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Oryza sativa
cluster # 8440 cluster # 8440       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8440#0 length = 1589 sequences # 5  

consensusID : consensus_8440#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1589
fasta sequence
                              [GAAGTCTTTCCATATCTGTAACTTAGCACAATTATACTATGTTAAGCTGATTAACCTTAAAATCTGAACTTTTTGGTGAATGACAAGGCGATAGATTGTCCTTGAGATAAGTTGGGACTTTTTGTTATGATGAACATGTCTCACTTCTGCCTTTTACTGCAGGCCATGGATTATAGCTGGTGGAAAGGTAATTGCTACAAAAATAAGAAATGCAACTCAGCTTCTGAGTTGTAAACTTGGAGAATTGGTTCCAGAAGCATGGAGGGAATGCCCAAACTGCAAATGTCACATTGATAATAGCGATGTTACTTTACAGTGGCCAGAATTCCCTGACGGTGTTAAATTTGATCCATCTGATCTTGAAGTACTTGAACATTTAGAAAGAAAAATTAACCTGGGAAATCCAGGGCCTCAGGGTCTTATTGATCACTTCATCCCAACTCTAGAAAAGGTGGAAGGAATCTGCTATACACATCCTGAAAATCTCCCCGGTATCAAGCTGGACGGCACCAGCAGCCATTTCTTCCACAGAATATCAAACGCATATGGTTCTGGTCAGCGCAAGCGTAGAAAGATCAGCCACACCGGCCATGCTGCTTCTGACGAGAACATAAGATGGCACAAAACTGGAAAATCCAACAGATTTACCATAACGGTGTCTTAAAAGGATGGAAGAAAATACTGGTTCTTTACAAAGGCTCCAAAAAGAACAAGATAGTACAAGCTAATTGGGTTATGCATCAATATAATCTTGGTGTGGAAGAAGGCGGGGAGGACGGAGAGCTTGTTGTTTCCAAGGTATTCTACCAATTATCCTCCAAGCAAACTGGCACGCCTGAAATGGACTCTGTTACTGAAG-AAGCATCTGATGCACTGACCATAAGAAGTGATCCCA-TTACACCCATAACGAACCCTCCGCTGCCTCGCTGCCTGATGAACAGCCCGTGTGACACGGAGCAGAATGGCACCATTTCACATGATCAGGAGGGGGAATGCAGCACATCCACTCTCCGGCCCATGGTAGAAGCTGGAAACCGTGCAGGGTGTTCTGCTGGAGCGTCAACAGCCGGGGACTTCAACGAAGATCTGCTGCAGCGCTGCGAGTTTCCGGAGGACCCCGTCCCAACTCTTGATGACACGCTGCCTTTTCTTTACACGGACGAAACGGACCTTTTCAGCTGGGAAGATTTTCAATTCGGGTCGCAGGAAAGCTTCGGCTGGGTGGATGGGGATCACACGTAAGTGATGCTCTGAGGAGTTGTGGGAAGCAGCGGTGCTGCAGGAAGACGCCTTCAGGGTTTAGGGTCTAGGGTTCGCCACTCTAGTGAGCTGCAACACTCTTTTAGAGCTGCAGCGCTTTTTATAAGAGTGACGAAATTTGGAGTGGTCAACCCTTCATATAACTGATCTCCGAAAATTTTGTATATGGATTTGCGTATTAACACCAGCTCTATGTAGCCGAGCAGTAAGTATAGTAGTCTCTCTTCCCCGTAAAAAAAAAAAAAAAAAAAAAATGTAGCATCTCAACCTGAAAATGTTCTGTGAGAACATGTTTATGTGTTGTAACCTTTGAACCTTGTTTAAAAAAA]

