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Oryza sativa
cluster # 8443 cluster # 8443       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8443#0 length = 2394 sequences # 1  
consensus_8443#1 length = 1853 sequences # 4  

consensusID : consensus_8443#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2394
fasta sequence
                              [AGAGCGCTGGCGGCGAGCGGCGGCGCCGCCGCCGCAGCCGCCGCGCGCATGGCGGCACGGGGAGGTAGGAGGCGGAGCATGGAGGGGGAAGCTAGCTGCGCCCCGGCGCGACGGAGATGAGGAGGCGCAAGCACAAGCGCACCCACCGACTACCGCCGCGGCGAGCGCTCGAGAAAACAGAACAATGCAGCAAGGAGGAGACCAAGTCATTTTTTTGTGTCTGTTGGTGGGTCTGTGTGGAGGTGGGCATGCCAAGCCAACATAAGGTGCCAAATAGAACAATTTCAATGCATATGGAAGACAGTTCATTTTATAATTGATGCTGATGGACCCTTTCGCAAAGGAAGAAGACTTGCAATCCTGTGAAACAGAGTGTGGCAGGCAATTTCACCGGTCTGAACATATATTACTCAAAAGTTGGTTCAGTTACAGAATATCTGGAGAAATACCAGAGCTGGACGCACATTTATGGTCTTCAGGCTTGCAGTGCAATCTGTTTACATCATTATTTTCAACTAGTTTGGTGAGTTATTGTCTGCTGGGTACTCTTCGGTGAACCTGTGTGACCACAAATTGCTTCCTATTGATTCAACTCAGAAGGGAGGGAACATGGGAGAGGTAGTCAGTTCTGCCGTTGTTCATGAGACAGTGAACAAAATCATATCTGGCTTGATTGACAAGTATGAGCAAAATTCAAGTGCGGAGGAGCAGATGGAGAGGTTGGAGATGGCGCACATCAAGTTGGAGACTGCACTTGAGACATCCAGTAAGTGGCAGATCACTGGTGGGCCCTTGCAACGTTGGCAGAAGAAGCTGAAGCGTGCTGCTGAAGAGTGTGATGATACACTGCGCAAATGTAGGCAGCGCGTCCAAGAAGAAGAACAGGCTGAACAACAAGTAAGGAATTCCTCCTTACCTACGCGAGTTGCCCATGCCACCAAGTCACTGATATCATCCATCTTTCACGGCAATATCGACGAGCCGATTAGATCTGCTGTTCGAAGATTTGAATGGTTTGCTGATGGAGCTAATGACTTTCTGAGATCCGTGGAGTTTGGAGGGACACCACGTCGTTACTTGTTCTTTGACCCTCTTATCGGGCGCCTTCTTGCAGGCGAAACACTTGAGTACAAATTAGTGCAAGGAAACAATCAGCATTTGTTTTGGATACGGCCAAATAACACCGCAGAGCGAGGAGTAGAAGCTAAGTTGATCTTTGTTTACAATGATGAAAGTGTGCCTGTGAATAACTTTTTTCTAGGTATGATGCTACAACTTTCAGAGTGCACAAACATAGTTGGTACTGCAATTAAGTGCTTGCAGTTGTTTGCCCCTCATTTCAAGTCTACAACTGAAACTGTTAGGAAGGAACTTAGTCAACTACCTACACAGGACTTCTCATGGGTGCCACGTTCTCATTCATACCATTGGGACAGTATTCACAGTACAGTTACTGAATGGTTCCGCCCAAACCCAATGTGTTGCAAGCATCGTAGTCAGAAGGTATGTAGTAGTGGCAACATGGAGAAGACATATTTACCAGACATTTCTCTAGAATCAGTTATTGACGTGAGTTTGCAGTGCCAAGTTTCACTGCCTGGGTTAAAAGATCAGGTCACAGTTGTTGAGAGCAAACCTTCTCTCAAAGAATTTCCGCATCTGAAAGTTCACCTTGTCTATACGCCCCATGGCTCTTCAGAAGACCTATTCCCAGCAGTCGAGAGTTCTGTGATAGAGATGGTTAATGGTGTTGACCAACATTGCTTGCACACAAACATTGCCTTGGAACAAATGGAAGGGATCATGCTGCCAAGGGCTGTAGATTGTTTTCGTCAGAATGCAGGAACAACAGTGTATCAGATGGTTTGGAAGTCCAAACATGGTGGTGCATATCTTCAGGCTGTGAAGGTATCCAAGAACATGCTGAGGCAGAGAACCATTCGAGGAGCCAAGAAAGCGAAGCTATTGCGACGACATGATCATTGGACACAGAGTCGCATAGATGTGATCTCTGATTTCTTAAATCTTTGGGCTGCGCATGCGCCTGTCCAGCTGCAGGGCTCAATCCTCGATTGGACTCAGAAAGAAAAGGAAGCACAGTTAGCACCTCATCTACTACATCTGAAATTTTAGATCATGTAATAGGGACTTGTCAGGGAAATAGGGATACTTCAAAGAATGAAAATGTACTACCCCGTCACAAAATATAAGCACTTTTAGCTAAGAATATGGATAAAAATGCTTATATTTTGGGACAAAGGGAGTAATATTCTAGCAGGGGAAGTGACTTAGGGAGTTATCTCCAAGTTATTAGGAGTGTATTGATCTGAAATGTGTGCTCCATATATTTGCTGCTGCTGTTTGCGCAGCGCAGAACTTAGTAAATGGTGATAA]

