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Oryza sativa
cluster # 8537 cluster # 8537       Sequences # 5       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8537#0 length = 3161 sequences # 4  
 consensus_8537#1 length = 505 sequences # 1  
consensusID : consensus_8537#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 3161
fasta sequence 
                              [AGCAAAAGGCCACACTCCTCACAAATCTCGTGCGCGCCACCGTCATCTCCGGCGACCACCTCACCGCCGGCCATGCCATTCTCCTACGCCGCCGCGGCCTCTGGCTCCGCGTCCTCTTCTCGCAAGCCGGTTCCCGTCGCCGCGGCCGCCGCCCGCCGACCCGCGCCCTCGCCGGCAGCGGCGGCGGCACCCGCGCCCTCGCCGTCAAACCCTAGCGCGGTCTCCGATTCCGACCCCTCCTCGTACTCCTCCTCCGGGGAGGAGACCGACCTCACCGCCTCCGATCCGGCGGCCGCCTCCGTCATCTCCTCCTACCTCTCCGTTGCGGGGGATGGCGCCGACCTCTCCAAGGTCGGGATCTTCCTCAGCTCCGCGGCGCGCCGCCGATCGCCGCCGTGCCTGATATGCTTCGATCCCATCCGCCCCTCCGACCCCGTCTGGTCCTGCTCCGCCTCCTGCTTCGCCCTCCTCCACCTCCACTGCATCCAGTCATGGGCACATCAGTCATCCTCTGCCGCGCCTTCTCCCACCTGGGGTTGCCCCAAATGCCGCTTCCCCTATCCCAAATCCCAGACTCCCACCTCCTACCTCTGCTTCTGCTCCAAGACGGTAGACCCAGCTCCGGACCCCTGGATCCTCCCCCACTCCTGCGGCGACGTCTGTGGCCGACGTCTCAATGCAGACCGTGACTCTGGCTGTGAGCACAACTGCCTCCTGCTTTGCCACCCTGGGCCATGTCCACCGTGCCCGGCAATTGTTCCAAATGCTATGTGCTTTTGCGGCTCACATCGTGAGACGCGTCGATGCTCACATCAGCGTTATTCTTGCTCGGGGAAATGCAATAAACGCCTCGGCTGTGGAATCCACCGGTGTCCTGTGGATTGCCATGATGGGCCTTGCCCGCCTTGTGCGGTGCGAGGAAAGCACAAATGTGAGTGTGGAGAAACAATGGAGGAGAGGCTATGCTCTGAAAGGGTGTTCCAGTGCAAGAGGGAGTGTGGTGGGATGTTGCAGTGTGGGAAGCATAGTTGTGAGAGGGGTTGCCATGCTGGAAAGTGTGGAGGATGCCCACTCCAAGGGCGACGAACTTGCCCATGTGGGAAGAAAGATTATCCAAGTTTGGACTGTGATGCAGAGGCTGCCACATGTGGATCAACTTGCGAGAAGGTGCTTGGGTGCGGGCGGCACAAATGCCCAGAGCGGTGTCATCGTGGTTCATGCGTTGAGACATGTCGGCTTGTGATCACAAAATCGTGCCGCTGTGGGGGTCTCAAGAAGGAGGTGCCTTGCTACCAAGAATTGACATGCGAAAGGAAGTGTCAGCGTTTGCGAAACTGTGGCCGCCATGCTTGTAGACGACGTTGCTGCGAGGGTGATTGTGCACCCTGCCCAGAGGTTTGTGACAAGAGGCTCAGATGTGGCAACCATAAATGCCTATCTCCATGCCACAGAGGTGCTTGTGCACCTTGTCCTTTGATGAAGACCATTTCATGCAACTGTGGGCAAACATTTTTTGAGGTGCCCTGTGGGACTGAGAAGAATCAGAAGCCACCCAAATGCTCAAAAAAATGCAATATAGCTCGCCTTTGCAGGCACAAACTTGAATGCCGGCCCCACAAGTGCCACTATGGAGCTTGCCCACCTTGCAAACTAATCTGCGGAGAAGAACTTTCTTGTGGCCACAGGTGTAAGCTGAGGTGTCATGGCCCCATTGCTCCTCCAAATCCTGAGTTCACACTGAAACCAATAAAAAGGAAAAAGGGAAAGCATATAGACTCTACACCTGGAACACCATGCCCGCCATGCCAAGAAGTTGTTTTGGTGCCATGCTTTGGACATCATCTTGGCCAAGAACGTGCAATACTTTGCTCCAAAAGGAGGCAGTTTCCATGTCAGAATTTATGTGGTAACCCTCTCAACTGTGGCAATCATTATTGTACGAAGGCTTGCCATGTGTTACAGATTCCATTGAGTCAGCCTGAAGGAGATCAATCGGCTATACTGTCTCTTGCTAGTGCAAGTGCATTCGCTGAGCCTTGCGAAGAATGTAACCTGCCTTGTCAAAGGGTCAGGGAGCCTCCATGTTCACATCCCTGCCCTTTGCCATGCCATCTTAACGATTGTCCACCTTGCAAAGCCCTTGTTAAAAGACCATGTCATTGTGGTGCTATGGTACACGCTTTTGAGTGCATGTATTATAACAACTTAAATGCTACAAAACAGCAGAAAGTAAGGTCCTGTGGTGGCCCATGTCATAGAAAATTACCGAATTGTCCCCATCTGTGCTCAGAAATATGTCACCCTGGTCAGTGCCCATCAGTTGATCAGTGCATGAAAAAGGTCAATGTCCGTTGTGCATGCAACAACCTTAAAAAAGAGTGGATATGTCAAGATGTTCTGAAGGAATACCGTCAGTCTGGTCGTGACCCAAAACAAATACCTAAAAATCAATATGCAGTTGGCCTACTTGCCTGTGGTGAAGATTGTGTTAAAAAGGTTAAAGCTGCAGATTCTGAGTTGCATCTCCGGAAAATTCAGGAGATCAAGACCCCTGCTGTGGAAGTTGAAAATGTGCCCAAGCGCAGGAAGAGGCGTAACCGTGGCCAAGAAAGTGTTGAAAGCTCAAAATTCCAGGAAATCAAAGCTGTTGCGTTGAAATTTCTCCTGGTTATTTTTCTGTGCATAATCGTTGTAGCTGGATTGTACCTTTTGTGGAAAGGTGTTTACCGGCTTTCTGATTGGATGAATGACATGGAGGAGCAGAGGGCCAGGCAGAGGCATTTGAAGCCTGGAAGATTGTAAATTAAAGACTACGGAGGGTGTTTGTGGAATATTCACAACTGAGATGTGCATCGGTTCACCGTCAGGGATTGGTTTCGGATATATGGTAGTGAAAGATGTCATCATTTTGTTATTGGAGCCAAGCCCCGGAGTTTGTAACTAGTTTGGTCTCTTGTCCGAAGCTACTGGTTAATGGAAACTAAAGTTATCCGTGTCAAAAGAAAGATATCATTTTGTTCTTTGTTTGCCAAACAAAATGTAGGAACTCAACAACCTTGTACTGTAGTTTACATGCATACTGTGTTCGAGTGAATTAAGGGTGTGTTTAGTTCACGTCAAAATTAGAAGTTTCATTGAAATTGAAACGATGTGATGGAAAA]

