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Oryza sativa
cluster # 8434 cluster # 8434       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8434#0 length = 2076 sequences # 5  

consensusID : consensus_8434#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2076
fasta sequence
                              [TCTATGATCTTCTACCTCTCTTCTCCCTCTTGCTGGAACATATAGCATCAGAATCCTCACTGGGCATCTTTCCTTTTCTTGCCATATCTGGCCATAGGCTACAATAAGAGTTCTTGCTTGCTTCTCCTCCTCCTCCTATCGCATTGTTCATACAGCTCTGATCAAGCTCTCTAAGCATCGATCACTTGGTTCTTGCTCATCATCTTTCGCTTGCTCGTCAGCTAGGAATTCGTAGTCTTGAGCCGAGGTTGGGTGATTCGATGGACATGAGCGAGAGCAGTGAGAAAGGAATGGAGAGCAATGCGTCGTCTGGCCCTGGCAATGGCATCCCGGTGGAGTGGCAGAGCCAATTCAGCAGCGCCTTCGCGTGCCAGCCGTCGGTGGCGGCGCAGCACCAGCAGCACGCCATGATGGACTCCTTCGCGGCGGCGTCCGCCGGCCTGTGGGCGTCCTCCGACGTCGTCAGCGCCATGTCATCGGCCGCGCCGCCGCGGGGCGCGGGGTTCTTGGCGCCGGTGCCCGGGTTCCTCCAGCAGGGGCTCGGCCATTTCCCGGTGGACTCCGGCTTCATCGAGCGCGCAGCGCGGTCGACGTGCTTCGGCGGCGGGATGATGGCCGGCGGCCCATACGGCGCAGCTGACCAGGCCATGGGCGACGCTTTCGGTGGCACCGCGGAGGGTCTCATGGATCATCACAGGAACGTTGGCAACGACAAGGCCGAGGAGTTCGCCGGCAACGGCCACGACGAGGTGCCGAGCTCGGAGGTAGCCGGTGGAGACTGCTCCTCCAAAGGTTCAGACTCCAAGAAGAGGAGAAGGCCTAACGAGGTGATGGGAACCGATCAAGTCCATTCTTCCAACTTGCCATCTGATTCTGCGAACGAGAGTGTTCACAGCAAAGACAAAGGCGAGGAGAGCAGCCCGGCGACGACGAACGGCGGCAAGTCGAAAGGGAAGGGAGCAAAGGAGACCTCTGAGTCACAGAAAGAAGAGTACATTCATGTCCGGGCTCGGCGTGGCCAGGCAACCAACAGCCACAGCTTAGCAGAAAGGTTGAGAAGGGAGAAGATCAGTGAGAGGATGAAACTTCTTCAGGACCTAGTTCCTGGCTGCAGCAAGGTCACCGGAAAAGCGGTGATGCTTGACGAGATCATCAACTATGTTCAGTCCCTGCAAAGACAAGTTGAGTTCTTATCGATGAAGCTTGCGACAGTAAACCCAAGGCTTGACCTCAACATAGAAGGGCTTCTTTCAAAAGACCTTCTTCGCTTCCCTGGAGTTCCTTCATCCTCTATCGGATTCTCCCCAGAAATGATGCATCCTCAACTACAATTGTCACAACCAGGACTGATTCATGGTGGTACCGCTGGCATGGCCAACCCCGATGTGTTCAGACGAATAATACAAGCGCAATTAGGTGCAAAGGATGGATCTCAGATGCCCCACTCATTGAATGGATCATTCAGTGACGTTTCCCAAATGGCGTACCCGTCCCTCGGTTCTCAGGACCTAAGCATCAGGCCATCTCAGGATGGGTTTCAAATGTGAAGAAGACGAAGAAGAAGAAGATGATGATGATGAGGGGGCCAATTCCATGTACGTGCAATTGCTTCTGGCATCTGGTGAACAAGGGCAGGCACACGCACATGACTGAAGCTTGCTACTACTGCTGGAGAAGCAGCGTTTGCAGTGCTGCTAGCTCATCGCGTAACTGAAGTCTGAAGGGCTTTTAATTCCTTCCGTGGCTAGCTGTATATCCATCGAGGTTTTATTGTGTTCAGAACTGAAACTGAAAGGCTTTTGAGCCCCCACGTACAGGGACGCTGGAAACGAAAAATCTGCGTCCTTGATGGCTGGAAATTCTGTCTGGGGAGCGTGCATTTACACTGCAGCACGAGGAGCAGCAGGCAGGCAGCTGAATTTGCTGCAGGGCTGGCACAATGCAAGATCACTCATCCGGTGGCTTTGTTAAGTTACTTCCGATGCATTGTTGGTTGCGAAAACGATTAAACAACTCATCATAAACGTGGCGCTGAATGGTGTTAATGTTAAGATCAAACACATTTGACTCCAAAAA]

