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Oryza sativa
cluster # 8495 cluster # 8495       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8495#0 length = 2384 sequences # 4  
consensus_8495#1 length = 832 sequences # 1  

consensusID : consensus_8495#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2384
fasta sequence
                              [CGGCAAGCACACTGCAGCAGTGCAGCCGCCATGGCTCGCCCGTCGCAGCTCTACCTCCTCTCCTACAACTCCGTCCAGGCCCTCGGATGGTTCGTCGCCTTGCTCCGCCTGCTGCCCTGCCTCGCCCCTCCCTCATCCGTCCACTCGTCATACGCCGTCGCCGGCGACCTCGTATGCTTGCTGCAGACGTGGGCGATTCTTGAAACGATCCATGCCGCCATCGGATTGGTGCACACGTCGCAGCTTCTTGCCTTCTTGCAGTGGGGAGGGAGGACTCACTTCGTTCTCGCTGTGGTTCGGCAAATCCCCGAGGTGGGGAGGACTGCAAATTTCTGCTTCGTTTGGAACGGATGAATTTTGCGGGATTCTTGGAGGAATTGAACAAATTCATGTGAAAATCCCGTAGAATTTGTGTTTTTTATTTTGTCATGTGTAAATGGAAGAGCCAACCGCAAAAACGAATTTGCACTTCGACCTAGTGAAGAAGGGAATTTCTTCCTTATTATAAAATTTCCAATGATACATTTTCTGTTATTACCTTTTTACAGTAGTGCCTCTCAAGGTTTCAACTTAGGTTTACTAATTTAGTCTCCTGTGCCAAATGCAGGTTCAGAGTAGCCCTTCCGTGTTCATAACGTTCATGGCTTGGAGCATATCTGAGGTGTGGCACAAAATGATACTACATCATTTTCTCCTCTTTTTGTGGTTTGCCTTGTTCTCATAAAAACAATACTGATGCTTTTTGAGTACATTAAAAAATGATTTTCTATGATGCAATCTCATGATATAACGAGAAATTTCTGGTGGAACCTTCTCAGGATGCACATATTTTGTTTCTATTTTACTGCACAATGATCTATGCCAATGGAGCTAATATTATTTCACCTGTTTCATTCATATTAAAATGTCAATTACGTGTTGAAAGGGATGATCTGACAACTACGTTTAGCTGTTAAGAGGATAAGTTGAGCTGGTACTACTGCCTAAGGAAATGCTAGCATGAATAGAACTGTCTGTGCATGTACCAACTGAAATCCACGACAGACAAATATGTTTCCAAGTTCTATGACACGAAAATACCCTTTTACTAACCTCCGTGCATGTGAACGAAAAGCATTATTTAGGCATCTACATTTTGGTTTAACTCAATGGTACTCAGTACTTACCTTATTTTGAAATAATTCGCAAGACAATGCTATTTTTGTTCAGTCTTTTATCTGAAGTCTAATTTCTTCATGGTGCAGGTCATCAGATACTCACATTATGCTCTGACAACCTTAAAAGTTTGTCCACCATGGCTAACATATCTCAGGTTTGATTTGCAAATGAACTCCAGTTCCCACATCCAAGGATGCATCCACAGTATTTTCTTAGTAGCTTCTCTTAGGCTCGGTGCCCAGTACACCTCTTGTTTTCCACTATTTTCTGGTTGTTTTCTATTGTTTTTGGTAGAAAGTTACACAATTCTCCATTCTTCAAAAATATTTTTGGTCACAGGTCATTTTTATTTTCCGTTTAAAGACACCTTGCACTGAAACCAGCATAGGAAGCAGAAAGATGGACACAGTATCATGGTTGTTTTACCTTCTGTCTTCTAAAAGAAGTTGTAAAATTGCAAACTTGTTGTTCAAATTACAATAACCGTATTGAGTAAGCTACAGAAAGATCACTGAGCTGGAACTATTAACTGGGATATTAAAATGAATCACCATGCATGTCATTTTTATATCCAGGTTCATCTAATATTGTTCCTACTCCAAAATCGCCAGTACATCGCTGCTATGTTGATTTTGTTTCTTTACATGATATAATAATGGATCACAATGTTTAACTGCAGTACTACTGTTGCTTACCAGTCCCTAGTTTTACCGCGCTGCTTATGGTC-TTTTTTCCAGGTGACTGCTGTTCTCCTGATCAGAGACTAATTAACCCTTTCTACTTATTTGCACCATGTAGGTACACTGCCTTTATACCGCTGTATCCAATTGGAGTAGGCCCAGGAGAAATGTGGACTATGTACCAAGCTCTCCCATTTGTGAAGGAGAGGAAACTCTACTCTGGCTTCTTTGGGAAGTTCTCCATGAGCTACCATTCCTTCCTAGTGGCTGTGCTGGCAGTCTACCCGTTTCTGTGGATGAAGCTGTACCTGCATGTGTTCAAGCAGCGCAGGTCGAAGCTGGGGAAATCGGGAGGCGCCAAGAAACGAGCCTGAAGAAACCAGCTCCGTCTCGATGCTCATACATAGTAGTACATGATCCCTTTTTGAAATTTCTCTTTGTTTATTTATTTACGAGAAAGCATGTACTCATGATTCTGATTATAATGGCTAAAACATTAAGCGCG-TATGATAATGGTAAAGCTGCTTGGTTTTTTTAAAAAAAAAA]