[+] EMBL AK073714             [AGAGCGCTGGCGGCGAGCGGCGGCGCCGCCGCCGCAGCCGCCGCGCGCATGGCGGCACGGGGAGGTAGGAGGCGGAGCATGGAGGGGGAAGCTAGCTGCGCCCCGGCGCGACGGAGATGAGGAGGCGCAAGCACAAGCGCACCCACCGACTACCGCCGCGGCGAGCGCTCGAGAAAACAGAACAATGCAGCAAGGAGGAGACCAAGTCATTTTTTTGTGTCTGTTGGTGGGTCTGTGTGGAGGTGGGCATGCCAAGCCAACATAAGGTGCCAAATAGAACAATTTCAATGCATATGGAAGACAGTTCATTTTATAATTGATGCTGATGGACCCTTTCGCAAAGGAAGAAGACTTGCAATCCTGTGAAACAGAGTGTGGCAGGCAATTTCACCGGTCTGAACATATATTACTCAAAAGTTGGTTCAGTTACAGAATATCTGGAGAAATACCAGAGCTGGACGCACATTTATGGTCTTCAGGCTTGCAGTGCAATCTGTTTACATCATTATTTTCAACTAGTTTGGTGAGTTATTGTCTGCTGGGTACTCTTCGGTGAACCTGTGTGACCACAAATTGCTTCCTATTGATTCAACTCAGAAGGGAGGGAACATGGGAGAGGTAGTCAGTTCTGCCGTTGTTCATGAGACAGTGAACAAAATCATATCTGGCTTGATTGACAAGTATGAGCAAAATTCAAGTGCGGAGGAGCAGATGGAGAGGTTGGAGATGGCGCACATCAAGTTGGAGACTGCACTTGAGACATCCAGTAAGTGGCAGATCACTGGTGGGCCCTTGCAACGTTGGCAGAAGAAGCTGAAGCGTGCTGCTGAAGAGTGTGATGATACACTGCGCAAATGTAGGCAGCGCGTCCAAGAAGAAGAACAGGCTGAACAACAAGTAAGGAATTCCTCCTTACCTACGCGAGTTGCCCATGCCACCAAGTCACTGATATCATCCATCTTTCACGGCAATATCGACGAGCCGATTAGATCTGCTGTTCGAAGATTTGAATGGTTTGCTGATGGAGCTAATGACTTTCTGAGATCCGTGGAGTTTGGAGGGACACCACGTCGTTACTTGTTCTTTGACCCTCTTATCGGGCGCCTTCTTGCAGGCGAAACACTTGAGTACAAATTAGTGCAAGGAAACAATCAGCATTTGTTTTGGATACGGCCAAATAACACCGCAGAGCGAGGAGTAGAAGCTAAGTTGATCTTTGTTTACAATGATGAAAGTGTGCCTGTGAATAACTTTTTTCTAGGTATGATGCTACAACTTTCAGAGTGCACAAACATAGTTGGTACTGCAATTAAGTGCTTGCAGTTGTTTGCCCCTCATTTCAAGTCTACAACTGAAACTGTTAGGAAGGAACTTAGTCAACTACCTACACAGGACTTCTCATGGGTGCCACGTTCTCATTCATACCATTGGGACAGTATTCACAGTACAGTTACTGAATGGTTCCGCCCAAACCCAATGTGTTGCAAGCATCGTAGTCAGAAGGTATGTAGTAGTGGCAACATGGAGAAGACATATTTACCAGACATTTCTCTAGAATCAGTTATTGACGTGAGTTTGCAGTGCCAAGTTTCACTGCCTGGGTTAAAAGATCAGGTCACAGTTGTTGAGAGCAAACCTTCTCTCAAAGAATTTCCGCATCTGAAAGTTCACCTTGTCTATACGCCCCATGGCTCTTCAGAAGACCTATTCCCAGCAGTCGAGAGTTCTGTGATAGAGATGGTTAATGGTGTTGACCAACATTGCTTGCACACAAACATTGCCTTGGAACAAATGGAAGGGATCATGCTGCCAAGGGCTGTAGATTGTTTTCGTCAGAATGCAGGAACAACAGTGTATCAGATGGTTTGGAAGTCCAAACATGGTGGTGCATATCTTCAGGCTGTGAAGGTATCCAAGAACATGCTGAGGCAGAGAACCATTCGAGGAGCCAAGAAAGCGAAGCTATTGCGACGACATGATCATTGGACACAGAGTCGCATAGATGTGATCTCTGATTTCTTAAATCTTTGGGCTGCGCATGCGCCTGTCCAGCTGCAGGGCTCAATCCTCGATTGGACTCAGAAAGAAAAGGAAGCACAGTTAGCACCTCATCTACTACATCTGAAATTTTAGATCATGTAATAGGGACTTGTCAGGGAAATAGGGATACTTCAAAGAATGAAAATGTACTACCCCGTCACAAAATATAAGCACTTTTAGCTAAGAATATGGATAAAAATGCTTATATTTTGGGACAAAGGGAGTAATATTCTAGCAGGGGAAGTGACTTAGGGAGTTATCTCCAAGTTATTAGGAGTGTATTGATCTGAAATGTGTGCTCCATATATTTGCTGCTGCTGTTTGCGCAGCGCAGAACTTAGTAAATGGTGATAA]


