Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8526 cluster # 8526       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8526#0 length = 618 sequences # 5  

consensusID : consensus_8526#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 618
fasta sequence
                              [GAGGCCCCAAGGAACAGCCACCCCCAATCTTCTGGTGCCGGCGATGAGTTCTTGGTCGTCCACAATGGCATCATCACAAACTACGAGCTGGGGAATCCACATGCATTATTGCAACTATGGTGGATTTATGCTATTGGCCAACATGTTATCTTCCAAGCCCTGCACATGGGCTGTCTCCAATCTCCATAGACGCCTCACTATTGTTGTTAAATAATCTGCCGTTTAGTTGAAAGCTCATATGCTTTTACTGGAATAAAATAACTGCTGTAGATTAACTAGCAACTAGAATATCAGTGAGTTCTATCTCATTTTGCTAGATTATTGTCGTTGTAATGCAGAGAATATTATCTTATAGAAGTGGCAAATGACAATATACTGAATTCACAATAAGTTTATTAGACATTTATGAATCAGCCAACCATCTCAAACTTGGTTTCATGATCATGTGTAACCTCATGATACCATCTCAAATTAATGTAGCAAGAGATGATAATGATGTAAACAGATAAATTTCCATCATAACTTGGTATTTCTGATGTATCTGCTCAGGTTCTGAAAGAGACACTAATCCGGCACGGGTTCACCTTTGAGTCTGATACTGACACAGAAGTCATCCCT]

