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Oryza sativa
cluster # 8504 cluster # 8504       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8504#0 length = 1772 sequences # 5  

consensusID : consensus_8504#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1772
fasta sequence
                              [ACCTCCCGTACGTCAATGCCCGTGGCCGCCATTGATGGGGAAGAAGGCCGGCACCACCTCCTCCTGGCTCACCGCCGTCAAGCGCGCCTTCCGCTCCCCCTCTAAGGACGACTCCCCCAACAAGGCCGCCCGCCTCCGCGACGACACCGACGACGACAAGGGCAAGAGGGAGCGCCGCAGATGGCTCTTCAGGAAGTCCTCGTCGCCGTCTCCCGCGCCTCCGACACCGCCGCCGCCACAGCAGCAGCAGCAGCAATCGAGGGCGGCGGCCGTGACGGAGGAGCAGCGGCACGCCATCGCGCTCGCCGTGGCGACGGCGGCGACCGCGGAGGCGGCGGTGGCGACGGCGCAGGCGGCGGCGGAGGTGGTCCGGCTGACGCGTCCGAGCTCCAGCTTCGTCCGCG-AGCACTACGCCGCCATCGTGGTCCAGACCGCGTTCCGCGGGTNCCTGGCGCGGCGCGCGCTCCGGGCGCTCAAGGGGCTCGTGAAGCTGCAGGCGCTGGTGCGCGGCCACAACGTGCGGAAGCAGGCCAACATGACGCTCCGC-TGCATGCAGGCGCTGG-TGCGCGTCCAGGCCCGCGTCCGCG-ACCAGCGGATGCGCCTCTCCCAGGACTCCATCTCCTTGTCCGCCG-CCGCCGCCTCCGCCGCGCCATGCGGCAGCAGCAAGTCCTCCTACAGCGTCGACACCTCCACC-TTCTGGGATTCCAAGTACACCCACGACTTCG-CCGC-TGCCGACCGCCGCTCCATCGAGCGGTCGCGAGACGGCAGCAGCTTCGCCGCCGGCGACGACTGGGACGACCGGCCGCGGACGATAGAGGAGATCCAGGCGATGCTGCAGACGAGGAAGGACGCCGCGCTCAAGCGTGAGAGGGCGCTCTCCTACGCCTTCTCCCATCAAATTTGGAGGAACCCGGCGCCGTCGGTGGAGGAGATGGACGTCGATGGGCAGCCGAGGTGGGCGGAGAGGTGGATGGCGTCGCGCGCGTCGTTCGACACCAGCAGGAGCACCGTCCGCGCCTCCGCAGCGGCGGCGCCTGGGCGCGCGTCCACCGACCACCGCGACCAGGTCAAGACGCTGGAGATCGACACCGCGCGGCCCTTCTCCTACTCCACGCCACGCCGGCACGGCAACGCGTCGTACCACGCGTCGTCGTCGCCGATGCACCGCGCGCACCACCACTCGCCGGTCACGCCGTCGCCATCCAAGGCGCGGCCGCCGATCCAGGTGCGGTCGGCAAGCCCGCGCGTGGAGCGCGGCGGCGGCGGGGGAGGGAGCTACACCCCGAGCCTTCACTCGCACCGCCACCACGCGTCGTCGGGCGGCGCGGCGGCGGTGCCGGACTACATGGCGGCGACGGAGTCCGCCAAGGCGCGGGTGCGTTCCCAGAGCGCGCCGCGGCAGCGCCCGGCGACGCCGGAGCGCGACAGGATGTCATTCGGCGGCGGCGGCGGCGGCGGCGGAGCGAAGAAGCGGCTGTCGTTCCCCGTCCCCATCGACCCGTACCGCGCGTACGCGCAG-AGCCTGCGGAGCCCGAGCTTCAAGAGCGCGGCGGGGAGGTTCTCGTCGGAGCAGCGGTCGAACGTGTCGTCGTCCTGCGCGGAGAGCCTCGGCGGGGACGTGGTCTCTCCGTCATCCACCACCGACCT-CCGCCGCTGGCTTCGTT-AA-TCC-CCGCCGGCGTCGGCGAGGTGTTCGATGTAATGCCCGTGAGGTGTTCGCTGTAATGTTTTTTTTTTTACCACGACCTCGTAATTCATCCAAAAAAAAAAAAAAA]