>consensus_8443#0 AGAGCGCTGGCGGCGAGCGGCGGCGCCGCCGCCGCAGCCGCCGCGCGCATGGCGGCACGG GGAGGTAGGAGGCGGAGCATGGAGGGGGAAGCTAGCTGCGCCCCGGCGCGACGGAGATGA GGAGGCGCAAGCACAAGCGCACCCACCGACTACCGCCGCGGCGAGCGCTCGAGAAAACAG AACAATGCAGCAAGGAGGAGACCAAGTCATTTTTTTGTGTCTGTTGGTGGGTCTGTGTGG AGGTGGGCATGCCAAGCCAACATAAGGTGCCAAATAGAACAATTTCAATGCATATGGAAG ACAGTTCATTTTATAATTGATGCTGATGGACCCTTTCGCAAAGGAAGAAGACTTGCAATC CTGTGAAACAGAGTGTGGCAGGCAATTTCACCGGTCTGAACATATATTACTCAAAAGTTG GTTCAGTTACAGAATATCTGGAGAAATACCAGAGCTGGACGCACATTTATGGTCTTCAGG CTTGCAGTGCAATCTGTTTACATCATTATTTTCAACTAGTTTGGTGAGTTATTGTCTGCT GGGTACTCTTCGGTGAACCTGTGTGACCACAAATTGCTTCCTATTGATTCAACTCAGAAG GGAGGGAACATGGGAGAGGTAGTCAGTTCTGCCGTTGTTCATGAGACAGTGAACAAAATC ATATCTGGCTTGATTGACAAGTATGAGCAAAATTCAAGTGCGGAGGAGCAGATGGAGAGG TTGGAGATGGCGCACATCAAGTTGGAGACTGCACTTGAGACATCCAGTAAGTGGCAGATC ACTGGTGGGCCCTTGCAACGTTGGCAGAAGAAGCTGAAGCGTGCTGCTGAAGAGTGTGAT GATACACTGCGCAAATGTAGGCAGCGCGTCCAAGAAGAAGAACAGGCTGAACAACAAGTA AGGAATTCCTCCTTACCTACGCGAGTTGCCCATGCCACCAAGTCACTGATATCATCCATC TTTCACGGCAATATCGACGAGCCGATTAGATCTGCTGTTCGAAGATTTGAATGGTTTGCT GATGGAGCTAATGACTTTCTGAGATCCGTGGAGTTTGGAGGGACACCACGTCGTTACTTG TTCTTTGACCCTCTTATCGGGCGCCTTCTTGCAGGCGAAACACTTGAGTACAAATTAGTG CAAGGAAACAATCAGCATTTGTTTTGGATACGGCCAAATAACACCGCAGAGCGAGGAGTA GAAGCTAAGTTGATCTTTGTTTACAATGATGAAAGTGTGCCTGTGAATAACTTTTTTCTA GGTATGATGCTACAACTTTCAGAGTGCACAAACATAGTTGGTACTGCAATTAAGTGCTTG CAGTTGTTTGCCCCTCATTTCAAGTCTACAACTGAAACTGTTAGGAAGGAACTTAGTCAA CTACCTACACAGGACTTCTCATGGGTGCCACGTTCTCATTCATACCATTGGGACAGTATT CACAGTACAGTTACTGAATGGTTCCGCCCAAACCCAATGTGTTGCAAGCATCGTAGTCAG AAGGTATGTAGTAGTGGCAACATGGAGAAGACATATTTACCAGACATTTCTCTAGAATCA GTTATTGACGTGAGTTTGCAGTGCCAAGTTTCACTGCCTGGGTTAAAAGATCAGGTCACA GTTGTTGAGAGCAAACCTTCTCTCAAAGAATTTCCGCATCTGAAAGTTCACCTTGTCTAT ACGCCCCATGGCTCTTCAGAAGACCTATTCCCAGCAGTCGAGAGTTCTGTGATAGAGATG GTTAATGGTGTTGACCAACATTGCTTGCACACAAACATTGCCTTGGAACAAATGGAAGGG ATCATGCTGCCAAGGGCTGTAGATTGTTTTCGTCAGAATGCAGGAACAACAGTGTATCAG ATGGTTTGGAAGTCCAAACATGGTGGTGCATATCTTCAGGCTGTGAAGGTATCCAAGAAC ATGCTGAGGCAGAGAACCATTCGAGGAGCCAAGAAAGCGAAGCTATTGCGACGACATGAT CATTGGACACAGAGTCGCATAGATGTGATCTCTGATTTCTTAAATCTTTGGGCTGCGCAT GCGCCTGTCCAGCTGCAGGGCTCAATCCTCGATTGGACTCAGAAAGAAAAGGAAGCACAG TTAGCACCTCATCTACTACATCTGAAATTTTAGATCATGTAATAGGGACTTGTCAGGGAA ATAGGGATACTTCAAAGAATGAAAATGTACTACCCCGTCACAAAATATAAGCACTTTTAG CTAAGAATATGGATAAAAATGCTTATATTTTGGGACAAAGGGAGTAATATTCTAGCAGGG GAAGTGACTTAGGGAGTTATCTCCAAGTTATTAGGAGTGTATTGATCTGAAATGTGTGCT CCATATATTTGCTGCTGCTGTTTGCGCAGCGCAGAACTTAGTAAATGGTGATAA



