cluster # 8444

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Oryza sativa
cluster # 8444 cluster # 8444 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8444#0 length = 2408 sequences # 5
consensusID : consensus_8444#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2408
fasta sequence
                              [TTTGCTCGTATTTTCTCCCCAAAGTCATCAACTTTGATGCTCACCATTCATTCAATCTAGTTATTATCTGCTGGGTACTCTCTGGTCGCACCTGCGTGGCTTCGATTTACTTGCGACTAATTCAACTCAGATTCTCTGAAGATCAGGGAGGCTAATCTCGCAGCTGAAGATGGGAGAGATAGTCAGTTATGCGGTCGTTCATGAGACAGTGAACAAAATCATATCTGGGTTGGTTGACAAGTATGAGCGAAAATCAAGTGCGGAGGAGCAGATGGAGAGGCTGGAGATGGCGCAAATCAAGTTGGAGATTGCTCTTGAGACATCCAATAAGTGGCAGATCACTAGTGGGCCGTTATTACGGTGGCAGAAGAAGCTAAAGCGTGCTGCTGAAGAGTGTGATGACACATTACGCAAGTGTAGGCAGCGTGTCGAGGAAGAAGAGGAGGTGGAACAGCAAGTAAGGAATTCATCCTTTCCTAAGCGAATTGCCCATGCCACCAAGTCAATGATATCATCCATCTTTCACGGCAATATCGACGAGCCAACTGTGTCTTCTGTTCGAAGATTCGAGTGGTTTGCAGAAGGAGCTAATGACTTTCTGAGGTCTGTGGAGTTTGGAGGGACACCACATCGTTACTCATTCTTCGACCCCCTTATTGGGCACCTTCTTGCAGGTGAAACTCTAGAGTACAAATCGGTGCAGGGAAACAAGCAGCATTTGTTTTGGATACGGCCCAACAACATTTCAGAGCGAAGAGTAGAAGCTAAGTTGATATTTATTTACAATGATTGCAGTGCACCTGAGGATAACTTTTTTCTTGGTATGATGCTGCAGCTTTCAGAGAGTACAAACATAGTTGGCACTACAATTAGGTGCTTGCAGTTGTTTAGCCCTTATTTCAGTTCTTCTACAACTGAAGCTGTTAGGAAAGAACTTACTCAGCTACCTACACAAGACTTCTCCTGGGTGCCACGTTCTCGTTCAGTTCATTGGGACAGCATTCACAGAGTAGCTACTGAGTGGTTCCGCCCAAACCCACTGTGTTGCAAGCATGGTCATAAGGTATGTAGTAGTGGCTACATGGACAAGATAGAATTTTGTGATGTTTCTCTAGAACCAGTCATTGAAGTGTATTTGGAGAGCCAAATCTTCCAATATAGTTGCAACAAACAGAGGGCAGATGAACAAGGAAAAATATGTTCTCCCAGAAGACCATCATATCTGAAACTTGGAGTATTCCTTTTGCCTCATGTTTCTTCAACCGACCTTCTGCCTGCCACTGAGAGTTTTGCAGTAGAGGTGATCAATGGTGAGGAGCAGCTTTACTGTCACAAAAATGTTACACTGGAAAAGCTTAACAGGATAATGCTACCAAAAGCAATAGATAGCTTCAATCAGAATGCAGAAGTGACAGCGCATCAGTTGCTGTGGAAGTCAAAGCATGAAGCTGCATTCTTTCATGTGTGGAACACAAGAATGAATATGTCAAGCATATTGAGTACTGCTAGGAAATCAACGTTGTTGCAACAACATGATCACCTTGAACTGGAGAGCCGAGCAGATGTGATCTCTGAGTTTCTCAAGCTGTGGGTTGATCGTGCTCCTGTCATGATGCAGTTCGCAGCTGTGGACTGGATTCAGGCCCTACTTGGGGAAGCTGGAGATTCTAAAAAGTTGCTGATGAGCATGTAGCTGTTGGGAATCTGGAGGGAGTTGGTGAAACCTAGCTTCTGGTTACTAGGTTCATAAAATCTAGATTTGGTGGCTACTTAATTTCTTAACCTGGAGGAAGAATATAAGCTGTTTAGGCGAGCTGGAGATTTGCTAGTGTTGCTATAAGCTCATTCAAACAAGGCCTTGAAGGGAAATACAGTTGCCACCAAGATTATGGAATAGAGATTGATCATGGTAA-CAAGGGGAAATGAAAGTAATGGATAGGAAATATTCTACTCCCTCCGGCCTGCTTTGCTGCTTGTTCGCATAACCTTTGGAAGGCCCGCAACCACAGTACCTTCAATTCTTCTCAGCAAAGCACCTCCGCAACGTTGAATCTGATCAAGGAAAATCTGCAATTATGGGAGCACCGCCTCAAGCCTTGCCTTCGAGCACACATTACTGCTTGGGTGGTCAAATTTGATTAACCACCCTCTTTTCTCCACTTTTGTATTTTTGTATTATTTTTGTATTTTTTGTATTTTCTCTTCCTGCTTTACATCTTGTATTTTCTCCTGTTTTCCTTTTTTCTTCTTTCTCCTTTTTATCCTTCTTCTCCCCCTGTAATGCTCCTGTTGTTCTCTTATTTGGCTTTACCAGATCTCATCTGGTTTGACCACCATTAATACAATGGTTACAAGGTAGAGTCTCTCTACCTTTTGTGTAAAAAAAAAGTGGATGTGTAATCAATATT]

[+] EMBL AK120172             [TTTGCTCGTATTTTCTCCCCAAAGTCATCAACTTTGATGCTCACCATTCATTCAATCTAGTTATTATCTGCTGGGTACTCTCTGGTCGCACCTGCGTGGCTTCGATTTACTTGCGACTAATTCAACTCAGATTCTCTGAAGATCAGGGAGGCTAATCTCGCAGCTGAAGATGGGAGAGATAGTCAGTTATGCGGTCGTTCATGAGACAGTGAACAAAATCATATCTGGGTTGGTTGACAAGTATGAGCGAAAATCAAGTGCGGAGGAGCAGATGGAGAGGCTGGAGATGGCGCAAATCAAGTTGGAGATTGCTCTTGAGACATCCAATAAGTGGCAGATCACTAGTGGGCCGTTATTACGGTGGCAGAAGAAGCTAAAGCGTGCTGCTGAAGAGTGTGATGACACATTACGCAAGTGTAGGCTGCGTGTCGAGGAAGAAGAGGAGGTGGAACAGCAAGTAAGGAATTCATCCTTTCCTAAGCGAATTGCCCATGCCACCAAGTCAATGATATCATCCATCTTTCACGGCAATATCGACGAGCCAACTGTGTCTTCTGTTCGAAGATTCGAGTGGTTTGCAGAAGGAGCTAATGACTTTCTGAGGTCTGTGGAGTTTGGAGGGACACCACATCGTTACTCATTCTTCGACCCCCTTATTGGGCACCTTCTTGCAGGTGAAACTCTAGAGTACAAATCGGTGCAGGGAAACAAGCAGCATTTGTTTTGGATACGGCCCAACAACATTTCAGAGCGAAGAGTAGAAGCTAAGTTGATATTTATTTACAATGATTGCAGTGCACCTGAGGATAACTTTTTTCTTGGTATGATGCTGCAGCTTTCAGAGAGTACAAACATAGTTGGCACTACAATTAGGTGCTTGCAGTTGTTTAGCCCTTATTTCAGTTCTTCTACAACTGAAGCTGTTAGGAAAGAACTTACTCAGCTACCTACACAAGACTTCTCCTGGGTGCCACGTTCTCGTTCAGTTCATTGGGACAGCATTCACAGAGTAGCTACTGAGTGGTTCCGCCCAAACCCACTGTGTTGCAAGCATGGTCATAAGGTATGTAGTAGTGGCTACATGGACAAGATAGAATTTTGTGATGTTTCTCTAGAACCAGTCATTGAAGTGTATTTGGAGAGCCAAATCTTCCAATATAGTTGCAACAAACAGAGGGCAGATGAACAAGGAAAAATATGTTCTCCCAGAAGACCATCATATCTGAAACTTGGAGTATTCCTTTTGCCTCATGTTTCTTCAACCGACCTTCTGCCTGCCACTGAGAGTTTTGCAGTAGAGGTGATCAATGGTGAGGAGCAGCTTTACTGTCACAAAAATGTTACACTGGAAAAGCTTAACAGGATAATGCTACCAAAAGCAATAGATAGCTTCAATCAGAATGCAGAAGTGACAGCGCATCAGTTGCTGTGGAAGTCAAAGCATGAAGCTGCATTCTTTCATGTGTGGAACACAAGAATGAATATGTCAAGCATATTGAGTACTGCTAGGAAATCAACGTTGTTGCAACAACATGATCACCTTGAACTGGAGAGCCGAGCAGATGTGATCTCTGAGTTTCTCAAGCTGTGGGTTGATCGTGCTCCTGTCATGATGCAGTTCGCAGCTGTGGACTGGATTCAGGCCCTACTTGGGGAAGCTGGAGATTCTAAAAAGTTGCTGATGAGCATGTAGCTGTTGGGAATCTGGAGGGAGTTGGTGAAACCTAGCTTCTGGTTACTAGGTTCATAAAATCTAGATTTGGTGGCTACTTAATTTCTTAACCTGGAGGAAGAATATAAGCTGTTTAGGCGAGCTGGAGATTTGCTAGTGTTGCTATAAGCTCATTCAAACAAGGCCTTGAAGGGAAATACAGTTGCCACCAAGATTATGGAATAGAGATTGATCATGGTAA CAAGGGGAAATGAAAGTAATGGATAGGAAATATTCTACTCCCTCCGGCCTGCTTTGCTGCTTGTTCGCATAACCTTTGGAAGGCCCGCAACCACAGTACCTTCAATTCTTCTCAGCAAAGCACCTCCGCAACGTTGAATCTGATCAAGGAAAATCTGCAATTATGGGAGCACCGCCTCAAGCCTTGCCTTCGAGCACACATTACTGCTTGGGTGGTCAAATTTGATTAACCACCCTCTTTTCTCCACTTTTGTATTTTTGTATTATTTTTGTATTTTTTGTATTTTCTCTTCCTGCTTTACATCTTGTATTTTCTCCTGTTTTCCTTTTTTCTTCTTTCTCCTTTTTATCCTTCTTCTCCCCCTGTAATGCTCCTGTTGTTCTCTTATTTGGCTTTACCAGATCTCATCTGGTTTGACCACCATTAATACAATGGTTACAAGGTAGAGTCTCTCTACCTTTTGTGTAAAAAAAAAGTGGATGTGTAATCAATATT]
[+] EMBL AU063484             [                       GTCATCAACTTTGATGCTCACCATTCATTCAATCTAGTTATTATCTGCTGGGTACTCTCTGGTCGCACCTGCGTGGCTTCGATTTACTTGCGACTAATTCAACTCAGATTCTCTGAAGATCAGGGAGGCTAATCTCGCAGCTGAAGATGGGAGAGATAGTCAGTTATGCGGTCGTTCATGAGACAGTGAACAAAATCATATCTGGGTTGGTTGACAAGTATGAGCGAAAATCAAGTGCGGAGGAGCAGATGGAGAGGCTGGAGATGGCGCAAATCAAGTTGGAGATTGCTCTTGAGACATCCAATAAGTGGCAGATCACTAGTGGGCCGTTATTACGGTGGCAGAAGAAGCTAAAGCGTGCTGCTGAAGAGTGTGATGACACATTACGCAAGTGTAGGCAGCGTGTCGAGGAAGAAGAGGAGGTGGAACAGCAAGTAAGGAATTCATCCTTTCCTAAGCGAATTGCCCATGCCACCAAGTCAATGATATCATCCATCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU063486             [                       