[+] EMBL AK066765             [AGCAAAAGGCCACACTCCTCACAAATCTCGTGCGCGCCACCGTCATCTCCGGCGACCACCTCACCGCCGGCCATGCCATTCTCCTACGCCGCCGCGGCCTCTGGCTCCGCGTCCTCTTCTCGCAAGCCGGTTCCCGTCGCCGCGGCCGCCGCCCGCCGACCCGCGCCCTCGCCGGCAGCGGCGGCGGCACCCGCGCCCTCGCCGTCAAACCCTAGCGCGGTCTCCGATTCCGACCCCTCCTCGTACTCCTCCTCCGGGGAGGAGACCGACCTCACCGCCTCCGATCCGGCGGCCGCCTCCGTCATCTCCTCCTACCTCTCCGTTGCGGGGGATGGCGCCGACCTCTCCAAGGTCGGGATCTTCCTCAGCTCCGCGGCGCGCCGCCGATCGCCGCCGTGCCTGATATGCTTCGATCCCATCCGCCCCTCCGACCCCGTCTGGTCCTGCTCCGCCTCCTGCTTCGCCCTCCTCCACCTCCACTGCATCCAGTCATGGGCACATCAGTCATCCTCTGCCGCGCCTTCTCCCACCTGGGGTTGCCCCAAATGCCGCTTCCCCTATCCCAAATCCCAGACTCCCACCTCCTACCTCTGCTTCTGCTCCAAGACGGTAGACCCAGCTCCGGACCCCTGGATCCTCCCCCACTCCTGCGGCGACGTCTGTGGCCGACGTCTCAATGCAGACCGTGACTCTGGCTGTGAGCACAACTGCCTCCTGCTTTGCCACCCTGGGCCATGTCCACCGTGCCCGGCAATTGTTCCAAATGCTATGTGCTTTTGCGGCTCACATCGTGAGACGCGTCGATGCTCACATCAGCGTTATTCTTGCTCGGGGAAATGCAATAAACGCCTCGGCTGTGGAATCCACCGGTGTCCTGTGGATTGCCATGATGGGCCTTGCCCGCCTTGTGCGGTGCGAGGAAAGCACAAATGTGAGTGTGGAGAAACAATGGAGGAGAGGCTATGCTCTGAAAGGGTGTTCCAGTGCAAGAGGGAGTGTGGTGGGATGTTGCAGTGTGGGAAGCATAGTTGTGAGAGGGGTTGCCATGCTGGAAAGTGTGGAGGATGCCCACTCCAAGGGCGACGAACTTGCCCATGTGGGAAGAAAGATTATCCAAGTTTGGACTGTGATGCAGAGGCTGCCACATGTGGATCAACTTGCGAGAAGGTGCTTGGGTGCGGGCGGCACAAATGCCCAGAGCGGTGTCATCGTGGTTCATGCGTTGAGACATGTCGGCTTGTGATCACAAAATCGTGCCGCTGTGGGGGTCTCAAGAAGGAGGTGCCTTGCTACCAAGAATTGACATGCGAAAGGAAGTGTCAGCGTTTGCGAAACTGTGGCCGCCATGCTTGTAGACGACGTTGCTGCGAGGGTGATTGTGCACCCTGCCCAGAGGTTTGTGACAAGAGGCTCAGATGTGGCAACCATAAATGCCTATCTCCATGCCACAGAGGTGCTTGTGCACCTTGTCCTTTGATGAAGACCATTTCATGCAACTGTGGGCAAACATTTTTTGAGGTGCCCTGTGGGACTGAGAAGAATCAGAAGCCACCCAAATGCTCAAAAAAATGCAATATAGCTCGCCTTTGCAGGCACAAACTTGAATGCCGGCCCCACAAGTGCCACTATGGAGCTTGCCCACCTTGCAAACTAATCTGCGGAGAAGAACTTTCTTGTGGCCACAGGTGTAAGCTGAGGTGTCATGGCCCCATTGCTCCTCCAAATCCTGAGTTCACACTGAAACCAATAAAAAGGAAAAAGGGAAAGCATATAGACTCTACACCTGGAACACCATGCCCGCCATGCCAAGAAGTTGTTTTGGTGCCATGCTTTGGACATCATCTTGGCCAAGAACGTGCAATACTTTGCTCCAAAAGGAGGCAGTTTCCATGTCAGAATTTATGTGGTAACCCTCTCAACTGTGGCAATCATTATTGTACGAAGGCTTGCCATGTGTTACAGATTCCATTGAGTCAGCCTGAAGGAGATCAATCGGCTATACTGTCTCTTGCTAGTGCAAGTGCATTCGCTGAGCCTTGCGAAGAATGTAACCTGCCTTGTCAAAGGGTCAGGGAGCCTCCATGTTCACATCCCTGCCCTTTGCCATGCCATCTTAACGATTGTCCACCTTGCAAAGCCCTTGTTAAAAGACCATGTCATTGTGGTGCTATGGTACACGCTTTTGAGTGCATGTATTATAACAACTTAAATGCTACAAAACAGCAGAAAGTAAGGTCCTGTGGTGGCCCATGTCATAGAAAATTACCGAATTGTCCCCATCTGTGCTCAGAAATATGTCACCCTGGTCAGTGCCCATCAGTTGATCAGTGCATGAAAAAGGTCAATGTCCGTTGTGCATGCAACAACCTTAAAAAAGAGTGGATATGTCAAGATGTTCTGAAGGAATACCGTCAGTCTGGTCGTGACCCAAAACAAATACCTAAAAATCAATATGCAGTTGGCCTACTTGCCTGTGGTGAAGATTGTGTTAAAAAGGTTAAAGCTGCAGATTCTGAGTTGCATCTCCGGAAAATTCAGGAGATCAAGACCCCTGCTGTGGAAGTTGAAAATGTGCCCAAGCGCAGGAAGAGGCGTAACCGTGGCCAAGAAAGTGTTGAAAGCTCAAAATTCCAGGAAATCAAAGCTGTTGCGTTGAAATTTCTCCTGGTTATTTTTCTGTGCATAATCGTTGTAGCTGGATTGTACCTTTTGTGGAAAGGTGTTTACCGGCTTTCTGATTGGATGAATGACATGGAGGAGCAGAGGGCCAGGCAGAGGCATTTGAAGCCTGGAAGATTGTAAATTAAAGACTACGGAGGGTGTTTGTGGAATATTCACAACTGAGATGTGCATCGGTTCACCGTCAGGGATTGGTTTCGGATATATGGTAGTGAAAGATGTCATCATTTTGTTATTGGAGCCAAGCCCCGGAGTTTGTAACTAGTTTGGTCTCTTGTCCGAAGCTACTGGTTAATGGAAACTAAAGTTATCCGTGTCAAAAGAAAGATATCATTTTGTTCTTTGTTTGCCAAACAAAATGTAGGAACTCAACAACCTTGTACTGTAGTTTACATGCATACTGTGTTCGAGTGAATTAAGGGTGTGTTTAGTTCACGTCAAAATTAGAAGTTTCATTGAAATTGAAACGATGTGATGGAAAA]
[+] EMBL CB673792             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCGTTTGCCATACTGTGGCCGCCATGCTTGTAGACGACGTTGCTGCGAGGGTGATTGTGCACCCTGCCCAGAGGTTTGTGACAAGAGGCTCAGATGTGGCAACCATAAATGCCTATCTCCATGCCACAGAGGTGCTTGTGCACCTTGTCCTTTGATGAAGACCATTTCATGCAACTGTGGGCAAACATTTTTTGAGGTGCCCTGTGGGACTGAGAAGAATCAGAAGCCACCCAAATGCTCAAAAAAATGCAATATAGCTCGCCTTTGCAGGCACAAACTTGAATGCCGGCCCCACAAGTGCCACTATGGAGCTTGCCCACCTTGCAAACTAATCTGCGGAGAAGAACTTTCTTGTGGCCACAGGTGTAAGCTGAGGTGTCATGGCCCCATTGCTCCTCCAAATCCTGAGTTCACACTGAAACCAATAAAAAGGAAAAAGGGAAAGCATATAGACTCTACACCTGGAACACCATGCCCGCCATGCCAAGAAGTTGTTTTGGTGCCATGCTTTGGACATCATCTTGGCCAAGAACGTGCAATACTTTGCTCCAAAAGGAGGCAGTTTCCATGTCAGAATTTATGTGGTAACCCTCTCAACTGTGGCAATCATTATTGTACGAAGGCTTGCCATGTGTTACAGATTCCATTGAGTCAGCCTGAAGGAGATCAATCGGCTATACTGTCTCTTGCTAGTGCAAGTGCATTCGCTGAGCCTTGCGAAGAATGTAACCTGCCTTGTCAAAGGGTCAGGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK059497             