[+] EMBL AK108082             [GAAGTCTTTCCATATCTGTAACTTAGCACAATTATACTATGTTAAGCTGATTAACCTTAAAATCTGAACTTTTTGGTGAATGACAAGGCGATAGATTGTCCTTGAGATAAGTTGGGACTTTTTGTTATGATGAACATGTCTCACTTCTGCCTTTTACTGCAGGCCATGGATTATAGCTGGTGGAAAGGTAATTGCTACAAAAATAAGAAATGCAACTCAGCTTCTGAGTTGTAAACTTGGAGAATTGGTTCCAGAAGCATGGAGGGAATGCCCAAACTGCAAATGTCACATTGATAATAGCGATGTTACTTTACAGTGGCCAGAATTCCCTGACGGTGTTAAATTTGATCCATCTGATCTTGAAGTACTTGAACATTTAGAAAGAAAAATTAACCTGGGAAATCCAGGGCCTCAGGGTCTTATTGATCACTTCATCCCAACTCTAGAAAAGGTGGAAGGAATCTGCTATACACATCCTGAAAATCTCCCCGGTATCAAGCTGGACGGCACCAGCAGCCATTTCTTCCACAGAATATCAAACGCATATGGTTCTGGTCAGCGCAAGCGTAGAAAGATCAGCCACACCGGCCATGCTGCTTCTGACGAGAACATAAGATGGCACAAAACTGGAAAATCCAACAGATTTACCATAACGGTGTCTTAAAAGGATGGAAGAAAATACTGGTTCTTTACAAAGGCTCCAAAAAGAACAAGATAGTACAAGCTAATTGGGTTATGCATCAATATAATCTTGGTGTGGAAGAAGGCGGGGAGGACGGAGAGCTTGTTGTTTCCAAGGTATTCTACCAATTATCCTCCAAGCAAACTGGCACGCCTGAAATGGACTCTGTTACTGAAG AAGCATCTGATGCACTGACCATAAGAAGTGATCCCA TTACACCCATAACGAACCCTCCGCTGCCTCGCTGCCTGATGAACAGCCCGTGTGACACGGAGCAGAATGGCACCATTTCACATGATCAGGAGGGGGAATGCAGCACATCCACTCTCCGGCCCATGGTAGAAGCTGGAAACCGTGCAGGGTGTTCTGCTGGAGCGTCAACAGCCGGGGACTTCAACGAAGATCTGCTGCAGCGCTGCGAGTTTCCGGAGGACCCCGTCCCAACTCTTGATGACACGCTGCCTTTTCTTTACACGGACGAAACGGACCTTTTCAGCTGGGAAGATTTTCAATTCGGGTCGCAGGAAAGCTTCGGCTGGGTGGATGGGGATCACACGTAAGTGATGCTCTGAGGAGTTGTGGGAAGCAGCGGTGCTGCAGGAAGACGCCTTCAGGGTTTAGGGTCTAGGGTTCGCCACTCTAGTGAGCTGCAACACTCTTTTAGAGCTGCAGCGCTTTTTATAAGAGTGACGAAATTTGGAGTGGTCAACCCTTCATATAACTGATCTCCGAAAATTTTGTATATGGATTTGCGTATTAACACCAGCTCTATGTAGCCGAGCAGTAAGTATAGTAGTCTC                                                                                                           ]
[-] EMBL CB660451             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CATCAATATAATCTTGGTGTGGAAGAAGGCGGGGAGGACGGAGAGCTTGTTGTTTCCAAGGTATTCTACCAATTATCCTCCAAGCAAACTGGCACGCCTGAAATGGACTCTGTTACTGAAG AAGCATCTGATGCACTGACCATAAGAAGTGATCCCA TTACACCCATAACGAACCCTCCGCTGCCTCGCTGCCTGATGAACAGCCCGTGTGACACGGAGCAGAATGGCACCATTTCACATGATCAGGAGGGGGAATGCAGCACATCCACTCTCCGGCCCATGGTAGAAGCTGGAAACCGTGCAGGGTGTTCTGCTGGAGCGTCAACAGCCGGGGACTTCAACGAAGATCTGCTGCAGCGCTGCGAGTTTCCGGAGGACCCCGTCCCAACTCTTGATGACACGCTGCCTTTTCTTTACACGGACGAAACGGACCTTTTCAGCTGGGAAGATTTTCAATTCGGGTCGCAGGAAAGCTTCGGCTGGGTGGATGGGGATCACACGTAAGTGATGCTCTGAGGAGTTGTGGGAAGCAGCGGTGCTGCAGGAAGACGCCTTCAGGGTTTAGGGTCTAGGGTTCGCCACTCTAGTGAGCTGCAACACTCTTTTAGAGCTGCAGCGCTTTTTATAAGAGTGACGAAATTTGGAGTGGTCAACCCTTCATATAACTGATCTCCGAAAATTTTGTATAGGGATTTGCGTATTAACACCAGCTCTATG AGCCGAAAAGGAAGTATAGTAGTCTCT                                                                                                          ]
