These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8505#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2553 fasta sequence [GCCGCGCCGTTGCTGTCGCTCTGCCTATATAAACCGGCATGATCGCGAGAGGAGCACACAAGGCGTAAGCGCTGCGCACCTAGGCAGCAATATGCCCTAGCGACGCATACACATGTACCCACATAGGAGTATTTACATAGAGAGAGAGACGAAGTGAGATCGAAAGAGATAAAAAATGAAGATAATGCATAATTAGATGATGCGTATCCCGCAGATGGGCGATCTGTACCTGTAGCAGCAGGCGCTGATGGCATCTCTATCGGTGAGTCCTAAACAACAAGCTGATCTTGTTCTCCGTCAAGCTGTTTATCCTATATAACACAACAACGCCGTAGTGCTGTGCAGATATATGCATAGCCCGTCATTATCTCCTAGAGGGAGCAAATATACACCGTAGCATTGTGCAGTTTTGCAGCCCGGACGGTAAAACAATAAAGTGAAGCACAGACGAATATGTTGTGGATGTATTGTGAACTTAGCCATAGATATAAGTATCCCTAGTGGCACATACACACGCACACGTCATCTTTGTCAAGCGATTAATATGGGCTGCAAACAAATATGAGGTGAACCTAATCCTTCTGGGGGTTGGGCCGTCTAAATTATCAAAATATCAAATATTGGATGTAGATATTTATTTGTATATACTTGGGATGAGTTTGAGTCTTATTGGCATCGGACCAACCATGATTTATACATATCTAAAGTCTTCAAACCTGCCCGAGAATGTAGCGCCCACGGTGTTTTGCCCTGGTGTGGCCCTTGCCGGGTCGCGACACGTCAGCGTGCGCTGGAGGGCGGGTGGATTTCGCGGCTTCTCGTGTGTCTGCGTTGGCCCTCGTATTTTTGCACAAAAGCCCTTCTTTTTATTGATAATTTGTTTTAGGTACATGCTCTTTAGTTTGTACGGTGTTCTGTGTTCTTATGTACAGGGCCTCTACAAACTGTAATATTGTATGAAAAGAAGAGAAAATTTGGAAAAGAGGAGCGCGCTCTGAATAACATAAAGTGAGTTCATATTCATTCTGGAAGAGTTACATATTTGCCTCGTGCATGCCTCGTGCATGTCATGTACGGGAGTAATTCCTTCTCTCTCCAAATTCTACCAGATGGATGGTCTTAATCTATCTCAATGATTAAAGTCAGATTGATGAGAGCCGAAACACGGCTATGATCAAACTGCATTTATATAATCAATGGTATTAGGCTGGTCCGGCCCTCATTGGCGATTGGATCATCTGAGTGCCATTTGATATTTTCTATGATTAAAACTAGACGCCTGGTCTTCATTGGAGATCGGATCGTCTATCGGTTACTATGATACCAATAACAATGGTACTAGATATGTCCAGCCCCCATTGGTGATCGGACTGTCTAGGCGTTGTTTTCATAATTAAAATATATTTTGCCCCCATGCATATGCACAGGAGCTGTTCTTGACTCATGCATACGCCAACTACGGAGGCGTTGCGTCCGAGACCGACGAGGTTGGGCGACGTATTGGCTTAAGCTAACAAGGCTACAGCCATTCATTTGTTTCATTGTGTATGACCGACGAGGCTTGACGAAACCATGGCCGAGTGCTGACAAGGCCAGGTCATTATTATATTAACACGTCTAAAATGGATGGAAACCGGATACGCCGTTGCTGGACACTAACGAGGCAAAAGCAACCATAAAATCCATGTTTGATGAAAGCCAAGATACATGAGTGGGCGCTGACGAGGCAAAGGTCACCCGCTCCACCAGATTCCCTCCACACACCGACGTGACAGTAGTGTACTGTGACTGGGTTTTGGCGAAACAAAGCCATCCATTCTACATTCACTATATTCACCGTTAAATCTGCACCAACCTCAATCTTCGGCGAGCAAATAAATTTGAAGACGACGATCACAAAGCGCAGCTTAATCGGAGGTGTTCCATAGGCTCATCCTTTGGATGTAATTAATCGGTAGTTTTCTATTAAGCATTCCTCGCGAAGGCAAAAGGCTAACTCCTGCGGGAGCCCTCATGTTTTTGTAAACATTCATGTTAATGAATCATGATTAATAAAATACAAGGTTTCCCTATTTTCTGTGTGTTCATTGTTTTGTTTTCGTCAAACACAGAATACCAAATTAACTTAAATTGATTTGCATGGGTTGATTTGATTTGTGAATCAGCTTGGTTCTTGCCGATGGGGGTGCACAGGTTGGAGAGGCAAGTGGTGCCACATTTCTTCTCCAGAGGAAGTTTAATAATATAGCCAACTATTGCTTCAAAAATTAAAACACATCTCTATCTCTACTACTACTTAAAAAGTTAGAGGTGCTTTCGTCGTCCGTAAAAATAAAATAAAGGGCGAAAAAATTGAATCTTTATATACGATGCGGTAAAAAAAACAGTCATCAGTGTCCATGAAAAAAAAGATCCGATTAGTCCGTCCGTTAAAATAAAAAGATGAGATGCGTCCGTGAAAAGAAAAGATCCGATTAGTCAGTCCGTTAAAATAAAAGGAAAGGGCGACAAAAAGATCCGATTCTATGCGTGCGGGAAAAAAAAACGGTCCGT] [+] EMBL AK064278 [GCCGCGCCGTTGCTGTCGCTCTGCCTATATAAACCGGCATGATCGCGAGAGGAGCACACAAGGCGTAAGCGCTGCGCACCTAGGCAGCAATATGCCCTAGCGACGCATACACATGTACCCACATAGGAGTATTTACATAGAGAGAGAGACGAAGTGAGATCGAAAGAGATAAAAAATGAAGATAATGCATAATTAGATGATGCGTATCCCGCAGATGGGCGATCTGTACCTGTAGCAGCAGGCGCTGATGGCATCTCTATCGGTGAGTCCTAAACAACAAGCTGATCTTGTTCTCCGTCAAGCTGTTTATCCTATATAACACAACAACGCCGTAGTGCTGTGCAGATATATGCATAGCCCGTCATTATCTCCTAGAGGGAGCAAATATACACCGTAGCATTGTGCAGTTTTGCAGCCCGGACGGTAAAACAATAAAGTGAAGCACAGACGAATATGTTGTGGATGTATTGTGAACTTAGCCATAGATATAAGTATCCCTAGTGGCACATACACACGCACACGTCATCTTTGTCAAGCGATTAATATGGGCTGCAAACAAATATGAGGTGAACCTAATCCTTCTGGGGGTTGGGCCGTCTAAATTATCAAAATATCAAATATTGGATGTAGATATTTATTTGTATATACTTGGGATGAGTTTGAGTCTTATTGGCATCGGACCAACCATGATTTATACATATCTAAAGTCTTCAAACCTGCCCGAGAATGTAGCGCCCACGGTGTTTTGCCCTGGTGTGGCCCTTGCCGGGTCGCGACACGTCAGCGTGCGCTGGAGGGCGGGTGGATTTCGCGGCTTCTCGTGTGTCTGCGTTGGCCCTCGTATTTTTGCACAAAAGCCCTTCTTTTTATTGATAATTTGTTTTAGGTACATGCTCTTTAGTTTGTACGGTGTTCTGTGTTCTTATGTACAGGGCCTCTACAAACTGTAATATTGTATGAAAAGAAGAGAAAATTTGGAAAAGAGGAGCGCGCTCTGAATAACATAAAGTGAGTTCATATTCATTCTGGAAGAGTTACATATTTGCCTCGTGCATGCCTCGTGCATGTCATGTACGGGAGTAATTCCTTCTCTCTCCAAATTCTACCAGATGGATGGTCTTAATCTATCTCAATGATTAAAGTCAGATTGATGAGAGCCGAAACACGGCTATGATCAAACTGCATTTATATAATCAATGGTATTAGGCTGGTCCGGCCCTCATTGGCGATTGGATCATCTGAGTGCCATTTGATATTTTCTATGATTAAAACTAGACGCCTGGTCTTCATTGGAGATCGGATCGTCTATCGGTTACTATGATACCAATAACAATGGTACTAGATATGTCCAGCCCCCATTGGTGATCGGACTGTCTAGGCGTTGTTTTCATAATTAAAATATATTTTGCCCCCATGCATATGCACAGGAGCTGTTCTTGACTCATGCATACGCCAACTACGGAGGCGTTGCGTCCGAGACCGACGAGGTTGGGCGACGTATTGGCTTAAGCTAACAAGGCTACAGCCATTCATTTGTTTCATTGTGTATGACCGACGAGGCTTGACGAAACCATGGCCGAGTGCTGACAAGGCCAGGTCATTATTATATTAACACGTCTAAAATGGATGGAAACCGGATACGCCGTTGCTGGACACTAACGAGGCAAAAGCAACCATAAAATCCATGTTTGATGAAAGCCAAGATACATGAGTGGGCGCTGACGAGGCAAAGGTCACCCGCTCCACCAGATTCCCTCCACACACCGACGTGACAGTAGTGTACTGTGACTGGGTTTTGGCGAAACAAAGCCATCCATTCTACATTCACTATATTCACCGTTAAATCTGCACCAACCTCAATCTTCGGCGAGCAAATAAATTTGAAGACGACGATCACAAAGCGCAGCTTAATCGGAGGTGTTCCATAGGCTCATCCTTTGGATGTAATTAATCGGTAGTTTTCTATTAAGCATTCCTCGCGAAGGCAAAAGGCTAACTCCTGCGGGAGCCCTCATGTTTTTGTAAACATTCATGTTAATGAATCATGATTAATAAAATACAAGGTTTCCCTATTTTCTGTGTGTTCATTGTTTTGTTTTCGTCAAACACAGAATACCAAATTAACTTAAATTGATTTGCATGGGTTGATTTGATTTGTGAATCAGCTTGGTTCTTGCCGATGGGGGTGCACAGGTTGGAGAGGCAAGTGGTGCCACATTTCTTCTCCAGAGGAAGTTTAATAATATAGCCAACTATTGCTTCAAAAATTAAAACACATCTCTATCTCTACTACTACTTAAAAAGTTAGAGGTGCTTTCGTCGTCCGTAAAAATAAAATAAAGGGCGAAAAAATTGAATCTTTATATACGATGCGGTAAAAAAAACAGTCATCAGTGTCCATGAAAAAAAAGATCCGATTAGTCCGTCCGTTAAAATAAAAAGATGAGATGCGTCCGTGAAAAGAAAAGATCCGATTAGTCAGTCCGTTAAAATAAAAGGAAAGGGCGACAAAAAGATCCGATTCTATGCGTGCGGGAAAAAAAAACGGTCCGT] consensusID : consensus_8505#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1535 fasta sequence [AGAAAACCCCCGACGCAGAGGCGGCTGGCAGAGGAGGAGACGTAGCAGGGCAACCCTGCTGCGTGCTCTGATCTGATCAATCACCCATACATCCAGAAGCCTATATCAATAGATACACAATCACACGCCGTCGCCGGCGTCGGGCGCTGCACAGCACGCAAGCCTGAGCCGGCGATGAACCTTAAACCACACGTACACGCACCCACAAATATTTGATTAGGAGCTTGATTCCGATTAGGCAAAAGGAGATTAAATTCCATCGGCGGCAATTCGCGAGGAGATTAATCATTGCCGGCGACGATTGTGCCGGTGTTCGTCATCAAGCTAATCTGCATGTGCTGCAGGCCTGATAAAACATCAGGGGAGCAAAAAGATCAGATGCACGCCGTAGTGCTGCGCAGTTGCGTGGCCCGGCTGACAGAAAAGTAAAGTGGAGTACTGATGAATATGTCAGCCATGGATATAAGTATCCCCAGCGGCGCATGCACACACACGTCATCTTTGTCAAGCGATTAATATGAGCTACAAATAAATACAAGGCGAGCCTGACCTTCGTGAGGGTTGGACCGTCTAAATTATCAATATCAAATATTGGATGTGGATATTTATTTATATATAAACTTGGGATGAGTTTGAGTCTTATTGGCATCAGACCAACCATGATTTATACATATTTATATTCATGCCGGATGAGTCACATATTGCCTCGTGCATGTCATGTACGGGAGCAATTCCTTCCCTCTCCAAATTCTACCGGATGGACGGGGGATATTCGCTAAATAAAATAACGCTAGCCATGAGGGCGAGGCGTGCAGATTTAAAACACACGTCGACATCTTGGCCGAGTGTTGACGAGATGAAATGGCTGGATTATCATTATTTATGCTATGTGTAAGACCGACGAGGCCGAACGACGTATTGGCTAAAGCTAGCAAGGCTACAGCTATTCATTCATTTCATTTGTCTATGACCGACGAGGCTAGACGAAACCATGGCCGAGTGCCGACAAGGCCAGGTCACTATACTATTAACACGTCTAAAACGGACGGGAACCGGATGCACCGTTGCTGGGCACCGACAAGGCAAAAGCAACAATAAAATCCATGTTTGATGAAGGCCGGGGTACATGACTGGGCACCGACGAGGCAAAGGTCACCCGCTTCACCAAATTCTCTCCGCACTCCGACGTGGTGGTAGTGTACTGTGACCGGGTTTTGGTGAAACAAAGCCATCCGTTCCACATTCACTGTATTCAACATTAAATCTGCACCAACCTCAACCTTCGGCGAGCAAACAACTTTGAAGACGACGATCATAAAGCGCAGCTTAATCGGAGGTATTACATAGGCTCGTCCTGTGGATGTAATTAACCGGTAGCCTCATTGTTAGGCGTCGGGAATCAACGGACTGCACGCAATCTCCAGTCAGCATACCTTTTCATTAAGCATTCCTCACGAAGGCAAAAGGCGAACTCCTGCGGGAGCTCTCATGTATTTGTAAACATTCATGTTAATGAATCATGATTAATAAAATAC] [+] EMBL AK071227 [AGAAAACCCCCGACGCAGAGGCGGCTGGCAGAGGAGGAGACGTAGCAGGGCAACCCTGCTGCGTGCTCTGATCTGATCAATCACCCATACATCCAGAAGCCTATATCAATAGATACACAATCACACGCCGTCGCCGGCGTCGGGCGCTGCACAGCACGCAAGCCTGAGCCGGCGATGAACCTTAAACCACACGTACACGCACCCACAAATATTTGATTAGGAGCTTGATTCCGATTAGGCAAAAGGAGATTAAATTCCATCGGCGGCAATTCGCGAGGAGATTAATCATTGCCGGCGACGATTGTGCCGGTGTTCGTCATCAAGCTAATCTGCATGTGCTGCAGGCCTGATAAAACATCAGGGGAGCAAAAAGATCAGATGCACGCCGTAGTGCTGCGCAGTTGCGTGGCCCGGCTGACAGAAAAGTAAAGTGGAGTACTGATGAATATGTCAGCCATGGATATAAGTATCCCCAGCGGCGCATGCACACACACGTCATCTTTGTCAAGCGATTAATATGAGCTACAAATAAATACAAGGCGAGCCTGACCTTCGTGAGGGTTGGACCGTCTAAATTATCAATATCAAATATTGGATGTGGATATTTATTTATATATAAACTTGGGATGAGTTTGAGTCTTATTGGCATCAGACCAACCATGATTTATACATATTTATATTCATGCCGGATGAGTCACATATTGCCTCGTGCATGTCATGTACGGGAGCAATTCCTTCCCTCTCCAAATTCTACCGGATGGACGGGGGATATTCGCTAAATAAAATAACGCTAGCCATGAGGGCGAGGCGTGCAGATTTAAAACACACGTCGACATCTTGGCCGAGTGTTGACGAGATGAAATGGCTGGATTATCATTATTTATGCTATGTGTAAGACCGACGAGGCCGAACGACGTATTGGCTAAAGCTAGCAAGGCTACAGCTATTCATTCATTTCATTTGTCTATGACCGACGAGGCTAGACGAAACCATGGCCGAGTGCCGACAAGGCCAGGTCACTATACTATTAACACGTCTAAAACGGACGGGAACCGGATGCACCGTTGCTGGGCACCGACAAGGCAAAAGCAACAATAAAATCCATGTTTGATGAAGGCCGGGGTACATGACTGGGCACCGACGAGGCAAAGGTCACCCGCTTCACCAAATTCTCTCCGCACTCCGACGTGGTGGTAGTGTACTGTGACCGGGTTTTGGTGAAACAAAGCCATCCGTTCCACATTCACTGTATTCAACATTAAATCTGCACCAACCTCAACCTTCGGCGAGCAAACAACTTTGAAGACGACGATCATAAAGCGCAGCTTAATCGGAGGTATTACATAGGCTCGTCCTGTGGATGTAATTAACCGGTAGCCTCATTGTTAGGCGTCGGGAATCAACGGACTGCACGCAATCTCCAGTCAGCATACCTTTTCATTAAGCATTCCTCACGAAGGCAAAAGGCGAACTCCTGCGGGAGCTCTCATGTATTTGTAAACATTCATGTTAATGAATCATGATTAATAAAATAC] consensusID : consensus_8505#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 619 fasta sequence [TACACGCCGCCGCCAGGCGCTGCGCCAAGATGCAGGCCTGTGCTGGTGATGGTGAATATTATAGCCACACAAATATTTGGGAGGAATCAGGAGAAGGCAAAGTAATCGTCAACGTCAAGGAGTCTGCTTCATCGTCGCTGGTGCAACTCTAAATTAATCATTCGCCTTCCGTCGAGCCACGCTTCATCAACATAATTTCTTCGTCAAGCTATTTGTCATCGACAACACAACAGCGTCGTAGTACTGTGCAGATATTATGCATAGCCCGACATTATCTTCTAGAGGGAGCAAATATACACCGTAGGGTTGTGCAGTTGCACAGCCTGGACAGTAAAACAGTAAAGTGGAGTACTGGTGAATATGTCGCGGATGCGTTGTGAATTGTAGCCATGGATATAAGTATCCCCAGCGGCGCATGCAGACGCACACGTCATCTTTGTCAAGCGATTAATATGGGCCGCAAATAAATACAAGGCGAGCCTGACCCTCGTGAGGGTTGAACCGTCTAAATTATCAATATCAAATATTGGATGTAGATATTTATTTGTATAAACTTAGGATGAGTTTGAGTCTTATTGGCATCAGACCAACCATGATCTATACATATTTATATTCATGC] [+] EMBL CA766069 [TACACGCCGCCGCCAGGCGCTGCGCCAAGATGCAGGCCTGTGCTGGTGATGGTGAATATTATAGCCACACAAATATTTGGGAGGAATCAGGAGAAGGCAAAGTAATCGTCAACGTCAAGGAGTCTGCTTCATCGTCGCTGGTGCAACTCTAAATTAATCATTCGCCTTCCGTCGAGCCACGCTTCATCAACATAATTTCTTCGTCAAGCTATTTGTCATCGACAACACAACAGCGTCGTAGTACTGTGCAGATATTATGCATAGCCCGACATTATCTTCTAGAGGGAGCAAATATACACCGTAGGGTTGTGCAGTTGCACAGCCTGGACAGTAAAACAGTAAAGTGGAGTACTGGTGAATATGTCGCGGATGCGTTGTGAATTGTAGCCATGGATATAAGTATCCCCAGCGGCGCATGCAGACGCACACGTCATCTTTGTCAAGCGATTAATATGGGCCGCAAATAAATACAAGGCGAGCCTGACCCTCGTGAGGGTTGAACCGTCTAAATTATCAATATCAAATATTGGATGTAGATATTTATTTGTATAAACTTAGGATGAGTTTGAGTCTTATTGGCATCAGACCAACCATGATCTATACATATTTATATTCATGC] consensusID : consensus_8505#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 589 fasta sequence [GGCAGCGGGCGGGCAGCCGGCAGCGGAGGAGCTCGCTCGGGCAGCCGGTGGCGGAGGCGGAGGTAGAAGGCGCTCTTCGACGACCTCCACCAACGCCCTCGTCGGCGCCGCCCCGCCCGCGACTGGGCGCCGCCCCTCCTAGGACCAGGTGATGCCCTCGACATGTCGAGCCACCGAACTCGCCTCGCCGGATCACCGCCCTCACCGCGATATGCCAGAGGTTATTTTGGTCATTTATGCAAAAACCTGACAGATCAATGGATGCTAACATCAGTGAACTCACGGTAGTGGCATGAGAGGGTGTGCAAATTTGATTCAATGGCATATAAGGAAAGAGCCAATTTTGTGTGGCATATCAGGGATCGGACCAAATTTCAATGGCATATAAGGGATTCTCTCTTCCATCAATGATGACCTTTTATCTTTGAAGGTTCTAATCGTGACACGTCATCACCAATGAGGATTGTTTGATGAAACATTTTGTTTGATGAAAACAACACATAGAAAATAGGGAAACCCTGTATTTTATTAATCACGATTCATTATCATGAATGTTTACAAATACATCAGGGCTCCCACAGGAGTTCGC] [+] EMBL AK062400 [GGCAGCGGGCGGGCAGCCGGCAGCGGAGGAGCTCGCTCGGGCAGCCGGTGGCGGAGGCGGAGGTAGAAGGCGCTCTTCGACGACCTCCACCAACGCCCTCGTCGGCGCCGCCCCGCCCGCGACTGGGCGCCGCCCCTCCTAGGACCAGGTGATGCCCTCGACATGTCGAGCCACCGAACTCGCCTCGCCGGATCACCGCCCTCACCGCGATATGCCAGAGGTTATTTTGGTCATTTATGCAAAAACCTGACAGATCAATGGATGCTAACATCAGTGAACTCACGGTAGTGGCATGAGAGGGTGTGCAAATTTGATTCAATGGCATATAAGGAAAGAGCCAATTTTGTGTGGCATATCAGGGATCGGACCAAATTTCAATGGCATATAAGGGATTCTCTCTTCCATCAATGATGACCTTTTATCTTTGAAGGTTCTAATCGTGACACGTCATCACCAATGAGGATTGTTTGATGAAACATTTTGTTTGATGAAAACAACACATAGAAAATAGGGAAACCCTGTATTTTATTAATCACGATTCATTATCATGAATGTTTACAAATACATCAGGGCTCCCACAGGAGTTCGC] consensusID : consensus_8505#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 428 fasta sequence [CTATCTCTATCCCAATCTCTCCCCCCTCTCTCCCTTCTCCCTCCCCTCACAGGCAGCGGGCGGGCGAGGACGGGGGCAGGCAAAGCTGCTCGGGCACTGGCGGCGACGGCGGGCGGCTGGGACGGAGGCAGAGTGGGCGGCAGGCGACGGAGGCAGAGCTCCCTGGGCGGCTGAGGCGGAGCCGGAGCGGGCGGGCAGCCGGCAGCGGAGGAGCTCGCTCGGGCAGCCGGTGGCGGAGGCGGAGGTAGAAGGCGCTCTTCGACGACGCCGCGGGTAGCGGCGACGCCTCCTTCGTCTCCTCCCACTACAACCGCCGCGCGGACCACACCTACTCGTCGTCGTCATCCATGCGCGCGATGGCCGCCGGTATCGGGGAGGATGGGGGAAAGCGGCGGAAGTTGGGGACGAGACGCGCGATGGGTGCCGGT] [+] EMBL