These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8429#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 887 fasta sequence [TCTTTCTTTTTAAATAAAAACNCTGTTCTTTATCAAGCAAGGATGCATCTTATAAAACAA-GGGGAT-TATTTACACATGGATATGAACATATCATGCTCATCATAAGTTGCACAATTGATAACTCTCTGCATACACTGCTGCGCCATGGCGGAGCCGACAGAGTTCGTCTTCTCAAGAAGCCAAGAGGAATCAAGAGAAGG-AAAAAAAAACAAAGAGAGTAGAAATCACCAATTCAATTCACCATGTCACTAATTAAAAACTTGCTAGCTAATGTACTCGAGCTATATGTAATTTTATCAGGGCTCCAAAAATGTTACAGCTACTGTACTGTGCATGCAGAATTTTTTCGCAGTTGCAGTTCTTGCTTAATTTGCTAGTTCTCCGGTATGGCCACGAGCCGCGGCGCCCACGCGTCCCTGGCGCCACCGCCGCCGTGACCGTGGCCGTGGCCGCCGCGGAGCCCGGCGTTGAGCTCCACCATCTTGGCCTTCCTCTCGACAGCGCACCGCTCCTCCAGCCTCGCCATCAGCTCCGCCGCGTCCTTCCTCTTCATCACCACCTTCACCCGCATGCCGTCGCCGCCGTCGACGGCCGGCTCCACGTGGCACCCCGGCCACGCCATCCTCATCTCCTCCTCCTCCCCCGGCGTGTCTATCACCGGAACCACGTGCCTCGACGACGCCGCCGCCGCCGCCTTGCTGCTCCTGACAGCGGCGGTGGCCGGCGACTTCTTCCTCCTCTTCTTGACTCCCGAGGTGGCCACCGCCGTGGCCTCCTGGCACGGACATGGCAGCTGCAAGCTGTTGCCCATGCGACTACTACTAGATGCTTCTCTCTGTGTAGCTAAGCTTCGAGTGGAGAATCAATGGCGATGTGTGAGCTTTGAG] [+] EMBL CB682294 [TCTTTCTTTTTAAATAAAAACNCTGTTCTTTATCAAGCAAGGATGCATCTTATAAAACAA GGGGAT TATTTACACATGGATATGAACATATCATGCTCATCATAAGTTGCACAATTGATAACTCTCTGCATACACTGCTGCGCCATGGCGGAGCCGACAGAGTTCGTCTTCTCAAGAAGCCAAGAGGAATCAAGAGAAGG AAAAAAAAACAAAGAGAGTAGAAATCACCAATTCAATTCACCATGTCACTAATTAAAAACTTGCTAGCTAATGTACTCGAGCTATATGTAATTTTATCAGGGCTCCAAAAATGTTACAGCTACTGTACTGTGCATGCAGAATTTTTTCGCAGTTGCAGTTCTTGCTTAATTTGCTAGTTCTCCGGTATGGCCACGAGCCGCGGCGCCCACGCGTCCCTGGCGCCACCGCCGCCGTGACCGTGGCCGTGGCCGCCGCGGAGCCCGGCGTTGAGCTCCACCATCTTGGCCTTCCTCTCGACAGCGCACCGCTCCTCCAGCCTCGCCATCAGCTCCGCCGCGTCCTTCCTCTTCATCACCACCTTCACCCGCATGCCGTCGCCGCCGTCGACGGCCGGCTCCACGTGGCACCCCGGCCACGCCATCCTCATCTCCTCCTCCTCCCCCGGCGTGTCTATCACCGGAACCACGTGCCTCGACGACGCCGCCGCCGCCGCCTTGCTGCTCCTGACAGCGGCGGTGGCCGGCGACTTCTTCCTCCTCTTCTTGACTCCCGAGGTGGCCACCGCCGTGGCCTCCTGGCACGGACAT ] [+] EMBL CB685872 [ CATCTTATAAAACAAGGGGGATCCTTTTACACATGGATATGAACATATCATGCTCATCATAAGTTGCACAATTGATAACTCTCTGCATACACTGCTGCGCCATGGCGGAGCCGACAGAGTTCGTCTTCTCAAGAAGCCAAGAGGAATCAAGAGAAGG AAAAAAAAACAAAGAGAGTAGAAATCACCAATTCAATTCACCATGTCACTAATTAAAAACTTGCTAGCTAATGTACTCGAGCTATATGTAATTTTATCAGGGCTCCAAAAATGTTACAGCTACTGTACTGTGCATGCAGAATTTTTTCGCAGTTGCAGTTCTTGCTTAATTTGCTAGTTCTCCGGTATGGCCACGAGCCGCGGCGCCCACGCGTCCCTGGCGCCACCGCCGCCGTGACCGTGGCCGTGGCCGCCGCGGAGCCCGGCGTTGAGCTCCACCATCTTGGCCTTCCTCTCGACAGCGCACCGCTCCTCCAGCCTCGCCATCAGCTCCGCCGCGTCCTTCCTCTTCATCACCACCTTCACCCGCATGCCGTCGCCGCCGTCGACGGCCGGCTCCACGTGGCACCCCGGCCACGCCATCCTCATCTCCTCCTCCTCCCCCGGCGTGTCTATCACCGGAACCACGTGCCTCGACGACGCCGCCGCCGCCGCCTTGCTGCTCCTGACAGCGGCGGTGGCCGGCGACTTCTTCCTCCTCTTCTTGACTCCCGAGGTGGCCACCGC ] [-] EMBL CB682293 [ TCATAAGTGGCACAATTGATAACTCTCTGCATACACTGCTGCGCCATGGCGGAGCCGACAGAGTTCGTCTTCTCAAGAAGCCAAGAGGAATCAAGAGAAGG AAAAAAAAACAAAGAGAGTAGAAATCACCAATTCAATTCACCATGTCACTAATTAAAAACTTGCTAGCTAATGTACTCGAGCTATATGTAATTTTATCAGGGCTCCAAAAATGTTACAGCTACTGTACTGTGCATGCAGAATTTTTTCGCAGTTGCAGTTCTTGCTTAATTTGCTAGTTCTCCGGTATGGCCACGAGCCGCGGCGCCCACGCGTCCCTGGCGCCACCGCCGCCGTGACCGTGGCCGTGGCCGCCGCGGAGCCCGGCGTTGAGCTCCACCATCTTGGCCTTCCTCTCGACAGCGCACCGCTCCTCCAGCCTCGCCATCAGCTCCGCCGCGTCCTTCCTCTTCATCACCACCTTCACCCGCATGCCGTCGCCGCCGTCGACGGCCGGCTCCACGTGGCACCCCGGCCACGCCATCCTCATCTCCTCCTCCTCCCCCGGCGTGTCTATCACCGGAACCACGTGCCTCGACGACGCCGCCGCCGCCGCCTTGCTGCTCCTGACAGCGGCGGTGGCCGGCGACTTCTTCCTCCTCTTCTTGACTCCCGAGGTGGCCACCGCCGTGGCCTCCTGGCACGGACATGGCAGCTGCAAGCTGTTGCCCATGCGACTACTACTAGATGCTTCTCTCTGTGTAGCTAAGCTTCGAGTGGAGAATCAAGGGCG ] [-] EMBL AK069230 [ AGTTGCACAATTGATAACTCTCTGCATACACTGCTGCGCCATGGCGGAGCCGACAGAGTTCGTCTTCTCAAGAAGCCAAGAGGAATCAAGAGAAGGAAAAAAAAAACAAAGAGAGTAGAAATCACCAATTCAATTCACCATGTCACTAATTAAAAACTTGCTAGCTAATGTACTCGAGCTATATGTAATTTTATCAGGGCTCCAAAAATGTTACAGCTACTGTACTGTGCATGCAGAATTTTTTCGCAGTTGCAGTTCTTGCTTAATTTGCTAGTTCTCCGGTATGGCCACGAGCCGCGGCGCCCACGCGTCCCTGGCGCCACCGCCGCCGTGACCGTGGCCGTGGCCGCCGCGGAGCCCGGCGTTGAGCTCCACCATCTTGGCCTTCCTCTCGACAGCGCACCGCTCCTCCAGCCTCGCCATCAGCTCCGCCGCGTCCTTCCTCTTCATCACCACCTTCACCCGCATGCCGTCGCCGCCGTCGACGGCCGGCTCCACGTGGCACCCCGGCCACGCCATCCTCATCTCCTCCTCCTCCCCCGGCGTGTCTATCACCGGAACCACGTGCATCGACGACGCCGCCGCCGCCGCCTTGCTGCTCCTGACAGCGGCGGTGGCCGGCGACTTCTTCCTCCTCTTCTTGACTCCCGAGGTGGCCACCGCCGTGGCCTCCTGGCACGGACATGGCAGCTGCAAGCTGTTGCCCATGCGACTACTACTAGATGCTTCTCTCTGTGTAGCTAAGCTTCGAGTGGAGAATCAATGGCGATGTGTGAGCTTTGAG] [-] EMBL CB685871 [ gTATATGTAATAGTATCAGGGCTCCAAAAATGTTACAGCTACTGTACTGTGCATGCAGAATTTTTTGGCAGTTCCAGTTCTTGCATAATTTGATAGTTCTCAGGTATGGCCACGAGCCGAGGCGCCCACGCGTCCATGGCGCCGCCGCCGCCGTGACCGTGGCCGTGGCCGCCGCGGAGCCCGGCGTTGAGCTCCACCATCTTGGCCTTCCTCTGGACAGCGCGCCGCTCCTCCAGCCTGGCCATCAGCTCCGCGGCGTCCTTCGTGTTCATCACCACCTTCACCCGCATGCCGTCGCCGCCGTAGACGGCCGGCTCCACGTGGCACCCCGGCCACGCCATCCTCATCTCCTCCTCCTCCCCCGGCGTGTCTATCACCGGAACCACGTGCCTCGACGACGCCGCCGCCGCCGCCTTGCTGCTCCTGACAGCGGCGGTGGCCGGCGACTTCTTCCTCCTCTTCTTGACTCCCGAGGTGGCCACCGCCGTGGCCTCCTGGCACGGACATGGCAGCTGCAAGCTGTTGCCCATGCGACTACTACTAGATGCTTCTCTCTGTGTAGCTAAGCTTCGAGTGGAGAATCGATGG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||