cluster # 8471

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Oryza sativa
cluster # 8471 cluster # 8471 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8471#0 length = 1584 sequences # 5
consensusID : consensus_8471#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1584
fasta sequence
                              [CCATTCTTCCCAACCATCTCCACCTTCCCCGCATCCGCAGTCGCCGCCGATCTCCCTCTCCGCTGTCGGAGACGACGCGGCCACCAAACCCTAGCCGCAGCAGCAGCAGCAGCCGCCCATGGCGAGCTCACGCGCGGATCCCCGCCCGCTGGCATGACCGCAGCGGCCGCCGATGGAGCCGGGGCCTTCGTCGCCGTCGCCGTCGTCCGCGTGCGCGGATCACCCCACGCCGGCGCCGGAGGAGGACGAGGAGGGGGGGAGGGGGTGGGTGGTCGTGCCGGCGAGCGAGGTCCCGGGAGCCGACGCGCCCAAGGTCATCGACTGGGAGGACCTGCAGCAGGAGCTCGCACGCGTCTGGAGCCTCTCCGCCGCGCTCGCCACCGCCAGGGAACGCAAGGCGCTGCTCGCCGCGCGCCTCCAGTCCGCGCTCGAGGCAAGGAAGGCTTCCGTTCAGCAGGATAATGAGTTGGCGGAAATCAGGGAAAGAGTGCAAGCACGTGCTGATTTCAT-GTGGGATTTGAAAATGCACACTAAGAAAATGA-CCGAGGATGTGGATGATCGAAGAGAGGAACTCCGCATCAAGATCCGAACCTTGTCAACAACAAGCAATACTCTTAGCACAGCGCGAAATAAACTTAAGGAAGCTGATAAATTGCTGTCAGGGGAAAATGGTCTCCATGTCCGTCTTAAAACTGTGGAAAGGATGTTGCGCACAAGACAGCAATATATGACAGCACAAGTAGCACATTTATATCCTGTGAGACCCTTGATTGAGCGATCTCCAGCTAACAAGCCTAGCTTCTTGAACTCCAGTATTCTCAAAACCAGAGATGCGGAATCAATGGCTCCGAATGGTTCTCAAAATGGACAGGCACCTTTGGCAATTTTGGGTCTCCAACTATCGAAGCTTACGATGAAAAAGACTGGCTACTTTAGTGACAAGACTGAGATTCAGAATTCTGCCACCGCATTGGGTTATGTTGCACATGCAGTGTCCCTTATTGCATCATATCTTGATGTTCCTCTTCGATATCCGCTGCGGTTGGGAGGTTCACGGTCATATGTTCTTGATCGCGCGCCCTCAGTTGAGTCATCGTCCTTAGCTTCTGCTATAAGTTCTGCTCCTCTGAGTACAACCATGCGAACAATGGAATTCCCTCTGTTTTTTGAAAGCCAGGAGACAACAAGATCAGCATATG-CAATATTTTTGCTAAACAAGGATATTGAACAACTTCTGAATCA-CATTGGTGCTGAAAGTCTTGGCCCGAGGCATGTATTAGCTAACCTCAAGCAGCTGACTACTATTGTCCAGTCACAGCAGTACATTTCTAATTAATTTAGTCCCAGAAACATATTTGAAGTTCTGTGAGAGTTTTGCTTACGGCTAAATCCAGAAGCGGTTGGTGCTATTTTTAGCAAGCACCTTTGTTTTCCAGAACACAGATGAGTTAAGGTTTTTCTTTGCTGATATGTTCACTGTAAAATGGATAAATGGATTTGTCACTGTAAAATGTGCTCACTTGGTGTACAGGAAATAGATGAGTAATAAATGAGAAATAGTTTGCATGTTCAAAAAAAAAAAAA]