[-] EMBL CB660425             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATCTTGGT TGGAAGAAGGCGGGGAGGACGGAGAGCTTGTTGTTTCCAAGGTATTCTACCAATTATCCTCCAAGCAAACTGGCACGCCTGAAATGGACTCTGTTACTGAAG AAGCATCTGATGCACTGACCATAAGAAGTGATCCCA TTACACCCATAACGAACCCTCCGCTGCCTCGCTGCCTGATGAACAGCCCGTGTGACACGGAGCAGAATGGCACCATTTCACATGATCAGGAGGGGGAATGCAGCACATCCACTCTCCGGCCCATGGTAGAAGCTGGAAACCGTGCAGGGTGTTCTGCTGGAGCGTCAACAGCCGGGGACTTCAACGAAGATCTGCTGCAGCGCTGCGAGTTTCCGGAGGACCCCGTCCCAACTCTTGATGACACGCTGCCTTTTCTTTACACGGACGAAACGGACCTTTTCAGCTGGGAAGATTTTCAATTCGGGTCGCAGGAAAGCTTCGGCTGGGTGGATGGGGATCACACGTAAGTGATGCTCTGAGGAGTTGTGGGAAGCAGCGGTGCTGCAGGAAGACGCCTTCAGGGTTTAGGGTCTAGGGTTCGCCACTTTAGTGAGCTGCAACACTCTTTTAGAGCTGCAGCGCTTTTTATAAGAGTGACGAAATTTGGAGTGGTCAACCCTTCATATAACTGATCTCCGAAAATTTTGTAAGGGGATTTGCGTATTAA                                                                                                                                                   ]
[-] EMBL CA761288             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ctgGGCCCCCCTAAAATGGACTCTGTTACCGAAGAAAGCTTGTGATGCCCTGGCCATAAGAAGTGATCCCACTTCCACCCATAACGACCCCTCCGCTGCCTCGCTGCCTGATGAACAGCCCGTG GCCACGGAGCAGAATGGCCCCATTTCCCATGATCAGGAGGGGGAATGCAGCACATCCACTCTCCGGCCCATGGTAGAAGCTGGAAACCGTGCAGGGTGTTCTGCTGGAGCGTCAACAGCCGGGGACTTCAACGAAGATCTGCTGCAGCGCTGCGAGTTTCCGGAGGACCCCGTCCCAACTCTTGATGACACGCTGCCTTTTCTTTACACGGACGAAACGGACCTTTTCAGCTGGGAAGATTTTCAATTCGGATCGCAGGAAAGCTTTGGCTGGGTGGATGGGGATCACACGTAAGTGATGCTCTGAGGAGTTGTGGGAAGCAGCGGTGCTGCAGGAAGACGCCTTCAGGGTTTAGGGTCTAGGGTTCGCCACTCTAGTGAGCTGCAACACTCTTTTAGAGCTGCAGCGCTTTTTATAAGAGTGACGAAATTTGGAGTGGTCAACCCTTCATATAGCTGATCTCCGAAAATTTTGTATATGGATTTGCGTATTAACACCAGCTCTATGTAGCCGAGCAGTAAGTATAGTAGTCTCTCTTCCCCGTAAAAAAAAAAAAAA                                                                                   ]
