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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8515#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3404 fasta sequence
[CCACCGGTCACCCCTGCAGGCCTGCAGCTGCTCCAACGGCTTTCCCCCTCCGTCACCCACTCCCTATCCGCCTATCCCATCCCAAAACCTCCTCTCCCCTCCCCCCCCGGCAGCCGCCGCCTCCAAAGTTCTCTGCTTTCGTCACCGCCAGCCTCCCTCCAAGGTATTGTTCGATCCGGAGTAGTGAGTCTATGCCCTTGTCCGGATCCGAATGGCTGCCCTGCGGATCTGCACGCCGGGTGGTGGTGCTCCGGAGGCCAGAAGAGGCAGTCTTGCTGCTGCCGGGAGCGCGGTTCAGCATGGACCGGATTTGATCGGGTTCAGTTCTTGGGTGCTGCCAATCAGCGCCGGATATGCCGTGGACCGGAGGCACGCAGCAGCTGGTGGAGTTGCCGCATGCCATGGGCTCTCGTGTGCTGACAGTGGGAGGAGGAAGAATCATCCCAGGGCAAGTCTGGTGAATGGTGTGGTTTCATCTCTGGAGGACAGTAGCGGCGGGGAGCCTGCGCTATGCGTATCTGATTCACCTGAAGACGCTAGCTCCAGTGGAAAAGTGTTGTCCGATTTGCGTCGGGACATGGTGGATGGTATTAGTGGTATTCCAAGAATTTCTGCGGGAAAGAAGAAGGGGATGAAGTTCAGGAGAAGAGGGCAGGGTGGAAATAGATTGACACGGCGTAGTGCTCCGAGGCGTGCCAGTGGAAAGAGTGGGCAAGATCAGAGGATTTTGTTGAGCGAGGATGATATTGCTGCAATTTTGTCCAGTGTTACCCATGAATCTAGCATCGAGGAGTGCAATTCTGTTCTCATCTGTCTCGAGAAGTATAGTGATAAGACAGCTCTTGGTTTCTTTGAGTGGATGAAGGCTAATGGAAAGCTGAAGGGAAATGCTGAGGCGTATCACCTAGCGCTTCAAGCGATCGCCTGGAAGGAGGATTGGGAAGCAGCTGGACAGTTGCTTCATGAAATGGTTGCTGATTCGGGTTGCGCTCTGGATGCTCAAGCATTTAATGGGCTTATATATGTTTGTGCCAAACGGAGGCTTGTTGACTGGGGAACAAAGTGGCTTCATATGATGCTTGAAAGAGATGTGCAGCCGAATGTGTCTACAGTTGGTATGCTTATGGGACTTTACCAGAGGATTGGGAACCTTCCAGAAGCTGAATTCACTTTTGCTAAAATGAGGAAATGTGGCATTAAGTGTGTTAATGCCTACTCAGCTATGGTTACTTTGTATACACGGTTAGGCCATTTTGCCAAATCTGAGGAGGTTATTACTCTAATGAATAATGATGAAGTAGTTCCGAACATGGAAAATTGGTTAGTGCGGCTAAATGCTTATTGTCAACAAGGCAAAATGGAAGAAGCTGAATTGGTATTGAAGTCCTTGGTAGATGAAGGAATTGCTCTGAATGTTGTGGCATACAATACGGTAATTACAGGTTATGGAAAAGTTTCTGACATGCAGAAGGCAATGGAAGTGTTTGATAGGCTTAAGAGTGCAGGTTTAGCTCCTGATGAAACAACCTATAGATCAATGATTGAAGGTTTTGGTAGAGCAGACAAGTACAAACAGGCAATTTTGTACTACAGGAAACTCCGAAACTCTGGATTTAAACCAAATGCATCCAACTTTTACACAATGATTAACTTGCTAGCAAGACATGATGACAGTGAAGGTGCAACAGAGATTCTCGAGGACATGCGGGCAGCAGGCTGCCAGTGTTCATCGATTGTCACTGTTCTTGTCCGAGCATATGGGTCAGTAGGAAGGATGCATAAAGTTCTTCAGATT-CTAAAAGCATGCTTCTATAAGAAGATTTTGTTTGATGCCACCTCATGCTCTATTTTAGTAACAGGATTCGTTCAAAATTCTCTAGTAGAAGAAGCTATGCGTGTTTTGCGCGAAAAGAAGTGGAAAGATTCTGATTTTGAAGACAATTTATATCATATCTTGATCTGTTCTTGCAAAGAGGCTGGCTGTTGTGATGATGCTGTCAGGATATATAATCAGATGCCTAAGTCGGCAACACATCCAAATCTGCGTATTTATTGCAGTATGATTGATGTTTTCAGCATCATGGAGAGATTCACTGATGCTGAAGCTTTATATCTTGAACTGAAAGCATCATCCTGTGTTCTTGACATGATTGCCTACAGCGTAATTGTGAGGATGTATACTAAAGCTGGGCGACCAGAAGATGCCTGTTTGGTTTTGGAAGACATGGAGAAACAAAAGGAAATAGTTCCTGATAAGTACCTTTTCCTTGACATGCTTCGGACTTACCAAAAATGTGGCCTACTCGAGAAATTATCTGATACATATTACTGGATACTAAAGAGTCAAGTTGAATTGGATGAAGCCATGTACAACTGCATTATAAACTGTTGTGGGCGGGCAATACCGGTTGATGAGCTCTCAAGAATTTTTGATGAAATGATTCAACAAGGGCACTTGGCCAACACTGTTACCCTCAATGTATTGCTAGACATATATGGAAAAGCCGGGCTTTTTAATAAGGCAGAAAAGGTATTTCTCATGGCTCGCAAGCAGGGTATGGCAGATATCATATCATACAATACCATTATTGCCGCGCATGCAAAAAATGGGGATTTTCGTAGCATGATTTATTTCGTCCAGAGGATGCAAGAGGCAGGGTTCCCT-GTTTCTCTGGAGGCGTACAACTGT-AT-GCTGGATGCTTACGGTAAGGCAGGA-CAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGCAGGATGCGAGTTTGATCACTATACTTACAACATTATGAT-CAATATATACGGGAGAAAGGGTTGGATCGAAGGAGTT-GCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGATCTGTACAGTTACAACA-CCTTGATAAAAGCATACGGGATAG-CAGGAATGCCTGAAGATGCTGTTAAACTGATGCA-GGAGATGAGGATTAAAGGCA-TTGCCGCTGA-CCGAGTAACCTATACTAACCTTATAGCTGCTCTA-CA-GAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCTCTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTCAGAGTTTTGGTTGCATGCAAATTCTGGCATCCGCACACGTTTATATTTCATCTTTCAGTAGAGTACATACATACATGTGAGTGACATTGTACAGAGAACTATTTCTGATTGTTCTACACATCCTATGGGTACCGGAGATTCAGAAAAACCTCCTACCTTTCCATTCTCTTACAAGATGAAACTCAATCAGTGGATAGCAAGATAGGAACTTTTATCATACCAATCATACAATTGTAATTTTTTTACCAGAACTGGTTTGAACTTCTGATAATAATGATCAAAGATTCAT]
[+] EMBL AK099808 [CCACCGGTCACCCCTGCAGGCCTGCAGCTGCTCCAACGGCTTTCCCCCTCCGTCACCCACTCCCTATCCGCCTATCCCATCCCAAAACCTCCTCTCCCCTCCCCCCCCGGCAGCCGCCGCCTCCAAAGTTCTCTGCTTTCGTCACCGCCAGCCTCCCTCCAAGGTATTGTTCGATCCGGAGTAGTGAGTCTATGCCCTTGTCCGGATCCGAATGGCTGCCCTGCGGATCTGCACGCCGGGTGGTGGTGCTCCGGAGGCCAGAAGAGGCAGTCTTGCTGCTGCCGGGAGCGCGGTTCAGCATGGACCGGATTTGATCGGGTTCAGTTCTTGGGTGCTGCCAATCAGCGCCGGATATGCCGTGGACCGGAGGCACGCAGCAGCTGGTGGAGTTGCCGCATGCCATGGGCTCTCGTGTGCTGACAGTGGGAGGAGGAAGAATCATCCCAGGGCAAGTCTGGTGAATGGTGTGGTTTCATCTCTGGAGGACAGTAGCGGCGGGGAGCCTGCGCTATGCGTATCTGATTCACCTGAAGACGCTAGCTCCAGTGGAAAAGTGTTGTCCGATTTGCGTCGGGACATGGTGGATGGTATTAGTGGTATTCCAAGAATTTCTGCGGGAAAGAAGAAGGGGATGAAGTTCAGGAGAAGAGGGCAGGGTGGAAATAGATTGACACGGCGTAGTGCTCCGAGGCGTGCCAGTGGAAAGAGTGGGCAAGATCAGAGGATTTTGTTGAGCGAGGATGATATTGCTGCAATTTTGTCCAGTGTTACCCATGAATCTAGCATCGAGGAGTGCAATTCTGTTCTCATCTGTCTCGAGAAGTATAGTGATAAGACAGCTCTTGGTTTCTTTGAGTGGATGAAGGCTAATGGAAAGCTGAAGGGAAATGCTGAGGCGTATCACCTAGCGCTTCAAGCGATCGCCTGGAAGGAGGATTGGGAAGCAGCTGGACAGTTGCTTCATGAAATGGTTGCTGATTCGGGTTGCGCTCTGGATGCTCAAGCATTTAATGGGCTTATATATGTTTGTGCCAAACGGAGGCTTGTTGACTGGGGAACAAAGTGGCTTCATATGATGCTTGAAAGAGATGTGCAGCCGAATGTGTCTACAGTTGGTATGCTTATGGGACTTTACCAGAGGATTGGGAACCTTCCAGAAGCTGAATTCACTTTTGCTAAAATGAGGAAATGTGGCATTAAGTGTGTTAATGCCTACTCAGCTATGGTTACTTTGTATACACGGTTAGGCCATTTTGCCAAATCTGAGGAGGTTATTACTCTAATGAATAATGATGAAGTAGTTCCGAACATGGAAAATTGGTTAGTGCGGCTAAATGCTTATTGTCAACAAGGCAAAATGGAAGAAGCTGAATTGGTATTGAAGTCCTTGGTAGATGAAGGAATTGCTCTGAATGTTGTGGCATACAATACGGTAATTACAGGTTATGGAAAAGTTTCTGACATGCAGAAGGCAATGGAAGTGTTTGATAGGCTTAAGAGTGCAGGTTTAGCTCCTGATGAAACAACCTATAGATCAATGATTGAAGGTTTTGGTAGAGCAGACAAGTACAAACAGGCAATTTTGTACTACAGGAAACTCCGAAACTCTGGATTTAAACCAAATGCATCCAACTTTTACACAATGATTAACTTGCTAGCAAGACATGATGACAGTGAAGGTGCAACAGAGATTCTCGAGGACATGCGGGCAGCAGGCTGCCAGTGTTCATCGATTGTCACTGTTCTTGTCCGAGCATATGGGTCAGTAGGAAGGATGCATAAAGTTCTTCAGATT