[+] EMBL AK121418             [TCTATGATCTTCTACCTCTCTTCTCCCTCTTGCTGGAACATATAGCATCAGAATCCTCACTGGGCATCTTTCCTTTTCTTGCCATATCTGGCCATAGGCTACAATAAGAGTTCTTGCTTGCTTCTCCTCCTCCTCCTATCGCATTGTTCATACAGCTCTGATCAAGCTCTCTAAGCATCGATCACTTGGTTCTTGCTCATCATCTTTCGCTTGCTCGTCAGCTAGGAATTCGTAGTCTTGAGCCGAGGTTGGGTGATTCGATGGACATGAGCGAGAGCAGTGAGAAAGGAATGGAGAGCAATGCGTCGTCTGGCCCTGGCAATGGCATCCCGGTGGAGTGGCAGAGCCAATTCAGCAGCGCCTTCGCGTGCCAGCCGTCGGTGGCGGCGCAGCACCAGCAGCACGCCATGATGGACTCCTTCGCGGCGGCGTCCGCCGGCCTGTGGGCGTCCTCCGACGTCGTCAGCGCCATGTCATCGGCCGCGCCGCCGCGGGGCGCGGGGTTCTTGGCGCCGGTGCCCGGGTTCCTCCAGCAGGGGCTCGGCCATTTCCCGGTGGACTCCGGCTTCATCGAGCGCGCAGCGCGGTCGACGTGCTTCGGCGGCGGGATGATGGCCGGCGGCCCATACGGCGCAGCTGACCAGGCCATGGGCGACGCTTTCGGTGGCACCGCGGAGGGTCTCATGGATCATCACAGGAACGTTGGCAACGACAAGGCCGAGGAGTTCGCCGGCAACGGCCACGACGAGGTGCCGAGCTCGGAGGTAGCCGGTGGAGACTGCTCCTCCAAAGGTTCAGACTCCAAGAAGAGGAGAAGGCCTAACGAGGTGATGGGAACCGATCAAGTCCATTCTTCCAACTTGCCATCTGATTCTGCGAACGAGAGTGTTCACAGCAAAGACAAAGGCGAGGAGAGCAGCCCGGCGACGACGAACGGCGGCAAGTCGAAAGGGAAGGGAGCAAAGGAGACCTCTGAGTCACAGAAAGAAGAGTACATTCATGTCCGGGCTCGGCGTGGCCAGGCAACCAACAGCCACAGCTTAGCAGAAAGGTTGAGAAGGGAGAAGATCAGTGAGAGGATGAAACTTCTTCAGGACCTAGTTCCTGGCTGCAGCAAGGTCACCGGAAAAGCGGTGATGCTTGACGAGATCATCAACTATGTTCAGTCCCTGCAAAGACAAGTTGAGTTCTTATCGATGAAGCTTGCGACAGTAAACCCAAGGCTTGACCTCAACATAGAAGGGCTTCTTTCAAAAGACCTTCTTCGCTTCCCTGGAGTTCCTTCATCCTCTATCGGATTCTCCCCAGAAATGATGCATCCTCAACTACAATTGTCACAACCAGGACTGATTCATGGTGGTACCGCTGGCATGGCCAACCCCGATGTGTTCAGACGAATAATACAAGCGCAATTAGGTGCAAAGGATGGATCTCAGATGCCCCACTCATTGAATGGATCATTCAGTGACGTTTCCCAAATGGCGTACCCGTCCCTCGGTTCTCAGGACCTAAGCATCAGGCCATCTCAGGATGGGTTTCAAATGTGAAGAAGACGAAGAAGAAGAAGATGATGATGATGAGGGGGCCAATTCCATGTACGTGCAATTGCTTCTGGCATCTGGTGAACAAGGGCAGGCACACGCACATGACTGAAGCTTGCTACTACTGCTGGAGAAGCAGCGTTTGCAGTGCTGCTAGCTCATCGCGTAACTGAAGTCTGAAGGGCTTTTAATTCCTTCCGTGGCTAGCTGTATATCCATCGAGGTTTTATTGTGTTCAGAACTGAAACTGAAAGGCTTTTGAG