consensusID : consensus_8443#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1853
fasta sequence
                              [AATCACTGATCTGTCCCTTTATTACATTGGGCATAGTGATATGTGATCGAGTCCTAATGGCAGAGATTGTTAGTTCTGTGGTTGTTCATGAGGCAGTCAACCAAATCATACATGGCTTGGTGAACTGGAATGAGCGAAAATCAAGCGCAGAGGAGAACATGGAGAGGCTTGAGATGGCACACATCAGGTTGGAGGCTGCACTTGAGACATCCTGTAAGTGGCGAATCACTGATTCTTCATTACTGTGTTGGCAGAAGAAGCTGAAGCGTGCTGCTCAAGAGTGCGATGACACACTGCGCAAATGCCGGCAACGCATCCTGGAACAAGAAGAGGCAGAACAAGAAGTAAGGAATTCCTCTATTCCTAGACGAATAGCCCATGCCACCAAGTCATTAGTGTCCTCCTTATTTTACAGCAATATCGATGGCTCATGTAGATCTGCTGTTCGAAGATTTGAGTGGTTTGCAGATGGAGCTAATGAGTTTTTGAGATTTGTGGAGTTTGGAGGAACACCACATCAGTACTTGTTCTTTGATCCTCTTATCAGGCAACTTCTTGCAGGCAAAACACTAGAGTATAAATTAGTGTCTGAAAATAAGTACCGGTTGTTTGTCATACGGCCCTTCTGTATTTCAGAGAATAGAATAGAGGCTAGGCTGATCTTTGACAGTAAAAATGCTAGTGCACTGGAGGATGATTTTTTCCTGTGTATGCTGCTACAAGTTTCAGAGAGTGTGGACATACTTGGCATTGTAATCAAGTGCTTGCAGCTGTTTAATCCCCATTTCATGTCTACAGCTGAATCTGTTAGGAATGAACTTACTCAGCTACCTTCACAAGATTTCACCTGGGTGCCATATGCTGAATCATGCCACAAAAAACACTGGGATAATATTCACAGCATTACTACCCAATGGTTTCGCCCTAACCCATTATGCTGCAAGCAGCATGGTCAGAACCACAGCTGTGAAAGTAGCAATCTAGGAATGCCATCTGTACAGGGTGTTTCTCTAGGACCAGTTATTGAAGTGAGTTTGCAGTGCCATGTCCCAGTTCCTGAGTTCAGAGAACAGGGAACAATTGTCAAAGG-CAAGCCTTCTCTTAAAAAATGCCCGCATATGAAAGTTGACCTT-GTCTACACACCCCATGGCTCATCACAAGACCTACTCCCAGAAATCAAGAGTTCTGTAATAGAGGTAATTAATGGTGATAAGCAACATTGCTTGCACACAAACATTGCCTTGGAACTAATGGAAGAGATCAT-GCTGCCAAGGGCAGTAGATTGTTTTCATGAGAATGCAGAAGCGAAATTGTATCAGATGCTTTGGAAGTCTAAACATGGTGGTGCATATCTTCAGGTTATGAAGGCAACCATGAACACTCGGAGCACACAGAGAACCATTCGAGGATCTAGGAAAGCGAAGCTGTTGCAACAGCAGGGTCATAAAACACAGCATCGTACAAATGCAATCTCTGACTTCCTCAACCTTTGGTCTGCACATGCGCCTGTCCAGCTGCAGGGCTCAATCCTCGATTGGATTCAGAAAGAGAAGGAAGCACAATTAGCACCTCCTCTACTGCGCCTGAAATTTTAGATCATGTAACAGGGACTGGTCAAGAAAACACGGATAATTAAATGAATGGAAATGTAATATTCTAGCAGAGAAAAGTAACTCATACGGAGTTGATTTCTAAGTCATTAGGAGTGTATTGATATGAAATGTGTGCTACATATGCTGCTGCTGTTGGTCTAACTCAAAACTTATGTTTGTAAATGATGATAACATGATGTTCATTCTCTGGTAATATAATGTACAGTTTCATCATTGGAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK072975             [AATCACTGATCTGTCCCTTTATTACATTGGGCATAGTGATATGTGATCGAGTCCTAATGGCAGAGATTGTTAGTTCTGTGGTTGTTCATGAGGCAGTCAACCAAATCATACATGGCTTGGTGAACTGGAATGAGCGAAAATCAAGCGCAGAGGAGAACATGGAGAGGCTTGAGATGGCACACATCAGGTTGGAGGCTGCACTTGAGACATCCTGTAAGTGGCGAATCACTGATTCTTCATTACTGTGTTGGCAGAAGAAGCTGAAGCGTGCTGCTCAAGAGTGCGATGACACACTGCGCAAATGCCGGCAACGCATCCTGGAACAAGAAGAGGCAGAACAAGAAGTAAGGAATTCCTCTATTCCTAGACGAATAGCCCATGCCACCAAGTCATTAGTGTCCTCCTTATTTTACAGCAATATCGATGGCTCATGTAGATCTGCTGTTCGAAGATTTGAGTGGTTTGCAGATGGAGCTAATGAGTTTTTGAGATTTGTGGAGTTTGGAGGAACACCACATCAGTACTTGTTCTTTGATCCTCTTATCAGGCAACTTCTTGCAGGCAAAACACTAGAGTATAAATTAGTGTCTGAAAATAAGTACCGGTTGTTTGTCATACGGCCCTTCTGTATTTCAGAGAATAGAATAGAGGCTAGGCTGATCTTTGACAGTAAAAATGCTAGTGCACTGGAGGATGATTTTTTCCTGTGTATGCTGCTACAAGTTTCAGAGAGTGTGGACATACTTGGCATTGTAATCAAGTGCTTGCAGCTGTTTAATCCCCATTTCATGTCTACAGCTGAATCTGTTAGGAATGAACTTACTCAGCTACCTTCACAAGATTTCACCTGGGTGCCATATGCTGAATCATGCCACAAAAAACACTGGGATAATATTCACAGCATTACTACCCAATGGTTTCGCCCTAACCCATTATGCTGCAAGCAGCATGGTCAGAACCACAGCTGTGAAAGTAGCAATCTAGGAATGCCATCTGTACAGGGTGTTTCTCTAGGACCAGTTATTGAAGTGAGTTTGCAGTGCCATGTCCCAGTTCCTGAGTTCAGAGAACAGGGAACAATTGTCAAAGG CAAGCCTTCTCTTAAAAAATGCCCGCATATGAAAGTTGACCTT GTCTACACACCCCATGGCTCATCACAAGACCTACTCCCAGAAATCAAGAGTTCTGTAATAGAGGTAATTAATGGTGATAAGCAACATTGCTTGCACACAAACATTGCCTTGGAACTAATGGAAGAGATCAT GCTGCCAAGGGCAGTAGATTGTTTTCATGAGAATGCAGAAGCGAAATTGTATCAGATGCTTTGGAAGTCTAAACATGGTGGTGCATATCTTCAGGTTATGAAGGCAACCATGAACACTCGGAGCACACAGAGAACCATTCGAGGATCTAGGAAAGCGAAGCTGTTGCAACAGCAGGGTCATAAAACACAGCATCGTACAAATGCAATCTCTGACTTCCTCAACCTTTGGTCTGCACATGCGCCTGTCCAGCTGCAGGGCTCAATCCTCGATTGGATTCAGAAAGAGAAGGAAGCACAATTAGCACCTCCTCTACTGCGCCTGAAATTTTAGATCATGTAACAGGGACTGGTCAAGAAAACACGGATAATTAAATGAATGGAAATGTAATATTCTAGCAGAGAAAAGTAACTCATACGGAGTTGATTTCTAAGTCATTAGGAGTGTATTGATATGAAATGTGTGCTACATATGCTGCTGCTGTTGGTCTAACTCAAAACTTATGTTTGTAAATGATGATAACATGATGT                                                             ]