CTAAAAGCATGCTTCTATAAGAAGATTTTGTTTGATGCCACCTCATGCTCTATTTTAGTAACAGGATTCGTTCAAAATTCTCTAGTAGAAGAAGCTATGCGTGTTTTGCGCGAAAAGAAGTGGAAAGATTCTGATTTTGAAGACAATTTATATCATATCTTGATCTGTTCTTGCAAAGAGGCTGGCTGTTGTGATGATGCTGTCAGGATATATAATCAGATGCCTAAGTCGGCAACACATCCAAATCTGCGTATTTATTGCAGTATGATTGATGTTTTCAGCATCATGGAGAGATTCACTGATGCTGAAGCTTTATATCTTGAACTGAAAGCATCATCCTGTGTTCTTGACATGATTGCCTACAGCGTAATTGTGAGGATGTATACTAAAGCTGGGCGACCAGAAGATGCCTGTTTGGTTTTGGAAGACATGGAGAAACAAAAGGAAATAGTTCCTGATAAGTACCTTTTCCTTGACATGCTTCGGACTTACCAAAAATGTGGCCTACTCGAGAAATTATCTGATACATATTACTGGATACTAAAGAGTCAAGTTGAATTGGATGAAGCCATGTACAACTGCATTATAAACTGTTGTGGGCGGGCAATACCGGTTGATGAGCTCTCAAGAATTTTTGATGAAATGATTCAACAAGGGCACTTGGCCAACACTGTTACCCTCAATGTATTGCTAGACATATATGGAAAAGCCGGGCTTTTTAATAAGGCAGAAAAGGTATTTCTCATGGCTCGCAAGCAGGGTATGGCAGATATCATATCATACAATACCATTATTGCCGCGCATGCAAAAAATGGGGATTTTCGTAGCATGATTTATTTCGTCCAGAGGATGCAAGAGGCAGGGTTCCCT GTTTCTCTGGAGGCGTACAACTGT AT GCTGGATGCTTACGGTAAGGCAGGA CAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGCAGGATGCGAGTTTGATCACTATACTTACAACATTATGAT CAATATATACGGGAAAAAGGGTTGGATCGAAGGAGTT GCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGATCTGTACAGTTACAACA CCTTGATAAAAGCATACGGGATAG CAGGAATGCCTGAAGATGCTGTTAAACTGATGCA GGAGATGAGGATTAAAGGCA TTGCCGCTGA CCGAGTAACCTATACTAACCTTATAGCTGCTCTA CA GAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCTCTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTCAGAGTTTTGGTTGCATGCAAATTCTGGCATCCGCACACGTTTATATTTCATCTTTCAGTAGAGTACATACATACATGTGAGTGACATTGTACAGAGAACTATTTCTGATTGTTCTACACATCCTATGGGTACCGGAGATTCAGAAAAACCTCCTACCTTTCCATTCTCTTACAAGATGAAACTCAATCAGTGGATAGCAAGATAGGAACTTTTATCATACCAATCATACAATTGTAATTTTTTTACCAGAACTGGTTTGAACTTCTGATAATAATGATCAAAGATTCAT]
[+] EMBL AK066315 [ CAATTTTGTCCAGTGTTACCCATGAATCTAGCATCGAGGAGTGCAATTCTGTTCTCATCTGTCTCGAGAAGCATAGTGATAAGACAGCTCTTGGTTTCTTTGAGTGGATGAAGGCTAATGGAAAGCTGAAGGGAAATGCTGAGGCGTATCACCTAGCGCTTCAAGCGATCGCCTGGAAGGAGGATTGGGAAGCAGCTGGACAGTTGCTTCATGAAATGGTTGCTGATTCGGGTTGCGCTCTGGATGCTCAAGCATTTAATGGGCTTATATATGTTTGTGCCAAACGGAGGCTTGTTGACTGGGGAACAAAGTGGCTTCATATGATGCTTGAAAGAGATGTGCAGCCGAATGTGTCTACAGTTGGTATGCTTATGGGACTTTACCAGAGGATTGGGAACCTTCCAGAAGCTGAATTCACTTTTGCTAAAATGAGGAAATGTGGCATTAAGTGTGTTAATGCCTACTCAGCTATGGTTACTTTGTATACACGGTTAGGCCATTTTGCCAAATCTGAGGAGGTTATTACTCTAATGAATAATGATGAAGTAGTTCCGAACATGGAAAATTGGTTAGTGCGGCTAAATGCTTATTGTCAACAAGGCAAAATGGAAGAAGCTGAATTGGTATTGAAGTCCTTGGTAGATGAAGGAATTGCTCTGAATGTTGTGGCATACAATACGGTAATTACAGGTTATGGAAAAGTTTCTGACATGCAGAAGGCAATGGAAGTGTTTGATAGGCTTAAGAGTGCAGGTTTAGCTCCTGATGAAACAACCTATAGATCAATGATTGAAGGTTTTGGTAGAGCAGACAAATACAAACAGGCAATTTTGTACTACAGGAAACTCCGAAACTCTGGATTTAAACCAAATGCATCCAACTTTTACACAATGATTAACTTGCTAGCAAGACATGATGACAGTGAAGGTGCAACAGAGATTCTCGAGGACATGCGGGCAGCAGGCTGCCAGTGTTCATCGATTGTCACTGTTCTTGTCCGAGCATATGGGTCAGTAGGAAGGATGCATAAAGTTCTTCAGATTCCAAAAAGCATGCTTCTATAAGAAGATTTTGTTTGATGCCACCTCATGCTCTATTTTAGTAACAGGATTCGTTCAAAATTCTCTAGTAGAAGAAGCTATGCGTGTTTTGCGCGAAAAGAAGTGGAAAGATTCTGATTTTGAAGACAATTTATATCATATCTTGATCTGTTCTTGCAAAGAGGCTGGCTGTTGTGATGATGCTGTCAGGATATATAATCAGATGCCTAAGTCGGCAACACATCCAAATCTGCGTATTTATTGCAGTATGATTGATGTTTTCAGCATCATGGAGAGATTCACTGATGCTGAAGCTTTATATCTTGAACTGAAAGCATCATCCTGTGTTCTTGACATGATTGCCTACAGCGTAATTGTGAGGATGTATACTAAAGCTGGGCGACCAGAAGATGCCTGTTTGGTTTTGGAAGACATGGAGAAACAAAAGGAAATAGTTCCTGATAAGTACCTTTTCCTTGACATGCTTCGGACTTACCAAAAATGTGGCCTACTCGAGAAATTATCTGATACATATTACTGGATACTAAAGAGTCAAGTTGAATTGGATGAAGCCATGTACAACTGCATTATAAACTGTTGTGGGCGGGCAATACCGGTTGATGAGCTCTCAAGAATTTTTGATGAAATGATTCAACAAGGGCATTTGGCCAACACTGTTACCCTCAATGTATTGCTAGACATATATGGAAAAGCCGGGCTTTTTAATAAGGCAGAAAAGGTATTTCTCATGGCTCGCAAGCAGGGTATGGCAGATATCATATCATACAATACCATTATTGCCGCGCATGCAAAAAATGGGGATTTTCGTAGCATGATTTATTTCGTCCAGAGGATGCAAGAGGCAGGGTTCCCT GTTTCTCTGGAGGCGTACAACTGT AT GCTGGATGCTTACGGTAAGGCAGGA CAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGCAGGATGCGAGTTTGATCACTATACTTACAACATTATGAT CAATATATACGGGAGAAAGGGTTGGATCGAAGGAGTT GCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGATCTGTACAGTTACAACA CCTTGATAAAAGCATACGGGATAG CAGGAATGCCTGAAGATGCTGTTAAACTGATGCA GGAGATGAGGATTAAAGGCA TTGCCGCTGA CCGAGTAACCTATACTAACCTTATAGCTGCTCTA CA GAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCTCTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTCAGAGTTTTGGTTGCATGCAAATTCTGGCATCCGCACACGTTTATATTTCATCTTTCAGTAGAGTACATACATACATGTGAGTGACATTGTACAGAGAACTATTTCTGATTGTTCTACACATCCTATGGGTA ]
[+] EMBL AK072601 [ ATGATTTATTTCGTCCAGAGGATGCAAGAGGCAGGGTTCCCT GTTTCTCTGGAGGCGTACAACTGT AT GCTGGATGCTTACGGTAAGGCAGGA CAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGCAGGATGCGAGTTTGATCACTATACTTACAACATTATGAT CAATATATACGGGAGAAAGGGTTGGATCGAAGGAGTT GCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGATCTGTACAGTTACAACA CCTTGATAAAAGCATACGGGATAG CAGGAATGCCTGAAGATGCTGTTAAACTGATGCA GGAGATGAGGATTAAAGGCA TTGCCGCTGA CCGAGTAACCTATACTAACCTTATAGCTGCTCTA CA GAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCTCTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTCAGAGTTTTGGTTGCATGCAAATTCTGGCATCCGCACACGTTTATATTTCATCTTTCAGTAGAGTACATACATACATGTGAGTGACATTGTACAGAGAACTATTTCTGATTGTTCTACACATCCTATGGGTACCGGAGATTCAGAAAAACCTCCTACCTTTCCATTCTCTTACAAGATGAAACTCAATCAGTGGATAGCAAGATAGGAACTTTTATCATACCAATCATACAATTGTAATTTTTTTACCAGAACTGGTTTGAACTTCTGATAATAATGATCAAAGATTCAT]
