cluster # 8485

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Oryza sativa
cluster # 8485 cluster # 8485 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8485#0 length = 1310 sequences # 5
consensusID : consensus_8485#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1310
fasta sequence
                              [TCTTTTTTTTACAGGCGAACATTATTTTTATTTTGTTTTCATACCATATACTAATGCTAATAATGCTCACATTTTATTAATCTTCTTCCAGTTCAG-GCTAACAACAAACAGCTGCTACGCTATACCAAAAACATATACGAATTTGTTTCTCAATGCAAAAGTTCTTTCCCGAAGAGCCCAGCAATGGCTCGTCCA-GGGTCGTCTTGCTTGACCAGGGATTCTCCCACCAAAACAGCGGAAACTCCAGCATTTTGCACATAAGCAACGTCATC-TGGG-TTGAACA-GCCCTGATTCGCCAACAACCAATATTCCCTTCTCCCTGATGGTATCACCATGCATATCTAGCAACATCTTTGTG-TTTGAAGTATCGACAACAAATGTTTCAAGGCTGCGGTTATTGATGCCAATAAGCTGAACTCCACTTATATTCAGCACACGCTCCATCTCCCTTTCATCATGAACCT-CAATAAGAGC-TGT-CATTCCCAACTCC-TTACATATGCGAAGGAAGTACTTTATGTCGAGATCAGGTAGCACAGCGGCAATAAGCAGAATTGCATCTGCGCCCTGAGAGCGGGCATAATAGATCTGCCATTTATCGATGACAAACTCTTTGCATAGGAGAGGGCACTTCACTCCTGACTTCCGCACCTTTGCGAGATTTTCAAAACTTCCCTGAAAATACTTCTCATCGGTCAAGATGCTCAAGCATGCAGCACCATTCTTTTCATAAGCCTGAGCAATTTCAACAGGATTGAAGTTCTCCCTGAGCACACCCCTACTTGGCGATGCCTTCTTGACCTCAGCGATCAACGCTGGCATACCATTGCGCTTGAAGGCTGATGCTAAAGCACCGTAGAAGTCTCTTGCAGGAGGAGCCTGCCCTGCAGCCTCAATCACCTCCTTGAGAGGCTTCTTGGCATGCCCCTCGGCTACCTCAACCTCCTTGTCCCAAATGATCTTCTCCAGGATGTTGCGGGGAGCACCCAGCTCCTCCTCGATCTCCTTCAAGGGGACATTGGGACGGCAGTGCCTGCGGATGCGGATCCCTTGACTAGCCGCTATGTCGTTGATCGACTTGCCGTTCTCCCACTGCGCTAGCTCCACCGCGTTCACCATGTCGTCCTGCGCTAGCTCCTCGAGTATGGAGTCCTTGGCCCCGCAGCGGAGGAGCGAGCGGGCGCGGGCGCGGGCGCCGGCGCCGGCGGGCGTGACGGCGAGGCGAGCCCGCGACGGGGAGCGGGAGGCGGAGGAGGCGCCGGGAAAGGAAGCCCTGTAGACAGAGGGCGAGGCGAGGAGGGACTCCATAGGGCG]

[+] EMBL CB618921             [TCTTTTTTTTACAGGCGAACATTATTTTTATTTTGTTTTCATACCATATACTAATGCTAATAATGCTCACATTTTATTAATCTTCTTCCAGTTCAG GCTAACAACAAACAGCTGCTACGCTATACCAAAAACATATACGAATTTGTTTCTCAATGCAAAAGTTCTTTCCCGAAGAGCCCAGCAATGGCTCGTCCA GGGTCGTCTTGCTTGACCAGGGATTCTCCCACCAAAACAGCGGAAACTCCAGCATTTTGCACATAAGCAACGTCATC TGGG TTGAACA GCCCTGATTCGCCAACAACCAATATTCCCTTCTCCCTGATGGTATCACCATGCATATCTAGCAACATCTTTGTG TTTGAAGTATCGACAACAAATGTTTCAAGGCTGCGGTTATTGATGCCAATAAGCTGAACTCCACTTATATTCAGCACACGCTCCATCTCCCTTTCATCATGAACCT CAATAAGAGC TGT CATTCCCAACTCC