[+] EMBL AK100461             [ACCTCCCGTACGTCAATGCCCGTGGCCGCCATTGATGGGGAAGAAGGCCGGCACCACCTCCTCCTGGCTCACCGCCGTCAAGCGCGCCTTCCGCTCCCCCTCTAAGGACGACTCCCCCAACAAGGCCGCCCGCCTCCGCGACGACACCGACGACGACAAGGGCAAGAGGGAGCGCCGCAGATGGCTCTTCAGGAAGTCCTCGTCGCCGTCTCCCGCGCCTCCGACACCGCCGCCGCCACAGCAGCAGCAGCAGCAATCGAGGGCGGCGGCCGTGACGGAGGAGCAGCGGCACGCCATCGCGCTCGCCGTGGCGACGGCGGCGACCGCGGAGGCGGCGGTGGCGACGGCGCAGGCGGCGGCGGAGGTGGTCCGGCTGACGCGTCCGAGCTCCAGCTTCGTCCGCG AGCACTACGCCGCCATCGTGGTCCAGACCGCGTTCCGCGGGTACCTGGCGCGGCGCGCGCTCCGGGCGCTCAAGGGGCTCGTGAAGCTGCAGGCGCTGGTGCGCGGCCACAACGTGCGGAAGCAGGCCAACATGACGCTCCGC TGCATGCAGGCGCTGG TGCGCGTCCAGGCCCGCGTCCGCG ACCAGCGGATGCGCCTCTCCCAGGACTCCATCTCCTTGTCCGCCG CCGCCGCCTCCGCCGCGCCATGCGGCAGCAGCAAGTCCTCCTACAGCGTCGACACCTCCACC TTCTGGGATTCCAAGTACACCCACGACTTCG CCGC TGCCGACCGCCGCTCCATCGAGCGGTCGCGAGACGGCAGCAGCTTCGCCGCCGGCGACGACTGGGACGACCGGCCGCGGACGATAGAGGAGATCCAGGCGATGCTGCAGACGAGGAAGGACGCCGCGCTCAAGCGTGAGAGGGCGCTCTCCTACGCCTTCTCCCATCAAATTTGGAGGAACCCGGCGCCGTCGGTGGAGGAGATGGACGTCGATGGGCAGCCGAGGTGGGCGGAGAGGTGGATGGCGTCGCGCGCGTCGTTCGACACCAGCAGGAGCACCGTCCGCGCCTCCGCAGCGGCGGCGCCTGGGCGCGCGTCCACCGACCACCGCGACCAGGTCAAGACGCTGGAGATCGACACCGCGCGGCCCTTCTCCTACTCCACGCCACGCCGGCACGGCAACGCGTCGTACCACGCGTCGTCGTCGCCGATGCACCGCGCGCACCACCACTCGCCGGTCACGCCGTCGCCATCCAAGGCGCGGCCGCCGATCCAGGTGCGGTCGGCAAGCCCGCGCGTGGAGCGCGGCGGCGGCGGGGGAGGGAGCTACACCCCGAGCCTTCACTCGCACCGCCACCACGCGTCGTCGGGCGGCGCGGCGGCGGTGCCGGACTACATGGCGGCGACGGAGTCCGCCAAGGCGCGGGTGCGTTCCCAGAGCGCGCCGCGGCAGCGCCCGGCGACGCCGGAGCGCGACAGGATGTCATTCGGCGGCGGCGGCGGCGGCGGCGGAGCGAAGAAGCGGCTGTCGTTCCCCGTCCCCATCGACCCGTACGGCGCGTACGCGCAG AGCCTGCGGAGCCCGAGCTTCAAGAGCGCGGCGGGGAGGTTCTCGTCGGAGCAGCGGTCGAACGTGTCGTCGTCCTGCGCGGAGAGCCTCGGCGGGGACGTGGTCTCTCCGTCATCCACCACCGACCT CCGCCGCTGGCTTCGTT AA TCCGCCGCCGGCGTCGGCGAGGTGTTCGATGTAATGCCCGTGAGGTGTTCGCTGTAATGTTTTTTTTTTTACCACGACCTCG                         ]
