These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_844#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 379 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAAAAAAAATTTATAAAAACTTTTTGGCGGGGGTTTTTGGACCCCCCGGGAAAAAAATTTTCCTTTAAGGGCGGACCACCTCTTTCATCCCAGTAGGGGCCCAGGGGCAATTTTTTTAAACCCGGGGGGACTACCCCTTTTAGGGGGGGTAAATTTGGACCTGGGGGAAATAAGGGCCAAAGCGGTTCCCGGGGGAAAATGGTTTCCCCTTAAAATTTCCCCAAAAAATACAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCTAAGGGGGGACCTACCCCCCTTTAATGGGGTGGCCCCCACGGCCCCTTTTCC] [+] EMBL CF337858 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAAAAAAAATTTATAAAAACTTTTTGGCGGGGGTTTTTGGACCCCCCGGGAAAAAAATTTTCCTTTAAGGGCGGACCACCTCTTTCATCCCAGTAGGGGCCCAGGGGCAATTTTTTTAAACCCGGGGGGACTACCCCTTTTAGGGGGGGTAAATTTGGACCTGGGGGAAATAAGGGCCAAAGCGGTTCCCGGGGGAAAATGGTTTCCCCTTAAAATTTCCCCAAAAAATACAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCTAAGGGGGGACCTACCCCCCTTTAATGGGGTGGCCCCCACGGCCCCTTTTCC] consensusID : consensus_844#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 333 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAACTAAAAACCCGGGGAAAAGGCAAAGGGTTTCTCCCCCTCCACCCCTGGGAAGGGCCCAGGGGCAAATTTTTTAAACCCGGGGGAACTACCCCTTTTAGGGGGGGTAAATTTGGACCTGGGGGAAATAAGGGCAAAACCGGTTCCCGGGGAAAAATGGTTTCCCCCTAAAATTCCCCAAAAAAATACAACCGGAAACCAAAAAGGGAAAACCCGGGGGGCCCTAAGGGGGGCCCCACCCCCCTTTATTGGGGGGGCCCCCCCGG] [+] EMBL CF331405 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAACTAAAAACCCGGGGAAAAGGCAAAGGGTTTCTCCCCCTCCACCCCTGGGAAGGGCCCAGGGGCAAATTTTTTAAACCCGGGGGAACTACCCCTTTTAGGGGGGGTAAATTTGGACCTGGGGGAAATAAGGGCAAAACCGGTTCCCGGGGAAAAATGGTTTCCCCCTAAAATTCCCCAAAAAAATACAACCGGAAACCAAAAAGGGAAAACCCGGGGGGCCCTAAGGGGGGCCCCACCCCCCTTTATTGGGGGGGCCCCCCCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_844#0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 60 consensus_844#1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 60 ************************************************************ consensus_844#0 CCAAAAAAAATTTATAAAAACTTTTTGGCGGGGGTTTTTGGACCCCCCGGGAAAAAAATT 120 consensus_844#1 TTTTTAAAAACT---AAAAAC-------------------------CCGGGGAAAAGGC- 91 ***** * ****** ***** **** consensus_844#0 TTCCTTTAAGGGCGGACCACCTCTTTCATCCCAGTAGGGGCCCAGGGGCAATTTTTTTAA 180 consensus_844#1 -------AAAGGGTTTCTCCCCCTCCACCCCTGGGAAGGGCCCAGGGGCAAATTTTTTAA 144 ** ** * ** ** ** * * ************** ******** consensus_844#0 ACCCGGGGGGACTACCCCTTTTAGGGGGGGTAAATTTGGACCTGGGGGAAATAAGGGCCA 240 consensus_844#1 ACCCGGGGGAACTACCCCTTTTAGGGGGGGTAAATTTGGACCTGGGGGAAATAAGGGCAA 204 ********* ************************************************ * consensus_844#0 AAGCGGTTCCCGGGGGAAAATGGTTTCCCCTTAAAATTTCCCCAAAAAATACAACCCGGA 300 consensus_844#1 AACCGGTTCCCGGGGAAAAATGGTTTCCCCCTAAAATTCCCCAAAAAAATACAACCGGAA 264 ** ************ ************** ******* *** ************* * * consensus_844#0 ACCATAAAGGGAAAACCCGGGGGGCCCTAAGGGGGGACCTACCCCCCTTTAATGGGGTGG 360 consensus_844#1 ACCAAAAAGGGAAAACCCGGGGGGCCCTAAGGGGGGCCCCACCCCCCTTTATTGGGGGGG 324 **** ******************************* ** *********** ***** ** consensus_844#0 CCCCCACGGCCCCTTTTCC 379 consensus_844#1 CCCCCCCGG---------- 333 ***** *** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||