AU184053 [CTATCTCTATCCCAATCTCTCCCCCCTCTCTCCCTTCTCCCTCCCCTCACAGGCAGCGGGCGGGCGAGGACGGGGGCAGGCAAAGCTGCTCGGGCACTGGCGGCGACGGCGGGCGGCTGGGACGGAGGCAGAGTGGGCGGCAGGCGACGGAGGCAGAGCTCCCTGGGCGGCTGAGGCGGAGCCGGAGCGGGCGGGCAGCCGGCAGCGGAGGAGCTCGCTCGGGCAGCCGGTGGCGGAGGCGGAGGTAGAAGGCGCTCTTCGACGACGCCGCGGGTAGCGGCGACGCCTCCTTCGTCTCCTCCCACTACAACCGCCGCGCGGACCACACCTACTCGTCGTCGTCATCCATGCGCGCGATGGCCGCCGGTATCGGGGAGGATGGGGGAAAGCGGCGGAAGTTGGGGACGAGACGCGCGATGGGTGCCGGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8505#0 GCCGCGCCGTTGCTGTCGCTCTGCCTATATAAACCGGCATGATCGCGAGAGGAGCACACA 60 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 -----------------------------AGAAAACCCCCGACGCAGAGGCGGCTGGCAG 31 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 AGGCGTAAGCGCTGCGCACCTAGGCAGCAATATGCCCTAGCGACGCATA-CACATGTACC 119 consensus_8505#2 ------------TACACGCC---GCCGCCAGGCGCTGCGCCAAGATGCA-GGCCTGTGCT 44 consensus_8505#1 AGGAGGAGACGTAGCAGGGCAACCCTGCTGCGTGCTCTGATCTGATCAATCACCCATACA 91 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 CACATAGGAGTATTTACATAGAGAGAGAGACGAAGTGAGATCGAAAGAGATAAAAAATGA 179 consensus_8505#2 GGTGATGGTGAATAT-TATAGCCACACAAATAT-------TTGGGAGGAATCAGGA--GA 94 consensus_8505#1 TCCAGAAGCCTATATCAATAGATACACAATCACA-CGCCGTCGCCGGCGTCGGGCGCTGC 150 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 -------------------------------------GGCAGCGGGCGGGCAGCCGGCAG 23 consensus_8505#0 AGATAATGCATAATTAGATGATGCGTATCCCGCAGATGGGCGATCTGTACCTGTAGCAGC 239 consensus_8505#2 AGGCAAAGTAATCGTCAACGTCAAGGAGTCTGCT------TCATCGTCGCTGGTGCAACT 148 consensus_8505#1 ACAGCACGCAAGCCTGAGCCGGCGATGAACCTTAAACCACACGTACACGCACCCACAAAT 210 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 CGGAGGAGCTCGCTCGGGCAGCCGGTGGCGGAGGCGGAGGTAGAAGGCGCTCTTCGACGA 83 consensus_8505#0 AGGCGCTGATGGCATCTCTATCGGTGAGTCCTAAA-CAAC--AAGCTGATC--TTGTTCT 294 consensus_8505#2 CTAAATTAATCATTCGCCTTCCGTCGAGCCACGCTTCATC--AACATAAT------TTCT 200 consensus_8505#1 ATTTGATTAGGAGCTTGATTCCGATTAGGCAAAAGGAGATTAAATTCCATCGGCGGCAAT 270 consensus_8505#4 -----------------------------CTATCTCTATCCCAATCTCTCC---CCCCTC 28 consensus_8505#3 CCTCCACCAACGCCCTCGTCGGCGCCGCCCCGCCCGCGACTGGGCGCCGCC---CCTCCT 140 * consensus_8505#0 CCGTCAAGCTGTTTATCCTATATAAC-ACAACAACGCCGTAGT--GCTGTGCAGATAT-A 350 consensus_8505#2 TCGTCAAGCTATTTGTCATCGACAAC-ACAACAGCGTCGTAGT--ACTGTGCAGATATTA 257 consensus_8505#1 TCGCGAGGAGATTAATCATTGCCGGCGACGATTGTGCCGGTGTTCGTCATCAAGCTAATC 330 consensus_8505#4 TCTCCCTTCTCCCTCCCCTCACAGGCAGCGGGCGGGCGAGGAC--GGGGGCAGGCAAAGC 86 consensus_8505#3 AGGACCAGGTGATGCCCTCGACATGT--CGAGCCACCGAACTCGCCTCGCCGGATCACCG 198 * * * consensus_8505#0 TGCATA---------GCCCGTCATTATCTCC------TAGAG-GGAGCAAATATACACCG 394 consensus_8505#2 TGCATA---------GCCCGACATTATCTTC------TAGAG-GGAGCAAATATACACCG 