[-] EMBL CA760880             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCCTGATGAACAGCCCGTGTGACACGGAGCAGAATGGCACCATTTCACATGATCAGGAGGGGGAATGCAGCACATCCACTTTCCGGCCCATGGTAGAAGCTGGAAACCGTGCAGGGTGTTCTGCTGGAGCGTCAACAGCCGGGGACTTCAACGAAGATCTGCTGCAGCGCTGCGAGTTTCCGGAGGACCCCGTCCCAACTCTTGATGACACGCTGCCTTTTCTTTACACGGACGAAACGGACCTTTTCAGCTGGGAAGATTTTCAATTCGGGTCGCAGGAAAGCTTCGGCTGGGTGGATGGGGATCACACGTAAGTGGTGCTCTGAGGAGTTGTGGGAAGCAGCGGTGCTGCAGGAAGACGCCTTCAGGGTTTAGGGTCTAGGGTTCGCCACTCTAGTGAGCTGCAACACTCTTTTAGAGCTGCAGCGCTTTTTATAAGAGTGACGAAATTTGGAGTGGTCAACCCTTCATATAACTGATCTCCGAAAATTTTGTATATGGATTTGCGTATTAACACCAGCTCTATGTAGCCGAGCAGTAAGTATAGTAGTCTCTCTTCCCCGTAAAAAAAAAAAAAGAAAAAAAATGTAGCATCTCAACCTGAAAATGTTCTGTGAGAACATGTTTATGTGTTGTAACCTTTGAACCTTGTTTAAAAAAA]


>consensus_8440#0 GAAGTCTTTCCATATCTGTAACTTAGCACAATTATACTATGTTAAGCTGATTAACCTTAA AATCTGAACTTTTTGGTGAATGACAAGGCGATAGATTGTCCTTGAGATAAGTTGGGACTT TTTGTTATGATGAACATGTCTCACTTCTGCCTTTTACTGCAGGCCATGGATTATAGCTGG TGGAAAGGTAATTGCTACAAAAATAAGAAATGCAACTCAGCTTCTGAGTTGTAAACTTGG AGAATTGGTTCCAGAAGCATGGAGGGAATGCCCAAACTGCAAATGTCACATTGATAATAG CGATGTTACTTTACAGTGGCCAGAATTCCCTGACGGTGTTAAATTTGATCCATCTGATCT TGAAGTACTTGAACATTTAGAAAGAAAAATTAACCTGGGAAATCCAGGGCCTCAGGGTCT TATTGATCACTTCATCCCAACTCTAGAAAAGGTGGAAGGAATCTGCTATACACATCCTGA AAATCTCCCCGGTATCAAGCTGGACGGCACCAGCAGCCATTTCTTCCACAGAATATCAAA CGCATATGGTTCTGGTCAGCGCAAGCGTAGAAAGATCAGCCACACCGGCCATGCTGCTTC TGACGAGAACATAAGATGGCACAAAACTGGAAAATCCAACAGATTTACCATAACGGTGTC TTAAAAGGATGGAAGAAAATACTGGTTCTTTACAAAGGCTCCAAAAAGAACAAGATAGTA CAAGCTAATTGGGTTATGCATCAATATAATCTTGGTGTGGAAGAAGGCGGGGAGGACGGA GAGCTTGTTGTTTCCAAGGTATTCTACCAATTATCCTCCAAGCAAACTGGCACGCCTGAA ATGGACTCTGTTACTGAAGAAGCATCTGATGCACTGACCATAAGAAGTGATCCCATTACA CCCATAACGAACCCTCCGCTGCCTCGCTGCCTGATGAACAGCCCGTGTGACACGGAGCAG AATGGCACCATTTCACATGATCAGGAGGGGGAATGCAGCACATCCACTCTCCGGCCCATG GTAGAAGCTGGAAACCGTGCAGGGTGTTCTGCTGGAGCGTCAACAGCCGGGGACTTCAAC GAAGATCTGCTGCAGCGCTGCGAGTTTCCGGAGGACCCCGTCCCAACTCTTGATGACACG CTGCCTTTTCTTTACACGGACGAAACGGACCTTTTCAGCTGGGAAGATTTTCAATTCGGG TCGCAGGAAAGCTTCGGCTGGGTGGATGGGGATCACACGTAAGTGATGCTCTGAGGAGTT GTGGGAAGCAGCGGTGCTGCAGGAAGACGCCTTCAGGGTTTAGGGTCTAGGGTTCGCCAC TCTAGTGAGCTGCAACACTCTTTTAGAGCTGCAGCGCTTTTTATAAGAGTGACGAAATTT GGAGTGGTCAACCCTTCATATAACTGATCTCCGAAAATTTTGTATATGGATTTGCGTATT AACACCAGCTCTATGTAGCCGAGCAGTAAGTATAGTAGTCTCTCTTCCCCGTAAAAAAAA AAAAAAAAAAAAAATGTAGCATCTCAACCTGAAAATGTTCTGTGAGAACATGTTTATGTG TTGTAACCTTTGAACCTTGTTTAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)