[+] EMBL AF074747             [                                                          TCCTCCTGGCTCACCGCCGTCAAGCGCGCCTTCCGCTCCCCCTCTAAGGACGACTCCCCCAACAAGGCCGCCCGCCTCCGCGACGACACCGACGACGACAAGGGCAAGAGGGAGCGCCGCAGATGGCTCTTCAGGAAGTCCTCGTCGCCGTCTCCCGCGCCTCCGACACCGCCGCCGCCACAGCAGCAGCAGCAGCAATCGAGGGCGGCGGCCGTGACGGAGGAGCAGCGGCACGCCATCGCGCTCGCCGTGGCGACGGCGGCGACCGCGGAGGCGGCGGTGGCGACGGCGCAGGCGGCGGCGGAGGTGGTCCGGCTGACGCGTCCGAGCTCCAGCTTCGTCCGCG AGCACTACGCCGCCATCGTGGTCCAGACCGCGTTCCGCGGGTNCCTGGCGCGGCGCGCGCTCCGGGCGCTCAAGGGGCTCGTGAAGCTGCAGGCGCTGGTGCGCGGCCACAACGTGCGGAAGCAGGCCAACATGACGCTCCGC TGCATGCAGGCGCTGG TGCGCGTCCAGGCCCGCGTCCGCN ACCAGCGGATGCGCCTCTCCCANGACTCCATCTCCTTGTCCGCCGCCCGCCGCCTCCGCCGCGCCATGCGGCAGCAGCAAGTCCTCCTACAGCGTCGACACCTCCACCTTTTTGGGATTCCAANTACACCCACNAATTCGCCCGCTTGCCGAACGCCGCTCCATCTAACGGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AF074749             [                                                          TCCTCCTGGCTCACCGCCGTCAAGCGCGCCTTCCGCTCCCCCTCTAAGGACGACTCCCCCAACAAGGCCGCCCGCCTCCGCGACGACACCGACGACGACAAGGGCAAGAGGGAGCGCCGCAGATGGCTCTTCAGGAAGTCCTCGTCGCCGTCTCCCGCGCCTCCGACACCGCCGCCGCCACAGCAGCAGCAGCAGCAATCGAGGGCGGCGGCCGTGACGGAGGAGCAGCGGCACGCCATCGCGCTCGCCGTGGCGACGGCGGCGACCGCGGAGGCGGCGGTGGCGACGGCGCANGCGGCGGCGGAGGTGGTCCGGCTGACGCGTCCGAGCTCCAGCTTCGTCCGCGAAGCACTACGCCGCCATCGTGGTCCAGACCGCGTTCCGCGGGTNCCTGGCGCGGCGCGCGCTCCGGGCGCTCAAGGGGCTCGTGAAGCTGCAGGCGCTGGTGCGCGGCCACAACGTGCGGAAGCAGGCCAACATGACGCTCCGCTTGCATGCA GCGCTGGTTGCGCGTCCAGGCCCGCGTCNGCGAACAAGCGGATGCGCCTCTCCCAGGAATCCATCTCCTTGTCCGCCG CCGCCGCCTCCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL OSC11291             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGTCCCCATCGANCCGTAACG GCGTACGCGCAG AAGCTTCGGAACCCGAGCTTCAAGAACGCGGCGGGGAGGTTCTCGTCGGAACAACGGTCGAACGTGTCGTCGTCCTGCGCGGAGAACCTCGGCGGGGACGTGGTCTCTCCGTCATCCACCACCGACCT TCGCCGCTGGCTTCGTTAAA TCC CCGCCGGCGTCGGCGAGGTGTTCGATGTAATGCCCGTTAGGTGTTCGCTGTAATGTTTTTTTTTTTACCACGACCTCGTAATTCATC                ]
[+] EMBL AU097546             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTCCCNATCGACCCGTACCGGGNGTACGCGCAGAAGCCTGCGGAGCCCGAGCTTCAAGAGCGCGGCGGGGAGGTTCTCGTCGGAGCAGCGGTCGAACGTGTCGTCGTCCTGCGCGGAGAGCCTCGGCGGGGACGTGGTCTCTCCGTCATCCACCACCGACCTCCCGCCGCTGGCTTCGTT AAGTCC CCGCCGGCGTCGGCGAGGTGTTCGATGTAATGCCCGTGAGGTGTTCGCTGTAATGTTTTTTTTTTTACCACGACCTCGTAATTCATCCAAAAAAAAAAAAAAA]