301 consensus_8505#1 TGCATGT-GCTGCAGGCCTGATAAAACATCAGGGGAGCAAAA-AGATCAGATGCACGCCG 388 consensus_8505#4 TGCTCGG-GC-----ACTGGCGGCGACGGCGGGCGGCTGGGACGGAGGCAGAGTGGGCGG 140 consensus_8505#3 CCCTCACCGCGATATGCCAGAGGTTATTTTGGTCATTTATGCAAAAACCTGACAGATCAA 258 * * * * * * consensus_8505#0 TAGCATTGTGCAGTTTTGCAGCCCGGACGGTAAAACAATAAAGTGAAGCACAGACGAATA 454 consensus_8505#2 TAGGGTTGTGCAGTTGCACAGCCTGGACAGTAAAACAGTAAAGTGGAGTACTGGTGAATA 361 consensus_8505#1 TAGTGCTGCGCAGTTGCGTGGCCCGGCTGACAGAAAAGTAAAGTGGAGTACTGATGAATA 448 consensus_8505#4 CAGGCGACGGAGGCAGAGCTCCCTGGGCGGCTGAGGCG-GAGCCGGAG--CGGGCGGGCA 197 consensus_8505#3 TGGATGCTAACATCAGTGAACTC---ACGGTAGTGGCATGAGAGGGTGTGCAAATTTG-A 314 * * * * * * * consensus_8505#0 TGTTGTGGATGTATTGTGAACT-TAGCCATAGATATAAGTATCCCTAGTGGCACATACAC 513 consensus_8505#2 TGTCGCGGATGCGTTGTGAATTGTAGCCATGGATATAAGTATCCCCAGCGGCGCATGCAG 421 consensus_8505#1 TGTC--------------------AGCCATGGATATAAGTATCCCCAGCGGCGCATGCAC 488 consensus_8505#4 GCCGGCAG---------------CGGAGGAGCTCGCTCGGGCAGCCGGTGGCGGAGGCGG 242 consensus_8505#3 TTCAATGG---CATATAAGGAAAGAGCCAATTTTGTGTGGCATATCAGGGATCGGACCAA 371 * * * * * consensus_8505#0 ACGCACACGTCA-TCTTTGTCAA----GCGATTAATATGGGCTGCAAACAAATATGAGGT 568 consensus_8505#2 ACGCACACGTCA-TCTTTGTCAA----GCGATTAATATGGGCCGCAAATAAATACAAGGC 476 consensus_8505#1 A--CACACGTCA-TCTTTGTCAA----GCGATTAATATGAGCTACAAATAAATACAAGGC 541 consensus_8505#4 AGGTAGAAGGCGCTCTTCGACGACGCCGCGGGTAGCGGCGACGCCTCCTTCGTCTCCTCC 302 consensus_8505#3 ATTTCAATGGCA-TATAAGGGATTCTCTCTTCCATCAATGATGAC-CTTTTATCTTTGAA 429 * * * * * * * * * * * consensus_8505#0 GAACCTAATCCTTCTGGGGGTTGGGCCGTCTAAATTATCAAAATATCAAATATTGGATGT 628 consensus_8505#2 GAGCCTGACCCTCGTGAGGGTTGAACCGTCTAAATTATCA--ATATCAAATATTGGATGT 534 consensus_8505#1 GAGCCTGACCTTCGTGAGGGTTGGACCGTCTAAATTATCA--ATATCAAATATTGGATGT 599 consensus_8505#4 CACTACAACCGCCGCGCGGACCACACCTACTCG-TCGTCGTCAT-CCATGCGCGCGATGG 360 consensus_8505#3 GGTTCTAATCGTGACACGT-CATCACCAATGAGGATTGTTTGATGAAACATTTTGTTTGA 488 * * * ** ** * ** consensus_8505#0 AGATATTTATTTGTATATA--CTTGGGATGAGTTTGAGTCTTATTGGCATCGGACCAACC 686 consensus_8505#2 AGATATTTATTTGTATAAA--CTTAGGATGAGTTTGAGTCTTATTGGCATCAGACCAACC 592 consensus_8505#1 GGATATTTATTTATATATAAACTTGGGATGAGTTTGAGTCTTATTGGCATCAGACCAACC 659 consensus_8505#4 CCGCCGGTATCGGGGAGGA----TGGGGGAAAGCGGCGGAAGTTGGGGACGAGACGCGCG 416 consensus_8505#3 TGAAAACAACACATAGAAAA---TAGGGAAACCCTGTATTTTATTAAT-CACGATTCATT 544 * * * ** * * * ** consensus_8505#0 ATGATTTATACATATCTAAAGTCTTCAAACCTGCCCGAGAATGTAGCGCCCACGGTGTTT 746 consensus_8505#2 ATGATCTATACATATTTATATTCATGC--------------------------------- 619 consensus_8505#1 ATGATTTATACATATTTATATTCATGCCGGATGAGTCACA-TATTGCCTCGTGCATGTCA 718 consensus_8505#4 ATGG---GTGCCGGT--------------------------------------------- 428 consensus_8505#3 ATCATGAATGTTTACAAATACATCAGGGCTCCCACAGGAGTTCGC--------------- 589 ** * consensus_8505#0 