[+] EMBL C74893               [AATCACTGATNTGTCCCTTTATTACATTGGGCATAGTGATATGTGATCGAGTCCTAATGGCAGAGATTGTTAGTTCTGTGGTTGTTCATGAGGCAGTCAANCAAATCATACATGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU089714             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTTTCAGAGAGTGTGGACATACTTGGCATTGTAATCAAGTGCTTGCAGCTGTTTAATCCCCATTTCATGTCTACAGCTGAATCTGTTAGGAATGAACTTACTCAGCTACCTTCACAAGATTTCACCTGGGTGCCATATGCTGAATCATGCCACAAAAAACACTGGGATAATATTCACAGCATTACTACCCAATGGTTTCGCCCTAACCCATTATGCTGCAA NAGCATGGTCAGAACCACAGCTGTGAAAGTAGCAATCTAGGAATGCCATCTGTACAGGGTGTTTCTCTAGGACCAGTTATTGAAGTGAGTTTGCAGTGCCATGTCCCAGTTCCTGAGTTCAGAGACCAGGGAACNATTGTCAAAGGCCAAGCCTTCTCTTAAAAAATGCCCGCATATGAAAGTTGACCTTGGTCTACACACCCCATGGCTCATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU030733             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATTGCTTGCACACAAACATTGCCTTGGAACTAATGGAAGAGATCATGGCTGCCAAGGGCAGTAGATTGTTTTCATGAGAATGCAGAAGCGAAATTGTATCAGATGCTTTGGAAGTCTAAACATGGTGGTGCATATCTTCAGGTTATGAAGGCAACCATGAACACTCGGAGCACACAGAGAACCATTCGAGGATCTAGGAAAGCGAAGCTGTTGCAACAGCAGGGTCATAAAACACAGCATCGTACAAATGCAATCTCTGACTTCCTCAACCTTTGGTCTGCACATGCGCCTGTCCAGCTGCAGGGCTCAATCCTCGATTGGATTCAGAAAGAGAAGGAAGCACAATTAGCACCTCCTCTACTGCGCCTGAAATTTTAGATCATGTAACAGGGACTGGTCAAGAAAACACGGATAATTAAATGAATGGAAATGTAATATTCTAGCAGAGAAAAGTAACTCATACGGAGTTGATTTCTAAGTCATTAGGAGTGTATTGATATGAAATGTGTGCTACATATGCTGCTGCTGTTGGTCTAACTCAAAACTTATGTTTGTAAATGATGATAACATGATGTTCATTCTCTGGTAATATAATGTACAGTTTCATCATTGGAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_8443#1 AATCACTGATCTGTCCCTTTATTACATTGGGCATAGTGATATGTGATCGAGTCCTAATGG CAGAGATTGTTAGTTCTGTGGTTGTTCATGAGGCAGTCAACCAAATCATACATGGCTTGG TGAACTGGAATGAGCGAAAATCAAGCGCAGAGGAGAACATGGAGAGGCTTGAGATGGCAC ACATCAGGTTGGAGGCTGCACTTGAGACATCCTGTAAGTGGCGAATCACTGATTCTTCAT TACTGTGTTGGCAGAAGAAGCTGAAGCGTGCTGCTCAAGAGTGCGATGACACACTGCGCA AATGCCGGCAACGCATCCTGGAACAAGAAGAGGCAGAACAAGAAGTAAGGAATTCCTCTA TTCCTAGACGAATAGCCCATGCCACCAAGTCATTAGTGTCCTCCTTATTTTACAGCAATA TCGATGGCTCATGTAGATCTGCTGTTCGAAGATTTGAGTGGTTTGCAGATGGAGCTAATG AGTTTTTGAGATTTGTGGAGTTTGGAGGAACACCACATCAGTACTTGTTCTTTGATCCTC TTATCAGGCAACTTCTTGCAGGCAAAACACTAGAGTATAAATTAGTGTCTGAAAATAAGT ACCGGTTGTTTGTCATACGGCCCTTCTGTATTTCAGAGAATAGAATAGAGGCTAGGCTGA TCTTTGACAGTAAAAATGCTAGTGCACTGGAGGATGATTTTTTCCTGTGTATGCTGCTAC AAGTTTCAGAGAGTGTGGACATACTTGGCATTGTAATCAAGTGCTTGCAGCTGTTTAATC CCCATTTCATGTCTACAGCTGAATCTGTTAGGAATGAACTTACTCAGCTACCTTCACAAG ATTTCACCTGGGTGCCATATGCTGAATCATGCCACAAAAAACACTGGGATAATATTCACA GCATTACTACCCAATGGTTTCGCCCTAACCCATTATGCTGCAAGCAGCATGGTCAGAACC ACAGCTGTGAAAGTAGCAATCTAGGAATGCCATCTGTACAGGGTGTTTCTCTAGGACCAG TTATTGAAGTGAGTTTGCAGTGCCATGTCCCAGTTCCTGAGTTCAGAGAACAGGGAACAA TTGTCAAAGGCAAGCCTTCTCTTAAAAAATGCCCGCATATGAAAGTTGACCTTGTCTACA CACCCCATGGCTCATCACAAGACCTACTCCCAGAAATCAAGAGTTCTGTAATAGAGGTAA TTAATGGTGATAAGCAACATTGCTTGCACACAAACATTGCCTTGGAACTAATGGAAGAGA TCATGCTGCCAAGGGCAGTAGATTGTTTTCATGAGAATGCAGAAGCGAAATTGTATCAGA TGCTTTGGAAGTCTAAACATGGTGGTGCATATCTTCAGGTTATGAAGGCAACCATGAACA CTCGGAGCACACAGAGAACCATTCGAGGATCTAGGAAAGCGAAGCTGTTGCAACAGCAGG GTCATAAAACACAGCATCGTACAAATGCAATCTCTGACTTCCTCAACCTTTGGTCTGCAC ATGCGCCTGTCCAGCTGCAGGGCTCAATCCTCGATTGGATTCAGAAAGAGAAGGAAGCAC AATTAGCACCTCCTCTACTGCGCCTGAAATTTTAGATCATGTAACAGGGACTGGTCAAGA AAACACGGATAATTAAATGAATGGAAATGTAATATTCTAGCAGAGAAAAGTAACTCATAC GGAGTTGATTTCTAAGTCATTAGGAGTGTATTGATATGAAATGTGTGCTACATATGCTGC TGCTGTTGGTCTAACTCAAAACTTATGTTTGTAAATGATGATAACATGATGTTCATTCTC TGGTAATATAATGTACAGTTTCATCATTGGAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8443#0      AGAGCGCTGGCGGCGAGCGGCGGCGCCGCCGCCGCAGCCGCCGCGCGCATGGCGGCACGG 60
consensus_8443#1      ------------------------------------------------------------
                                                                                  

