cluster # 8493

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Oryza sativa
cluster # 8493 cluster # 8493 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8493#0 length = 1316 sequences # 5
consensusID : consensus_8493#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1316
fasta sequence
                              [CGCTCTTCCCCTCAATCAATCAAGCTTAAGCTAAGCTGGGCGCGACAGCGAGAGAGAAACGAGGGATCGATCGCGTCCACGCACGCCCGATCCCGGCCGCGAGATGAGCTTCCGCGGCGAGGAGAGCGGCGGCGAGGATGGGGGGCGGACGGCGTCGGCGTCGGACCTGCGGAAGCCGTTCCTCCACACGGGGAGCTGGTACAAGATGTCGTCGGCGGGCGGCGGCGGCGGGATGGGGTCGCGCCTCGGCTCCTCCGCCTACTCCCTCCGCGACTCCTCCGTCTCCGCCGTCCTCTGCACCCTCATCGTCGCCCTCGGCCCCATCCAGTTCGGCTTCACCTGCGGCTTCTCCTCGCCCACCCAGGACGCCATCATCTCCGACCTCGGCCTCACCCTCTCCGAGTTCTCGCTGTTCGGGTCGCTGTCGAACGTCGGGGCAATGGTGGGCGCCATCG-CAGCGGCCAGATCGCCGAGTACATCGGCCGCAAGGGGTCTCTCATGATCGCGGCAATTCCTAACATTATTGGGTGGCTCGCAATATC-TTTTGCAAAGGACTCATCCTTTTTGTTTATGGGCCGA-TTGCTGG-AAGGA-TTTGGGGTCGGCGTGATATCCTATGTGGTGCCAGTTTATATAGCAGAAATTGCTCCACAAACAATGAGAGGAGCTCTTGGTTCAGTCAATCAGCTTTCTGTTACTATTGGCATATTGCTTGCCTACTTGTTAGGCATGTTTGTTCCCTGGAGAATTCTCTCCGTTCTCGGTATTTTACCATGTTCAATTCTGATACCTGGATTGTTCTTTATCCCTGAATCACCAAGGTGGCTGGCAAAAATGGGAAAGATGGAGGATTTTGAATCCTCGCTGCAAGTATTGCGAGGATTTGAAACAGACATCGCTGTAGAAGTAAATGAAATAAAGAGAACAGTTCAATCATCACGGAGGAGGACGACAATACGATTTGCAGATATCAAGCAGAAGAGATATAGTGTACCTCTAATGATAGGAATTGGTCTCCTTGTACTGCAGCAGTTAAGTGGTGTGAATGGCATTCTATTTTATGCTGCTAGTATCTTCAAAGCCGCCGGTCTTACGAATAGTAATCTAGCAACATTTGGTCTGGGGGTTGTTCAGGTGGTTGCTACTGGAGTGACAACTTGGTTGACTGACAAAGCTGGTCGACGACTCCTCCTCATTATCTCTACTACAGGGATGACCATTACTCTTGTTGTTGTTTCTGTGTCATTTTTTGTGAAGGACAACATAACTAATGGTTCTCATTTATACTCTGTAATGAGTATGCTTTCGCTGGTCGGGCT]

[+] EMBL AK068594             [CGCTCTTCCCCTCAATCAATCAAGCTTAAGCTAAGCTGGGCGCGACAGCGAGAGAGAAACGAGGGATCGATCGCGTCCACGCACGCCCGATCCCGGCCGCGAGATGAGCTTCCGCGGCGAGGAGAGCGGCGGCGAGGATGGGGGGCGGACGGCGTCGGCGTCGGACCTGCGGAAGCCGTTCCTCCACACGGGGAGCTGGTACAAGATGTCGTCGGCGGGCGGCGGCGGCGGGATGGGGTCGCGCCTCGGCTCCTCCGCCTACTCCCTCCGCGACTCCTCCGTCTCCGCCGTCCTCTGCACCCTCATCGTCGCCCTCGGCCCCATCCAGTTCGGCTTCACCTGCGGCCTCTCCTCGCCCACCCAGGACGCCATCATCTCCGACCTCGGCCTCACCCTCTCCGAGTTCTCGCTGTTCGGGTCGCTGTCGAACGTCGGGGCAATGGTGGGCGCCATCGCCAGCGGCCAGATCGCCGAGTACATCGGCCGCAAGGGGTCTCTCATGATCGCGGCAATTCCTAACATTATTGGGTGGCTCGCAATATC TTTTGCAAAGGACTCATCCTTTTTGTTTATGGGCCGA TTGCTGG AAGGA