|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8540#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3024 fasta sequence
[CCCTTGACTTCCTCCCCCTTCTCTCCTCCTCCCACAAAACGTGACCGAATCCGGCTGATCCGAGCCCGCCGACCTCCCCGGCTTCCCCGATCCGGCGACGATGGATGGCGGCGGCGGAGGCGACGCCTTCGGGTCCGCGACCGCGCCGCTGGCCTGGCACGACTTCCTGGAGCGCATGCGCCAGCCCTCCGCCGCCGACTTCGTCAAGTCCATCAAGGGCTTTATCGTAACGTTCTCGAACAGAGCTCCTGACCCTGAACATGATAGTGCGGCTGTTCAAGAATTCCTGGAAAATATGGAAGGTGCTTTCAGGGCTCACACCCCCTGGGCTGGAAGTTCTGAAGAAGAACTAGAAAGTGCCGGGCCTTGAGAAATACGTTATGACAAAGCTGTTCAATCGGGTATTTGCTTCTGTCCCGGAAGATGTGAAGAGTGATGAAGAACTTTTTGAGAAGATGTCTTTGTTACAGCAGTTTATACGGCCTGAAAACTTGGATATCAAACCAGAATATCAAAGTGAAACATCATGGCTGCTTGCACAGAAGGAGCTGCAGAAGATAAACATGTATAAGGCTCCAAGGGATAAGCTTGCTTGCATCCTGAACTGCTGTAAAGTCATCAACAACCTACTTCTAAATGCGTCTATTGTATCAAATGAAAATCCCCCGGGAGCTGATGAATTCCTTCCAGTCCTCATCTATGTTACCATAAAGGTATGATTCACTACTTGTTAAAGTACTGGTTGATGATACAAATGAACCATCAAATATTGACAATATTATATTAAGTTGTTGGTGCTGTATTGGAGAAAGAAAATTTGCCCCCTTTGATATGGCACAGATTAGGTGTCGACTTGATGGTGACTATTTGTGTATTACCTACTCAACTTTGATATTTTCTAGAAAAAATATAAGCCTATTATTGGTGCAGTGGTACGTGATTTGTTGGGCACATTGCCTCTTAATAGAGTTGTCAGTGCGCTGTGCAACCTCATTTACTGTTGCTTCGTATTACTTTTAGTTCCAACTTCTACCTATCTATTATGATGCAGGTTCCATGTCTAATCTAATAGTGAGTTTTGTACTGAAATAGTTTGCCAGATTTGAGAGCAACCTTGTCATGCACTCATGCCCATCAGTACATGTGCTTAGAGCAACCATGAATCTGTGAACCATCAGTTGGGCATCCCTCCTCTAGCTAGGCACTACATCAGTTTTGATTACAAATGATGGTTAAACTTTCATTACAAACCTAATAGTTGGCATTTGAGTGGTTGTGGACTTGTTTTTGAAAACTGCAGCAAATGACCATAAAGGGCTTAAGATCAGATCATGTACGGTTATCACTTTACTTTTCTCTTCATTACCGGAAAGAGCTTGTCAACTACTGAATGGTAAGAGTTAATGATATATGTGCTCTTCTAGTTTGGCCTCTCAAGGTATTACGTGCTTCTGGAATTACTGCAGTTAGCCTAAACTACCCTTGCACCGCAATTCAGCATTAGTTGTAGTTTTGTTCTATCATCTGAACTACAATGTTATGATCCTTTTGCCTGAAAATCATCTGTAAAGTGTTTTTATTTGTCATTTAAATTAAGGTAGCCAAAAGAATTTAAGCAGTAGCTGTTCTTAATGCAGGCAAATCCTCCACAGTTACACTCAAATCTATTATATATACAGCGATACAGACGTCAATCACGGTTGGTGTCAGAAGCTCAGTATTTCTTTACAAACATCTTATCCGCTGAGTCTTTCATCTGGAACATTGATGGGGAATCATTATCAATGGATGAACGAGATTTCCAAAAGAAGATGGACTTGGCAAGGGAACGCATGTTGGGATTATCAGCTAGCTCAGAGAATCAGGACAACCAAAACAATCTTGATGTACGGGAGCAAAAATCACAAACACTGAAAGCTAGCAGGGATTCTGATGTCAATCTCTCTTTGAAAGATAATTTCCAAGGTCCTGGACTGGAAATGAGAAGGGACAGTGATGCAAGTAGTAACCCAGTTGAGCGTGTGCAATCGATTTCTGATTTGGAGAAGAAAGGAGCAGCCGAGCTTCTCAAGGATGATGACTTGAACAAAAAAATTCAAGAGTACCCATTCCTTTTTGCCCGCTCTGGTGATCTGACTGTTGCTGATGTAGAAAACCTTTTAAACTCCTACAAGCAGCTAGTACTAAAGTATGTAGCGCTTTCGCAAGGGATGGGTATCAACCTTGAAAACCCTCCTGTTCAGAGCATGCAAACTGTTTCTGATCTTGTGGAATCTGAGGAGCCTAAAAATGTGAAGAATGCAGTAAATTTCAGCGAAGGAAGCAGCAAAACCAGTGATGACATAAAAAATGATACTCTTTATTCAGAAGTAGACAACACGGGTACCCAACAAACTGCGGTTG-ACCCAAGTTATCAGAAGGCACAGCAGGATGAAGCATCAGATCAACCTGAACATGCATGAGTTGTTGGTCAAGTATGGTTGGCCGTCGAAATACA-GGGAAAACGTTGTCAACGGCGGGTCATTCTCT--TATATCAAGGGGTGACAACTGGTTACAGAGAAGTGGGTGCATTGCTGTGCTCCTGAAGCCACAAAATGTAAATGCTGGAAACTAGAATATAGAGATTCAAGTCCCTGGAAACTAGAATATAGAGATTCTCTTATATCAGCGTCGAGGAAGATCAAGATTCATTCTGCTGAAGCAAAGCTCCTTGTCCCGACGTTCGTTCATTGATCCTTTGGTTATGGACTCTTCAAGTTTGATTTTGCGGTTAATACCATTTTGGTAAACCATTTTACTTTTGTAGTTCAAATTAAAATATCCATATGTGAAATTAGATCCAAGAGAAAATGGCATGAAACATAATTTGATCGTCTTCTAGTTGTTGTCTTTAGCTGCTAGTACTAGTGCATACCGATGTTCGTCTTCTACAGATTAGTTATCACCGGTGTTTTGAGCACCTCAACTTCATTTGTTTGGTTTAAATGGACATAATTTCAGGGAACTATTCCTTCCCTGTCGATT]
[+] EMBL AK070551 [CCCTTGACTTCCTCCCCCTTCTCTCCTCCTCCCACAAAACGTGACCGAATCCGGCTGATCCGAGCCCGCCGACCTCCCCGGCTTCCCCGATCCGGCGACGATGGATGGCGGCGGCGGAGGCGACGCCTTCGGGTCCGCGACCGCGCCGCTGGCCTGGCACGACTTCCTGGAGCGCATGCGCCAGCCCTCCGCCGCCGACTTCGTCAAGTCCATCAAGGGCTTTATCGTAACGTTCTCGAACAGAGCTCCTGACCCTGAACATGATAGTGCGGCTGTTCAAGAATTCCTGGAAAATATGGAAGGTGCTTTCAGGGCTCACACCCCCTGGGCTGGAAGTTCTGAAGAAGAACTAGAAAGTGCCGGGCCTTGAGAAATACGTTATGACAAAGCTGTTCAATCGGGTATTTGCTTCTGTCCCGGAAGATGTGAAGAGTGATGAAGAACTTTTTGAGAAGATGTCTTTGTTACAGCAGTTTATACGGCCTGAAAACTTGGATATCAAACCAGAATATCAAAGTGAAACATCATGGCTGCTTGCACAGAAGGAGCTGCAGAAGATAAACATGTATAAGGCTCCAAGGGATAAGCTTGCTTGCATCCTGAACTGCTGTAAAGTCATCAACAACCTACTTCTAAATGCGTCTATTGTATCAAATGAAAATCCCCCGGGAGCTGATGAATTCCTTCCAGTCCTCATCTATGTTACCATAAAGGTATGATTCACTACTTGTTAAAGTACTGGTTGATGATACAAATGAACCATCAAATATTGACAATATTATATTAAGTTGTTGGTGCTGTATTGGAGAAAGAAAATTTGCCCCCTTTGATATGGCACAGATTAGGTGTCGACTTGATGGTGACTATTTGTGTATTACCTACTCAACTTTGATATTTTCTAGAAAAAATATAAGCCTATTATTGGTGCAGTGGTACGTGATTTGTTGGGCACATTGCCTCTTAATAGAGTTGTCAGTGCGCTGTGCAACCTCATTTACTGTTGCTTCGTATTACTTTTAGTTCCAACTTCTACCTATCTATTATGATGCAGGTTCCATGTCTAATCTAATAGTGAGTTTTGTACTGAAATAGTTTGCCAGATTTGAGAGCAACCTTGTCATGCACTCATGCCCATCAGTACATGTGCTTAGAGCAACCATGAATCTGTGAACCATCAGTTGGGCATCCCTCCTCTAGCTAGGCACTACATCAGTTTTGATTACAAATGATGGTTAAACTTTCATTACAAACCTAATAGTTGGCATTTGAGTGGTTGTGGACTTGTTTTTGAAAACTGCAGCAAATGACCATAAAGGGCTTAAGATCAGATCATGTACGGTTATCACTTTACTTTTCTCTTCATTACCGGAAAGAGCTTGTCAACTACTGAATGGTAAGAGTTAATGATATATGTGCTCTTCTAGTTTGGCCTCTCAAGGTATTACGTGCTTCTGGAATTACTGCAGTTAGCCTAAACTACCCTTGCACCGCAATTCAGCATTAGTTGTAGTTTTGTTCTATCATCTGAACTACAATGTTATGATCCTTTTGCCTGAAAATCATCTGTAAAGTGTTTTTATTTGTCATTTAAATTAAGGTAGCCAAAAGAATTTAAGCAGTAGCTGTTCTTAATGCAGGCAAATCCTCCACAGTTACACTCAAATCTATTATATATACAGCGATACAGACGTCAATCACGGTTGGTGTCAGAAGCTCAGTATTTCTTTACAAACATCTTATCCGCTGAGTCTTTCATCTGGAACATTGATGGGGAATCATTATCAATGGATGAACGAGATTTCCAAAAGAAGATGGACTTGGCAAGGGAACGCATGTTGGGATTATCAGCTAGCTCAGAGAATCAGGACAACCAAAACAATCTTGATGTACGGGAGCAAAAATCACAAACACTGAAAGCTAGCAGGGATTCTGATGTCAATCTCTCTTTGAAAGATAATTTCCAAGGTCCTGGACTGGAAATGAGAAGGGACAGTGATGCAAGTAGTAACCCAGTTGAGCGTGTGCAATCGATTTCTGATTTGGAGAAGAAAGGAGCAGCCGAGCTTCTCAAGGATGATGACTTGAACAAAAAAATTCAAGAGTACCCATTCCTTTTTGCCCGCTCTGGTGATCTGACTGTTGCTGATGTAGAAAACCTTTTAAACTCCTACAAGCAGCTAGTACTAAAGTATGTAGCGCTTTCGCAAGGGATGGGTATCAACCTTGAAAACCCTCCTGTTCAGAGCATGCAAACTGTTTCTGATCTTGTGGAATCTGAGGAGCCTAAAAATGTGAAGAATGCAGTAAATTTCAGCGAAGGAAGCAGCAAAACCAGTGATGACATAAAAAATGATACTCTTTATTCAGAAGTAGACAACACGGGTACCCAACAAACTGCGGTTG ACCCAAGTTATCAGAAGGCACAGCAGGATGAAGCATCAGATCAACCTGAACATGCATGAGTTGTTGGTCAAGTATGGTTGGCCGTCGAAATACA GGGAAAACGTTGTCAACGGCGGGTCATTCTCTTATATATCAAGGGGTGACAACTGGTTACAGAGAAGTGGGTGCATTGCTGTGCTCCTGAAGCCACAAAATGTAAATGCTGGAAACTAGAATATAGAGATTCAAGTCCCTGGAAACTAGAATATAGAGATTCTCTTATATCAGCGTCGAGGAAGATCAAGATTCATTCTGCTGAAGCAAAGCTCCTTGTCCCGACGTTCGTTCATTGATCCTTTGGTTATGGACTCTTCAAGTTTGATTTTGCGGTTAATACCATTTTGGTAAACCATTTTACTTTTGTAGTTCAAATTAAAATATCCATATGTGAAATTAGATCCAAGAGAAAATGGCATGAAACATAATTTGATCGTCTTCTAGTTGTTGTCTTTAGCTGCTAGTACTAGTGCATACCGATGTTCGTCTTCTACAGATTAGTTATCACCGGTGTTTTGAGCACCTCAACTTCATTTGTTTGGTTTAAATGGACATAATTTCAGGGAACTATTCC ]