consensus_8443#0      GGAGGTAGGAGGCGGAGCATGGAGGGGGAAGCTAGCTGCGCCCCGGCGCGACGGAGATGA 120
consensus_8443#1      ------------------------------------------------------------
                                                                                  

consensus_8443#0      GGAGGCGCAAGCACAAGCGCACCCACCGACTACCGCCGCGGCGAGCGCTCGAGAAAACAG 180
consensus_8443#1      ------------------------------------------------------------
                                                                                  

consensus_8443#0      AACAATGCAGCAAGGAGGAGACCAAGTCATTTTTTTGTGTCTGTTGGTGGGTCTGTGTGG 240
consensus_8443#1      ------------------------------------------------------------
                                                                                  

consensus_8443#0      AGGTGGGCATGCCAAGCCAACATAAGGTGCCAAATAGAACAATTTCAATGCATATGGAAG 300
consensus_8443#1      ------------------------------------------------------------
                                                                                  

consensus_8443#0      ACAGTTCATTTTATAATTGATGCTGATGGACCCTTTCGCAAAGGAAGAAGACTTGCAATC 360
consensus_8443#1      ------------------------------------------------------------
                                                                                  

consensus_8443#0      CTGTGAAACAGAGTGTGGCAGGCAATTTCACCGGTCTGAACATATATTACTCAAAAGTTG 420
consensus_8443#1      ------------------------------------------------------------
                                                                                  

consensus_8443#0      GTTCAGTTACAGAATATCTGGAGAAATACCAGAGCTGGACGCACATTTATGGTCTTCAGG 480
consensus_8443#1      ------------------------------------------------------------
                                                                                  

consensus_8443#0      CTTGCAGTGCAATCTGTTTACATCATTATTTTCAACTAGTTTGGTGAGTTATTGTCTGCT 540
consensus_8443#1      ------------------------------------------------------------
                                                                                  

consensus_8443#0      GGGTACTCTTCGGTGAACCTGTGTGACCACAAATTGCTTCCTATTGATTCAACTCAGAAG 600
consensus_8443#1      ------------AATCACTGATCTGTCCCTTTATTACATTGGGCATAGT-GATATGTGAT 47
                                      **   * ** **    *** * *       * *  *      * 

consensus_8443#0      GGAGGGAACATGGGAGAGGTAGTCAGTTCTGCCGTTGTTCATGAGACAGTGAACAAAATC 660
consensus_8443#1      CGAGTCCTAATGGCAGAGATTGTTAGTTCTGTGGTTGTTCATGAGGCAGTCAACCAAATC 107
                       ***     **** **** * ** *******  ************ **** *** *****

consensus_8443#0      ATATCTGGCTTGATTGACAAGTATGAGCAAAATTCAAGTGCGGAGGAGCAGATGGAGAGG 720
consensus_8443#1      ATACATGGCTTGGTGAACTGGAATGAGCGAAAATCAAGCGCAGAGGAGAACATGGAGAGG 167
                      ***  ******* *  **  * ****** *** ***** ** ****** * *********