[+] EMBL AK066350             [CGGCAAGCACACTGCAGCAGTGCAGCCGCCATGGCTCGCCCGTCGCAGCTCTACCTCCTCTCCTACAACTCCGTCCAGGCCCTCGGATGGTTCGTCGCCTTGCTCCGCCTGCTGCCCTGCCTCGCCCCTCCCTCATCCGTCCACTCGTCATACGCCGTCGCCGGCGACCTCGTATGCTTGCTGCAGACGTGGGCGATTCTTGAAACGATCCATGCCGCCATCGGATTGGTGCACACGTCGCAGCTTCTTGCCTTCTTGCAGTGGGGAGGGAGGACTCACTTCGTTCTCGCTGTGGTTCGGCAAATCCCCGAGGTGGGGAGGACTGCAAATTTCTGCTTCGTTTGGAACGGATGAATTTTGCGGGATTCTTGGAGGAATTGAACAAATTCATGTGAAAATCCCGTAGAATTTGTGTTTTTTATTTTGTCATGTGTAAATGGAAGAGCCAACCGCAAAAACGAATTTGCACTTCGACCTAGTGAAGAAGGGAATTTCTTCCTTATTATAAAATTTCCAATGATACATTTTCTGTTATTACCTTTTTACAGTAGTGCCTCTCAAGGTTTCAACTTAGGTTTACTAATTTAGTCTCCTGTGCCAAATGCAGGTTCAGAGTAGCCCTTCCGTGTTCATAACGTTCATGGCTTGGAGCATATCTGAGGTGTGGCACAAAATGATACTACATCATTTTCTCCTCTTTTTGTGGTTTGCCTTGTTCTCATAAAAACAATACTGATGCTTTTTGAGTACATTAAAAAATGATTTTCTATGATGCAATCTCATGATATAACGAGAAATTTCTGGTGGAACCTTCTCAGGATGCACATATTTTGTTTCTATTTTACTGCACAATGATCTATGCCAATGGAGCTAATATTATTTCACCTGTTTCATTCATATTAAAATGTCAATTACGTGTTGAAAGGGATGATCTGACAACTACGTTTAGCTGTTAAGAGGATAAGTTGAGCTGGTACTACTGCCTAAGGAAATGCTAGCATGAATAGAACTGTCTGTGCATGTACCAACTGAAATCCACGACAGACAAATATGTTTCCAAGTTCTATGACACGAAAATACCCTTTTACTAACCTCCGTGCATGTGAACGAAAAGCATTATTTAGGCATCTACATTTTGGTTTAACTCAATGGTACTCAGTACTTACCTTATTTTGAAATAATTCGCAAGACAATGCTATTTTTGTTCAGTCTTTTATCTGAAGTCTAATTTCTTCATGGTGCAGGTCATCAGATACTCACATTATGCTCTGACAACCTTAAAAGTTTGTCCACCATGGCTAACATATCTCAGGTTTGATTTGCAAATGAACTCCAGTTCCCACATCCAAGGATGCATCCACAGTATTTTCTTAGTAGCTTCTCTTAGGCTCGGTGCCCAGTACACCTCTTGTTTTCCACTATTTTCTGGTTGTTTTCTATTGTTTTTGGTAGAAAGTTACACAATTCTCCATTCTTCAAAAATATTTTTGGTCACAGGTCATTTTTATTTTCCGTTTAAAGACACCTTGCACTGAAACCAGCATAGGAAGCAGAAAGATGGACACAGTATCATGGTTGTTTTACCTTCTGTCTTCTAAAAGAAGTTGTAAAATTGCAAACTTGTTGTTCAAATTACAATAACCGTATTGAGTAAGCTACAGAAAGATCACTGAGCTGGAACTATTAACTGGGATATTAAAATGAATCACCATGCATGTCATTTTTATATCCAGGTTCATCTAATATTGTTCCTACTCCAAAATCGCCAGTACATCGCTGCTATGTTGATTTTGTTTCTTTACATGATATAATAATGGATCACAATGTTTAACTGCAGTACTACTGTTGCTTACCAGTCCCTAGTTTTACCGCGCTGCTTATGGTC TTTTTTCCAGGTGACTGCTGTTCTCCTGATCAGAGACTAATTAACCCTTTCTACTTATTTGCACCATGTAGGTACACTGCCTTTATACCGCTGTATCCAATTGGAGTAGGCCCAGGAGAAATGTGGACTATGTACCAAGCTCTCCCATTTGTGAAGGAGAGGAAACTCTACTCTGGCTTCTTTGGGAAGTTCTCCATGAGCTACCATTCCTTCCTAGTGGCTGTGCTGGCAGTCTACCCGTTTCTGTGGATGAAGCTGTACCTGCATGTGTTCAAGCAGCGCAGGTCGAAGCTGGGGAAATCGGGAGGCGCCAAGAAACGAGCCTGAAGAAACCAGCTCCGTCTCGATGCTCATACATAGTAGTACATGATCCCTTTTTGAAATTTCTCTTTGTTTATTTATTTACGAGAAAGCATGTACTCATGATTCTGATTATAATGGCTAAAAC                                                    ]
[+] EMBL CB675583             [                                                                                                                                                                             agGCTTGCTGCAGACGTGGGCGATTCTTGAAACGATCCATGCCGCCATCGGATTGGTGCACACGTCGCCGCTTCTTGCCTTCTTGCAGTGGGGAGGGAGGACTCACTTCGTTCTCGCTGTGGTTCGGCAAATCCCCGAGGTGGGGAGGACTGCAAATTTCTGCTTCGTTTGGAACGGATGAATTTTGCGGGATTCTTGGAGGAATTGAACAAATTCATGTGAAAATCCCGTAGAATTTGTGTTTTTTATTTTGTCATGTGTAAATGGAAGAGCCAACCGCAAAAACGAATTTGCACTTCGACCTAGTGAAGAAGGAAATTTCTTCCTTATTATAAAATTTCCAATGATACATTTTCTGTTATTACCTTTTTACAGTAGTGCCTCTCAAGGTTTCAACTTAGGTTTACTAATTTAGTCTCCTGTGCCAAATGCAGGTTCAGAGTAGCCCTTCCGTGTTCATAACGTTCATGGCTTGGAGCATATCTGAGGTGTGGCACAAAATGATACTACATCATTTTCTCCTCTTTTTGTGGTTTGCCTTGTTCTCATAAAAACAATACTGATGCTTTTTGAGTACATTAAAAAATGATTTTCTATGATGCAATCTCATGATATAACGAGAAATTTCTGGTGGAACCTTCTCAGGATGCACATATTTTGTTTCTATTTTACTGCACAATGATCTATGCCAATGGAGCTAATATTATTTCACCTGTTTCATTCATATTAAAATGTCAATTACGTGTTGAAAGGGATGATCTGANCACTACGTTTAGCTGTTAAGAGGATAAGTTGAGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB675584             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAGGAAGCAGAAAGATGGACACAGTATCATGGTTGTTTTACCTTCTGTCTTCTAAAAGAAGTTGTAAAATTGCAAACTTGTTGTTCAAATTACAATAACCGTATTGAGTAAGCTACAGAAAGATCACTGAGCTGGAACTATTAACTGGGATATTAAAATGAATCACCATGCATGTCATTTTTATATCCAGGTTCATCTAATATTGTTCCTACTCCAAAATCGCCAGTACATCGCTGCTATGTTGATTTTGTTTCTTTACATGATATAATAATGGATCACAATGTTTAACTGCAGTACTACTGTTGCTTACCAGTCCCTAGTTTTACCGCGCTGCTTATGGTC TTTTTTCCAGGTGACTGCTGTTCTCCTGATCAGAGACTAATTAACCCTTTCTACTTATTTGCACCATGTAGGTACACTGCCTTTATACCGCTGTATCCAATTGGAGTAGGCCCAGGAGAAATGTGGACTATGTACCAAGCTCTCCCATTTGTGAAGGAGAGGAAACTCTACTCTGGCTTCTTTGGGAAGTTCTCCATGAGCTACCATTCCTTCCTAGTGGCTGTGCTGGCAGTCTACCCGTTTCTGTGGATGAAGCTGTACCTGCATGTGTTCAAGCAGCGCAGGTCGAAGCTGGGGAAATCGGGAGGCGCCAAGAAACGAGCCTGAAGAAACCAGCTCCGTCTCGATGCTCATACATAGTAGTACATGATCCCTTTTTGAAATTTCTCTTTGTTTATTTATTTACGAGAAAGCATGTACTCATGATTCTGATTATAATGGCTAAAACATTAAGCGCG                                          ]
[+] EMBL BI813410             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAGT CCTAG TTTACCGCGCTGCTTATGGTCTTTTTTTCCAGGTGACTGCTGTTCTCCTGATCAGAGACTAATTAACCCTTTCTACTTATTTGCACCATGTAGGTACACTGCCTTTATACCGCTGTATCCAATTGGAGTAGGCCCAGGAGAAATGTGGACTATGTACCAAGCTCTCCCATTTGTGAAGGAGAGGAAACTCTACTCTGGCTTCTTTGGGAAGTTCTCCATGAGCTACCATTCCTTCCTAGTGGCTGTGCTGGCAGTCTACCCGTTTCTGTGGATGAAGCTGTACCTGCATGTGTTCAAGCAGCGCAGGTCGAAGCTGGGGAAAACGGGAGGCGCCAAGAAACGAGCCTGAAGAAACCAGCTCCGTCTCGATGCTCATACATAGTAGTACATGATCCCTTTTTGAAATTTCTCTTTGTTTATTTATTTACGAGAAAGCATGTACTCATGATTCTGATTGTAATGGCTAAAAC TTAAGCGCGATATGATAATGGTAAAGCTGCTTGGTTTTTTTAAAAAAAAAA]