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAAGCATATAGACTCTACACCTGGAACACCATGCCCGCCATGCCAAGAAGTTGTTTTGGTGCCATGCTTTGGACATCATCTTGGCCAAGAACGTGCAATACTTTGCTCCAAAAGGAGGCAGTTTCCATGTCAGAATTTATGTGGTAACCCTCTCAACTGTGGCAATCATTATTGTACGAAGGCTTGCCATGTGTTACAGATTCCATTGAGTCAGCCTGAAGGAGATCAATCGGCTATACTGTCTCTTGCTAGTGCAAGTGCATTCGCTGAGCCTTGCGAAGAATGTAACCTGCCTTGTCAAAGGGTCAGGGAGCCTCCATGTTCACATCCCTGCCCTTTGCCATGCCATCTTAACGATTGTCCACCTTGCAAAGCCCTTGTTAAAAGACCATGTCATTGTGGTGCTATGGTACACGCTTTTGAGTGCATGTATTATAACAACTTAAATGCTACAAAACAGCAGAAAGTAAGGTCCTGTGGTGGCCCATGTCATAGAAAATTACCGAATTGTCCCCATCTGTGCTCAGAAATATGTCACCCTGGTCAGTGCCCATCAGTTGATCAGTGCATGAAAAAGGTCAATGTCCGTTGTGCATGCAACAACCTTAAAAAAGAGTGGATATGTCAAGATGTTCTGAAGGAATACCGTCAGTCTGGTCGTGACCCAAAACAAATACCTAAAAATCAATATGCAGTTGGCCTACTTGCCTGTGGTGAAGATTGTGTTAAAAAGGTTAAAGCTGCAGATTCTGAGTTGCATCTCCGGAAAATTCAGGAGATCAAGACCCCTGCTGTGGAAGTTGAAAATGTGCCCAAGCGCAGGAAGAGGCGTAACCGTGGCCAAGAAAGTGTTGAAAGCTCAAAATTCCAGGAAATCAAAGCTGTTGCGTTGAAATTTCTCCTGGTTATTTTTCTGTGCATAATCGTTGTAGCTGGATTGTACCTTTTGTGGAAAGGTGTTTACCGGCTTTCTGATTGGATGAATGACATGGAGGAGCAGAGGGCCAGGCAGAGGCATTTGAAGCCTGGAAGATTGTAAATTAAAGACTACGGAGGGTGTTTGTGGAATATTCACAACTGAGATGTGCATCGGTTCACCGTCAGGGATTGGTTTCGGATATATGGTAGTGAAAGATGTCATCATTTTGTTATTGGAGCCAAGCCCCGGAGTTTGTAACTAGTTTGGTCTCTTGTCCGAAGCTACTGGTTAATGGAAACTAAAGT                                                                                                                                                                              ]
[-] EMBL CB673793             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TAGAAAATTACCGAATTGTCCCCATCTGTGCTCAGAAATATGTCACCCTGGTCAGTGCCCATCAGTTGATCAGTGCATGAAAAAGGTCAATGTCCGTTGTGCATGCAACAACCTTAAAAAAGAGTGGATATGTCAAGATGTTCTGAAGGAATACCGTCAGTCTGGTCGTGACCCAAAACAAATACCTAAAAATCAATATGCAGTTGGCCTACTTGCCTGTGGTGAAGATTGTGTTAAAAAGGTTAAAGCTGCAGATTCTGAGTTGCATCTCCGGAAAATTCAGGAGATCAAGACCTCTGCTGTGGAAGTTGAAAATGTGCCCAAGCGCAGGAAGAGGCGTAACCGTGGCCAAGAAAGTGTTGAAAGCTCAAAATTCCAGGAAATCAAAGCTGTTGCGTTGAAATTTCTCCTGGTTATTTTTCTGTGCATAATCGTTGTAGCTGGATTGTACCTTTTGTGGAAAGGTGTTTACCGGCTTTCTGATTGGATGAATGACATGGAGGAGCAGAGGGCCAGGCAGAGGCATTTGAAGCCTGGAAGATTGTAAATTAAAGACTACGGAGGGTGTTTGTGGAATATTCACAACTGAGATGTGCATCGGTTCACCGTCAGGGATTGGTTTCGGATATATGGTAGTGAAAGATGTCATCATTTTGTTATTGGAGCCAAGCCCCGGAGTTTGTAACTAGTTTGGTCTCTTGTCCGAAGCTACTGGTTAATGGAAACTAAAGTTATCCGTGTCAAAAGAAAGATATCATTTTGTT                                                                                                                                              ]