[+] EMBL AK107114             [CCATTCTTCCCAACCATCTCCACCTTCCCCGCATCCGCAGTCGCCGCCGATCTCCCTCTCCGCTGTCGGAGACGACGCGGCCACCAAACCCTAGCCGCAGCAGCAGCAGCAGCCGCCCATGGCGAGCTCACGCGCGGATCCCCGCCCGCTGGCATGACCGCAGCGGCCGCCGATGGAGCCGGGGCCTTCGTCGCCGTCGCCGTCGTCCGCGTGCGCGGATCACCCCACGCCGGCGCCGGAGGAGGACGAGGAGGGGGGGAGGGGGTGGGTGGTCGTGCCGGCGAGCGAGGTCCCGGGAGCCGACGCGCCCAAGGTCATCGACTGGGAGGACCTGCAGCAGGAGCTCGCACGCGTCTGGAGCCTCTCCGCCGCGCTCGCCACCGCCAGGGAACGCAAGGCGCTGCTCGCCGCGCGCCTCCAGTCCGCGCTCGAGGCAAGGAAGGCTTCCGTTCAGCAGGATAATGAGTTGGCGGAAATCAGGGAAAGAGTGCAAGCACGTGCTGATTTCAT GTGGGATTTGAAAATGCACACTAAGAAAATGA CCGAGGATGTGGATGATCGAAGAGAGGAACTCCGCATCAAGATCCGAACCTTGTCAACAACAAGCAATACTCTTAGCACAGCGCGAAATAAACTTAAGGAAGCTGATAAATTGCTGTCAGGGGAAAATGGTCTCCATGTCCGTCTTAAAACTGTGGAAAGGATGTTGCGCACAAGACAGCAATATATGACAGCACAAGTAGCACATTTATATCCTGTGAGACCCTTGATTGAGCGATCTCCAGCTAACAAGCCTAGCTTCTTGAACTCCAGTATTCTCAAAACCAGAGATGCGGAATCAATGGCTCCGAATGGTCCTCAAAATGGACAGGCACCTTTGGCAATTTTGGGTCTCCAACTATCGAAGCTTACGATGAAAAAGACTGGCTACTTTAGTGACAAGACTGAGATTCAGAATTCTGCCACCGCATTGGGTTATGTTGCACATGCAGTGTCCCTTATTGCATCATATCTTGATGTTCCTCTTCGATATCCGCTGCGGTTGGGAGGTTCACGGTCATATGTTCTTGATCGCGCGCCCTCAGTTGAGTCATCGTCCTTAGCTTCTGCTATAAGTTCTGCTCCTCTGAGTACAACCATGCGAACAATGGAATTCCCTCTGTTTTTTGAAAGCCAGGAGACAACAAGATCAGCATATG CAATATTTTTGCTAAACAAGGATATTGAACAACTTCTGAATCA CATTGGTGCTGAAAGTCTTGGCCCGAGGCATGTATTAGCTAACCTCAAGCAGCTGACTACTATTGTCCAGTCACAGCAGTACATTTCTAATTAATTTAGTCCCAGAAACATATTTGAAGTTCTGTGAGAGTTTTGCTTACGGCTAAATCCAGAAGCGGTTGGTGCTATTTTTAGCAAGCACCTTTGTTTTCCAGAACACAGATGAGTTAAGGTTTTTCTTTGCTGATATGTTCACTGTAAAATGGATAAATGGATTTGTCACTGTAAAATGTGCTCACTTGGTGTACAGGAAATAGATGAGTAATAAATGAGAAATAGTTTGCA                  ]
[+] EMBL AU166585             [                                                                                                                                                                                                                                                                                                                                                                