[+] EMBL BI802315 [ GCAAGAGCCAGGGTTCCCTGGTTTCTCTGGAGGCGTACAACTGTGATGGCTGGATGCTTACGGTAAGCCAGCACCAGTTGGAGGAGTTTGCTGCTGTTCTGCCAAAAATGGAGAGACCAGGATGCGAGTTTGATCACTATACTTACAACATTATGATCCAATATATACGGGAGAAAGGGTTGGATCGAAGGAGTTCGCAAACGTTCTTGCGGAGCTAAAGA CCGTGGTGGCGAGCCAGATCTGTACAGTTACAACACCCTTGATAAAAGCATACGGGATAGCCAGGAATGCCTGAAGATGCTGTTAAACTGATGCACGGAGATGAGGATTAAAGGCACTTCCCCCTGACCCGAGTAACCTATACTAACCTTATAGCTGCTCTACCACGAGGAATGAGAATTTCCTGGAA CAGTTAAGTGGTCTCTCTGGATGAACCCAACTGGAGTT CTCCAACTCGAACATGATG GCCTAAGAATTCAGA TTTT GTTCCACCCAAAa ]
consensusID : consensus_8515#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 579 fasta sequence
[AGAGGAGACAAGGGGGCAAGAGGCAGGGTTCCCTGTTTCTCTGGAGGCGTACAACTGTATGCTGGATGCTTACGGTAAGGCAGGACAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGTAGGATGCGAGTTTGATCACTATACTTACAACATTATGATCAATATATACGGGAGAAAGGGTTGGATCGAAGGAGTTGCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGATCTGTACAGTTACAACACCTTGATAAAAGCATACGGGATAGCAGGAATGCCTGAAGATGCTGTTAAACTGATGCAGGAGATGAGGATTAAAGGCATTGCCGCTGACCGAGTAACCTATACTAACCTTATAGCTGCTCTACAGAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCTCTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTTAGAGTTTTGGTTGCATGCAAATTCTGGCTGGATTTTTCACATTTTGGTCTTTTTGAAAAACTTATTTCGCAAGTAGACTCTTAGAAAAAAAAAAA]
[-] EMBL CA762652 [AGAGGAGACAAGGGGGCAAGAGGCAGGGTTCCCTGTTTCTCTGGAGGCGTACAACTGTATGCTGGATGCTTACGGTAAGGCAGGACAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGTAGGATGCGAGTTTGATCACTATACTTACAACATTATGATCAATATATACGGGAGAAAGGGTTGGATCGAAGGAGTTGCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGATCTGTACAGTTACAACACCTTGATAAAAGCATACGGGATAGCAGGAATGCCTGAAGATGCTGTTAAACTGATGCAGGAGATGAGGATTAAAGGCATTGCCGCTGACCGAGTAACCTATACTAACCTTATAGCTGCTCTACAGAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCTCTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTTAGAGTTTTGGTTGCATGCAAATTCTGGCTGGATTTTTCACATTTTGGTCTTTTTGAAAAACTTATTTCGCAAGTAGACTCTTAGAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8515#0 CCACCGGTCACCCCTGCAGGCCTGCAGCTGCTCCAACGGCTTTCCCCCTCCGTCACCCAC 60
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TCCCTATCCGCCTATCCCATCCCAAAACCTCCTCTCCCCTCCCCCCCCGGCAGCCGCCGC 120
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 CTCCAAAGTTCTCTGCTTTCGTCACCGCCAGCCTCCCTCCAAGGTATTGTTCGATCCGGA 180