>consensus_8504#0 ACCTCCCGTACGTCAATGCCCGTGGCCGCCATTGATGGGGAAGAAGGCCGGCACCACCTC CTCCTGGCTCACCGCCGTCAAGCGCGCCTTCCGCTCCCCCTCTAAGGACGACTCCCCCAA CAAGGCCGCCCGCCTCCGCGACGACACCGACGACGACAAGGGCAAGAGGGAGCGCCGCAG ATGGCTCTTCAGGAAGTCCTCGTCGCCGTCTCCCGCGCCTCCGACACCGCCGCCGCCACA GCAGCAGCAGCAGCAATCGAGGGCGGCGGCCGTGACGGAGGAGCAGCGGCACGCCATCGC GCTCGCCGTGGCGACGGCGGCGACCGCGGAGGCGGCGGTGGCGACGGCGCAGGCGGCGGC GGAGGTGGTCCGGCTGACGCGTCCGAGCTCCAGCTTCGTCCGCGAGCACTACGCCGCCAT CGTGGTCCAGACCGCGTTCCGCGGGTNCCTGGCGCGGCGCGCGCTCCGGGCGCTCAAGGG GCTCGTGAAGCTGCAGGCGCTGGTGCGCGGCCACAACGTGCGGAAGCAGGCCAACATGAC GCTCCGCTGCATGCAGGCGCTGGTGCGCGTCCAGGCCCGCGTCCGCGACCAGCGGATGCG CCTCTCCCAGGACTCCATCTCCTTGTCCGCCGCCGCCGCCTCCGCCGCGCCATGCGGCAG CAGCAAGTCCTCCTACAGCGTCGACACCTCCACCTTCTGGGATTCCAAGTACACCCACGA CTTCGCCGCTGCCGACCGCCGCTCCATCGAGCGGTCGCGAGACGGCAGCAGCTTCGCCGC CGGCGACGACTGGGACGACCGGCCGCGGACGATAGAGGAGATCCAGGCGATGCTGCAGAC GAGGAAGGACGCCGCGCTCAAGCGTGAGAGGGCGCTCTCCTACGCCTTCTCCCATCAAAT TTGGAGGAACCCGGCGCCGTCGGTGGAGGAGATGGACGTCGATGGGCAGCCGAGGTGGGC GGAGAGGTGGATGGCGTCGCGCGCGTCGTTCGACACCAGCAGGAGCACCGTCCGCGCCTC CGCAGCGGCGGCGCCTGGGCGCGCGTCCACCGACCACCGCGACCAGGTCAAGACGCTGGA GATCGACACCGCGCGGCCCTTCTCCTACTCCACGCCACGCCGGCACGGCAACGCGTCGTA CCACGCGTCGTCGTCGCCGATGCACCGCGCGCACCACCACTCGCCGGTCACGCCGTCGCC ATCCAAGGCGCGGCCGCCGATCCAGGTGCGGTCGGCAAGCCCGCGCGTGGAGCGCGGCGG CGGCGGGGGAGGGAGCTACACCCCGAGCCTTCACTCGCACCGCCACCACGCGTCGTCGGG CGGCGCGGCGGCGGTGCCGGACTACATGGCGGCGACGGAGTCCGCCAAGGCGCGGGTGCG TTCCCAGAGCGCGCCGCGGCAGCGCCCGGCGACGCCGGAGCGCGACAGGATGTCATTCGG CGGCGGCGGCGGCGGCGGCGGAGCGAAGAAGCGGCTGTCGTTCCCCGTCCCCATCGACCC GTACCGCGCGTACGCGCAGAGCCTGCGGAGCCCGAGCTTCAAGAGCGCGGCGGGGAGGTT CTCGTCGGAGCAGCGGTCGAACGTGTCGTCGTCCTGCGCGGAGAGCCTCGGCGGGGACGT GGTCTCTCCGTCATCCACCACCGACCTCCGCCGCTGGCTTCGTTAATCCCCGCCGGCGTC GGCGAGGTGTTCGATGTAATGCCCGTGAGGTGTTCGCTGTAATGTTTTTTTTTTTACCAC GACCTCGTAATTCATCCAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)