consensus_8443#0      TTGGAGATGGCGCACATCAAGTTGGAGACTGCACTTGAGACATCCAGTAAGTGGCAGATC 780
consensus_8443#1      CTTGAGATGGCACACATCAGGTTGGAGGCTGCACTTGAGACATCCTGTAAGTGGCGAATC 227
                       * ******** ******* ******* ***************** *********  ***

consensus_8443#0      ACTGGTGGGCCCTTGCAACGTTGGCAGAAGAAGCTGAAGCGTGCTGCTGAAGAGTGTGAT 840
consensus_8443#1      ACTGATTCTTCATTACTGTGTTGGCAGAAGAAGCTGAAGCGTGCTGCTCAAGAGTGCGAT 287
                      **** *    * ** *   ***************************** ******* ***

consensus_8443#0      GATACACTGCGCAAATGTAGGCAGCGCGTCCAAGAAGAAGAACAGGCTGAACAACAAGTA 900
consensus_8443#1      GACACACTGCGCAAATGCCGGCAACGCATCCTGGAACAAGAAGAGGCAGAACAAGAAGTA 347
                      ** **************  **** *** ***  *** ***** **** ****** *****

consensus_8443#0      AGGAATTCCTCCTTACCTACGCGAGTTGCCCATGCCACCAAGTCACTGATATCATCCATC 960
consensus_8443#1      AGGAATTCCTCTATTCCTAGACGAATAGCCCATGCCACCAAGTCATTAGTGTCCTCCTTA 407
                      ***********  * ****  *** * ****************** *  * ** *** * 

consensus_8443#0      TTTCACGGCAATATCGACGAGCCGATTAGATCTGCTGTTCGAAGATTTGAATGGTTTGCT 1020
consensus_8443#1      TTTTACAGCAATATCGATGGCTCATGTAGATCTGCTGTTCGAAGATTTGAGTGGTTTGCA 467
                      *** ** ********** *   *   ************************ ******** 

consensus_8443#0      GATGGAGCTAATGACTTTCTGAGATCCGTGGAGTTTGGAGGGACACCACGTCGTTACTTG 1080
consensus_8443#1      GATGGAGCTAATGAGTTTTTGAGATTTGTGGAGTTTGGAGGAACACCACATCAGTACTTG 527
                      ************** *** ******  ************** ******* **  ******

consensus_8443#0      TTCTTTGACCCTCTTATCGGGCGCCTTCTTGCAGGCGAAACACTTGAGTACAAATTAGTG 1140
consensus_8443#1      TTCTTTGATCCTCTTATCAGGCAACTTCTTGCAGGCAAAACACTAGAGTATAAATTAGTG 587
                      ******** ********* ***  ************ ******* ***** *********

consensus_8443#0      CAAGGAAACAATCAGCATTTGTTTTGGATACGGCCAAATAACACCGCAGAGCGAGGAGTA 1200
consensus_8443#1      TCTGAAAATAAGTACCGGTTGTTTGTCATACGGCCCTTCTGTATTTCAGAGAATAGAATA 647
                         * *** **  * *  ******   ********       *   *****    ** **

consensus_8443#0      GAAGCTAAGTTGATCTTTGTTTACAATGATGAAAGTGTGCCTGTGAATAACTTTTTTCTA 1260
consensus_8443#1      GAGGCTAGGCTGATCTTTGACAGTAAAAATGCTAGTGCACTGGAGGATGATTTTTTCCTG 707
                      ** **** * *********     **  ***  ****  *  * * ** * ***** ** 

consensus_8443#0      GGTATGATGCTACAACTTTCAGAGTGCACAAACATAGTTGGTACTGCAATTAAGTGCTTG 1320
consensus_8443#1      TGTATGCTGCTACAAGTTTCAGAGAGTGTGGACATACTTGGCATTGTAATCAAGTGCTTG 767
                       ***** ******** ******** *     ***** **** * ** *** *********

consensus_8443#0      CAGTTGTTTGCCCCTCATTTCAAGTCTACAACTGAAACTGTTAGGAAGGAACTTAGTCAA 1380
consensus_8443#1      CAGCTGTTTAATCCCCATTTCATGTCTACAGCTGAATCTGTTAGGAATGAACTTACTCAG 827
                      *** *****   ** ******* ******* ***** ********** ******* *** 

consensus_8443#0      CTACCTACACAGGACTTCTCATGGGTGCCACGTTCTCATTCATACCAT---------TGG 1431
consensus_8443#1      CTACCTTCACAAGATTTCACCTGGGTGCCATATGCTGAATCATGCCACAAAAAACACTGG 887
                      ****** **** ** *** * *********  * ** * **** ***          ***

consensus_8443#0      GACAGTATTCACAGTACAGTTACTGAATGGTTCCGCCCAAACCCAATGTGTTGCAAGCAT 1491
consensus_8443#1      GATAATATTCACAGCATTACTACCCAATGGTTTCGCCCTAACCCATTATGCTGCAAGCAG 947
                      ** * ********* *    ***  ******* ***** ****** * ** ******** 

consensus_8443#0      CGTAGTCAGAAG---GTATGTAGTAGTGGCAACATGGAGAAGACATATTTACCAGACATT 1548
consensus_8443#1      CATGGTCAGAACCACAGCTGTGAAAGTAGCAATCTAGGAATGCCATCTGTACAGGGTGTT 1007
                      * * *******       ***   *** ****  * *  * * *** * ***  *   **