GTCTGGAGCCTCTCCGCCGCGCTCGCCACCGCCAGGGAACGCAAGGCGCTGCTCGCCGCGCGCCTCCAGTCCGCGCTCGAGGCAAGGAAGGCTTCCGTTCAGCAGGATAATGAGTTGGCGGAAATCAGGGAAAGAGTGCAAGCACGTGCTGATTTCATNGTGGGATTTGAAAATGCACACTAAGAAAATGACCCGAGGATGTGGATGATCGAAGAGAGGAACTCCGCATCAAGATCCGAACCTTGTCAACAACAAGCAATACTCTTAGCACAGCGCGAAATAAACTTAANGAAGCTGATAAATTGCTGTCANGGGAAAATGGTCTCCATGTCCGTCTTAAAACTGGGGAAAGGATGTTGCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA997995             [                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCCGTTCAGCAGGATAATGAGTTGGCGGAAATCAGGGAAAGAGTGCAAGCACGTGCTGATTTCAT GTGGGATTTGAAAATGCACACTAAGAAAATGA CCGAGGATGTGGATGATCGAAGAGAGGAACTCCGCATCAAGATCCGAACCTTGTCAACAACAAGCAATACTCTTAGCACAGCGCGAAATAAACTTAAGGAAGCTGATAAATTGCTGTCAGGGGAAAATGGTCTCCATGTCCGTCTTAAAACTGTGGAAAGGATGTTGCGCACAAGACAGCAATATATGACAGCACAAGTAGCACATTTATATCCTGTGAGACCCTTGATTGAGCGATCTCCAGCTAACAAGCCTAGCTTCTTGAACTCCAGTATTCTCAAAACCAGAGATGCGGAATCAATGGCTCCGAATGGTTCTCAAAATGGACAGGCACCTTTGGCAATTTTGGGTCTCCAACTATCGAAGCTTACGATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA767002             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           gggGATCGAAGAGAGGAACTCCGCATCAAGATCCGAACCTTGTCAACAACAAGCAATACTCTTAGCACAGCGCGAAATAAACTTAAGGAAGCTGATAAATTGCTGTCAGGGGAAAATGGTCTCCATGTCCGTCTTAAAACTGTGGAAAGGATGTTGCGCACAAGACAGCAATATATGACAGCACAAGTAGCACATTTATATCCTGTGAGACCCTTGATTGAGCGATCTCCAGCTAACAAGCCTAGCTTCTTGAACTCCAGTATTCTCAAAACCAGAGATGCGGAATCAATGGCTCCGAATGGTTCTCAAAATGGACAGGCACCTTTGGCAATTTTGGGTCTCCAACTATCGAAGCTTACGATGAAAAAGACTGGCTACTTTAGTGACAAGACTGAGATTCAGAATTCTGCCACCGCATTGGGTTATGTTGCACATGCAGTGTCCCTTATTGCATCATATCTTGATGTTCCTCTTCGATATCCGCTGCGGTTGGGAGGTTCACGGTCATATGTTCTTGATCGCGCGCCTTCAGTTGAGTCATCGTCCTTAGCTTCTGCTATAAGTTCTGCCCCTCTGAGTACAACCATGCGAACAATGGAATTCCCTCTGTTTTTTGAAAGCCAGGAGACAACAAGATCAGCATATG CAATATTTTTGCTAAACAAGGATATTGAACAACTTCTGAATCA CATTGGTGCTGNAAGTCTTGGCCCGAGGCATGTATTAGCTAACCTCAAGCAGCTGACTACTATTGNCCAGTCACAGCAGTACATTTCTAATNAA TTAGTCCCAAAAACATANTTGAAGTTCTGGGAGAGNTTTGCTTACCGGTNAATCCA AANCGGNTGGNGCTATTTTTANC AGCACCNTTGNTTTCan                                                                                                                                                     ]
