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Oryza sativa
cluster # 847 cluster # 847       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_847#0 length = 1747 sequences # 2  

consensusID : consensus_847#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1747
fasta sequence
                              [CTCTCTCTCTCTCACGCTCCCCTCCTCGCCTCGCCTGAGCAGCCACCGGAGCAGCAGCAGCAGCAGCTCGCCGCCGACGAGTCGCCGACGACGATGGGGTACACGTACACGCCGACGTACTACTCGGGCCTGCACGACGCCATCGCGTCGCTGTGCAAGTCCATCCTCCCCTTCGGCGGCTTCAGGTCCGGCCGCCGCCTCACCGCCGACCAGGCCGCGGCGAGGCGCCACGCCGACGCGCTCAAGT-GGCAGCAGGAATCGTTCCGCCGCATCCTCCACCTCTCCGCGCTCCACCGCGAGGGCATCGTCCCGCCCTCCGACGTCGACGCCTTCCGCGCCGACATGCTCGCCACCCTCGCCGCCGCCCCGCCCCCGCCCGCCCACCCCGACCAGCCCGCCATCCTCCGCGACAAGCTCCTCTTCCTCCAGGAGCTCTTGTACGCCAAGTGCATCTCGGCGGCGGAGTACAACTCCACCAAGAGCCCACTCGTGCAGCGCCTCGCGGCGTTCGGTGTCGTGGTCGACTGCCCCGACGCGGACGTCGGCGATGGCGGCGCGGCTTCGGCGGCGGCACCAGCCTCGTCGTCTTCCATGGAGGAGTGGTCGGAGATCGACCTCCGGGACCCGCCGCCCGCCGCGGCGGCCTCCGACAAGCCGAAGCACAAGGCCTTCGTCCCGCCATGGAAGAGCAGAGGCAAGAAGGAGCTGGACGCATCGAGGCCACCGTTAGCCCCCGTCGACCAGAACAACAGCAAGAACGCCCCATCCGTCCTCATGGCCGAGAGCTCGCCGTCGGAAGCCATGCCCACCGCCAAGACCGACAAGGGGAAGAGGAGGCACCTGACGGCGATGTTCCACAACGGCGGCAATGGCAGCGAGAACAAGGAGCCCCCGGCGGCGTCCATGGAAGGCACAGATCAGGAGAAGGATGCGTCAAAGAGCAAGAAGAAGAGTTCGTGGGGGTTCGATGGCCTCAAGAAGTGGAAGAAGGCAAGCAACGATGAGGCGACGGCCGGCGGTGAGCGGCCGGAGCACGCTGCGCCGCGGTCTTCGTACAGTGAGTGCCGGCTTGAGGCGAGCCCGGCTGTTGCCAAGGATGCAAAGAGAGCCAAGAAGAAGCTGAATACGGCCACCGGCGACGATGATTCTGCTTCCGATTTAGCGAATGATAAGGTTTTGGTGGAGAACACAAAGAAAGAGCTTTCAAGGATTCAGGCTGAGTTGTCATCCACCAACCGAAACTTGAACTTTTCGGATCAACAAATTGAGGCCATCTCAACAAGGCTTCCAGTGGACAAATCTGACCTCAAGACCTTCTTCCCAAAGGCATGGTGCGATGAACACGGAGACAACGTGATCAACGTGGCGAAGAAAGAGTTCAAGGAGCACGTCGAAGAGATGGAGAAGCAGAGGGACATCACCGGCGGCGGTGATGGCTGGGTTGCATTCGGAGACAGCCATGACGAAAATTTCAACCCGAGAGCATTCTCTCAGCATCAGGCTGCAGTGAAGGGTAACGTCCATGACAGTCTTAGCAGCAGTCAACATTTCACAAACCCTTTCTATGACGAGAAGAATCCTTTCTTGACTCCAAGCTACGATTGATACTGCGAGTGAATGTAATTGGTCTTTTGTGTTGGAAATTTCTGTGATAGTTTTACCTCCAAGTTACTGATGTTGTACTTTAAGGTTCAATTGTTATATTGGACCTAGGTTGTGTATGAATTTTCTATGAATTATGAGCTTG]