TTTGGGGTCGGCGTGATATCCTATGTGGTGCCAGTTTATATAGCAGAAATTGCTCCACAAACAATGAGAGGAGCTCTTGGTTCAGTCAATCAGCTTTCTGTTACTATTGGCATATTGCTTGCCTACTTGTTAGGCATGTTTGTTCCCTGGAGAATTCTCTCCGTTCTCGGTATTTTACCATGTTCAATTCTGATACCTGGATTGTTCTTTATCCCTGAATCACCAAGGTGGCTGGCAAAAATGGGAAAGATGGAGGATTTTGAATCCTCGCTGCAAGTATTGCGAGGATTTGAAACAGACATCGCTGTAGAAGTAAATGAAATAAAGAGAACAGTTCAATCATCACGGAGGAGGACGACAATACGATTTGCAGATATCAAGCAGAAGAGATATAGTGTACCTCTAATGATAGGAATTGGTCTCCTTGTACTGCAGCAGTTAAGTGGTGTGAATGGCATTCTATTTTATGCTGCTAGTATCTTCAAAGCCGCCGGTCTTACGAATAGTAATCTAGCAACATTTGGTCTGGGGGTTGTTCAGGTGGTTGCTACTGGAGTGACAACTTGGTTGACTGACAAAGCTGGTCGACGACTCCTCCTCATTATCTCTACTACAGGGATGACCATTACTCTTGTTGTTGTTTCTGTGTCATTTTTTGTGAAGGACAACATAACTAATGGTTCTCATTTATACTCTGTAATGAGTATGCTTTCGCTGGTCGGGCT]
[+] EMBL C72800               [                                                                GATCGATCGCGTCCACGCACGCCCGATCCCGGCCGCGAGATGAGCTTCCGCGGCGAGGAGAGCGGCGGCGAGGATGGGGGGCGGACGGCGTCGGCGTCGGACCTGCGGAAGCCGTTCCTCCACACGGGGAGCTGGTACAAGATGTCGTCGGCGGGCGGCGGCGGCGGGATGGGGTCGCGCCTCGGCTCCTCCGCCTACTCCCTCCGCGACTCCTCCGTCTCCGCCGTCCTCTGCACCCTCATCGTCGCCCTCGGCCCCATCCAGTTCGGCTTCACCTGCGGCTTCTCCTCGCCCACCCAGGACGCCATCATCTCCGACCTCGGCCTCAACCTCTCCGAGTTCTCGCTGTTCGGGTCGCTGTCGAACGTCGGGGCAATGGTGGGCGCAATCG CANCGGCaana                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU062620             [                                                                                                                                                                               CCGTTCCTCCACACGGGGAGCTGGTACAAGATGTCGTCGGCGGGNGGCGGCGGCGGGATGGGGTCGCGCCTCGGCTCCTCCGCCTACTCCCTCCGCNACTCCTCCGTCTCCGCCGTCCTCTGCACCCTCATCGTCGCCCTCGGCCCCATCCAGTTCGGCTTCACCTGCGGCTTCTCCTCGCCCACCCAGGACGCCATCATCTCCGACCTCGGCCTCACCCTCTCCGAGTTCTCGCTGTTCGGGTCGCTGTCGAACGTCGGGGCAATGGTGGGCGCCATCG CAGCGG CAGATCGCCGAGTACATCGGCCGCAAGGGGTCTCTCATGATCGCGGCAATTTCTAACATTATTGGGTGG TNGCAATATCTTTTTGCAAAGGACTCATCCTTTTTGTTTATGGGCCGATTTNTTGGAAAGGATTTTGGGGTCGGCGTGATATCCAATGTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB675064             