>consensus_8495#0 CGGCAAGCACACTGCAGCAGTGCAGCCGCCATGGCTCGCCCGTCGCAGCTCTACCTCCTC TCCTACAACTCCGTCCAGGCCCTCGGATGGTTCGTCGCCTTGCTCCGCCTGCTGCCCTGC CTCGCCCCTCCCTCATCCGTCCACTCGTCATACGCCGTCGCCGGCGACCTCGTATGCTTG CTGCAGACGTGGGCGATTCTTGAAACGATCCATGCCGCCATCGGATTGGTGCACACGTCG CAGCTTCTTGCCTTCTTGCAGTGGGGAGGGAGGACTCACTTCGTTCTCGCTGTGGTTCGG CAAATCCCCGAGGTGGGGAGGACTGCAAATTTCTGCTTCGTTTGGAACGGATGAATTTTG CGGGATTCTTGGAGGAATTGAACAAATTCATGTGAAAATCCCGTAGAATTTGTGTTTTTT ATTTTGTCATGTGTAAATGGAAGAGCCAACCGCAAAAACGAATTTGCACTTCGACCTAGT GAAGAAGGGAATTTCTTCCTTATTATAAAATTTCCAATGATACATTTTCTGTTATTACCT TTTTACAGTAGTGCCTCTCAAGGTTTCAACTTAGGTTTACTAATTTAGTCTCCTGTGCCA AATGCAGGTTCAGAGTAGCCCTTCCGTGTTCATAACGTTCATGGCTTGGAGCATATCTGA GGTGTGGCACAAAATGATACTACATCATTTTCTCCTCTTTTTGTGGTTTGCCTTGTTCTC ATAAAAACAATACTGATGCTTTTTGAGTACATTAAAAAATGATTTTCTATGATGCAATCT CATGATATAACGAGAAATTTCTGGTGGAACCTTCTCAGGATGCACATATTTTGTTTCTAT TTTACTGCACAATGATCTATGCCAATGGAGCTAATATTATTTCACCTGTTTCATTCATAT TAAAATGTCAATTACGTGTTGAAAGGGATGATCTGACAACTACGTTTAGCTGTTAAGAGG ATAAGTTGAGCTGGTACTACTGCCTAAGGAAATGCTAGCATGAATAGAACTGTCTGTGCA TGTACCAACTGAAATCCACGACAGACAAATATGTTTCCAAGTTCTATGACACGAAAATAC CCTTTTACTAACCTCCGTGCATGTGAACGAAAAGCATTATTTAGGCATCTACATTTTGGT TTAACTCAATGGTACTCAGTACTTACCTTATTTTGAAATAATTCGCAAGACAATGCTATT TTTGTTCAGTCTTTTATCTGAAGTCTAATTTCTTCATGGTGCAGGTCATCAGATACTCAC ATTATGCTCTGACAACCTTAAAAGTTTGTCCACCATGGCTAACATATCTCAGGTTTGATT TGCAAATGAACTCCAGTTCCCACATCCAAGGATGCATCCACAGTATTTTCTTAGTAGCTT CTCTTAGGCTCGGTGCCCAGTACACCTCTTGTTTTCCACTATTTTCTGGTTGTTTTCTAT TGTTTTTGGTAGAAAGTTACACAATTCTCCATTCTTCAAAAATATTTTTGGTCACAGGTC ATTTTTATTTTCCGTTTAAAGACACCTTGCACTGAAACCAGCATAGGAAGCAGAAAGATG GACACAGTATCATGGTTGTTTTACCTTCTGTCTTCTAAAAGAAGTTGTAAAATTGCAAAC TTGTTGTTCAAATTACAATAACCGTATTGAGTAAGCTACAGAAAGATCACTGAGCTGGAA CTATTAACTGGGATATTAAAATGAATCACCATGCATGTCATTTTTATATCCAGGTTCATC TAATATTGTTCCTACTCCAAAATCGCCAGTACATCGCTGCTATGTTGATTTTGTTTCTTT ACATGATATAATAATGGATCACAATGTTTAACTGCAGTACTACTGTTGCTTACCAGTCCC TAGTTTTACCGCGCTGCTTATGGTCTTTTTTCCAGGTGACTGCTGTTCTCCTGATCAGAG ACTAATTAACCCTTTCTACTTATTTGCACCATGTAGGTACACTGCCTTTATACCGCTGTA TCCAATTGGAGTAGGCCCAGGAGAAATGTGGACTATGTACCAAGCTCTCCCATTTGTGAA GGAGAGGAAACTCTACTCTGGCTTCTTTGGGAAGTTCTCCATGAGCTACCATTCCTTCCT AGTGGCTGTGCTGGCAGTCTACCCGTTTCTGTGGATGAAGCTGTACCTGCATGTGTTCAA GCAGCGCAGGTCGAAGCTGGGGAAATCGGGAGGCGCCAAGAAACGAGCCTGAAGAAACCA GCTCCGTCTCGATGCTCATACATAGTAGTACATGATCCCTTTTTGAAATTTCTCTTTGTT TATTTATTTACGAGAAAGCATGTACTCATGATTCTGATTATAATGGCTAAAACATTAAGC GCGTATGATAATGGTAAAGCTGCTTGGTTTTTTTAAAAAAAAAA