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 GTAGTGAGTCTATGCCCTTGTCCGGATCCGAATGGCTGCCCTGCGGATCTGCACGCCGGG 240
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TGGTGGTGCTCCGGAGGCCAGAAGAGGCAGTCTTGCTGCTGCCGGGAGCGCGGTTCAGCA 300
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TGGACCGGATTTGATCGGGTTCAGTTCTTGGGTGCTGCCAATCAGCGCCGGATATGCCGT 360
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 GGACCGGAGGCACGCAGCAGCTGGTGGAGTTGCCGCATGCCATGGGCTCTCGTGTGCTGA 420
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 CAGTGGGAGGAGGAAGAATCATCCCAGGGCAAGTCTGGTGAATGGTGTGGTTTCATCTCT 480
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 GGAGGACAGTAGCGGCGGGGAGCCTGCGCTATGCGTATCTGATTCACCTGAAGACGCTAG 540
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 CTCCAGTGGAAAAGTGTTGTCCGATTTGCGTCGGGACATGGTGGATGGTATTAGTGGTAT 600
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TCCAAGAATTTCTGCGGGAAAGAAGAAGGGGATGAAGTTCAGGAGAAGAGGGCAGGGTGG 660
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 AAATAGATTGACACGGCGTAGTGCTCCGAGGCGTGCCAGTGGAAAGAGTGGGCAAGATCA 720
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 GAGGATTTTGTTGAGCGAGGATGATATTGCTGCAATTTTGTCCAGTGTTACCCATGAATC 780
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TAGCATCGAGGAGTGCAATTCTGTTCTCATCTGTCTCGAGAAGTATAGTGATAAGACAGC 840
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TCTTGGTTTCTTTGAGTGGATGAAGGCTAATGGAAAGCTGAAGGGAAATGCTGAGGCGTA 900
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TCACCTAGCGCTTCAAGCGATCGCCTGGAAGGAGGATTGGGAAGCAGCTGGACAGTTGCT 960
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TCATGAAATGGTTGCTGATTCGGGTTGCGCTCTGGATGCTCAAGCATTTAATGGGCTTAT 1020
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 ATATGTTTGTGCCAAACGGAGGCTTGTTGACTGGGGAACAAAGTGGCTTCATATGATGCT 1080
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TGAAAGAGATGTGCAGCCGAATGTGTCTACAGTTGGTATGCTTATGGGACTTTACCAGAG 1140
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 GATTGGGAACCTTCCAGAAGCTGAATTCACTTTTGCTAAAATGAGGAAATGTGGCATTAA 1200
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 GTGTGTTAATGCCTACTCAGCTATGGTTACTTTGTATACACGGTTAGGCCATTTTGCCAA 1260
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 ATCTGAGGAGGTTATTACTCTAATGAATAATGATGAAGTAGTTCCGAACATGGAAAATTG 1320
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 GTTAGTGCGGCTAAATGCTTATTGTCAACAAGGCAAAATGGAAGAAGCTGAATTGGTATT 1380
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 GAAGTCCTTGGTAGATGAAGGAATTGCTCTGAATGTTGTGGCATACAATACGGTAATTAC 1440
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 AGGTTATGGAAAAGTTTCTGACATGCAGAAGGCAATGGAAGTGTTTGATAGGCTTAAGAG 1500