TTACATATGCGAAGGAAGTACTTTATGTCGAGATCAGGTAGCACAGCGGCAATAAGCAGAATTGCATCTGCGCCCTGAGAGCGGGCATAATAGATCTGCCATTTATCGATGACAAACTCTTTGCATAGGAGAGGGCACTTCACTCCTGACTTCCGCACCTTTGCGAGATTTTCAAAACTTCCCTGAAAATACTTCTCATCGGTCAAGATGCTCAAGCATGCAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL BI813236             [    TTTTTTACAGGCGAACATTATTTTTATTTTGTTTTCATACCATATACTAATGCTAATAATGCTCACATTTTATTAATCTTCTTCCAGTTCAGTGCTAACAACAAACAGCTGCTACGCTATACCAAAAACATATACGAATTTGTTTCTCAATGCAAAAGTTCTTTCCCGAAGAGCCCAGCAATGGCTCGTCCAGGGGTCGTCTTGCTTGACCAGGGATTCTCCCACCAAAACAGCGGAAACTCCAGCATTTTGGACATAAGCAACGTCATCTTGGGTTTGAACATGCCCTGATTCGCCAACAA CAATATTCCCTTCTCCCTGATGGTATCACCATGCATATCTAGCAACATCTTTGTGTTTTGAAGTATCGACAACAAATGTTTCAAGGGTGCGGGTATTGATGCCAATAAGCTGAACTCCACTTATATTCAGCACACGCTCCATCTCCCTTTCATCATGAACCTCCAATAAGAGCTTGTGCATTCCCAA TCCTTTACATATGCGAAGGAAGTACTTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB618960             [                   CATTATTTTTATTTTGTTTTCATACCATATACTAATGCTAATAATGCTCACATTTTATTAATCTTCTTCCAGTTCAG GCTAACAACAAACAGCTGCTACGCTATACCAAAAACATATACGAATTTGTTTCTCAATGCAAAAGTTCTTTCCCGAAGAGCCCAGCAATGGCTCGTCCA GGGTCGTCTTGCTTGACCAGGGATTCTCCCACCAAAACAGCGGAAACTCCAGCATTTTGCACATAAGCAACGTCATC TGGG TTGAACA GCCCTGATTCGCCAACAACCAATATTCCCTTCTCCCTGATGGTATCACCATGCATATCTAGCAACATCTTTGTG TTTGAAGTATCGACAACAAATGTTTCAAGGCTGCGGTTATTGATGCCAATAAGCTGAACTCCACTTATATTCAGCACACGCTCCATCTCCCTTTCATCATGAACCT CAATAAGAGC TGT CATTCCCAACTCC TTACATATGCGAAGGAAGTACTTTATGTCGAGATCAGGTAGCACAGCGGCAATAAGCAGAATTGCATCTGCGCCCTGAGAGCGGGCATAATAGATCTGCCATTTATCGATGACAAACTCTTTGCATAGGAGAGGGCACTTCACTCCTGACTTCCGCACCTTTGCGAGATTTTCAAAACTTCCCTGAAAATACTTCTCATCGGTCAAGATGCTCAAGCATGCAGCACCATTCTTTTCATAAGCCTGAGCAATTTCAACAGGATTGAAGTTCTCCCTGAGCACACCCCTACTTGGCGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB618959             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGATCTGCCATTTATCGATGACAAACTCTTTGCATAGGAGAGGGCACTTCACTCCTGACTTCCGCACCTTTGCGAGATTTTCAAAACTTCCCTGAAAATACTTCTCATCGGTCAAGATGCTCAAGCATGCAGCACCATTCTTTTCATAAGCCTGAGCAATTTCAACAGGATTGAAGTTCTCCCTGAGCACACCCCTACTTGGCGATGCCTTCTTGACCTCAGCGATCAACGCTGGCATACCATTGCGCTTGAAGGCTGATGCTAAAGCACCGTAGAAGTCTCTTGCAGGAGGAGCCTGCCCTGCAGCCTCAATCACCTCCTTGAGAGGCTTCTTGGCATGCCCCTCGGCTACCTCAACCTCCTTGTCCCAAATGATCTTCTCCAGGATGTTGCGGGGAGCACCCAGCTCCTCCTCGATCTCCTTCAAGGGGACATTGGGACGGCAGTGCCTGCGGATGCGGATCCCTTGACTAGCCGCTATGTCGTTGATCGACTTGCCGTTCTCCCACTGCGCTAGCTCCACCGCGTTCACCATGTCGTCCTGCGCTAGCTCCTCGAGTATGGAGTCCTTGGCCCCGCAGCGGAGGAGCGAGCGGGCGCGGGCGCGGGCGCCGGCGCCGGCGGGCGTGACGGCGAGGCGAGCCCGCGACGGGGAGCGGGAGGCGGAGGAGGCGCCGGGAAAGGAAGCCCTGTAGACAGAGGGCGAGGCGAGGAGGGACTCCATAGGGCG]