consensusID : consensus_8495#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 832
fasta sequence
                              [AAATCCCATTGCCAGTAGCCACGGCAAGCACACTGCAGCAGTGCAGCCGCCATGGCTCGCCCGTCGCAGCTCTACCTCCTCTCCTACAACTCCGTCCAGGCCCTCGGATGGTTCGTCGCCTTGCTCCGCCTGCTGCCCTGCCTCGCCCCTCCCTCCTCCGTCCACTCGTCATACGCCGTCGCCGGCGACCTCGTATGCTTGCTGCAGACGTGGGCGATTCTTGAAACGATCCATGCCGCCATCGGATTGGTGCACACGTCGCCGCTTCTTGCCTTCTTGCAGTGGGGAGGGAGGACTCACTTCGTTCTCGCTGTGGTTCGGCAAATCCCCGAGGTTCAGAGTAGCCCTTCCGTGTTCATAACGTTCATGGCTTGGAGCATATCTGAGGTCATCAGATACTCACATTATGCTCTGACAACCTTAAAAGTTTGTCCACCATGGCTAACATATCTCAGGTACACTGCCTTTATACCGCTGTATCCAATTGGAGTAGGCCCAGGAGAAATGTGGACTATGTACCAAGCTCTCCCATTTGTGAAGGAGAGGAAACTCTACTCTGGCTTCTTTGGGAAGTTCTCCATGAGCTACCATTCCTTCCTAGTGGCTGTGCTGGCAGTCTACCCGTTTCTGTGGATGAAGCTGTACCTGCATGTGTTCAAGCAGCGCAGGTCGAAGCTGGGGAAATCGGGAGGCGCCACGAAACGAGCCTGAAGAAACCAGCTCCGTCTCGATGCTCATACATAGTAGTACATGATCCCTTTTTGAAATTTCTCTTTGTTTATTTATTTACGAGAAAGCATGTACTCATGATTCTGATTATAATGGCTAAAAC]