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TGCAGGTTTAGCTCCTGATGAAACAACCTATAGATCAATGATTGAAGGTTTTGGTAGAGC 1560
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 AGACAAGTACAAACAGGCAATTTTGTACTACAGGAAACTCCGAAACTCTGGATTTAAACC 1620
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 AAATGCATCCAACTTTTACACAATGATTAACTTGCTAGCAAGACATGATGACAGTGAAGG 1680
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TGCAACAGAGATTCTCGAGGACATGCGGGCAGCAGGCTGCCAGTGTTCATCGATTGTCAC 1740
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TGTTCTTGTCCGAGCATATGGGTCAGTAGGAAGGATGCATAAAGTTCTTCAGATTCTAAA 1800
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 AGCATGCTTCTATAAGAAGATTTTGTTTGATGCCACCTCATGCTCTATTTTAGTAACAGG 1860
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 ATTCGTTCAAAATTCTCTAGTAGAAGAAGCTATGCGTGTTTTGCGCGAAAAGAAGTGGAA 1920
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 AGATTCTGATTTTGAAGACAATTTATATCATATCTTGATCTGTTCTTGCAAAGAGGCTGG 1980
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 CTGTTGTGATGATGCTGTCAGGATATATAATCAGATGCCTAAGTCGGCAACACATCCAAA 2040
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TCTGCGTATTTATTGCAGTATGATTGATGTTTTCAGCATCATGGAGAGATTCACTGATGC 2100
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TGAAGCTTTATATCTTGAACTGAAAGCATCATCCTGTGTTCTTGACATGATTGCCTACAG 2160
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 CGTAATTGTGAGGATGTATACTAAAGCTGGGCGACCAGAAGATGCCTGTTTGGTTTTGGA 2220
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 AGACATGGAGAAACAAAAGGAAATAGTTCCTGATAAGTACCTTTTCCTTGACATGCTTCG 2280
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 GACTTACCAAAAATGTGGCCTACTCGAGAAATTATCTGATACATATTACTGGATACTAAA 2340
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 GAGTCAAGTTGAATTGGATGAAGCCATGTACAACTGCATTATAAACTGTTGTGGGCGGGC 2400
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 AATACCGGTTGATGAGCTCTCAAGAATTTTTGATGAAATGATTCAACAAGGGCACTTGGC 2460
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 CAACACTGTTACCCTCAATGTATTGCTAGACATATATGGAAAAGCCGGGCTTTTTAATAA 2520
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 GGCAGAAAAGGTATTTCTCATGGCTCGCAAGCAGGGTATGGCAGATATCATATCATACAA 2580
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 TACCATTATTGCCGCGCATGCAAAAAATGGGGATTTTCGTAGCATGATTTATTTCGTCCA 2640
consensus_8515#1 --------------------------------------------------AGAGGAGACA 10
* **
consensus_8515#0 GAGGATGCAAGAGGCAGGGTTCCCTGTTTCTCTGGAGGCGTACAACTGTATGCTGGATGC 2700
consensus_8515#1 AGGGG-GCAAGAGGCAGGGTTCCCTGTTTCTCTGGAGGCGTACAACTGTATGCTGGATGC 69