TGCCCTGGTGTGGCCCTTGCCGGGTCGCGACACGTCAGCGTGCGCTGGAGGGCGGGTGGA 806 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 TGTACGGGAGCAATTCCTTCCCTCTCCAAATTCTACCGGATGGACGGGGGATATTCGCTA 778 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 TTTCGCGGCTTCTCGTGTGTCTGCGTTGGCCCTCGTATTTTTGCACAAAAGCCCTTCTTT 866 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 AATAAAATAACGCTAGCCATGAGGGCGAGGCGTGCAGATTTAAAACACACGTCGACATCT 838 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 TTATTGATAATTTGTTTTAGGTACATGCTCTTTAGTTTGTACGGTGTTCTGTGTTCTTAT 926 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 TGGCCGAGTGTTGACGAGATGAAATGGCTG---GATTATCATTATTTATGCTATGTGTAA 895 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 GTACAGGGCCTCTACAAACTGTAATATTGTATGAAAAGAAGAGAAAATTTGGAAAAGAGG 986 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 GACCGACGAGGCCGAACGACGTATTGGCTAAAGCTAGCAAGGCTACAGCTATTCATTCAT 955 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 AGCGCGCTCTGAATAACATAAAGTGAGTTCATATTCATTCTGGAAGAGTTACATATTTGC 1046 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 TTCATTTGTCTATGACCGACGAGGCTAGACGAAACCATGGCCGAGTGCCGACAAGGCCAG 1015 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 CTCGTGCATGCCTCGTGCATGTCATGTACGGGAGTAATTCCTTCTCTCTCCAAATTCTAC 1106 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 GTCAC-TATACTATTAACACGTCTAAAACGGACGGGAACCGGATGCACC----GTTGCTG 1070 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 CAGATGGATGGTCTTAATCTATCTCAATGATTAAAGTCAGATTGATGAGAGCCGAAACAC 1166 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 GGCACCGACAAGGCAAAAGCAACAATAAAATCCATGTTTGATGAAGGCCGG--GGTACAT 1128 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 GGCTATGATCAAACTGCATTTATATAATCAATGGTATTAGGCTGGTCCGGCCCTCAT--- 1223 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 GACTGGGCACCGACGAGGCAAAGGTCACCCGCTTCACCAAATTCTCTCCGCACTCCGACG 1188 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 TGGCGATTGGATCATCTGAGTGCCATTTGATATTTTCTA-TGATTAAAACTAGACGCCTG 1282 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 TGGTGGTAGTGTACTGTGACCGGGTTTTGGTGAAACAAAGCCATCCGTTCCACATTCACT 1248 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 GTCTTCATTGG-AGATCGGATCGTCTATCGGTTACTATGATACCAATAACAATGGT-ACT 1340 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 GTATTCAACATTAAATCTGCACCAACCTCAACCTTCGGCGAGCAAACAACTTTGAAGACG 1308 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 AGATATGTCCAGCCCCCATTGGTGATCGGACTGTCTAGGCGTTGTTTTCATAATTAAAAT 1400 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ACGATCATAAAGCGCAGCTTAATCGGAGGTATTACATAGGCTCGTCCTGTGGATGTAATT 1368 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 ATATTTTGCCCCCATGCATATGCACAGGAGCTGTTCTTGACTCATGCATACGCCAACTAC 1460 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 AACCGGTAGCCTCATTGTTAGGCGTCGGGAATCAACGGACTGCACGCAATCTCCAGTCAG 1428 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 