[+] EMBL AK058842             [AAATCCCATTGCCAGTAGCCACGGCAAGCACACTGCAGCAGTGCAGCCGCCATGGCTCGCCCGTCGCAGCTCTACCTCCTCTCCTACAACTCCGTCCAGGCCCTCGGATGGTTCGTCGCCTTGCTCCGCCTGCTGCCCTGCCTCGCCCCTCCCTCCTCCGTCCACTCGTCATACGCCGTCGCCGGCGACCTCGTATGCTTGCTGCAGACGTGGGCGATTCTTGAAACGATCCATGCCGCCATCGGATTGGTGCACACGTCGCCGCTTCTTGCCTTCTTGCAGTGGGGAGGGAGGACTCACTTCGTTCTCGCTGTGGTTCGGCAAATCCCCGAGGTTCAGAGTAGCCCTTCCGTGTTCATAACGTTCATGGCTTGGAGCATATCTGAGGTCATCAGATACTCACATTATGCTCTGACAACCTTAAAAGTTTGTCCACCATGGCTAACATATCTCAGGTACACTGCCTTTATACCGCTGTATCCAATTGGAGTAGGCCCAGGAGAAATGTGGACTATGTACCAAGCTCTCCCATTTGTGAAGGAGAGGAAACTCTACTCTGGCTTCTTTGGGAAGTTCTCCATGAGCTACCATTCCTTCCTAGTGGCTGTGCTGGCAGTCTACCCGTTTCTGTGGATGAAGCTGTACCTGCATGTGTTCAAGCAGCGCAGGTCGAAGCTGGGGAAATCGGGAGGCGCCACGAAACGAGCCTGAAGAAACCAGCTCCGTCTCGATGCTCATACATAGTAGTACATGATCCCTTTTTGAAATTTCTCTTTGTTTATTTATTTACGAGAAAGCATGTACTCATGATTCTGATTATAATGGCTAAAAC]