CCCCACGTACAGGGACGCTGGAAACGAAAAATCTGCGTCCTTGATGGCTGGAAATTCTGTCTGGGGAGCGTGCATTTACACTGCAGCACGAGGAGCAGCAGGCAGGCAGCTGAATTTGCTGCAGGGCTGGCACAATGCAAGATCACTCATCCGGTGGCTTTGTTAAGTTACTTCCGATTCATTGTTGGTTGCGAAAACGATTAAACAACTCATCATAAACGTGGCGCTGAATGGTGTTAATGTTAAGATCAAACAC               ]
[+] EMBL AU225837             [                                                                                                       gccgctGTTCTTGCTTGCTTCTCCTCCTCCTCCTATCGCATTGTTCATACAGCTCTGATCAAGCTCTCTAAGCATCGATCACTTGGTTCTTGCTCATCATCTTTCGCTTGCTCGTCAGCTAGGAATTCGTAGTCTTGAGCCGAGGTTGGGTGATTCGATGGACATGAGCGAGAGCAGTGAGAAAGGAATGGAGAGCAATGCGTCGTCTGGCCCTGGCAATGGCATCCCGGTGGAGTGGCAGAGCCAATTCAGCAGCGCCTTCGCGTGCCAGCCGTCGGTGGCGGCGCAGCACCAGCAGCACGCCATGATGGACTCCTTCGCGGCGGCGTCCGCCGGCCTGTGGGCGTCCTCCGACGTCGTCAGCGCCATGTCATCGGCCGCGCCGCCGCGGGGCGCGGGGTTCTTGGCGCCGGTGCCCGGGTTCCTCCAGCAGGGGCTCGGCCATTTCCCGGTGGACTCCGGCTTCATCGAGCGCGCAGCGCGGTCGACGTGCTTCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB651370             [                                                                                                                                                                                                                                                   CGAGGTTGGGTGATTCGATGGACATGAGCGAGAGCAGTGAGAAAGGAATGGAGAGCAATGCGTCGTCTGGCCCTGGCAATGGCATCCCGGTGGAGTGGCAGAGCCAATTCAGCAGCGCCTTCGCGTGCCAGCCGTCGGTGGCGGCGCAGCACCAGCAGCACGCCATGATGGACTCCTTCGCGGCGGCGTCCGCCGGCCTGTGGGCGTCCTCCGACGTCGTCAGCGCCATGTCATCGGCCGCGCCGCCGCGGGGCGCGGGGTTCTTGGCGCCGGTGCCCGGGTTCCTCCAGCAGGGGCTCGGCCATTTCCCGGTGGACTCCGGCTTCATCGAGCGCGCAGCGCGGTCGACGTGCTTCGGCGGCGGGATGATGGCCGGCGGCCCATACGGCGCAGCTGACCAGGCCATGGGCGACGCTTTCGGTGGCACCGCGGAGGGTCTCATGGATCATCACAGGAACGTTGGCAACGACAAGGCCGAGGAGTTCGCCGGCAACGGCCACGACGAGGTGCCGAGCTCGGAGGTAGCCGGTGGAGACTGCTCCTCCAAAGGTTCAGACTCCAAGAAGAGGAGAAGGCCTAACGAGGTGATGGGAACCGATCAAGTCCATTCTTCCAACTTGCCATCTGATTCTGCGAACGAGAGTGTTCACAGCAAAGACAAAGGCGAGGAGAGCAGCCCGGCGACGACGAACGGCGGCAAGTCGAAAGGGAAGGGAGCAAAGGAGACCTCTGAGTCACAGAAAGAAGAGTACATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BP184716             