GTCATCAACTTTGATGCTCACCATTCATTCAATCTAGTTATTATCTGCTGGGTACTCTCTGGTCGCACCTGCGTGGCTTCGATTTACTTGCGACTAATTCAACTCAGATTCTCTGAAGATCAGGGAGGCTAATCTCGCAGCTGAAGATGGGAGAGATAGTCAGTTATGCGGTCGTTCATGAGACAGTGAACAAAATCATATCTGGGTTGGTTGACAAGTATGAGCGAAAATCAAGTGCGGAGGAGCAGATGGAGAGGCTGGAGATGGCGCAAATCAAGTTGGAGATTGCTCTTGAGACATCCAATAAGTGGCAGATCACTAGTGGGCCGTTATTACGGTGGCAGAAGAAGCTAAAGCGTGCTGCTGAAGAGTGTGATGACACATTACGCAAGTGTAGGCAGCGTGTCGAGGAAGAAGAGGAGGTGGAACAGCAAGTAAGGAATTCATCCTTTCCTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA999732             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCAAGCTGTGGGTTGATCGTGCTCCTGTCATGATGCAGTTCGCAGCTGTGGACTGGATTCAGGCCCTACTTGGGGAAGCTGGAGATTCTAAAAAGTTGCTGATGAGCATGTAGCTGTTGGGAATCTGGAGGAAGTTGGTGAAACCTAGCTTCTGGTTACTAGGTTCATAAAATCTAGATTTGGTGGCTACTTAATTTCTTAACCTGGAGGAAGAATATAAGCTGTTTAGGCGAGCTGGAGATTTGCTAGTGTTGCTATAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM419193             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGAATAGAGATTGATCATGGTAACCAAGGGGAAATGAAAGTAATGGATAGGAAATATTCTACTCCCTCCGGCCTGCTTTGCTGCTTGTTCGCATAACCTTTGGAAGGCCCGCAACCNCAGTACCTTCAATTCTTCTCAGCAAAGCACCTCCGCAACGTTGAATCTGATCAAGGAAAATCTGCAATTATGGGAGCACCGCCTCAAGCCTTGCCTTCGAGCACACATTACTGCTTGGGTGGTCAAATTTGATTAACCACCCTCTTTTCTCCACTTTTGTATTTTTGTATTATTTTTGTATTTTTTGTATTTTCTCTTCCTGCTTTACATCTTGTATTTTCTCCTGTTTTCCTTTTTTCTTCTTTCTCCTTTTTATCCTTCTTCTCCCCCTGTAATGCTCCTGTTGTTCTCTTATTTGGCTTTACCAGATCTCATCTGGTTTGACCACCATTAATACAATGGTTACAAGGTAGAGTCTCTCTACCTTTTGTGTAAAA                         ]




>consensus_8444#0
TTTGCTCGTATTTTCTCCCCAAAGTCATCAACTTTGATGCTCACCATTCATTCAATCTAG
TTATTATCTGCTGGGTACTCTCTGGTCGCACCTGCGTGGCTTCGATTTACTTGCGACTAA
TTCAACTCAGATTCTCTGAAGATCAGGGAGGCTAATCTCGCAGCTGAAGATGGGAGAGAT
AGTCAGTTATGCGGTCGTTCATGAGACAGTGAACAAAATCATATCTGGGTTGGTTGACAA
GTATGAGCGAAAATCAAGTGCGGAGGAGCAGATGGAGAGGCTGGAGATGGCGCAAATCAA
GTTGGAGATTGCTCTTGAGACATCCAATAAGTGGCAGATCACTAGTGGGCCGTTATTACG
GTGGCAGAAGAAGCTAAAGCGTGCTGCTGAAGAGTGTGATGACACATTACGCAAGTGTAG
GCAGCGTGTCGAGGAAGAAGAGGAGGTGGAACAGCAAGTAAGGAATTCATCCTTTCCTAA
GCGAATTGCCCATGCCACCAAGTCAATGATATCATCCATCTTTCACGGCAATATCGACGA