>consensus_8495#1 AAATCCCATTGCCAGTAGCCACGGCAAGCACACTGCAGCAGTGCAGCCGCCATGGCTCGC CCGTCGCAGCTCTACCTCCTCTCCTACAACTCCGTCCAGGCCCTCGGATGGTTCGTCGCC TTGCTCCGCCTGCTGCCCTGCCTCGCCCCTCCCTCCTCCGTCCACTCGTCATACGCCGTC GCCGGCGACCTCGTATGCTTGCTGCAGACGTGGGCGATTCTTGAAACGATCCATGCCGCC ATCGGATTGGTGCACACGTCGCCGCTTCTTGCCTTCTTGCAGTGGGGAGGGAGGACTCAC TTCGTTCTCGCTGTGGTTCGGCAAATCCCCGAGGTTCAGAGTAGCCCTTCCGTGTTCATA ACGTTCATGGCTTGGAGCATATCTGAGGTCATCAGATACTCACATTATGCTCTGACAACC TTAAAAGTTTGTCCACCATGGCTAACATATCTCAGGTACACTGCCTTTATACCGCTGTAT CCAATTGGAGTAGGCCCAGGAGAAATGTGGACTATGTACCAAGCTCTCCCATTTGTGAAG GAGAGGAAACTCTACTCTGGCTTCTTTGGGAAGTTCTCCATGAGCTACCATTCCTTCCTA GTGGCTGTGCTGGCAGTCTACCCGTTTCTGTGGATGAAGCTGTACCTGCATGTGTTCAAG CAGCGCAGGTCGAAGCTGGGGAAATCGGGAGGCGCCACGAAACGAGCCTGAAGAAACCAG CTCCGTCTCGATGCTCATACATAGTAGTACATGATCCCTTTTTGAAATTTCTCTTTGTTT ATTTATTTACGAGAAAGCATGTACTCATGATTCTGATTATAATGGCTAAAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8495#0      CGGCAAGCACACTGCAGCAGTGCAGCCGCCATGGCTCGCCCGTCGCAGCTCTACCTCCTC 60
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      TCCTACAACTCCGTCCAGGCCCTCGGATGGTTCGTCGCCTTGCTCCGCCTGCTGCCCTGC 120
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      CTCGCCCCTCCCTCATCCGTCCACTCGTCATACGCCGTCGCCGGCGACCTCGTATGCTTG 180
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      CTGCAGACGTGGGCGATTCTTGAAACGATCCATGCCGCCATCGGATTGGTGCACACGTCG 240
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      CAGCTTCTTGCCTTCTTGCAGTGGGGAGGGAGGACTCACTTCGTTCTCGCTGTGGTTCGG 300
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      CAAATCCCCGAGGTGGGGAGGACTGCAAATTTCTGCTTCGTTTGGAACGGATGAATTTTG 360
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      CGGGATTCTTGGAGGAATTGAACAAATTCATGTGAAAATCCCGTAGAATTTGTGTTTTTT 420
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      ATTTTGTCATGTGTAAATGGAAGAGCCAACCGCAAAAACGAATTTGCACTTCGACCTAGT 480
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      GAAGAAGGGAATTTCTTCCTTATTATAAAATTTCCAATGATACATTTTCTGTTATTACCT 540
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      TTTTACAGTAGTGCCTCTCAAGGTTTCAACTTAGGTTTACTAATTTAGTCTCCTGTGCCA 600
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      AATGCAGGTTCAGAGTAGCCCTTCCGTGTTCATAACGTTCATGGCTTGGAGCATATCTGA 660
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      GGTGTGGCACAAAATGATACTACATCATTTTCTCCTCTTTTTGTGGTTTGCCTTGTTCTC 720
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      ATAAAAACAATACTGATGCTTTTTGAGTACATTAAAAAATGATTTTCTATGATGCAATCT 780
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      CATGATATAACGAGAAATTTCTGGTGGAACCTTCTCAGGATGCACATATTTTGTTTCTAT 840
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      TTTACTGCACAATGATCTATGCCAATGGAGCTAATATTATTTCACCTGTTTCATTCATAT 900
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      TAAAATGTCAATTACGTGTTGAAAGGGATGATCTGACAACTACGTTTAGCTGTTAAGAGG 960
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      ATAAGTTGAGCTGGTACTACTGCCTAAGGAAATGCTAGCATGAATAGAACTGTCTGTGCA 1020
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      TGTACCAACTGAAATCCACGACAGACAAATATGTTTCCAAGTTCTATGACACGAAAATAC 1080
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      CCTTTTACTAACCTCCGTGCATGTGAACGAAAAGCATTATTTAGGCATCTACATTTTGGT 1140
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      TTAACTCAATGGTACTCAGTACTTACCTTATTTTGAAATAATTCGCAAGACAATGCTATT 1200
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      TTTGTTCAGTCTTTTATCTGAAGTCTAATTTCTTCATGGTGCAGGTCATCAGATACTCAC 1260
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      ATTATGCTCTGACAACCTTAAAAGTTTGTCCACCATGGCTAACATATCTCAGGTTTGATT 1320
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      TGCAAATGAACTCCAGTTCCCACATCCAAGGATGCATCCACAGTATTTTCTTAGTAGCTT 1380
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      CTCTTAGGCTCGGTGCCCAGTACACCTCTTGTTTTCCACTATTTTCTGGTTGTTTTCTAT 1440
consensus_8495#1      ------------------------------------------------------------
                                                                                  