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGACCTCTGAGTCACAGAAAGAAGAGTACATTCATGTCCGGGCTCGGCGTGGCCAGGCAACCAACAGCCACAGCTTAGCAGAAAGGTTGAGAAGGGAGAAGATCAGTGAGAGGATGAAACTTCTTCAGGACCTAGTTCCTGGCTGCAGCAAGGTCACCGGAAAAGCGGTGATGCTTGACGAGATCATCAACTATGTTCAGTCCCTGCAAAGACAAGTTGAGTTCTTATCGATGAAGCTTGCGACAGTAAACCCAAGGCTTGACCTCAACATAGAAGGGCTTCTTTCAAAAGACCTTCTTCGCTTCCCTGGAGTTCCTTCATCCTCTATCGGATTCTCCCCAGAAATGATGCATCCTCAACTACAATTGTCACAACCAGGACTGATTCATGGTGGTACCGCTGGCATGGCCAACCCCGATGTGTTCAGACGAATAATACAAGCGCAATTAGGTGCAAAGGATGGATCTCAGATGCCCCACTCATTGAATGGATCATTCAGTGACGTTTCCCAAATGGCGTACCCGTCCCTCGGTTCTCAGGACCTAAGCATCAGGCCATCTCAGGATGGGTTTCAAATGTGAAGAAGACGAAGAAGAAGAAGATGATGATGATGAGGGGGCCAATTCCATGTACGTGCAATTGCTTCTGGCATCTGGTGAACAAGGGCAGGCACACGCACATGACTGAAGCTTGCTACTACTGCTGGAGAAGCAGCGTTTGCAGTGCTGCTAGCTCATCGCGTAACTGAAGTCTGAAGGGCTTTTAATTCCTTCCGTGGCTAGCTGTATATCCATCGAGGTTTTATTGTGTTCAGAACTGAAACTGAAAGGCTTTTGAGCCCCCACGTACAGGGACGCTGGAAACGAAAAATCTGCGTCCTTGATGGCTGGAAATTCTGTCTGGGGAGCGTGCATTTACACTGCAGCACGAGGAGCAGCAGGCAGGCAGCTGAATTTGCTGCAGGGCTGGCACAATGCAAGATCACTCATCCGGTGGCTTTGTTAAGTTACTTCCGATGCATTGTTGGTTGCGAAAACGATTAAACAACTCATCATAAACGTGGCGCTGAATGGTGTTAATGTTAAGATCAAACACATTTGACTCCAAAAA]
[-] EMBL CB651371             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATGCATCCTCAACTACAATTGTCACAACCAGGACTGATTCATGGTGGTACCGCTGGCATGGCCAACCCCGATGTGTTCAGACGAATAATACAAGCGCAATTAGGTGCAAAGGATGGATCTCAGATGCCCCACTCATTGAATGGATCATTCAGTGACGTTTCCCAAATGGCGTACCCGTCCCTCGGTTCTCAGGACCTAAGCATCAGGCCATCTCAGGATGGGTTTCAAATGTGAAGAAGACGAAGAAGAAGAAGATGATGATGATGAGGGGGCCAATTCCATGTACGTGCAATTGCTTCTGGCATCTGGTGAACAAGGGCAGGCACACGCACATGACTGAAGCTTGCTACTACTGCTGGAGAAGCAGCGTTTGCAGTGCTGCTAGCTCATCGCGTAACTGAAGTCTGAAGGGCTTTTAATTCCTTCCGTGGCTAGCTGTATATCCATCGAGGTTTTATTGTGTTCAGAACTGAAACTGAAAGGCTTTTGAGCCCCCACGTACAGGGACGCTGGAAACGAAAAATCTGCGTCCTTGATGGCTGGAAATTCTGTCTGGGGAGCGTGCATTTACACTGCAGCACGAGGAGCAGCAGGCAGGCAGCTGAATTTGCTGCAGGGCTGGCACAATGCAAGATCACTCATCCGGTGGCTTTGTTAAGTTACTTCCGATGCATTGTTGGTTGCGAAAACGATTAAACAACTCATCATAAACGTGGCGCTGAATGGTGTTAATGTTAAGATCAAACACATTTGA         ]


