These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8470#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1792 fasta sequence [AATACTCGTGGTCGACCCACGCGTCCGCAACAAGCCAACCAAGAAGAGGAGAGGAGAAGAGAGGAGTCAAGAAACGCAAAAGGTTATCAACAGTAAGTACTCATTGAAGTATCACTTCTTCAGGAGTAGTATGGGTATTGAAATTGTACCTCAATCCTTCAATGAGGAGCTGGATTCTACTGTTACTATCACTCCTGCTAGTGACAACATAGATGTGTCTGATGATACAAGTGTTCCTCATCCATCAGAAGTGCCTGCCACAGTAAATGTTGTTCTAGTTGAGCAATCTGATAATTCAATCTCTGAACCTTTGGAATCTGATGGAGCCAATGGAGCTACAGAAAATGTTGTTCCCTTGGCAAGTGAGAAGTCTACTGACAACAATGATGCTATGAATTCAGAGCCAGTGAATTCAGAACCATATGAAGCATCTCCTGCTAATAATGCTGAAAAGGGAGATGTGATGCAGCAGAGTGATGAGAACAATGGTGATAAACAGGAAAATCAGGATCTGTTGTCTCCAATGGCAGAAACAGCAGGAAGTGACAGTACCTCAGTCACATCGATGGAAGATGTTCAAGAAGCAAAGGATGCTGCTCCATCAGAGACAGATGATGCTACTGGCCACCCTCCTGATCTGTCAAATGACAAAGCTTGTGCTGGAAATGGAAATGGAAATGTCTTCCAAAATGCAAAGTGTGTCTTGACAACTTCGACAAAGAAGATGAAGAGAAGTGCATCTGCAACTACAAGGAAGTCACTGCAAGCTACTAATACTGACGAAGGGAATGCTTCTACTCTCACCAACTCGAAATCATCAAATGGAAGGACCACAACAGTTCCAGCAGGCCCAGTTTTCAGATGTACTGAACGTGCCGAGAAGCGCAGAGAATTTTACATGAAGTTGGAGGAGAAGCACCAAGCTTTGGAGGAAGAGAAGATTCAGTTGGAGGCAAAATTGAAGAAAGAACAAGAGGAAGCACTGAAGCTGCTGAGGAAGAGCCTGACGTTCAAGGCCACACCAATGCCAAGCTTCTACCACGAGGCTCCTTCTCCCAAGGCTGAATACAAGAAGCTGCCGACGACGCGGCCCAAGTCGCCAAAGCTGGGGAGGAGGAAGGCCTCGACGGCGGCGGACGCCTCCAACTCGTCGGAGGAGAGCGACAGCACGCCGCGGCCGTGCTGCCGCGCCAGCCGCGACAGCCTCGACAGCATCTGCAAATGCAGCAGCAGCAGCAGAAACGGCAAGCCGCAGCAACCTGCAACCGCGAAGCCGGCAGCCTCCAAGAAGCAGCCCAAGCCACACGCCCACAAGCTCTCCGACCAGAGCGCCATGAACATCGCCGTCCACTAGCTGCTTCTCTCTCTGTCTCTCTCTTTCTTGCTTGGCTGCATGGATCAATCATGGAGGAAGGAACCAACCACCCAATTCAGGAGGAAAAAGAATCGAGTTCTTGTTTTTTTTCTTCTTCTTCTTCTCTAAGTAATTATTGGGAGTGATATGATGGGCTTCTGCAATCTTCAATCATGTGGTATTGGTGTAGATAATAAGTTATGATGATGATGATGCACAAGAGGGTTTGTGTGAGACTGCCTGCCATGGGTGAAGTTCAGAAGTGATGTTTTATTTTTAATTTATGCTGATTTTCACTTTGTTTATTTTGGGGATGTGAGAATGGCATGTGTCAGTCATAACTTCTTTTTCTTAATTTATGTGATGTGGGTGTTCTTGATGTAATTTATGTATTTATATATAATGTATATACTCACAATGCAAACAGAAGGCTTTGTT] [+] EMBL OSS10928A [AATACTCGTGGTCGACCCACGCGTCCGCAACAAGCCAACCAAGAAGAGGAGAGGAGAAGAGAGGAGTCAAGAAACGCAAAAGGTTATCAACAGTAAGTACTCATTGAAGTATCACTTCTTCAGGAGTAGTATGGGTATTGAAATTGTACCTCAATCCTTCAATGAGGAGCTGGATTCTACTGTTACTATCACTCCTGCTAGTGACAACATAGATGTGTCTGATGATACAAGTGTTCCTCATCCATCAGAAGTGCCTGCCACAGTAAATGTTGTTCTAGTTGAGCAATCTGATAATTCAATCTCTGAACCTTTTGAATCTGATGGAGCCAATGGAGCTACAGAAAATGTTGTTCC ] [+] EMBL AK068548 [ CAACAAGCCAACCAAGAAGAGGAGAGGAGAAGAGAGGAGTCAAGAAACGCAAAAGGTTATCAACAGTAAGTACTCATTGAAGTATCACTTCTTCAGGAGTAGTATGGGTATTGAAATTGTACCTCAATCCTTCAATGAGGAGCTGGATTCTACTGTTACTATCACTCCTGCTAGTGACAACATAGATGTGTCTGATGATACAAGTGTTCCTCATCCATCAGAAGTGCCTGCCACAGTAAATGTTGTTCTAGTTGAGCAATCTGATAATTCAATCTCTGAACCTTTGGAATCTGATGGAGCCAATGGAGCTACAGAAAATGTTGTTCCCTTGGCAAGTGAGAAGTCTACTGACAACAATGATGCTATGAATTCAGAGCCAGTGAATTCAGAACCATATGAAGCATCTCCTGCTAATAATGCTGAAAAGGGAGATGTGATGCAGCAGAGTGATGAGAACAATGGTGATAAACAGGAAAATCAGGATCTGTTGTCTCCAATGGCAGAAACAGCAGGAAGTGACAGTACCTCAGTCACATCGATGGAAGATGTTCAAGAAGCAAAGGATGCTGCTCCATCAGAGACAGATGATGCTACTGGCCACCCTCCTGATCTGTCAAATGACAAAGCTTGTGCTGGAAATGGAAATGGAAATGTCTTCCAAAATGCAAAGTGTGTCTTGACAACTTCGACAAAGAAGATGAAGAGAAGTGCATCTGCAACTACAAGGAAGTCACTGCAAGCTACTAATACTGACGAAGGGAATGCTTCTACTCTCACCAACTCGAAATCATCAAATGGAAGGACCACAACAGTTCCAGCAGGCCCAGTTTTCAGATGTACTGAACGTGCCGAGAAGCGCAGAGAATTTTACATGAAGTTGGAGGAGAAGCACCAAGCTTTGGAGGAAGAGAAGATTCAGTTGGAGGCAAAATTGAAGAAAGAACAAGAGGAAGCACTGAAGCTGCTGAGGAAGAGCCTGACGTTCAAGGCCACACCAATGCCAAGCTTCTACCACGAGGCTCCTTCTCCCAAGGCTGAATACAAGAAGCTGCCGACGACGCGGCCCAAGTCGCCAAAGCTGGGGAGGAGGAAGGCCTCGACGGCGGCGGACGCCTCCAACTCGTCGGAGGAGAGCGACAGCACGCCGCGGCCGTGCTGCCGCGCCAGCCGCGACAGCCTCGACAGCATCTGCAAATGCAGCAGCAGCAGCAGAAACGGCAAGCCGCAGCAACCTGCAACCGCGAAGCCGGCAGCCTCCAAGAAGCAGCCCAAGCCACACGCCCACAAGCTCTCCGACCAGAGCGCCATGAACATCGCCGTCCACTAGCTGCTTCTCTCTCTGTCTCTCTCTTTCTTGCTTGGCTGCATGGATCAATCATGGAGGAAGGAACCAACCACCCAATTCAGGAGGAAAAAGAATCGAGTTCTTGTTTTTTTTCTTCTTCTTCTTCTCTAAGTAATTATTGGGAGTGATATGATGGGCTTCTGCAATCTTCAATCATGTGGTATTGGTGTAGATAATAAGTTATGATGATGATGATGCACAAGAGGGTTTGTGTGAGACTGCCTGCCATGGGTGAAGTTCAGAAGTGATGTTTTATTTTTAATTTATGCTGATTTTCACTTTGTTTATTTTGGGGATGTGAGAATGGCATGTGTCAGTCATAACTTCTTTTTCTTAATTTATGTGATGTGGGTGTTCTTGATGTAATTTATGTATTTATATATAATGTATATACTCACAATGCAAACAGAAGGCTTTGTT] [+] EMBL CB644434 [ AACCAACAAGAGGAGAGGAGAAGAGAGGAGTCAAGAAACGCAAAAGGTTATCAACAGTAAGTACTCATTGAAGTATCACTTCTTCAGGAGTAGTATGGGTATTGAAATTGTACCTCAATCCTTCAATGAGGAGCTGGATTCTACTGTTACTATCACTCCTGCTAGTGACAACATAGATGTGTCTGATGATACAAGTGTTCCTCATCCATCAGAAGTGCCTGCCACAGTAAATGTTGTTCTAGTTGAGCAATCTGATAATTCAATCTCTGAACCTTTGGAATCTGATGGAGCCAATGGAGCTACAGAAAATGTTGTTCCCTTGGCAAGTGAGAAGTCTACTGACAACAATGATGCTATGAATTCAGAGCCAGTGAATTCAGAACCATATGAAGCATCTCCTGCTAATAATGCTGAAAAGGGAGATGTGATGCAGCAGAGTGATGAGAACAATGGTGATAAACAGGAAAATCAGGATCTGTTGTCTCCAATGGCAGAAACAGCAGGAAGTGACAGTACCTCAGTCACATCGATGGAAGATGTTCAAGAAGCAAAGGATGCTGCTCCATCAGAGACAGATGATGCTACTGGCCACCCTCCTGATCTGTCAAATGACAAAGCTTGTGCTGGAAATGGAAATGGAAATGTCTTCCAAAATGCAAAGTGTGTCTTGACAACTTCGACAAAGAAGATGAAGAGAAGTGCATCTGCAACTACAAGGAAGTCACTGCAAGCTACTAATACTGACGAAGGGAATGCTTCTACT ] [-] EMBL CB644435 [ AAGGACCACAACAGTTCCAGCAGGCCCAGTTTTCAGATGTACTGAACGTGCCGAGAAGCGCAGAGAATTTTACATGAAGTTGGAGGAGAAGCACCAAGCTTTGGAGGAAGAGAAGATTCAGTTGGAGGCAAAATTGAAGAAAGAACAAGAGGAAGCACTGAAGCTGCTGAGGAAGAGCCTGACGTTCAAGGCCACACCAATGCCAAGCTTCTACCACGAGGCTCCTTCTCCCAAGGCTGAATACAAGAAGCTGCCGACGACGCGGCCCAAGTCGCCAAAGCTGGGGAGGAGGAAGGCCTCGACGGCGGCGGACGCCTCCAACTCGTCGGAGGAGAGCGACAGCACGCCGCGGCCGTGCTGCCGCGCCAGCCGCGACAGCCTCGACAGCATCTGCAAATGCAGCAGCAGCAGCAGAAACGGCAAGCCGCAGCAACCTGCAACCGCGAAGCCGGCAGCCTCCAAGAAGCAGCCCAAGCCACACGCCCACAAGCTCTCCGACCAGAGCGCCATGAACATCGCCGTCCACTAGCTGCTTCTCTCTCTGTCTCTCTCTTTCTTGCTTGGCTGCATGGATCAATCATGGAGGAAGGAACCAACCACCCAATTCAGGAGGAAAAAGAATCGAGTTCTTGTTTTTTTTCTTCTTCTTCTTCTCTAAGTAATTATTGGGAGTGATATGATGGGCTTCTGCAATCTTCAATCATGTGGTATTGGTGTAGATAATAAGTTATGATGATGATGATGCACAAGAGGGTTTGTGTGAGACTGCCTGCCATGGGTGAAGTTCAGAAGTGATGTTTTATTTTTAAaaaaaaaaa ] [+] EMBL AU085997 [ CGGCAGCCTCCAAGAAGCAGCCNAAGCCACACGCCCACAAGCTCTCCGACCAGAGCGCCNTGAACATCGCCGTCCACTAGCNGCTTCTCTCTCTGTCNCTCTCTTTCTTGCTTGGCTGCATGGATCAATCATGGAGGAAGGNACCAACCACCCAATTCAGGAGGAAAAAGAATCGAGTTCTTGTTTTTNTTCTNCTTCTTCTTCTCTAAGTAATTATTGGGAGTGATATGATGGGCTTCTGCAATCTTCAATCATGTGGTATTGGTGTAGATAATAAGTTATGATGATGATGATGCACAAGAGGGTTTGTGTGAGACTGCCTGCCATGGGTGAAGTTCAGAAGTGATGTTNTATTTTTAATTTATGCTGATTTTCACTTTGTTTATTTTGGGGATGTGAGAATGGCATGTGTCAGTCATAACTTCTTTTTCTTAATTTATGTGATGTGGGTGTTCTTGATGTAAaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||