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTGGTGCCAGTTTATATAGCAGAAATTGCTCCACAAACAATGAGAGGAGCTCTTGGTTCAGTCAATCAGCTTTCTGTTACTATTGGCATATTGCTTGCCTACTTGTTAGGCATGTTTGTTCCCTGGAGAATTCTCTCCGTTCTCGGTATTTTACCATGTTCAATTCTGATACCTGGATTGTTCTTTATCCCTGAATCACCAAGGTGGCTGGCAAAAATGGGAAAGATGAAGGATTTTGAATCCTCGCTGCAAGTATTGCGAGGATTTGAAACAGACATCGCTGTAGAAGTAAATGAAATAAAGAGAACAGTTCAATCATCACGGAGGAGGACGACAATACGATTTGCAGATATCAAGCAGAAGAGATATAGTGTACCTCTAATGATAGGAATTGGTCTCCTTGTACTGCAGCAGTTAAGTGGTGTGAATGGCATTCTATTTTATGCTGCTAGTATCTTCAAAGCCGCCGGTCTTACGAATAGTAATCTAGCAACATTTGGTCTGGGGGTTGTTCAGGTGGTTGCTACTGGAGTGACAACTTGGTTGACTGACAAAGCTGGTCGACGACTCCTCCTCATTATCTCTACTACAGGGATGACCATTACTCTTGTTGTTGTTTCTGTGTCATTTTTTGTGAAGGACAACATAACTAATGGTTCTCATTTATACTCTGTAATGAGTATGCTTTCGCTGGTCGGGCT]
[+] EMBL OSS14220A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATTTGCAGATATCAAGCAGAAGAGATATAGTGTACCTCTAATGATAGGAATTGGTCTCCTTGTACTGCAGCAGTTAAGTGGTGTGAATGGCATTCTATTTTATGCTGCTAGTATCTTCAAAGCCGCCGGTCTTACGAATAGTAATCTAGCAACATTTGGTCTGGGGGTTGTTCAGGTGGTTGCTACTGGAGTGACAACTTGGTTGACTGACAAAGCTGGTCGACGACTCCTCCTCATTATCTCTACTACAGGGATGACCATTACTCTTGTTGTTGTTTCTGTGTCATTTTTTGTGAAGGACAACATAACTAATGGTTCTCATTTATACTCTGTAATGAGTATGCTTTCGCTGG       ]




>consensus_8493#0
CGCTCTTCCCCTCAATCAATCAAGCTTAAGCTAAGCTGGGCGCGACAGCGAGAGAGAAAC
GAGGGATCGATCGCGTCCACGCACGCCCGATCCCGGCCGCGAGATGAGCTTCCGCGGCGA
GGAGAGCGGCGGCGAGGATGGGGGGCGGACGGCGTCGGCGTCGGACCTGCGGAAGCCGTT
CCTCCACACGGGGAGCTGGTACAAGATGTCGTCGGCGGGCGGCGGCGGCGGGATGGGGTC
GCGCCTCGGCTCCTCCGCCTACTCCCTCCGCGACTCCTCCGTCTCCGCCGTCCTCTGCAC
CCTCATCGTCGCCCTCGGCCCCATCCAGTTCGGCTTCACCTGCGGCTTCTCCTCGCCCAC
CCAGGACGCCATCATCTCCGACCTCGGCCTCACCCTCTCCGAGTTCTCGCTGTTCGGGTC
GCTGTCGAACGTCGGGGCAATGGTGGGCGCCATCGCAGCGGCCAGATCGCCGAGTACATC
GGCCGCAAGGGGTCTCTCATGATCGCGGCAATTCCTAACATTATTGGGTGGCTCGCAATA
TCTTTTGCAAAGGACTCATCCTTTTTGTTTATGGGCCGATTGCTGGAAGGATTTGGGGTC
GGCGTGATATCCTATGTGGTGCCAGTTTATATAGCAGAAATTGCTCCACAAACAATGAGA
GGAGCTCTTGGTTCAGTCAATCAGCTTTCTGTTACTATTGGCATATTGCTTGCCTACTTG
TTAGGCATGTTTGTTCCCTGGAGAATTCTCTCCGTTCTCGGTATTTTACCATGTTCAATT
CTGATACCTGGATTGTTCTTTATCCCTGAATCACCAAGGTGGCTGGCAAAAATGGGAAAG
ATGGAGGATTTTGAATCCTCGCTGCAAGTATTGCGAGGATTTGAAACAGACATCGCTGTA
GAAGTAAATGAAATAAAGAGAACAGTTCAATCATCACGGAGGAGGACGACAATACGATTT
GCAGATATCAAGCAGAAGAGATATAGTGTACCTCTAATGATAGGAATTGGTCTCCTTGTA
CTGCAGCAGTTAAGTGGTGTGAATGGCATTCTATTTTATGCTGCTAGTATCTTCAAAGCC
GCCGGTCTTACGAATAGTAATCTAGCAACATTTGGTCTGGGGGTTGTTCAGGTGGTTGCT
ACTGGAGTGACAACTTGGTTGACTGACAAAGCTGGTCGACGACTCCTCCTCATTATCTCT
ACTACAGGGATGACCATTACTCTTGTTGTTGTTTCTGTGTCATTTTTTGTGAAGGACAAC
ATAACTAATGGTTCTCATTTATACTCTGTAATGAGTATGCTTTCGCTGGTCGGGCT
clustalw multiple alignements is not computed in this case