These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8439#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3038 fasta sequence [CAAAGTCGAGATGAATTTGAAGGAGCCCCCCATCACCGGCGCCGGCGCTGGCGCGGCGGCTTCTCCGCCTGCTCCGAGCACCCTCCGGCGGAACCCTCCACGCAGCGCGAGGCCTCCCCCCACCCCTCTCCCCAATTCCAAACCCTCCCAGATCTCTCGCTTGCTCGAGGAGGCGGCGGAGCGGCTCAAGGTGTTCCTCCGCATCCGCCCCCTCCCGCTCCCGGAGCGCAAGGGCAAGGCCAAGTCCCCAACTAATCCCAAGCAAGTGTGCCTCGTCGCCAACTCCCCCAACTCCGTCGCGCTCACCGTCCCGCATTCCAAGCTCCTCGACCCCAAGCGCGGCCGCACCGAGGTCTTCGACGGCTTCTCCTCCGTCTTCTCACCCGATTCCTCACAGCATGATGTATTTAGTCAAGTGATGAATCCGCTGGTGGATGAC---TTGTTGGGAGGAAAGAGTGGCCTTCTGGTTGCAATGGGTCCCACTGGCTCTGGAAAGACCCATACTGTCTTTGGCTCCCCAAGGAATCCTGGACTTGTACCACTCACGCTACGCCGCATCTTCTCTCCAACAACACATGAACCCTTCAGCAAACTACGATCATTTTGCTTCTCAATGTTCGAGATACTTTCTGAGGGAAAAGGAGAGCGGATTCTTGACCTACTGTCTGATGCGACTGACCTTGTTCTCCAGCAGTCAACAATTAAAGGTCTTAAAGAGGTATCCGTTGAAAATTTTGCGGATGCTGAGGCCTTACTTTTATCTGGGATGCTGAAGCGTACCACAGCTGCAACAAATGCTAACAGCAAGTCAAGTCGATCGCAGTGCATTATCACTATACGTGCTGTTCATAAAAGCTCTGATGCAGAAAGTGAGAATTCGCTTAATAATGCTGTCCTGACCATAGCAGACCTTGCGGGGGCAGAGCGGGAAAGGAGAACTGGAAATCAAGGTACACGATTGCTAGAGAGTAATTTCATCAACAATACATCCATGGTTTTTGGTCTCTGTTTGAGGTCTTTGTTAGAGCATCAGAAAAACAAGAAGAAACCCTTGGAGAAGCACTTCAAGAACTCAATGTTGACAAGGTACTTGAGAGACTACCTGGAAGGAAGGAAGAAAATGACTCTGATTTTGAATGTGAAACCAGGAGATGATGATTATTTGGATACATCTTTTTTGCTAAGACAAGCATCTCCGTACATGAAAATAAAGTATACCAACCTTGAGGACTCTTCTGGATTGGTTTCCCAAAAGAGAAGCAGTGCTTCCCTGATTTGCCAAGAGAACACGAAAAAGAGGAAGATTCATAAGGTCGCAGGAAAGGATGACATTGATAAGGATGATGGTGTTACAATTTCTGAAAAAGATGAGTCACAGTACAAGCTTCTTAATTCAGAATTGCGAAGAGTTTCGAGAAATGAAGAAATAATGACAAACTTTGCCAGGGCTTTATGGACTGTTTTAAAGCAGTATAAACAAAAACTTTTGGAGTCTGAGAATGCTGTTGAGAGCACAAGAGAATTGCTTAGATCTAAAGACATCGAAATTATGGAGCTGGAGAAGAAGTTGAAGGTTCTAAGTTGTTCATGCAAGAAATTTCCAGCTGTTGAAGATACCTTTGTTGAGCAAAACAATGATGTGTCTTCTGGTCAAGTGGCTCAAAGTTTTGTTTCTCTATCAAGTCAAACTGATCTTGTATCTATTGACTCTGCTCTAAACAAATCTTTAGCAGTAGAAGAGGTCTCAGAAGAATCTACAGGTCATGGCCCTGAAAGGTCTTCAGATTATGATGACAAGACAGGGACAGGGGGATCTGATGTTTGTGATACTTCTATTATTAAGCTGATAGCGGAAGAAGAATTGTGCTCCGGAGATTGTAAGCCAGAGAAAGCAAGTAGTTCCGATGCTTTTATTCCTGAGCATGATGTGGAAAAAGAAAACATTGGGATAGTGGTACAGGTGCTTGATAAGAAGTTGGATAGGTCTGAAAGTTGCTCTGATGGTGGTGGTGTCACACATTCATCCAGTAGTTTGGATCATCCATCTGATCAAAGCTTTACAGATACATGCCTACAGAATGAAAGCGCAAACCTGTCTCCACAATTTATTGGTGCTAGCAAGAAATCTCCCATAGAGCAAAGTGAAGAAGAAAGGGAAGAGATACGCAATATAACAACGGAGGGGATTCAACAGAATGTTCACACAAGAGGGGTGAAACATCATAGTACTCCAAGTTGTTCCCAAGAAGTGAACTCTGGCTCATTACATGTTAGCTCCAGTCAGTTGCAAGGGATGGGTGCTCTTCAGCAGGATCCTCAGTCAGAAAGATGCAAGCCAACAGTAGAAATAACCATTGTGGAATATGGCTGTGCTCAACCTCCACATGTAGTGGATGATCATGGAGGCATGTATCCATGTACGCTAAATGGAAAATCTTCCCCAAGGAAAGCTCCAATATCTCCAACCAAGGACAATCAGGCTGAAAAACTGACAGATAAAATAGAGGATCTCTCTGCTTCTAAGCCTTGCAATAGAAAGAACACTAGAAGGAGATTGCAGCCTGTGTCAGCTATGATGCTCAAAGAATTCACAGGTCCTGATATATTTGTGGATACCAGAAAGGAAGAAAAAGTGAAATCGTCAAGAGATGCAATGGGGAGATCCGACAAGCTTATTCGACTGTTGACAGACCACCCAACCCGTGCCCGTGGACGAGCCCAGTAGTAGCTTCTTTCTTCTCTTTTGGTCGTGGAGGTGTCCTGAGCTGCCTCTCTACTTTCTTTCTTTCTTGTTTACAAGGTCGATCGGAAGATGTTATTTCGTAGGATGTTCACTCATTTTGCGGTACCAATCACGTACTACTACTTCCACGGTTGTCTTTTGCAGTACCTGCTTGTTCATCTTTTATCGACCTTTTGACGTGTGGGTACATGCGCCTGTGCTCATGCGAATATACATTTCTATGTAAATATGCACTCGTTGCGTATGCGCAATGCAGTTCAAATGTAAATAGGGAGGCAATTCTCGTCAAAAAAAA] [+] EMBL CB631397 [CAAAGTCGAGATGAATTTGAAGGAGCCCCCCATCACCGGCGCCGGCGCTGGCGCGGCGGCTTCTCCGCCTGCTCCGAGCACCCTCCGGCGGAACCCTCCACGCAGCGCGAGGCCTCCCCCCACCCCTCTCCCCAATTCCAAACCCTCCCAGATCTCTCGCTTGCTCGAGGAGGCGGCGGAGCGGCTCAAGGTGTTCCTCCGCATCCGCCCCCTCCCGCTCCCGGAGCGCAAGGGCAAGGCCAAGTCCCCAACTAATCCCAAGCAAGTGTGCCTCGTCGCCAACTCCCCCAACTCCGTCGCGCTCACCGTCCCGCATTCCAAGCTCCTCGACCCCAAGCGCGGCCGCACCGAGGTCTTCGACGGCTTCTCCTCCGTCTTCTCACCCGATTCCTCACAGCATGATGTATTTAGTCAAGTGATGAATCCGCTGGTGGATGAC