GGAGGCGTTGCGTCCGAGA---CCGACGAGGTTGGGCGACGTATTGGCTTAAGCTAACAA 1517 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 CATACCTTTTCATTAAGCATTCCTCACGAAGGCAAAAGGCGAACTCCTGCGGGAGCTCTC 1488 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 GGCTACAGCCATTCATTTGTTTCATTGTGT-ATGACCGACGAGGCTTGACGAAACCATGG 1576 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ATGTATTTGTAAACATTCATGTTAATGAATCATGATTAATAAAATAC------------- 1535 consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 CCGAGTGCTGACAAGGCCAGGTCATTATTATATTAACACGTCTAAAATGGATGGAAACCG 1636 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 GATACGCCGTTGCTGGACACTAACGAGGCAAAAGCAACCATAAAATCCATGTTTGATGAA 1696 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 AGCCAAGATACATGAGTGGGCGCTGACGAGGCAAAGGTCACCCGCTCCACCAGATTCCCT 1756 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 CCACACACCGACGTGACAGTAGTGTACTGTGACTGGGTTTTGGCGAAACAAAGCCATCCA 1816 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 TTCTACATTCACTATATTCACCGTTAAATCTGCACCAACCTCAATCTTCGGCGAGCAAAT 1876 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 AAATTTGAAGACGACGATCACAAAGCGCAGCTTAATCGGAGGTGTTCCATAGGCTCATCC 1936 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 TTTGGATGTAATTAATCGGTAGTTTTCTATTAAGCATTCCTCGCGAAGGCAAAAGGCTAA 1996 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 CTCCTGCGGGAGCCCTCATGTTTTTGTAAACATTCATGTTAATGAATCATGATTAATAAA 2056 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 ATACAAGGTTTCCCTATTTTCTGTGTGTTCATTGTTTTGTTTTCGTCAAACACAGAATAC 2116 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 CAAATTAACTTAAATTGATTTGCATGGGTTGATTTGATTTGTGAATCAGCTTGGTTCTTG 2176 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 CCGATGGGGGTGCACAGGTTGGAGAGGCAAGTGGTGCCACATTTCTTCTCCAGAGGAAGT 2236 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 TTAATAATATAGCCAACTATTGCTTCAAAAATTAAAACACATCTCTATCTCTACTACTAC 2296 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 TTAAAAAGTTAGAGGTGCTTTCGTCGTCCGTAAAAATAAAATAAAGGGCGAAAAAATTGA 2356 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 ATCTTTATATACGATGCGGTAAAAAAAACAGTCATCAGTGTCCATGAAAAAAAAGATCCG 2416 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 ATTAGTCCGTCCGTTAAAATAAAAAGATGAGATGCGTCCGTGAAAAGAAAAGATCCGATT 2476 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 AGTCAGTCCGTTAAAATAAAAGGAAAGGGCGACAAAAAGATCCGATTCTATGCGTGCGGG 2536 consensus_8505#2 ------------------------------------------------------------ consensus_8505#1 ------------------------------------------------------------ consensus_8505#4 ------------------------------------------------------------ consensus_8505#3 ------------------------------------------------------------ consensus_8505#0 AAAAAAAAACGGTCCGT 2553 consensus_8505#2 ----------------- consensus_8505#1 ----------------- consensus_8505#4 ----------------- consensus_8505#3 ----------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||