACCTT ] [+] EMBL CB636317 [ CGAGGTCGGAGATCCCACCGCCGTGTCGCCGCCGCCTCCAAGTTCTCCTTCCTCCCTCGCCTCTTCGCGCCGGCGAGGTCCCACCTTCGCCTTCCCGGATCGGCGCCGGTGAGGTCCGGCGACATATCGCGTCCCCGTGCATCCATCTACTCGGCCGGCGACCGCGCGCCCCTTCGCCGTCGTCTTATGCGCTTCCCACGGGGCCGCACGATCCGGACATGGGCGCGTTTGGGCGAAGACGCCGCCTATTCGCGGTTCGCGCCCCCCTCCTCTCCCGCTTCGTTTCTCCCCAATCTCCACCTCCACCTTCTGCGCGCGCCGCTGCCATTCACACGCATCGAGTAAGCTCGATCTCATCACCTCCCGAGCTGTAGTCTTTGCCCGCACTTGAGGTCGCGCCGGCCGCCGGGGCGGC AGAGAGAGAGAGAGAGA ] [-] EMBL CB636318 [ GGAGCAGTCATGCAATCCAGACATAAAGACATACACGCCATTGCTGAAGTTGTGCTGTAAAAGACAGTGGGTAAAGATACTTTTGTTCCTAGTGTGCCATATGTTTAGAAAGGACATTAGCCCTGATTTCAGCACTTACACCTTGTTGGTAAGCTGGCTGTGCAAAAATGGGAAGGTTGCCCAGTTTTGCCTGTTTTTGGAGGAAATGGTGTCAAAGGGTTTTGCTCCAAAGCAGGAGACATTTGATTTTGTGATGGAGAAGCTTGAGAAAAGGAATTTGCAGTCAGTGTACAAAAAGATTCAAGTTTTCAGGACGCAGGTAACAAATTTGAAGCATATGGAGTCCTTTCAATGAGAGGTCACTGATGGTGGACAACATTGTGCTGTGTTGTACAACACCTGTGGTCATGAATTTTAATAAACTGCTCATTGGAATGTTTATGCAAACTTAATATGTACTGCTCATTGGAATGTTTATGCAAATGCGATTG ] [+] EMBL AT003389 [ AGAAAGGACATTAGCCCTGATTTCAGCACTTACACCTTGTTGGTAAGCTGGCTGTGCAGAAATGGGAAGGTTGCCCAGTCTTGCCTGTTCTTGGAGGAAATGGTGTCAAAGGGTTTTGCTCCAAAGCAGGAGACATTTGATCTTGTGATGGAGAAGCTTGAGAAGAGGAATCTGCAGTCAGTGTACAAAAAGATTCAAGTTCTCAGGACGCAGGTAACAAATCTGAAGCATATGGAGTCCTTTCAATGAGAGGTCACTGATGGTGGACAACATTGTGCTGTGTTGTACAACACCTGTGGTCATGAATCTTAATATACTGCTCATTGGAATGTTTATGCAAACTTAATATGTACTGCTCATTGGAATGTTTATGCAAATGCGACTGTGATTCAGTAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||