TTGTTGGGAGGAAAGAGTGGCCTTCTGGTTGCAATGGGTCCCACTGGCTCTGGAAAGACCCATACTGTCTTTGGCTCCCCAAGGAATCCTGGACTTGTACCACTCACGCTACGCCGCATCTTCTCTCCAACAACACATGAACCCTTCAGCAAACTACGATCATTTTGCTTCTCAATGTTCGAGATACTTTCTGAGGGAAAAGGAGAGCGGATTCTTGACCTACTGTCTGATGCGACTGACCTTGTTCTCCAGCAGTCAACAATTAAAGGTCTTAAAGAGGTATCCGTTGAAAATTTTGCGGATGCTGAGGCCTTACTTTTATCTGGGATGCTGAAGCGTACCACAGCTGCAACAAATGCTAACAGCAAGTCAAGTCGATCGCAGTGCATTATCACTATACGTGCTGTTCATAAA ] [+] EMBL AK102833 [ CCCCCATCACCGGCGCCGGCGCTGGCGCGGCGGCTTCTCCGCCTGCTCCGAGCACCCTCCGGCGGAACCCTCCACGCAGCGCGAGGCCTCCCCCCACCCCTCTCCCCAATTCCAAACCCTCCCAGATCTCTCGCTTGCTCGAGGAGGCGGCGGAGCGGCTCAAGGTGTTCCTCCGCATCCGCCCCCTCCCGCTCCCGGAGCGCAAGGGCAAGGCCAAGTCCCCAACTAATCCCAAGCAAGTGTGCCTCGTCGCCAACTCCCCCAACTCCGTCGCGCTCACCGTCCCGCATTCCAAGCTCCTCGACCCCAAGCGCGGCCGCACCGAGGTCTTCGACGACTTCTCCTCCGTCTTCTCACCCGATTCCTCACAGAATGATGTATTTAGTCAAGTGATGAATCCGCTGGTGGATGACTTGTTGTTGGGAGGAAAGAGTGGCCTTCTGGTTGCAATGGGTCCCACTGGCTCTGGAAAGACCCATACTGTCTTTGGCTCCCCAAGGAATCCTGGACTTGTACCACTCACGCTACGCCGCATCTTCTCTCCAACAACACATGAACCCTTCAGCAAACTACGATCATTTTGCTTCTCAATGTTCGAGATACTTTCTGAGGGAAAAGGAGAGCGGATTCTTGACCTACTGTCTGATGCGACCGACCTTGTTCTCCAGCAGTCAACAATTAAAGGTCTTAAAGAGGTATCCGTTGAAAATTTTGCGGATGCTGAGGCCTTACTTTTTTCTGGGATGCTGAAGCGTACCACAGCTGCAACAAATGCTAACAGCAAGTCAAGTCGATCGCAGTGCATTATCACTATACGTGCTGTTCATAAAAGCTCTGATGCAGAAAGTGAGAATTCGCTTAATAATGCTGTCCTGACCATAGCAGACCTTGCGGGGGCAGAGCGGGAAAGGAGAACTGGAAATCAAGGTACACGATTGCTAGAGAGTAATTTCATCAACAATACATCCATGGTTTTTGGTCTCTGTTTGAGGTCTTTGTTAGAGCATCAGAAAAACAAGAAGAAACCCTTGGAGAAGCACTTCAAGAACTCAATGTTGACAAGGTACTTGAGAGACTACCTGGAAGGAAGGAAGAAAATGACTCTGATTTTGAATGTGAAACCAGGAGATGATGATTATTTGGATACATCTTTTTTGCTAAGACAAGCATCTCCGTACATGAAAATAAAGTATACCAACCTTGAGGACTCTTCTGGATTGGTTTCCCAAAAGAGAAGCAGTGCTTCCCTGATTTGCCAAGAGAACACGAAAAAGAGGAAGATTCATAAGGTCGCAGGAAAGGATGACATTGATAAGGATGATGGTGTTACAATTTCTGAAAAAGATGAGTCACAGTACAAGCTTCTTAATTCAGAATTGCGAAGAGTTTCGAGAAATGAAGAAATAATGACAAACTTTGCCAGGGCTTTATGGACTGTTTTAAAGCAGTATAAACAAAAACTTTTGGAGTCTGAGAATGCTGTTGAGAGCACAAGAGAATTGCTTAGATCTAAAGACATCGAAATTATGGAGCTGGAGAAGAAGTTGAAGGTTCTAAGTTGTTCATGCAAGAAATTTCCAGCTGTTGAAGATACCTTTGTTGAGCAAAACAATGATGTGTCTTCTGGTCAAGTGGCTCAAAGTTTTGTTTCTCTATCAAGTCAAACTGATCTTGTATCTATTGACTCTGCTCTAAACAAATCTTTAGCAGTAGAAGAGGTCTCAGAAGAATCTACAGGTCATGGCCCTGAAAGGTCTTCAGATTATGATGACAAGACAGGGACAGGGGGATCTGATGTTTGTGATACTTCTATTATTAAGCTGATAGCGGAAGAAGAATTGTGCTCCGGAGATTGTAAGCCAGAGAAAGCAAGTAGTTCCGATGCTTTTATTCCTGAGCATGATGTGGAAAAAGAAAACATTGGGATAGTGGTACAGGTGCTTGATAAGAAGTTGGATAGGTCTGAAAGTTGCTCTGATGGTGGTGGTGTCACACATTCATCCAGTAGTTTGGATCATCCATCTGATCAAAGCTTTACAGATACATGCCTACAGAATGAAAGCGCAAACCTGTCTCCACAATTTATTGGTGCTAGCAAGAAATCTCCCATAGAGCAAAGTGAAGAAGAAAGGGAAGAGATACGCAATATAACAACGGAGGGGATTCAACAGAATGTTCACACAAGAGGGGTGAAACATCATAGTACTCCAAGTTGTTCCCAAGAAGTGAACTCTGGCTCATTACATGTTAGCTCCAGTCAGTTGCAAGGGATGGGTGCTCTTCAGCAGGATCCTCAGTCAGAAAGATGCAAGCCAACAGTAGAAATAACCATTGTGGAATATGGCTGTGCTCAACCTCCACATGTAGTGGATGATCATGGAGGCATGTATCCATGTACGCTGAATGGAAAATCTTCCCCAAGGAAAGCTCCAATATCTCCAACCAAGGACAATCAGGCTGAAAAACTGACAGATAAAATAGAGGATCTCTCTGCTTCTAAGCCTTGCAATAGAAAGAACACTAGAAGGAGATTGCAGCCTGTGTCAGCTATGATGCTCAAAGAATTCACAGGTCCTGATATATTTGTGGATACCAGAAAGGAAGAAAAAGTGAAATCGTCAAGAGATGCAATGGGGAGATCCGACAAGCTTATTCGACTGTTGACAGACCACCCACCCCGTGCCCGTGGACGAGCCCAGTAGTAGCTTCTTTCTTCTCTTTTGGTCGTGGAGGTGTCCTGAGCTGCCTCTCTACTTTCTTTCTTTCTTGTTTACAAGGTCGATCGGAAGATGTTATTTCGTAGGATGTTCACTCATTTTGCGGTACCAATCACGTACTACTACTTCCACGGTTGTCTTTTGCAGTACCTGCTTGTTCATCTTTTATCGACCTTTTGACGTGTGGGTACATGCGCCTGTGCTCATGCGAATATACATTTCTATGTAAATATGCACTCGTTGCGTATGCGCAATGCAGTTCAAATGTAAATAGGGAGGCAATTC ] [+] EMBL CA999438 [ gcAAACAATGATGTGTCTTCTGGTCGAGTGGCTCAAAGTTTTGTTTCTCTATCAAGTCAAACTGATCTTGTATCTATTGACTCTGCTCTAAACAAATCTTTAGCAGTAGAAGAGGTCTCAGAAGAATCTACAGGTCATGGCCCTGAAAGGTCTTCAGATTATGATGACAAGACAGGGACAGGGGGATCTGATGTTTGTGATACTTCTATTATTAAGCTGATAGCGGAAGAAGAATTGTGCTCCGGAGATTGTAAGCCAGAGAAAGCAAGTAGTTCCGATGCTTTTATTCCTGAGCATGATGTGGAAAAAGAAAACATTGGGATAGTGGTACAGGTGCTTGATAAGAAGTTGGATAGGTCTGAAAGTTGCTCTGATGGTGGTGGTGTCACACATTCATCCAGTAGTTTGGATCATCCATCTGATCAAAGCTTTACAGATACATGCCTACAGAATGAAAGCGCAAACCTGTCTCCACAATTTATTGGTGCTAGCAAGAA ] [-] EMBL CB631398 [ GTTAGCTCCAGTCAGTTGCAAGGGATGGGTGCTCTTCAGCAGGATCCTCAGTCAGAAAGATGCAAGCCAACAGTAGAAATAACCATTGTGGAATATGGCTGTGCTCAACCTCCACATGTAGTGGATGATCATGGAGGCATGTATCCATGTACGCTAAATGGAAAATCTTCCCCAAGGAAAGCTCCAATATCTCCAACCAAGGACAATCAGGCTGAAAAACTGACAGATAAAATAGAGGATCTCTCTGCTTCTAAGCCTTGCAATAGAAAGAACACTAGAAGGAGATTGCAGCCTGTGTCAGCTATGATGCTCAAAGAATTCACAGGTCCTGATATATTTGTGGATACCAGAAAGGAAGAAAAAGTGAAATCGTCAAGAGATGCAATGGGGAGATCCGACAAGCTTATTCGACTGTTGACAGACCACCCAACCCGTGCCCGTGGACGAGCCCAGTAGTAGCTTCTTTCTTCTCTTTTGGTCGTGGAGGTGTCCTGAGCTGCCTCTCTACTTTCTTTCTTTCTTGTTTACAAGGTCGATCGGAAGATGTTATTTCGTAGGATGTTCACTCATTTTGCGGTACCAATCACGTACTACTACTTCCACGGTTGTCTTTTGCAGTACCTGCTTGTTCATCTTTTATCGACCTTTTGACGTGTGGGTACATGCGCCTGTGCTCATGCGAATATACATTTCTATGTAAATATGCACTCGTTGCGTATGCGCAATGCAGTTCAAATGTAAATAGGGAGGCAATTCT ] [-] EMBL CA760866 [ ATGTAGTGGATGATCAGGGAGGCATGTATCCATGTACGCTAAATGGAAAATCTTCCCCAAGGAAAGCTCCAATATCTCCAACCAAGGACAATCAGGCTGAAAAACTGACAGATAAAATAGA GATCTCTCTGCTTCTAAGCCTTGCAATAGAAAGAACACTAGAAGGAGATTGCAGCCTGTGTCAGCTATGATGCTCAAAGAATTCACAGGTCCTGATATATTTGTGGATACCAGAAAGGAAGAAAAAGTGAAATCGTCAAGAGATGCAATGGGGAGATCCGACAAGCTTATTCGACTGTTGACAGACCACCCAACCCGTGCCCGTGGACGAGCCCAGTAGTAGCTTCTTTCTTCTCTTTTGGTCGTGGAGGTGTCCTGAGCTGCCTCTCTACTTTCTTTCTTTCTTGTTTACAAGGTCGATCGGAAGATATTATTTCGTAGGATGTTCACTCATTTTGCGGTACCAATCACGTACTACTACTTCCACGGTTGTCTTTTGCAGTACCTGCTTGTTCATCTTTTATCGACCTTTTGACGTGTGGGTACATGCGCCTGTGCTCATGCGAATATACATTTCTATGTAAATATGCACTCGTTGCGTATGCGCAATGCAGTTCAAATGTAAATAGGGAGGCAATTCTCGTCAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||