[+] EMBL AK101051             [CTCTCTCTCTCTCACGCTCCCCTCCTCGCCTCGCCTGAGCAGCCACCGGAGCAGCAGCAGCAGCAGCTCGCCGCCGACGAGTCGCCGACGACGATGGGGTACACGTACACGCCGACGTACTACTCGGGCCTGCACGACGCCATCGCGTCGCTGTGCAAGTCCATCCTCCCCTTCGGCGGCTTCAGGTCCGGCCGCCGCCTCACCGCCGACCAGGCCGCGGCGAGGCGCCACGCCGACGCGCTCAAGT GGCAGCAGGAATCGTTCCGCCGCATCCTCCACCTCTCCGCGCTCCACCGCGAGGGCATCGTCCCGCCCTCCGACGTCGACGCCTTCCGCGCCGACATGCTCGCCACCCTCGCCGCCGCCCCGCCCCCGCCCGCCCACCCCGACCAGCCCGCCATCCTCCGCGACAAGCTCCTCTTCCTCCAGGAGCTCTTGTACGCCAAGTGCATCTCGGCGGCGGAGTACAACTCCACCAAGAGCCCACTCGTGCAGCGCCTCGCGGCGTTCGGTGTCGTGGTCGACTGCCCCGACGCGGACGTCGGCGATGGCGGCGCGGCTTCGGCGGCGGCACCAGCCTCGTCGTCTTCCATGGAGGAGTGGTCGGAGATCGACCTCCGGGACCCGCCGCCCGCCGCGGCGGCCTCCGACAAGCCGAAGCACAAGGCCTTCGTCCCGCCATGGAAGAGCAGAGGCAAGAAGGAGCTGGACGCATCGAGGCCACCGTTAGCCCCCGTCGACCAGAACAACAGCAAGAACGCCCCATCCGTCCTCATGGCCGAGAGCTCGCCGTCGGAAGCCATGCCCACCGCCAAGACCGACAAGGGGAAGAGGAGGCACCTGACGGCGATGTTCCACAACGGCGGCAATGGCAGCGAGAACAAGGAGCCCCCGGCGGCGTCCATGGAAGGCACAGATCAGGAGAAGGATGCGTCAAAGAGCAAGAAGAAGAGTTCGTGGGGGTTCGATGGCCTCAAGAAGTGGAAGAAGGCAAGCAACGATGAGGCGACGGCCGGCGGTGAGCGGCCGGAGCACGCTGCGCCGCGGTCTTCGTACAGTGAGTGCCGGCTTGAGGCGAGCCCGGCTGTTGCCAAGGATGCAAAGAGAGCCAAGAAGAAGCTGAATACGGCCACCGGCGACGATGATTCTGCTTCCGATTTAGCGAATGATAAGGTTTTGGTGGAGAACACAAAGAAAGAGCTTTCAAGGATTCAGGCTGAGTTGTCATCCACCAACCGAAACTTGAACTTTTCGGATCAACAAATTGAGGCCATCTCAACAAGGCTTCCAGTGGACAAATCTGACCTCAAGACCTTCTTCCCAAAGGCATGGTGCGATGAACACGGAGACAACGTGATCAACGTGGCGAAGAAAGAGTTCAAGGAGCACGTCGAAGAGATGGAGAAGCAGAGGGACATCACCGGCGGCGGTGATGGCTGGGTTGCATTCGGAGACAGCCATGACGAAAATTTCAACCCGAGAGCATTCTCTCAGCATCAGGCTGCAGTGAAGGGTAACGTCCATGACAGTCTTAGCAGCAGTCAACATTTCACAAACCCTTTCTATGACGAGAAGAATCCTTTCTTGACTCCAAGCTACGATTGATACTGCGAGTGAATGTAATTGGTCTTTTGTGTTGGAAATTTCTGTGATAGTTTTACCTCCAAGTTACTGATGTTGTACTTTAAGGTTCAATTGTTATATTGGACCTAGGTTGTGTATGAATTTTCTATGAATTATGAGCTTG]
[+] EMBL C74582               [                             CTCGCCTGAGCAGCCACCGGAGCAGCAGCAGCAGCAGCTCGCCGCCGACGAGTCGCCGACGACGATGGGGTACACGTACACGCCGACGTACTACTCGGGCCTGCACGACACCATCGCGTCGCTGTGCAAGTCCATCCTCCCCTTCGGCGGCTTCAGGTCCGGCCGCCGCCTCACNGCCGACCAGGCCGCNGCNAGGCGCCACGNCGACGCGCTCAAGTNNGCAGCAGGAATCGTTCCACCGCATCNTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]