GCCAACTGTGTCTTCTGTTCGAAGATTCGAGTGGTTTGCAGAAGGAGCTAATGACTTTCT
GAGGTCTGTGGAGTTTGGAGGGACACCACATCGTTACTCATTCTTCGACCCCCTTATTGG
GCACCTTCTTGCAGGTGAAACTCTAGAGTACAAATCGGTGCAGGGAAACAAGCAGCATTT
GTTTTGGATACGGCCCAACAACATTTCAGAGCGAAGAGTAGAAGCTAAGTTGATATTTAT
TTACAATGATTGCAGTGCACCTGAGGATAACTTTTTTCTTGGTATGATGCTGCAGCTTTC
AGAGAGTACAAACATAGTTGGCACTACAATTAGGTGCTTGCAGTTGTTTAGCCCTTATTT
CAGTTCTTCTACAACTGAAGCTGTTAGGAAAGAACTTACTCAGCTACCTACACAAGACTT
CTCCTGGGTGCCACGTTCTCGTTCAGTTCATTGGGACAGCATTCACAGAGTAGCTACTGA
GTGGTTCCGCCCAAACCCACTGTGTTGCAAGCATGGTCATAAGGTATGTAGTAGTGGCTA
CATGGACAAGATAGAATTTTGTGATGTTTCTCTAGAACCAGTCATTGAAGTGTATTTGGA
GAGCCAAATCTTCCAATATAGTTGCAACAAACAGAGGGCAGATGAACAAGGAAAAATATG
TTCTCCCAGAAGACCATCATATCTGAAACTTGGAGTATTCCTTTTGCCTCATGTTTCTTC
AACCGACCTTCTGCCTGCCACTGAGAGTTTTGCAGTAGAGGTGATCAATGGTGAGGAGCA
GCTTTACTGTCACAAAAATGTTACACTGGAAAAGCTTAACAGGATAATGCTACCAAAAGC
AATAGATAGCTTCAATCAGAATGCAGAAGTGACAGCGCATCAGTTGCTGTGGAAGTCAAA
GCATGAAGCTGCATTCTTTCATGTGTGGAACACAAGAATGAATATGTCAAGCATATTGAG
TACTGCTAGGAAATCAACGTTGTTGCAACAACATGATCACCTTGAACTGGAGAGCCGAGC
AGATGTGATCTCTGAGTTTCTCAAGCTGTGGGTTGATCGTGCTCCTGTCATGATGCAGTT
CGCAGCTGTGGACTGGATTCAGGCCCTACTTGGGGAAGCTGGAGATTCTAAAAAGTTGCT
GATGAGCATGTAGCTGTTGGGAATCTGGAGGGAGTTGGTGAAACCTAGCTTCTGGTTACT
AGGTTCATAAAATCTAGATTTGGTGGCTACTTAATTTCTTAACCTGGAGGAAGAATATAA
GCTGTTTAGGCGAGCTGGAGATTTGCTAGTGTTGCTATAAGCTCATTCAAACAAGGCCTT
GAAGGGAAATACAGTTGCCACCAAGATTATGGAATAGAGATTGATCATGGTAACAAGGGG
AAATGAAAGTAATGGATAGGAAATATTCTACTCCCTCCGGCCTGCTTTGCTGCTTGTTCG
CATAACCTTTGGAAGGCCCGCAACCACAGTACCTTCAATTCTTCTCAGCAAAGCACCTCC
GCAACGTTGAATCTGATCAAGGAAAATCTGCAATTATGGGAGCACCGCCTCAAGCCTTGC
CTTCGAGCACACATTACTGCTTGGGTGGTCAAATTTGATTAACCACCCTCTTTTCTCCAC
TTTTGTATTTTTGTATTATTTTTGTATTTTTTGTATTTTCTCTTCCTGCTTTACATCTTG
TATTTTCTCCTGTTTTCCTTTTTTCTTCTTTCTCCTTTTTATCCTTCTTCTCCCCCTGTA
ATGCTCCTGTTGTTCTCTTATTTGGCTTTACCAGATCTCATCTGGTTTGACCACCATTAA
TACAATGGTTACAAGGTAGAGTCTCTCTACCTTTTGTGTAAAAAAAAAGTGGATGTGTAA
TCAATATT
clustalw multiple alignements is not computed in this case