[-] EMBL CB628503 [ ACTGTTTCTGATCTTGTGGAATCTGAGGAGCCTAAAAATGTGAAGAATGCAGTAAATTTCAGCGAAGGAAGCAGCAAAACCAGTGATGACATAAAAAATGATACTCTTTATTCAGAAGTAGACAACACGGGTACCCAACAAACTGCGGTTG ACCCAAGTTATCAGAAGGCACAGCAGGATGAAGCATCAGATCAACCTGAACATGCATGAGTTGTTGGTCAAGTATGGTTGGCCGTCGAAATACA GGGAAAACGTTGTCAACGGCGGGTCATTCTCT TATATCAAGGGGTGACAACTGGTTACAGAGAAGTGGGTGCATTGCTGTGCTCCTGAAGCCACAAAATGTAAATGCTGGAAACTAGAATATAGAGATTCAAGTCCCTGGAAACTAGAATATAGAGATTCTCTTATATCAGCGTCGAGGAAGATCAAGATTCATTCTGCTGAAGCAAAGCTCCTTGTCCCGACGTTCGTTCATTGATCCTTTGGTTATGGACTCTTCAAGTTTGATTTTGCGGTTAATACCATTTTGGTAAACCATTTTACTTTTGTAGTTCAAATTAAAATATCCATATGTGAAATTAGATCCAAGAGAAAATGGCATGAAACATAATTTGATCGTCTTCTAGTTGTTGTCTTTAGCTGCTAGTACTAGTGCATACCGATGTTCGTCTTCTACAGATTAGTTATCACCGGTGTTTTGAGCACCTCAACTTCATTTGTTTGGTTTAAATGGACATAATTTCAGGGAACTATTCCTTCCCTGTCGATT]
[+] EMBL BM420962 [ TTATTCAGAAGTAGACAACACGGGTACCC AC AACTGCGGTTGTACCCAAGTTATCAGAAGGCACAGCAGGATGAAGCATCAGATCAACCTGAACATGCATGAGTTGTTGGTCAAGTATGGTTGGCCGTCGAAATACACGGGAAAACGTTGTCAACGGCGGGTCATTCTCT TATATCAAGGGGTGACAACTGGTTACAGAGAAGTGGGTGCATTGCTGTGCTCCTGAAGCCACAAAATGTAAATGCTGGAAACTAGAATATAGAGATTCAAGTCCCTGGAAACTAGAATATAGAGATTCTCTTATATCAGCGTCGAGGAAGATCAAGATTCATTCTGCTGAAGCAAAGCTCCTTGTCCCGACGTTCGTTCATTGATCCTTTGGTTATGGACTCTTCAAGTTTGATTTT CGGTTAATACCATTTTGGTAAACC TTTTACTTTTGTAGTTCAAATTAAAATATCCATATGTGAAATTAGATCCAAGAGAAAATGGCATGAAACATAATTTGATCGTCTaaaaaaaaa ]
consensusID : consensus_8540#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 703 fasta sequence
[GAATGCAGTAAATTTCAGCGAAGGAAGCAGCAAAACCAGTGATGACATAAAAAATGATACTCTTTATTCAGAAGTAGACAACACGGGTACCCAACAAACTGCGGTTGACCCAAGTTATCAGAAGGCACAGCAGGATGAAGCATCAGATCAACCTGAACATGCATGAGTTGTTGGTCAAGTATGGTTGGCCGTCGAAATACAGGGAAAACGTTGTCAACGGCGGGTCATTCTCTTATATCAAGGGGTGACAACTGGTTACAGAGAAGTGGGTGCATTGCTGTGCTCCTGAAGCCACAAAATGTAAATGCTGGAAACTAGAATATAGAGATTCAAGTCCCTGGAAACTAGAATATAGAGATTCTCTTATATCAGCGTCGAGGAAGATCAAGATTCATTCTGCTGAAGCAAAGCTCCTTGTCCCGACGTTCGTTCATTGATCCTTTGGTTATGGACTCTTCAAGTTTGATTTTGCGGTTAATACCATTTTGGTAAACCATTTTACTTTTGTAGTTCAAATTAAAATATCCATATGTGAAATTAGATCCAAGAGAAAATGGCATGAAACATAATTTGATGGTGTTCTAGTTGTTGTNTTTAAAACGCCGCCATCCATCGTCGCCGGATCGGGGAAGCCGGGGAGAGTCGGCGGGCTCGGATCAGCCGGATTCGGTCACGTTTTGTGGGAGGAGGAGAGAAGGGGGAG]