[+] EMBL CF304348             [GAGGCCCCAAGGAACAGCCACCCCCAATCTTCTGGTGCCGGCGATGAGTTCTTGGTCGTCCACAATGGCATCATCACAAACTACGAGCTGGGGAATCCACATGCATTATTGCAACTATGGTGGATTTATGCTATTGGCCAACATGTTATCTTCCAAGCCCTGCACATGGGCTGTCTCCAATCTCCATAGATTTTTTACTATTGTTGTTAAATAATCTGCCGTTTAGTTGAAAGCTCATATGCTTTTACTGGAATAAAATAACTGCTGTAGATTAACTAGCAACTAGAATATCAGTGAGTTCTATCTCATTTTGCTAGATTATTGTCGTTGTAATGCAGAGAATATTATCTTATAGAAGTGGCAAATGACAATATACTGAATTCACAATAAGTTTATTAGACATTTATGAATCAGCCAACCATCTCAAACTTGGTTTCATGATCATGTGTAACCTCATGATACCATCTCAAATTAATGTAGCAAGAGATGATAATGATGTAAACAGATAAATTTCCATCATAACTTGGTATTTCTGATGTATCTGCTCAGGTTCTGAAAGAGACACTAATCCGGCACGGGTTCACCTTTGAGTCTGATACTGACACAGAAGTCATCCCT]
[+] EMBL CF303268             [    CCCCAAGGAACAGCCACCCCCAATCTTCTGGTGCCGGCGATGAGTTCTTGGTCGTCCACAATGGCATCATCACAAACTACGAGCTGGGGAATCCACATGCATTATTGCAACTATGGTGGATTTATGCTATTGGCCAACATGTTATCTTCCAAGCCCTGCACATGGGCTGTCTCCAATCTCCATAGACGCCTCACTATTGTTGTTAAATAATCTGCCGTTTAGTTGAAAGCTCATATGCTTTTACTGGAATAAAATAACTGCTGTAGATTAACTAGCAACTAGAATATCAGTGAGTTCTATCTCATTTTGCTAGATTATTGTCGTTGTAATGCAGAGAATATTATCTTATAGAAGTGGCAAATGACAATATACTGAATTCACAATAAGTTTATTAGACATTTATGAATCAGCCAACCATCTCAAACTTGGTTTCATGATCATGTGTAACCTCATG                                                                                                                                                                ]
[+] EMBL CF303585             [      CCAAGGAACAGCCACCCCCAATCTTCTGGTGCCGGCGATGAGTTCTTGGTCGTCCACAATGGCATCATCACAAACTACGAGCTGGGGAATCCACATGCATTATTGCAACTATGGTGGATTTATGCTATTGGCCAACATGTTATCTTCCAAGCCCTGCACATGGGCTGTCTCCAATCTCCATAGACGCCTCACTATTGTTGTTAAATAATCTGCCGTTTAGTTGAAAGCTCATATGCTTTTACTGGAATAAAATAACTGCTGTAGATTAACTAGCAACTAGAATATCAGTGAGTTCTATCTCATTTTGCTAGATTATTGTCGTTGTAATGCAGAGAATATTATCTTATAGAAGTGGCAAATGACAATATACTGAATTCACAATAAGTTTATTAGACATTTATGAATCAGCCAACCATCTCAAACTTGGTTTCATGATCATGTGTAACCTCATGATACCATCTCAAATTAATGTAGCAAGAGATGATAATGATGTAAACAGATAAATTTCCATCATAACTTGGTATTTCTGATGTATCTGCTCAGGTTCTGAAAGAGACACTAATCCGGCACGGGTTCACCTTTGAGTCT                        ]
[+] EMBL CF303698             [      CCAAGGAACAGCCACCCCCAATCTTCTGGTGCCGGCGATGAGTTCTTGGTCGTCCACAATGGCATCATCACAAACTACGAGCTGGGGAATCCACATGCATTATTGCAACTATGGTGGATTTATGCTATTGGCCAACATGTTATCTTCCAAGCCCTGCACATGGGCTGTCTCCAATCTCCATAGACGCCTCACTATTGTTGTTAAATAATCTGCCGTTTAGTTGAAAGCTCATATGCTTTTACTGGAATAAAATAACTGCTGTAGATTAACTAGCAACTAGAATATCAGTGAGTTCTATCTCATTTTGCTAGATTATTGTCGTTGTAATGCAGAGAATATTATCTTATAGAAGTGGCAAATGACAATATACTGAATTCACAATAAGTTTATTAGACATTTATGAATCAGCCAACCATCTCAAACTTGGTTTCATGATCATGTGTAACCTCATGATACCATCTCAAATTAATGTAGCAAGAGATGATAATGATGTAAACAGATAAATTTCCATCATAACTTGGTATTTCTGATGTATCTGCTCAGGTTCTG AAGAGACACTAATCCGGCACGGGTTCACCTTTGAGTC                         ]
[+] EMBL CF302996             [       CAAGGAACAGCCACCCCCAATCTTCTGGTGCCGGCGATGAGTTCTTGGTCGTCC CAATGGCATCATCACAAACTACGAGCTGGGGAATCCACATGCATTATTGCAACTATGGTGGATTTATGCTATTGGCCAACATGTTATCTTCCAAGCCCTGCACATGGGCTGTCTCCAATCTCCATAGACGCCTCACTATTGTTGTTAAATAATCTGCCGTTTAGTTGAAAGCTCATATGCTTTTACTGGAATAAAATAACTGCTGTAGATTAACTAGCAACTAGAATATCAGTGAGTTCTATCTCATTTTGCTAGATTATTGTCGTTGTAATGCAGAGAATATTATCTTATAGAAGTGGCAAATGACAATATACTGAATTCACAATAAGTTTATTAGACATTTATGAATCAGCCAACCATCTCAAACTTGGTTTCATGATCATGTGTAACCTCATG                                                                                                                                                                ]


>consensus_8526#0 GAGGCCCCAAGGAACAGCCACCCCCAATCTTCTGGTGCCGGCGATGAGTTCTTGGTCGTC CACAATGGCATCATCACAAACTACGAGCTGGGGAATCCACATGCATTATTGCAACTATGG TGGATTTATGCTATTGGCCAACATGTTATCTTCCAAGCCCTGCACATGGGCTGTCTCCAA TCTCCATAGACGCCTCACTATTGTTGTTAAATAATCTGCCGTTTAGTTGAAAGCTCATAT GCTTTTACTGGAATAAAATAACTGCTGTAGATTAACTAGCAACTAGAATATCAGTGAGTT CTATCTCATTTTGCTAGATTATTGTCGTTGTAATGCAGAGAATATTATCTTATAGAAGTG GCAAATGACAATATACTGAATTCACAATAAGTTTATTAGACATTTATGAATCAGCCAACC ATCTCAAACTTGGTTTCATGATCATGTGTAACCTCATGATACCATCTCAAATTAATGTAG CAAGAGATGATAATGATGTAAACAGATAAATTTCCATCATAACTTGGTATTTCTGATGTA TCTGCTCAGGTTCTGAAAGAGACACTAATCCGGCACGGGTTCACCTTTGAGTCTGATACT GACACAGAAGTCATCCCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)