These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8510#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1103 fasta sequence [AAGTTAGAGGATCCTGGTTCTTACGGACGCAACATATCCCATCTGTTTTTCCATCGCCAATTAACCAT-GTGGTACTCGTATCGATACAAGTCCATTCTGAAAACTGTGGCATGGGACTCAACAAATCAAAGCTCAGTAGAAACCGGTACCCTCCCAAGAATAGACTTTGTAGCAAACATTCAACTGTATCATATACATCTTTTCTTTTTCGTTAGTAACTTGCAACTAAAACTGCGGTTACCTGTAGTATGCATGATTGAACAAGTCAGTCCACCTGCTAACTCAAGAGGATTCTTCTCATCACATCGCATCAAAGAGCGAAAAGTCCTTATTAGGATTAGTGCTGAAAGCAG-CACTAGTGAGGTCAAGTTGGGGTCAAA-TGTATGAATTGTCAGCGCCTTAGCGTCGTCTTTTTCTGGAAGAGTGAGTATCCAACAAGAGCAGACAGTAATATAGTCCATAAAACCATATTAATTGTATTCCATCTCTCAAGCCTCCTT-AACCTAGATTGCACATCATCAAGCACACTATCTGTAGAAGAAACTTCTCTTGTAGGTGAAGATAAATCTGAATTGAAGCTACCTCCTTGTGACTGGATAAACTCAACAAGTTCTTGTAGCCTAGCAGC-TTGTTGGTTATGAATACCAGTATGAACATTTTCATCCGCTGGCAAACTCTCCAGAATAATTTGAAGATAGCTCTTTGTCGTGTATGAATCATCTAAGCTGAGTGCAGATGCAGCAGAGGAAACTATTTCCTTGTTCGTTCCTTTAATCTGAAGATACGGATTTGTCTCACCTTGTAGACTATCAACCTCTATAAGAATCTTTCCATCTTGGTAAATCGTTGCAGAAGCTTCAATATATGCCACAGCTCGGTAACCAAGCTTAAGAAGTCCTGCGACAGTGCTGGCACTAATGTCAAAATCAACCTTTGGCTGGATAATAAAATTTCCTTCCCTTATAGGCTCTCGTATTAACAGTGCAAATCTTCCTTCACATATTCGGACCCTAATACACTCGCCTTCTGTCAGCTGTCCACTCAACGGTATGCCAGGAAGTCTTAGATACACATCAGTAAAATTCTGGACACAGCTGCAGGCT] [+] EMBL CB676123 [AAGTTAGAGGATCCTGGTTCTTACGGACGCAACATATCCCATCTGTTTTTCCATCGCCAATTAACCAT GTGGTACTCGTATCGATACAAGTCCATTCTGAAAACTGTGGCATGGGACTCAACAAATCAAAGCTCAGTAGAAACCGGTACCCTCCCAAGAATAGACTTTGTAGCAAACATTCAACTGTATCATATACATCTTTTCTTTTTCGTTAGTAACTTGCAACTAAAACTGCGGTTACCTGTAGTATGCATGATTGAACAAGTCAGTCCACCTGCTAACTCAAGAGGATTCTTCTCATCACATCGCATCAAAGAGCGAAAAGTCCTTATTAGGATTAGTGCTGAAAGCAG CACTAGTGAGGTCAAGTTGGGGTCAAA TGTATGAATTGTCAGCGCCTTAGCGTCGTCTTTTTCTGGAAGAGTGAGTATCCAACAAGAGCAGACAGTAATATAGTCCATAAAACCATATTAATTGTATTCCATCTCTCAAGCCTCCTT AACCTAGATTGCACATCATCAAGCACACTATCTGTAGAAGAAACTTCTCTTGTAGGTGAAGATAAATCTGAATTGAAGCTACCTCCTTGTGACTGGATAAACTCAACAAGTTCTTGTAGCCTAGCAGC TTGTTGGTTATGAATACCAGTATGAACATTTTCATCCGCTGGCAAACTCTCCAGAATAATTTGAAGATAGCTCTTTGTCGTGTATGAATCATCTAAGCTGAGTGCAGATGCAGCAGAGGAAACTATTTCCTTGTTCGTTCCTTTAATCTGAAGATACGGATTTGTCTCACCTTGTAGACTA ] [-] EMBL BI813519 [ tttttTTTTTCCATCGGCAATTAACCATGGTGGTACTCGTATCGATACAAGTCCATTCTGAAAACTGGGGCATGGGACTCAACAAATCAAAGCTCAGTAGAAACCGGTACCCTCCCAAGAATAGACTTGGTAGCAAACATTCAACGGTATCATATACATCTTTTCTTTTTCGTTAGTAACTTGCAACTAAAACTGCGGTTACCTGTAGTATGCATGATTGAACAAGTCAGTCCACCTGCTAACTCAAGAGGATTCTTCTCATCACATCGCATCAAAGAGCGAAAAGTCCTTATTAGGATTAGGGCTGAAAGCAGCCACTAGTGAGGTCAAGTGGGGGTCAAAGTGTATGAATGGTCAGCGCCTTAGCGTCGTCTTTTTCTGGAAGAGTGAGTATCCAACAAGAGCAGACAGTAATATAGTCCATAAAA CATATTAATTG CTTCCATCTCTCAAGACTCCTTAAACTTAGAATGTGCATtca ] [+] EMBL CB676122 [ ATTCTGAAAACTGTGGCATGGGACTCAACAAATCAAAGCTCAGTAGAAACCGGTACCCTCCCAAGAATAGACTTTGTAGCAAACATTCAACTGTATCATATACATCTTTTCTTTTTCGTTAGTAACTTGCAACTAAAACTGCGGTTACCTGTAGTATGCATGATTGAACAAGTCAGTCCACCTGCTAACTCAAGAGGATTCTTCTCATCACATCGCATCAAAGAGCGAAAAGTCCTTATTAGGATTAGTGCTGAAAGCAG CACTAGTGAGGTCAAGTTGGGGTCAAA TGTATGAATTGTCAGCGCCTTAGCGTCGTCTTTTTCTGGAAGAGTGAGTATCCAACAAGAGCAGACAGTAATATAGTCCATAAAACCATATTAATTGTATTCCATCTCTCAAGCCTCCTT AACCTAGATTGCACATCATCAAGCACACTATCTGTAGAAGAAACTTCTCTTGTAGGTGAAGATAAATCTGAATTGAAGCTACCTCCTTGTGACTGGATAAACTCAACAAGTTCTTGTAGCCTAGCAGC TTGTTGGTTATGAATACCAGTATGAACATTTTCATCCGCTGGCAAACTCTCCAGAATAATTTGAAGATAGCTCTTTGTCGTGT ] [+] EMBL CF311785 [ tttttTCAGTAGAAACCGGTACCCTCCCAAGAATAGACTTTGTAGCAATCATTCAACTGTATCATATACATCTTTTCTTTTTCGTTAGTAACTTGCAACTAAAACTGCGGTTACCTGTAGTATGCATGATTGAACAAGTCAGTCCACCTGCTAACTCAAGAGGATTCTTCTCATCACATCGCATCAAAGAGCGAAAAGTCCTTATTAGGATTAGTGCTGAAAGCAG CACTAGTGAGGTCAAGTTGGGGTCAAA TGTATGAATTGTCAGCGCCTTAGCGTCGTCTTTTTCTGGAAGAGTGAGTATCCAACAAGAGCAGACAGTAATATAGTCCATAAAACCATATTAATTGTATTCCATCTCTCAAGCCTCCTT AACCTAGATTGCACATCATCAAGCACACTATCTGTAGAAGAAACTTCTCTTGTAGGTGAAGATAAATCTGAATTGAAGCTACCTCCTTGTGACTGGATAAACTCAACAAGTTCTTGTAGCCTAGCAGCTTTGTTGGTTATGAATACCAGTATGAACATTTTCATCCGCTGGCAAACTCTCCAGAATAATTTGAAGATAGCTCTTTGTCGTGTATGAATCATCTAAGCTGAGTG ] [-] EMBL CF311784 [ ATCCAACAAGAGCAGACAGTAATATAGTCCATAAAACCATATTAATTGTATTCCATCTCTCAAGCCTCCTT AACCTAGATTGCACATCATCAAGCACACTATCTGTAGAAGAAACTTCTCTTGTAGGTGAAGATAAATCTGAATTGAAGCTACCTCCTTGTGACTGGATAAACTCAACAAGTTCTTGTAGCCTAGCAGC TTGTTGGTTATGAATACCAGTATGAACATTTTCATCCGCTGGCAAACTCTCCAGAATAATTTGAAGATAGCTCTTTGTCGTGTATGAATCATCTAAGCTGAGTGCAGATGCAGCAGAGGAAACTATTTCCTTGTTCGTTCCTTTAATCTGAAGATACGGATTTGTCTCACCTTGTAGACTATCAACCTCTATAAGAATCTTTCCATCTTGGTAAATCGTTGCAGAAGCTTCAATATATGCCACAGCTCGGTAACCAAGCTTAAGAAGTCCTGCGACAGTGCTGGCACTAATGTCAAAATCAACCTTTGGCTGGATAATAAAATTTCCTTCCCTTATAGGCTCTCGTATTAACAGTGCAAATCTTCCTTCACATATTCGGACCCTAATACACTCGCCTTCTGTCAGCTGTCCACTCAACGGTATGCCAGGAAGTCTTAGATACACATCAGTAAAATTCTGGACACAGCTGCAGGCT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||