[+] EMBL AU166584             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACCATGCGAACAATGGAATTCCNTCTGTTTTTTGAAAGCCAGGAGNCAACAAGATCAGCATATGCCAATATTTTTGCTAACCAAGGATATTGANCAACTTCTGAATCACCATTGGTGCTGAAAGTCTTGGCCCGAGGCATGTATTAGCTAACCTCAAGCAGCTGACTACTATTGTCCAGTCNCAGCAGTACATTTCTAATTAATTTAGTCCCAGAAACATATTTGAAGTTCTGTGAGAGTTTTGCTTACGGCTAAATCCAGAAGCGGTTGGTGCTATTTTTAGCAAGCNCCTTTGTTTTCCAGAACNCAGATGAGTTAAGGTTTTTCTTTGCTGATATGTTCACTGTAAAATGGATAAATGGATTTGTCNCTGTAAAATGTGCTCACTTGGTGTACAGGAAATAGATGAGTAATAAATGAGAAATAGTTTGCATGTTCAAAAAAAAAAAAA]




>consensus_8471#0
CCATTCTTCCCAACCATCTCCACCTTCCCCGCATCCGCAGTCGCCGCCGATCTCCCTCTC
CGCTGTCGGAGACGACGCGGCCACCAAACCCTAGCCGCAGCAGCAGCAGCAGCCGCCCAT
GGCGAGCTCACGCGCGGATCCCCGCCCGCTGGCATGACCGCAGCGGCCGCCGATGGAGCC
GGGGCCTTCGTCGCCGTCGCCGTCGTCCGCGTGCGCGGATCACCCCACGCCGGCGCCGGA
GGAGGACGAGGAGGGGGGGAGGGGGTGGGTGGTCGTGCCGGCGAGCGAGGTCCCGGGAGC
CGACGCGCCCAAGGTCATCGACTGGGAGGACCTGCAGCAGGAGCTCGCACGCGTCTGGAG
CCTCTCCGCCGCGCTCGCCACCGCCAGGGAACGCAAGGCGCTGCTCGCCGCGCGCCTCCA
GTCCGCGCTCGAGGCAAGGAAGGCTTCCGTTCAGCAGGATAATGAGTTGGCGGAAATCAG
GGAAAGAGTGCAAGCACGTGCTGATTTCATGTGGGATTTGAAAATGCACACTAAGAAAAT
GACCGAGGATGTGGATGATCGAAGAGAGGAACTCCGCATCAAGATCCGAACCTTGTCAAC
AACAAGCAATACTCTTAGCACAGCGCGAAATAAACTTAAGGAAGCTGATAAATTGCTGTC
AGGGGAAAATGGTCTCCATGTCCGTCTTAAAACTGTGGAAAGGATGTTGCGCACAAGACA
GCAATATATGACAGCACAAGTAGCACATTTATATCCTGTGAGACCCTTGATTGAGCGATC
TCCAGCTAACAAGCCTAGCTTCTTGAACTCCAGTATTCTCAAAACCAGAGATGCGGAATC
AATGGCTCCGAATGGTTCTCAAAATGGACAGGCACCTTTGGCAATTTTGGGTCTCCAACT
ATCGAAGCTTACGATGAAAAAGACTGGCTACTTTAGTGACAAGACTGAGATTCAGAATTC
TGCCACCGCATTGGGTTATGTTGCACATGCAGTGTCCCTTATTGCATCATATCTTGATGT
TCCTCTTCGATATCCGCTGCGGTTGGGAGGTTCACGGTCATATGTTCTTGATCGCGCGCC
CTCAGTTGAGTCATCGTCCTTAGCTTCTGCTATAAGTTCTGCTCCTCTGAGTACAACCAT
GCGAACAATGGAATTCCCTCTGTTTTTTGAAAGCCAGGAGACAACAAGATCAGCATATGC
AATATTTTTGCTAAACAAGGATATTGAACAACTTCTGAATCACATTGGTGCTGAAAGTCT
TGGCCCGAGGCATGTATTAGCTAACCTCAAGCAGCTGACTACTATTGTCCAGTCACAGCA
GTACATTTCTAATTAATTTAGTCCCAGAAACATATTTGAAGTTCTGTGAGAGTTTTGCTT
ACGGCTAAATCCAGAAGCGGTTGGTGCTATTTTTAGCAAGCACCTTTGTTTTCCAGAACA
CAGATGAGTTAAGGTTTTTCTTTGCTGATATGTTCACTGTAAAATGGATAAATGGATTTG
TCACTGTAAAATGTGCTCACTTGGTGTACAGGAAATAGATGAGTAATAAATGAGAAATAG
TTTGCATGTTCAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case