>consensus_847#0 CTCTCTCTCTCTCACGCTCCCCTCCTCGCCTCGCCTGAGCAGCCACCGGAGCAGCAGCAG CAGCAGCTCGCCGCCGACGAGTCGCCGACGACGATGGGGTACACGTACACGCCGACGTAC TACTCGGGCCTGCACGACGCCATCGCGTCGCTGTGCAAGTCCATCCTCCCCTTCGGCGGC TTCAGGTCCGGCCGCCGCCTCACCGCCGACCAGGCCGCGGCGAGGCGCCACGCCGACGCG CTCAAGTGGCAGCAGGAATCGTTCCGCCGCATCCTCCACCTCTCCGCGCTCCACCGCGAG GGCATCGTCCCGCCCTCCGACGTCGACGCCTTCCGCGCCGACATGCTCGCCACCCTCGCC GCCGCCCCGCCCCCGCCCGCCCACCCCGACCAGCCCGCCATCCTCCGCGACAAGCTCCTC TTCCTCCAGGAGCTCTTGTACGCCAAGTGCATCTCGGCGGCGGAGTACAACTCCACCAAG AGCCCACTCGTGCAGCGCCTCGCGGCGTTCGGTGTCGTGGTCGACTGCCCCGACGCGGAC GTCGGCGATGGCGGCGCGGCTTCGGCGGCGGCACCAGCCTCGTCGTCTTCCATGGAGGAG TGGTCGGAGATCGACCTCCGGGACCCGCCGCCCGCCGCGGCGGCCTCCGACAAGCCGAAG CACAAGGCCTTCGTCCCGCCATGGAAGAGCAGAGGCAAGAAGGAGCTGGACGCATCGAGG CCACCGTTAGCCCCCGTCGACCAGAACAACAGCAAGAACGCCCCATCCGTCCTCATGGCC GAGAGCTCGCCGTCGGAAGCCATGCCCACCGCCAAGACCGACAAGGGGAAGAGGAGGCAC CTGACGGCGATGTTCCACAACGGCGGCAATGGCAGCGAGAACAAGGAGCCCCCGGCGGCG TCCATGGAAGGCACAGATCAGGAGAAGGATGCGTCAAAGAGCAAGAAGAAGAGTTCGTGG GGGTTCGATGGCCTCAAGAAGTGGAAGAAGGCAAGCAACGATGAGGCGACGGCCGGCGGT GAGCGGCCGGAGCACGCTGCGCCGCGGTCTTCGTACAGTGAGTGCCGGCTTGAGGCGAGC CCGGCTGTTGCCAAGGATGCAAAGAGAGCCAAGAAGAAGCTGAATACGGCCACCGGCGAC GATGATTCTGCTTCCGATTTAGCGAATGATAAGGTTTTGGTGGAGAACACAAAGAAAGAG CTTTCAAGGATTCAGGCTGAGTTGTCATCCACCAACCGAAACTTGAACTTTTCGGATCAA CAAATTGAGGCCATCTCAACAAGGCTTCCAGTGGACAAATCTGACCTCAAGACCTTCTTC CCAAAGGCATGGTGCGATGAACACGGAGACAACGTGATCAACGTGGCGAAGAAAGAGTTC AAGGAGCACGTCGAAGAGATGGAGAAGCAGAGGGACATCACCGGCGGCGGTGATGGCTGG GTTGCATTCGGAGACAGCCATGACGAAAATTTCAACCCGAGAGCATTCTCTCAGCATCAG GCTGCAGTGAAGGGTAACGTCCATGACAGTCTTAGCAGCAGTCAACATTTCACAAACCCT TTCTATGACGAGAAGAATCCTTTCTTGACTCCAAGCTACGATTGATACTGCGAGTGAATG TAATTGGTCTTTTGTGTTGGAAATTTCTGTGATAGTTTTACCTCCAAGTTACTGATGTTG TACTTTAAGGTTCAATTGTTATATTGGACCTAGGTTGTGTATGAATTTTCTATGAATTAT GAGCTTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)