>consensus_8434#0 TCTATGATCTTCTACCTCTCTTCTCCCTCTTGCTGGAACATATAGCATCAGAATCCTCAC TGGGCATCTTTCCTTTTCTTGCCATATCTGGCCATAGGCTACAATAAGAGTTCTTGCTTG CTTCTCCTCCTCCTCCTATCGCATTGTTCATACAGCTCTGATCAAGCTCTCTAAGCATCG ATCACTTGGTTCTTGCTCATCATCTTTCGCTTGCTCGTCAGCTAGGAATTCGTAGTCTTG AGCCGAGGTTGGGTGATTCGATGGACATGAGCGAGAGCAGTGAGAAAGGAATGGAGAGCA ATGCGTCGTCTGGCCCTGGCAATGGCATCCCGGTGGAGTGGCAGAGCCAATTCAGCAGCG CCTTCGCGTGCCAGCCGTCGGTGGCGGCGCAGCACCAGCAGCACGCCATGATGGACTCCT TCGCGGCGGCGTCCGCCGGCCTGTGGGCGTCCTCCGACGTCGTCAGCGCCATGTCATCGG CCGCGCCGCCGCGGGGCGCGGGGTTCTTGGCGCCGGTGCCCGGGTTCCTCCAGCAGGGGC TCGGCCATTTCCCGGTGGACTCCGGCTTCATCGAGCGCGCAGCGCGGTCGACGTGCTTCG GCGGCGGGATGATGGCCGGCGGCCCATACGGCGCAGCTGACCAGGCCATGGGCGACGCTT TCGGTGGCACCGCGGAGGGTCTCATGGATCATCACAGGAACGTTGGCAACGACAAGGCCG AGGAGTTCGCCGGCAACGGCCACGACGAGGTGCCGAGCTCGGAGGTAGCCGGTGGAGACT GCTCCTCCAAAGGTTCAGACTCCAAGAAGAGGAGAAGGCCTAACGAGGTGATGGGAACCG ATCAAGTCCATTCTTCCAACTTGCCATCTGATTCTGCGAACGAGAGTGTTCACAGCAAAG ACAAAGGCGAGGAGAGCAGCCCGGCGACGACGAACGGCGGCAAGTCGAAAGGGAAGGGAG CAAAGGAGACCTCTGAGTCACAGAAAGAAGAGTACATTCATGTCCGGGCTCGGCGTGGCC AGGCAACCAACAGCCACAGCTTAGCAGAAAGGTTGAGAAGGGAGAAGATCAGTGAGAGGA TGAAACTTCTTCAGGACCTAGTTCCTGGCTGCAGCAAGGTCACCGGAAAAGCGGTGATGC TTGACGAGATCATCAACTATGTTCAGTCCCTGCAAAGACAAGTTGAGTTCTTATCGATGA AGCTTGCGACAGTAAACCCAAGGCTTGACCTCAACATAGAAGGGCTTCTTTCAAAAGACC TTCTTCGCTTCCCTGGAGTTCCTTCATCCTCTATCGGATTCTCCCCAGAAATGATGCATC CTCAACTACAATTGTCACAACCAGGACTGATTCATGGTGGTACCGCTGGCATGGCCAACC CCGATGTGTTCAGACGAATAATACAAGCGCAATTAGGTGCAAAGGATGGATCTCAGATGC CCCACTCATTGAATGGATCATTCAGTGACGTTTCCCAAATGGCGTACCCGTCCCTCGGTT CTCAGGACCTAAGCATCAGGCCATCTCAGGATGGGTTTCAAATGTGAAGAAGACGAAGAA GAAGAAGATGATGATGATGAGGGGGCCAATTCCATGTACGTGCAATTGCTTCTGGCATCT GGTGAACAAGGGCAGGCACACGCACATGACTGAAGCTTGCTACTACTGCTGGAGAAGCAG CGTTTGCAGTGCTGCTAGCTCATCGCGTAACTGAAGTCTGAAGGGCTTTTAATTCCTTCC GTGGCTAGCTGTATATCCATCGAGGTTTTATTGTGTTCAGAACTGAAACTGAAAGGCTTT TGAGCCCCCACGTACAGGGACGCTGGAAACGAAAAATCTGCGTCCTTGATGGCTGGAAAT TCTGTCTGGGGAGCGTGCATTTACACTGCAGCACGAGGAGCAGCAGGCAGGCAGCTGAAT TTGCTGCAGGGCTGGCACAATGCAAGATCACTCATCCGGTGGCTTTGTTAAGTTACTTCC GATGCATTGTTGGTTGCGAAAACGATTAAACAACTCATCATAAACGTGGCGCTGAATGGT GTTAATGTTAAGATCAAACACATTTGACTCCAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)