>consensus_8537#0
AGCAAAAGGCCACACTCCTCACAAATCTCGTGCGCGCCACCGTCATCTCCGGCGACCACC
TCACCGCCGGCCATGCCATTCTCCTACGCCGCCGCGGCCTCTGGCTCCGCGTCCTCTTCT
CGCAAGCCGGTTCCCGTCGCCGCGGCCGCCGCCCGCCGACCCGCGCCCTCGCCGGCAGCG
GCGGCGGCACCCGCGCCCTCGCCGTCAAACCCTAGCGCGGTCTCCGATTCCGACCCCTCC
TCGTACTCCTCCTCCGGGGAGGAGACCGACCTCACCGCCTCCGATCCGGCGGCCGCCTCC
GTCATCTCCTCCTACCTCTCCGTTGCGGGGGATGGCGCCGACCTCTCCAAGGTCGGGATC
TTCCTCAGCTCCGCGGCGCGCCGCCGATCGCCGCCGTGCCTGATATGCTTCGATCCCATC
CGCCCCTCCGACCCCGTCTGGTCCTGCTCCGCCTCCTGCTTCGCCCTCCTCCACCTCCAC
TGCATCCAGTCATGGGCACATCAGTCATCCTCTGCCGCGCCTTCTCCCACCTGGGGTTGC
CCCAAATGCCGCTTCCCCTATCCCAAATCCCAGACTCCCACCTCCTACCTCTGCTTCTGC
TCCAAGACGGTAGACCCAGCTCCGGACCCCTGGATCCTCCCCCACTCCTGCGGCGACGTC
TGTGGCCGACGTCTCAATGCAGACCGTGACTCTGGCTGTGAGCACAACTGCCTCCTGCTT
TGCCACCCTGGGCCATGTCCACCGTGCCCGGCAATTGTTCCAAATGCTATGTGCTTTTGC
GGCTCACATCGTGAGACGCGTCGATGCTCACATCAGCGTTATTCTTGCTCGGGGAAATGC
AATAAACGCCTCGGCTGTGGAATCCACCGGTGTCCTGTGGATTGCCATGATGGGCCTTGC
CCGCCTTGTGCGGTGCGAGGAAAGCACAAATGTGAGTGTGGAGAAACAATGGAGGAGAGG
CTATGCTCTGAAAGGGTGTTCCAGTGCAAGAGGGAGTGTGGTGGGATGTTGCAGTGTGGG
AAGCATAGTTGTGAGAGGGGTTGCCATGCTGGAAAGTGTGGAGGATGCCCACTCCAAGGG
CGACGAACTTGCCCATGTGGGAAGAAAGATTATCCAAGTTTGGACTGTGATGCAGAGGCT
GCCACATGTGGATCAACTTGCGAGAAGGTGCTTGGGTGCGGGCGGCACAAATGCCCAGAG
CGGTGTCATCGTGGTTCATGCGTTGAGACATGTCGGCTTGTGATCACAAAATCGTGCCGC
TGTGGGGGTCTCAAGAAGGAGGTGCCTTGCTACCAAGAATTGACATGCGAAAGGAAGTGT
CAGCGTTTGCGAAACTGTGGCCGCCATGCTTGTAGACGACGTTGCTGCGAGGGTGATTGT
GCACCCTGCCCAGAGGTTTGTGACAAGAGGCTCAGATGTGGCAACCATAAATGCCTATCT
CCATGCCACAGAGGTGCTTGTGCACCTTGTCCTTTGATGAAGACCATTTCATGCAACTGT
GGGCAAACATTTTTTGAGGTGCCCTGTGGGACTGAGAAGAATCAGAAGCCACCCAAATGC
TCAAAAAAATGCAATATAGCTCGCCTTTGCAGGCACAAACTTGAATGCCGGCCCCACAAG
TGCCACTATGGAGCTTGCCCACCTTGCAAACTAATCTGCGGAGAAGAACTTTCTTGTGGC
CACAGGTGTAAGCTGAGGTGTCATGGCCCCATTGCTCCTCCAAATCCTGAGTTCACACTG
AAACCAATAAAAAGGAAAAAGGGAAAGCATATAGACTCTACACCTGGAACACCATGCCCG
CCATGCCAAGAAGTTGTTTTGGTGCCATGCTTTGGACATCATCTTGGCCAAGAACGTGCA
ATACTTTGCTCCAAAAGGAGGCAGTTTCCATGTCAGAATTTATGTGGTAACCCTCTCAAC
TGTGGCAATCATTATTGTACGAAGGCTTGCCATGTGTTACAGATTCCATTGAGTCAGCCT
GAAGGAGATCAATCGGCTATACTGTCTCTTGCTAGTGCAAGTGCATTCGCTGAGCCTTGC
GAAGAATGTAACCTGCCTTGTCAAAGGGTCAGGGAGCCTCCATGTTCACATCCCTGCCCT
TTGCCATGCCATCTTAACGATTGTCCACCTTGCAAAGCCCTTGTTAAAAGACCATGTCAT
TGTGGTGCTATGGTACACGCTTTTGAGTGCATGTATTATAACAACTTAAATGCTACAAAA
CAGCAGAAAGTAAGGTCCTGTGGTGGCCCATGTCATAGAAAATTACCGAATTGTCCCCAT
CTGTGCTCAGAAATATGTCACCCTGGTCAGTGCCCATCAGTTGATCAGTGCATGAAAAAG
GTCAATGTCCGTTGTGCATGCAACAACCTTAAAAAAGAGTGGATATGTCAAGATGTTCTG
AAGGAATACCGTCAGTCTGGTCGTGACCCAAAACAAATACCTAAAAATCAATATGCAGTT
GGCCTACTTGCCTGTGGTGAAGATTGTGTTAAAAAGGTTAAAGCTGCAGATTCTGAGTTG
CATCTCCGGAAAATTCAGGAGATCAAGACCCCTGCTGTGGAAGTTGAAAATGTGCCCAAG
CGCAGGAAGAGGCGTAACCGTGGCCAAGAAAGTGTTGAAAGCTCAAAATTCCAGGAAATC
AAAGCTGTTGCGTTGAAATTTCTCCTGGTTATTTTTCTGTGCATAATCGTTGTAGCTGGA
TTGTACCTTTTGTGGAAAGGTGTTTACCGGCTTTCTGATTGGATGAATGACATGGAGGAG
CAGAGGGCCAGGCAGAGGCATTTGAAGCCTGGAAGATTGTAAATTAAAGACTACGGAGGG
TGTTTGTGGAATATTCACAACTGAGATGTGCATCGGTTCACCGTCAGGGATTGGTTTCGG
ATATATGGTAGTGAAAGATGTCATCATTTTGTTATTGGAGCCAAGCCCCGGAGTTTGTAA
CTAGTTTGGTCTCTTGTCCGAAGCTACTGGTTAATGGAAACTAAAGTTATCCGTGTCAAA
AGAAAGATATCATTTTGTTCTTTGTTTGCCAAACAAAATGTAGGAACTCAACAACCTTGT
ACTGTAGTTTACATGCATACTGTGTTCGAGTGAATTAAGGGTGTGTTTAGTTCACGTCAA
AATTAGAAGTTTCATTGAAATTGAAACGATGTGATGGAAAA