consensus_8495#0      TGTTTTTGGTAGAAAGTTACACAATTCTCCATTCTTCAAAAATATTTTTGGTCACAGGTC 1500
consensus_8495#1      -----------------------------------------------------AAATCCC 7
                                                                           * *   *

consensus_8495#0      ATTTTTATTTTCCGTTTAAAG-ACACCTT-GCACTGAAACCAGCATAGGAAGCAGAAAGA 1558
consensus_8495#1      ATTGCCAGTAGCCACGGCAAGCACACTGCAGCAGTGCAGCCGCCATGGCTCGCCCGTCG- 66
                      ***   * *  **     *** ****    *** ** * **  *** *   **     * 

consensus_8495#0      TGGACACAGTATCATGGTTGTTTTACCTTCTGTCTTCTAAAAGAAGTTGTAAAATTGCAA 1618
consensus_8495#1      CAGCTCTACCTCCTCTCCTACAACTCCGTCCAGGCCCTCGGATGGTTCGTCGCCTTGCTC 126
                        *    *    *     *      ** **      **   *    * **    ****  

consensus_8495#0      -ACTTGTTGTTCAAATTACAATAACCGTATTGAGTAAGCTACAGAAAGATCACTGAGCTG 1677
consensus_8495#1      CGCCTGCTGCCCTGCCTCGCCCCTCCCTCCTCCGTCCACTCGTCATACGCCGTCGCCGGC 186
                        * ** **  *    *       ** *  *  **   **    * *   *   *     