** ******************************************************
consensus_8515#0 TTACGGTAAGGCAGGACAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGC 2760
consensus_8515#1 TTACGGTAAGGCAGGACAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGT 129
***********************************************************
consensus_8515#0 AGGATGCGAGTTTGATCACTATACTTACAACATTATGATCAATATATACGGGAGAAAGGG 2820
consensus_8515#1 AGGATGCGAGTTTGATCACTATACTTACAACATTATGATCAATATATACGGGAGAAAGGG 189
************************************************************
consensus_8515#0 TTGGATCGAAGGAGTTGCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGA 2880
consensus_8515#1 TTGGATCGAAGGAGTTGCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGA 249
************************************************************
consensus_8515#0 TCTGTACAGTTACAACACCTTGATAAAAGCATACGGGATAGCAGGAATGCCTGAAGATGC 2940
consensus_8515#1 TCTGTACAGTTACAACACCTTGATAAAAGCATACGGGATAGCAGGAATGCCTGAAGATGC 309
************************************************************
consensus_8515#0 TGTTAAACTGATGCAGGAGATGAGGATTAAAGGCATTGCCGCTGACCGAGTAACCTATAC 3000
consensus_8515#1 TGTTAAACTGATGCAGGAGATGAGGATTAAAGGCATTGCCGCTGACCGAGTAACCTATAC 369
************************************************************
consensus_8515#0 TAACCTTATAGCTGCTCTACAGAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCT 3060
consensus_8515#1 TAACCTTATAGCTGCTCTACAGAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCT 429
************************************************************
consensus_8515#0 CTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTCAGAGT 3120
consensus_8515#1 CTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTTAGAGT 489
****************************************************** *****
consensus_8515#0 TTTGGTTGCATGCAAATTCTGGCATCCGCACACGTTTATATTTCATCTTTCAGTAGAGTA 3180
consensus_8515#1 TTTGGTTGCATGCAAATTCTGGC---TGGATTT-TTCACATTTTGGTCTTTT-TGAAAAA 544
*********************** * * ** * **** ** * * *
consensus_8515#0 CATACATACATGTGAGTGACATTGTACAGAGAACTATTTCTGATTGTTCTACACATCCTA 3240
consensus_8515#1 CTTATTT---CGCAAGTAGACTCTTAGAAAAAAAAAAA---------------------- 579
* ** * * *** * ** * * ** *
consensus_8515#0 TGGGTACCGGAGATTCAGAAAAACCTCCTACCTTTCCATTCTCTTACAAGATGAAACTCA 3300
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 ATCAGTGGATAGCAAGATAGGAACTTTTATCATACCAATCATACAATTGTAATTTTTTTA 3360
consensus_8515#1 ------------------------------------------------------------
consensus_8515#0 CCAGAACTGGTTTGAACTTCTGATAATAATGATCAAAGATTCAT 3404
consensus_8515#1 --------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||