consensusID : consensus_8537#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 505
fasta sequence 
                              [GCCNGAGGGGGTACNNGCCAGGAGNGTGAAGTCAAATTCCAGGAATCAAAGCNGTTGGTGNAATTTTNCTGGNATTTTTNTGGCATAATCGTTGTAGCTGGATTGTACCTTTNGTGGAAAGGTGTTTACCGGCTTTNTGATTGGATGAATGACATGGAGGAGCAGAGGGCCAGGCAGAGGCATTTGAAGCCTGGAAGATTGTAAATTAAAGACTACGGAGGGTGTTTGTGGAATATTCACAACTGAGATGTGCATCGGTTCACCGTCAGGGATTGGTTTCGGATATATGGTAGTGAAAGATGTCATCATTTTGTTATTGGAGCCAAGCCCCGGAGTTTGTAACTAGTTTGGTCTCTTGTCCGAAGNTACTGGTTAATGGAAACTAAAGTTATCCGTGTCAAAAGAAAGATATCATTTTGTTCTTTGTTTGCCAAACAAAATGTAGGAACTCAACAACCTTGTACTGTAGTTTACATGCATACTGTGTTCGAGTGAAAAAAAAAAA]

[+] EMBL AA753625             [GCCNGAGGGGGTACNNGCCAGGAGNGTGAAGTCAAATTCCAGGAATCAAAGCNGTTGGTGNAATTTTNCTGGNATTTTTNTGGCATAATCGTTGTAGCTGGATTGTACCTTTNGTGGAAAGGTGTTTACCGGCTTTNTGATTGGATGAATGACATGGAGGAGCAGAGGGCCAGGCAGAGGCATTTGAAGCCTGGAAGATTGTAAATTAAAGACTACGGAGGGTGTTTGTGGAATATTCACAACTGAGATGTGCATCGGTTCACCGTCAGGGATTGGTTTCGGATATATGGTAGTGAAAGATGTCATCATTTTGTTATTGGAGCCAAGCCCCGGAGTTTGTAACTAGTTTGGTCTCTTGTCCGAAGNTACTGGTTAATGGAAACTAAAGTTATCCGTGTCAAAAGAAAGATATCATTTTGTTCTTTGTTTGCCAAACAAAATGTAGGAACTCAACAACCTTGTACTGTAGTTTACATGCATACTGTGTTCGAGTGAAAAAAAAAAA]