consensus_8495#0      GAACTATTAACTGGGATATTAAAATGAATCACCATGCATGTCATTTTTATATCCA--GGT 1735
consensus_8495#1      GACCTCGTATGCTTGCTGCAGACGTGGGCGATTCTTGAAACGATCCATGCCGCCATCGGA 246
                      ** **  **     * *    *  **    *   *  *    **   *    ***  ** 

consensus_8495#0      TCATCTAATATTGTTCCTACTCCAAAATCGCCAGTACATCGCTGCTATGTTGATTTTGTT 1795
consensus_8495#1      TTGGTGCACAC-GTCGCCGCTTC----TTGCCTTCTTGCAGTGGGGAGGGAGGACTCACT 301
                      *      * *  **  *  ** *    * ***        *  *  * *  *   *   *

consensus_8495#0      TC-TTTACATGATATAATAATGGATCACAATGTTTAACTGCAGTACTACTGTTGCTTACC 1854
consensus_8495#1      TCGTTCTCGCTGTGGTTCGGCAAATCCCCGAGGTTCAGAGTAGCCCTTCCGT-GTTCATA 360
                      ** **  *    *          *** *   * ** *  * **  ** * ** * * *  

consensus_8495#0      AGTCCCTAGTTTTACCGCGCTGCTTATGGTCTTTTTTCCAGGTGACTGCTGTTCTCCTGA 1914
consensus_8495#1      ACGTTCATGGCTTGGAGCA-TATCTGAGGTCAT-----CAGAT-ACTCACATTATGCTC- 412
                      *    *  *  **   **  *   *  **** *     *** * ***    ** * **  

consensus_8495#0      TCAGAGACTAATTAACCCTTTCTACTTATTTGCACCATGT-AGGTACACTGCCTTTATAC 1973
consensus_8495#1      TGACAACCTTAAAAGTTTGTCCACCATGGCTAACATATCTCAGGTACACTGCCTTTATAC 472
                      * * *  ** *  *     * *  * *   *     ** * *******************

consensus_8495#0      CGCTGTATCCAATTGGAGTAGGCCCAGGAGAAATGTGGACTATGTACCAAGCTCTCCCAT 2033
consensus_8495#1      CGCTGTATCCAATTGGAGTAGGCCCAGGAGAAATGTGGACTATGTACCAAGCTCTCCCAT 532
                      ************************************************************

consensus_8495#0      TTGTGAAGGAGAGGAAACTCTACTCTGGCTTCTTTGGGAAGTTCTCCATGAGCTACCATT 2093
consensus_8495#1      TTGTGAAGGAGAGGAAACTCTACTCTGGCTTCTTTGGGAAGTTCTCCATGAGCTACCATT 592
                      ************************************************************

consensus_8495#0      CCTTCCTAGTGGCTGTGCTGGCAGTCTACCCGTTTCTGTGGATGAAGCTGTACCTGCATG 2153
consensus_8495#1      CCTTCCTAGTGGCTGTGCTGGCAGTCTACCCGTTTCTGTGGATGAAGCTGTACCTGCATG 652
                      ************************************************************

consensus_8495#0      TGTTCAAGCAGCGCAGGTCGAAGCTGGGGAAATCGGGAGGCGCCAAGAAACGAGCCTGAA 2213
consensus_8495#1      TGTTCAAGCAGCGCAGGTCGAAGCTGGGGAAATCGGGAGGCGCCACGAAACGAGCCTGAA 712
                      ********************************************* **************

consensus_8495#0      GAAACCAGCTCCGTCTCGATGCTCATACATAGTAGTACATGATCCCTTTTTGAAATTTCT 2273
consensus_8495#1      GAAACCAGCTCCGTCTCGATGCTCATACATAGTAGTACATGATCCCTTTTTGAAATTTCT 772
                      ************************************************************

consensus_8495#0      CTTTGTTTATTTATTTACGAGAAAGCATGTACTCATGATTCTGATTATAATGGCTAAAAC 2333
consensus_8495#1      CTTTGTTTATTTATTTACGAGAAAGCATGTACTCATGATTCTGATTATAATGGCTAAAAC 832
                      ************************************************************

consensus_8495#0      ATTAAGCGCGTATGATAATGGTAAAGCTGCTTGGTTTTTTTAAAAAAAAAA 2384
consensus_8495#1      ---------------------------------------------------
                                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)