consensus_8443#0      TCTCTAGAATCAGTTATTGACGTGAGTTTGCAGTGCCAAGTTTCACTGCCTGGGTTAAAA 1608
consensus_8443#1      TCTCTAGGACCAGTTATTGAAGTGAGTTTGCAGTGCCATGTCCCAGTTCCTGAGTTCAGA 1067
                      ******* * ********** ***************** **  ** * **** *** * *

consensus_8443#0      GATCAGGTCACAGTTGTTGAGAGCAAACCTTCTCTCAAAGAATTTCCGCATCTGAAAGTT 1668
consensus_8443#1      GAACAGGGAACAATTGTCAAAGGCAAGCCTTCTCTTAAAAAATGCCCGCATATGAAAGTT 1127
                      ** ****  *** ****  *  **** ******** *** ***  ****** ********

consensus_8443#0      CACCTTGTCTATACGCCCCATGGCTCTTCAGAAGACCTATTCCCAGCAGTCGAGAGTTCT 1728
consensus_8443#1      GACCTTGTCTACACACCCCATGGCTCATCACAAGACCTACTCCCAGAAATCAAGAGTTCT 1187
                       ********** ** *********** *** ******** ****** * ** ********

consensus_8443#0      GTGATAGAGATGGTTAATGGTGTTGACCAACATTGCTTGCACACAAACATTGCCTTGGAA 1788
consensus_8443#1      GTAATAGAGGTAATTAATGGTGATAAGCAACATTGCTTGCACACAAACATTGCCTTGGAA 1247
                      ** ****** *  ********* * * *********************************

consensus_8443#0      CAAATGGAAGGGATCATGCTGCCAAGGGCTGTAGATTGTTTTCGTCAGAATGCAGGAACA 1848
consensus_8443#1      CTAATGGAAGAGATCATGCTGCCAAGGGCAGTAGATTGTTTTCATGAGAATGCAGAAGCG 1307
                      * ******** ****************** ************* * ********* * * 

consensus_8443#0      ACAGTGTATCAGATGGTTTGGAAGTCCAAACATGGTGGTGCATATCTTCAGGCTGTGAAG 1908
consensus_8443#1      AAATTGTATCAGATGCTTTGGAAGTCTAAACATGGTGGTGCATATCTTCAGGTTATGAAG 1367
                      * * *********** ********** ************************* * *****

consensus_8443#0      GTATCCAAGAACATGCTGAG---GCAGAGAACCATTCGAGGAGCCAAGAAAGCGAAGCTA 1965
consensus_8443#1      GCAACCATGAACACTCGGAGCACACAGAGAACCATTCGAGGATCTAGGAAAGCGAAGCTG 1427
                      * * *** *****  * ***    ****************** * * ************ 

consensus_8443#0      TTGCGACGACATGATCATTGGACACAGAGTCGCATAGATGTGATCTCTGATTTCTTAAAT 2025
consensus_8443#1      TTGCAACAGCAGGGTCATAAAACACAGCATCGTACAAATGCAATCTCTGACTTCCTCAAC 1487
                      **** **  ** * ****   ******  *** * * ***  ******** *** * ** 

consensus_8443#0      CTTTGGGCTGCGCATGCGCCTGTCCAGCTGCAGGGCTCAATCCTCGATTGGACTCAGAAA 2085
consensus_8443#1      CTTTGGTCTGCACATGCGCCTGTCCAGCTGCAGGGCTCAATCCTCGATTGGATTCAGAAA 1547
                      ****** **** **************************************** *******

consensus_8443#0      GAAAAGGAAGCACAGTTAGCACCTCATCTACTACATCTGAAATTTTAGATCATGTAATAG 2145
consensus_8443#1      GAGAAGGAAGCACAATTAGCACCTCCTCTACTGCGCCTGAAATTTTAGATCATGTAACAG 1607
                      ** *********** ********** ****** *  ********************* **

consensus_8443#0      GGACTTGTCAGGGAAATAGGGATACTTCAAAGAATGAAAATGTACTACCCCGTCACAAAA 2205
consensus_8443#1      GGACTGGTCAAGAAAACACGGATAATTAAATGAATGGAAATGTAATATTCTAGCAGAGAA 1667
                      ***** **** * *** * ***** ** ** ***** ******* **  *   ** * **

consensus_8443#0      TATAAGCACTTTTAGCTAAGAATATGGATAAA--AATGCTTATATTTTGGGACAAAGGGA 2263
consensus_8443#1      ---AAGTAACTCATACGGAGTTGATTTCTAAGTCATTAGGAGTGTATTGATATGAAATGT 1724
                         *** *  *    *  **   **   ***   * *     * * ***  *  **  * 

consensus_8443#0      GTAATATTCTAGCAGGGGAAGTGACTTAGGGAGTTATCTCCAAGTTATTAGGAGTGTATT 2323
consensus_8443#1      GTGCTACATATGCTGCTGCTGTTGGTCTAACTCAAAACTTATGTTTGTAAATGATG--AT 1782
                      **  **     ** *  *  **   *         * **     ** * *    **   *

consensus_8443#0      GATCTGAAATGTGTGCTCCATATATTTGCTGCTGCTGTTTGCGCAGCGCAGAACTTAGTA 2383
consensus_8443#1      AACATGATGTTCATTCTCTGGTAATATAATG-TACAGTTTCATCATTGGAAAAAAAAAAA 1841
                       *  ***  *   * ***     ** *  ** * * ****   **  * * **   *  *

consensus_8443#0      AATGGTGATAA- 2394
consensus_8443#1      AAAAAAAAAAAA 1853
                      **     * ** 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)