>consensus_8537#1
GCCNGAGGGGGTACNNGCCAGGAGNGTGAAGTCAAATTCCAGGAATCAAAGCNGTTGGTG
NAATTTTNCTGGNATTTTTNTGGCATAATCGTTGTAGCTGGATTGTACCTTTNGTGGAAA
GGTGTTTACCGGCTTTNTGATTGGATGAATGACATGGAGGAGCAGAGGGCCAGGCAGAGG
CATTTGAAGCCTGGAAGATTGTAAATTAAAGACTACGGAGGGTGTTTGTGGAATATTCAC
AACTGAGATGTGCATCGGTTCACCGTCAGGGATTGGTTTCGGATATATGGTAGTGAAAGA
TGTCATCATTTTGTTATTGGAGCCAAGCCCCGGAGTTTGTAACTAGTTTGGTCTCTTGTC
CGAAGNTACTGGTTAATGGAAACTAAAGTTATCCGTGTCAAAAGAAAGATATCATTTTGT
TCTTTGTTTGCCAAACAAAATGTAGGAACTCAACAACCTTGTACTGTAGTTTACATGCAT
ACTGTGTTCGAGTGAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8537#0      AGCAAAAGGCCACACTCCTCACAAATCTCGTGCGCGCCACCGTCATCTCCGGCGACCACC 60
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      TCACCGCCGGCCATGCCATTCTCCTACGCCGCCGCGGCCTCTGGCTCCGCGTCCTCTTCT 120
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CGCAAGCCGGTTCCCGTCGCCGCGGCCGCCGCCCGCCGACCCGCGCCCTCGCCGGCAGCG 180
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      GCGGCGGCACCCGCGCCCTCGCCGTCAAACCCTAGCGCGGTCTCCGATTCCGACCCCTCC 240
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      TCGTACTCCTCCTCCGGGGAGGAGACCGACCTCACCGCCTCCGATCCGGCGGCCGCCTCC 300
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      GTCATCTCCTCCTACCTCTCCGTTGCGGGGGATGGCGCCGACCTCTCCAAGGTCGGGATC 360
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      TTCCTCAGCTCCGCGGCGCGCCGCCGATCGCCGCCGTGCCTGATATGCTTCGATCCCATC 420
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CGCCCCTCCGACCCCGTCTGGTCCTGCTCCGCCTCCTGCTTCGCCCTCCTCCACCTCCAC 480
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      TGCATCCAGTCATGGGCACATCAGTCATCCTCTGCCGCGCCTTCTCCCACCTGGGGTTGC 540
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CCCAAATGCCGCTTCCCCTATCCCAAATCCCAGACTCCCACCTCCTACCTCTGCTTCTGC 600
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      TCCAAGACGGTAGACCCAGCTCCGGACCCCTGGATCCTCCCCCACTCCTGCGGCGACGTC 660
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      TGTGGCCGACGTCTCAATGCAGACCGTGACTCTGGCTGTGAGCACAACTGCCTCCTGCTT 720
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      TGCCACCCTGGGCCATGTCCACCGTGCCCGGCAATTGTTCCAAATGCTATGTGCTTTTGC 780
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      GGCTCACATCGTGAGACGCGTCGATGCTCACATCAGCGTTATTCTTGCTCGGGGAAATGC 840
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      AATAAACGCCTCGGCTGTGGAATCCACCGGTGTCCTGTGGATTGCCATGATGGGCCTTGC 900
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CCGCCTTGTGCGGTGCGAGGAAAGCACAAATGTGAGTGTGGAGAAACAATGGAGGAGAGG 960
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CTATGCTCTGAAAGGGTGTTCCAGTGCAAGAGGGAGTGTGGTGGGATGTTGCAGTGTGGG 1020
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      AAGCATAGTTGTGAGAGGGGTTGCCATGCTGGAAAGTGTGGAGGATGCCCACTCCAAGGG 1080
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CGACGAACTTGCCCATGTGGGAAGAAAGATTATCCAAGTTTGGACTGTGATGCAGAGGCT 1140
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      GCCACATGTGGATCAACTTGCGAGAAGGTGCTTGGGTGCGGGCGGCACAAATGCCCAGAG 1200
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CGGTGTCATCGTGGTTCATGCGTTGAGACATGTCGGCTTGTGATCACAAAATCGTGCCGC 1260
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      TGTGGGGGTCTCAAGAAGGAGGTGCCTTGCTACCAAGAATTGACATGCGAAAGGAAGTGT 1320
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CAGCGTTTGCGAAACTGTGGCCGCCATGCTTGTAGACGACGTTGCTGCGAGGGTGATTGT 1380
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      GCACCCTGCCCAGAGGTTTGTGACAAGAGGCTCAGATGTGGCAACCATAAATGCCTATCT 1440
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CCATGCCACAGAGGTGCTTGTGCACCTTGTCCTTTGATGAAGACCATTTCATGCAACTGT 1500
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      GGGCAAACATTTTTTGAGGTGCCCTGTGGGACTGAGAAGAATCAGAAGCCACCCAAATGC 1560
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      TCAAAAAAATGCAATATAGCTCGCCTTTGCAGGCACAAACTTGAATGCCGGCCCCACAAG 1620
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      TGCCACTATGGAGCTTGCCCACCTTGCAAACTAATCTGCGGAGAAGAACTTTCTTGTGGC 1680
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CACAGGTGTAAGCTGAGGTGTCATGGCCCCATTGCTCCTCCAAATCCTGAGTTCACACTG 1740
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      AAACCAATAAAAAGGAAAAAGGGAAAGCATATAGACTCTACACCTGGAACACCATGCCCG 1800
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CCATGCCAAGAAGTTGTTTTGGTGCCATGCTTTGGACATCATCTTGGCCAAGAACGTGCA 1860
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      ATACTTTGCTCCAAAAGGAGGCAGTTTCCATGTCAGAATTTATGTGGTAACCCTCTCAAC 1920
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      TGTGGCAATCATTATTGTACGAAGGCTTGCCATGTGTTACAGATTCCATTGAGTCAGCCT 1980
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      GAAGGAGATCAATCGGCTATACTGTCTCTTGCTAGTGCAAGTGCATTCGCTGAGCCTTGC 2040
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      GAAGAATGTAACCTGCCTTGTCAAAGGGTCAGGGAGCCTCCATGTTCACATCCCTGCCCT 2100
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      TTGCCATGCCATCTTAACGATTGTCCACCTTGCAAAGCCCTTGTTAAAAGACCATGTCAT 2160
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      TGTGGTGCTATGGTACACGCTTTTGAGTGCATGTATTATAACAACTTAAATGCTACAAAA 2220
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CAGCAGAAAGTAAGGTCCTGTGGTGGCCCATGTCATAGAAAATTACCGAATTGTCCCCAT 2280
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CTGTGCTCAGAAATATGTCACCCTGGTCAGTGCCCATCAGTTGATCAGTGCATGAAAAAG 2340
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      GTCAATGTCCGTTGTGCATGCAACAACCTTAAAAAAGAGTGGATATGTCAAGATGTTCTG 2400
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      AAGGAATACCGTCAGTCTGGTCGTGACCCAAAACAAATACCTAAAAATCAATATGCAGTT 2460
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      GGCCTACTTGCCTGTGGTGAAGATTGTGTTAAAAAGGTTAAAGCTGCAGATTCTGAGTTG 2520
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CATCTCCGGAAAATTCAGGAGATCAAGACCCCTGCTGTGGAAGTTGAAAATGTGCCCAAG 2580
consensus_8537#1      ------------------------------------------------------------
                                                                                  