[-] EMBL CB618920             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAGCATGCAGCACCATTCTTTTCATAAGCTTGAGCAATTTCAACAGGATTGAAGTTCTCCCTGAGCACACCCGTACTTGGCGATGCCTTCTTGACCTCAGCGATCAACGCTGGCATACCATTGCGCTTGAAGGCTGATGTTAAAGCACCGTAGAAGTCTCTTGCAGGAGGAGCCTGCCCTGCAGCCTCAATCACCTCCTTGAGAGGCTTCTTGGCATGCCCCTCGGCTACCTCAACCTCCTTGTCCCAAATGATCTTCTCCAGGATGTTGCGGGGAGCACCCAGCTCCTCCTCGATCTCCTTCAAGGGGACATTGGGACGGCAGTGCCTGCGGATGCGGATCCCTTGACTAGCCGCTATGTCGTTGATCGACTTGCCGTTCTCCCACTGCGCTAGCTCCACCGCGTTCACCATGTCGTCCTGCGCTAGCTCCTCGAGTATGGAGTCCTTGGCCCCGCAGCGGAGGAGCGAGCGGGCGCGGGCGCGGGCGCCGGCGCCGGCGGGCGTGACGGCGAGGCGAGCCCGCGACGGGGAGCGGGAGGCGGAGGAGGCGCCGGGAAAGGAAGCCCTGTAGACAGAGGGCGAGGCGAGGAGGGACTCCATcgcacg]




>consensus_8485#0
TCTTTTTTTTACAGGCGAACATTATTTTTATTTTGTTTTCATACCATATACTAATGCTAA
TAATGCTCACATTTTATTAATCTTCTTCCAGTTCAGGCTAACAACAAACAGCTGCTACGC
TATACCAAAAACATATACGAATTTGTTTCTCAATGCAAAAGTTCTTTCCCGAAGAGCCCA
GCAATGGCTCGTCCAGGGTCGTCTTGCTTGACCAGGGATTCTCCCACCAAAACAGCGGAA
ACTCCAGCATTTTGCACATAAGCAACGTCATCTGGGTTGAACAGCCCTGATTCGCCAACA
ACCAATATTCCCTTCTCCCTGATGGTATCACCATGCATATCTAGCAACATCTTTGTGTTT
GAAGTATCGACAACAAATGTTTCAAGGCTGCGGTTATTGATGCCAATAAGCTGAACTCCA
CTTATATTCAGCACACGCTCCATCTCCCTTTCATCATGAACCTCAATAAGAGCTGTCATT
CCCAACTCCTTACATATGCGAAGGAAGTACTTTATGTCGAGATCAGGTAGCACAGCGGCA
ATAAGCAGAATTGCATCTGCGCCCTGAGAGCGGGCATAATAGATCTGCCATTTATCGATG
ACAAACTCTTTGCATAGGAGAGGGCACTTCACTCCTGACTTCCGCACCTTTGCGAGATTT
TCAAAACTTCCCTGAAAATACTTCTCATCGGTCAAGATGCTCAAGCATGCAGCACCATTC
TTTTCATAAGCCTGAGCAATTTCAACAGGATTGAAGTTCTCCCTGAGCACACCCCTACTT
GGCGATGCCTTCTTGACCTCAGCGATCAACGCTGGCATACCATTGCGCTTGAAGGCTGAT
GCTAAAGCACCGTAGAAGTCTCTTGCAGGAGGAGCCTGCCCTGCAGCCTCAATCACCTCC
TTGAGAGGCTTCTTGGCATGCCCCTCGGCTACCTCAACCTCCTTGTCCCAAATGATCTTC
TCCAGGATGTTGCGGGGAGCACCCAGCTCCTCCTCGATCTCCTTCAAGGGGACATTGGGA
CGGCAGTGCCTGCGGATGCGGATCCCTTGACTAGCCGCTATGTCGTTGATCGACTTGCCG
TTCTCCCACTGCGCTAGCTCCACCGCGTTCACCATGTCGTCCTGCGCTAGCTCCTCGAGT
ATGGAGTCCTTGGCCCCGCAGCGGAGGAGCGAGCGGGCGCGGGCGCGGGCGCCGGCGCCG
GCGGGCGTGACGGCGAGGCGAGCCCGCGACGGGGAGCGGGAGGCGGAGGAGGCGCCGGGA
AAGGAAGCCCTGTAGACAGAGGGCGAGGCGAGGAGGGACTCCATAGGGCG
clustalw multiple alignements is not computed in this case