consensus_8537#0      CGCAGGAAGAGGCGTAACCGTGGCCAAGAAAGTGTTGAAAGCTCAAAATTCCAGGAAATC 2640
consensus_8537#1      -GCCNGAGGGGGTACNN-----GCCAGGAGNGTG----AAGTC--AAATTCCAGGAA-TC 47
                       **  ** * **          **** **  ***    ***    ************ **

consensus_8537#0      AAAGCTGTTGCGTTGAAATTTCTCCTGGTTATTTTTCTGTGCATAATCGTTGTAGCTGGA 2700
consensus_8537#1      AAAGCNGTTGG--TGNAATTT-TNCTGGN-ATTTTTNTG-GCATAATCGTTGTAGCTGGA 102
                      ***** ****   ** ***** * ****  ****** ** ********************

consensus_8537#0      TTGTACCTTTTGTGGAAAGGTGTTTACCGGCTTTCTGATTGGATGAATGACATGGAGGAG 2760
consensus_8537#1      TTGTACCTTTNGTGGAAAGGTGTTTACCGGCTTTNTGATTGGATGAATGACATGGAGGAG 162
                      ********** *********************** *************************

consensus_8537#0      CAGAGGGCCAGGCAGAGGCATTTGAAGCCTGGAAGATTGTAAATTAAAGACTACGGAGGG 2820
consensus_8537#1      CAGAGGGCCAGGCAGAGGCATTTGAAGCCTGGAAGATTGTAAATTAAAGACTACGGAGGG 222
                      ************************************************************

consensus_8537#0      TGTTTGTGGAATATTCACAACTGAGATGTGCATCGGTTCACCGTCAGGGATTGGTTTCGG 2880
consensus_8537#1      TGTTTGTGGAATATTCACAACTGAGATGTGCATCGGTTCACCGTCAGGGATTGGTTTCGG 282
                      ************************************************************

consensus_8537#0      ATATATGGTAGTGAAAGATGTCATCATTTTGTTATTGGAGCCAAGCCCCGGAGTTTGTAA 2940
consensus_8537#1      ATATATGGTAGTGAAAGATGTCATCATTTTGTTATTGGAGCCAAGCCCCGGAGTTTGTAA 342
                      ************************************************************

consensus_8537#0      CTAGTTTGGTCTCTTGTCCGAAGCTACTGGTTAATGGAAACTAAAGTTATCCGTGTCAAA 3000
consensus_8537#1      CTAGTTTGGTCTCTTGTCCGAAGNTACTGGTTAATGGAAACTAAAGTTATCCGTGTCAAA 402
                      *********************** ************************************

consensus_8537#0      AGAAAGATATCATTTTGTTCTTTGTTTGCCAAACAAAATGTAGGAACTCAACAACCTTGT 3060
consensus_8537#1      AGAAAGATATCATTTTGTTCTTTGTTTGCCAAACAAAATGTAGGAACTCAACAACCTTGT 462
                      ************************************************************

consensus_8537#0      ACTGTAGTTTACATGCATACTGTGTTCGAGTGAATTAAGGGTGTGTTTAGTTCACGTCAA 3120
consensus_8537#1      ACTGTAGTTTACATGCATACTGTGTTCGAGTGAAAAAAAAAAA----------------- 505
                      **********************************  **                      

consensus_8537#0      AATTAGAAGTTTCATTGAAATTGAAACGATGTGATGGAAAA 3161
consensus_8537#1      -----------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)