[-] EMBL CB628502 [GAATGCAGTAAATTTCAGCGAAGGAAGCAGCAAAACCAGTGATGACATAAAAAATGATACTCTTTATTCAGAAGTAGACAACACGGGTACCCAACAAACTGCGGTTGACCCAAGTTATCAGAAGGCACAGCAGGATGAAGCATCAGATCAACCTGAACATGCATGAGTTGTTGGTCAAGTATGGTTGGCCGTCGAAATACAGGGAAAACGTTGTCAACGGCGGGTCATTCTCTTATATCAAGGGGTGACAACTGGTTACAGAGAAGTGGGTGCATTGCTGTGCTCCTGAAGCCACAAAATGTAAATGCTGGAAACTAGAATATAGAGATTCAAGTCCCTGGAAACTAGAATATAGAGATTCTCTTATATCAGCGTCGAGGAAGATCAAGATTCATTCTGCTGAAGCAAAGCTCCTTGTCCCGACGTTCGTTCATTGATCCTTTGGTTATGGACTCTTCAAGTTTGATTTTGCGGTTAATACCATTTTGGTAAACCATTTTACTTTTGTAGTTCAAATTAAAATATCCATATGTGAAATTAGATCCAAGAGAAAATGGCATGAAACATAATTTGATGGTGTTCTAGTTGTTGTNTTTAAAACGCCGCCATCCATCGTCGCCGGATCGGGGAAGCCGGGGAGAGTCGGCGGGCTCGGATCAGCCGGATTCGGTCACGTTTTGTGGGAGGAGGAGAGAAGGGGGAG]
consensusID : consensus_8540#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 444 fasta sequence
[AGATCAACCTGAACATGCATGAGTTGTTGTCAAGTATGGTTGCCGTCGAAATACAGGGAAAACGTTGTCAACGGCGGGTCATTCTCTTATATCAAGGGGTGACAACTGGTTACAGAGAAGTGGGTCATTGCTGTGCTCCTGAAGCCAACAAAATGTAAATGCTGGAAACTAGAATATAGAGATTCAAGTCCCCTGGAAACTAGAATATAGAGATTCTCTTATATCAGCGTCGAGGAAGATCAAGATTCATTCTGCTGAAGCAAGCTCCTTGTCCCGACGTTCGTTCATTGATCCTTTGGTTATGGACTCTTCAAGTTTGATTTTCGGTTAATACCATTTTGGTAAACCATTTTACTTTTGTAGTTCAAATTAAAATATCCATATGTGAAATTAGATCCAAGAGAAAATGGCATGAAACATAATTTGATCGTCTAAAAAAAAAAA]
[+] EMBL BM038325 [AGATCAACCTGAACATGCATGAGTTGTTGTCAAGTATGGTTGCCGTCGAAATACAGGGAAAACGTTGTCAACGGCGGGTCATTCTCTTATATCAAGGGGTGACAACTGGTTACAGAGAAGTGGGTCATTGCTGTGCTCCTGAAGCCAACAAAATGTAAATGCTGGAAACTAGAATATAGAGATTCAAGTCCCCTGGAAACTAGAATATAGAGATTCTCTTATATCAGCGTCGAGGAAGATCAAGATTCATTCTGCTGAAGCAAGCTCCTTGTCCCGACGTTCGTTCATTGATCCTTTGGTTATGGACTCTTCAAGTTTGATTTTCGGTTAATACCATTTTGGTAAACCATTTTACTTTTGTAGTTCAAATTAAAATATCCATATGTGAAATTAGATCCAAGAGAAAATGGCATGAAACATAATTTGATCGTCTAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8540#0 CCCTTGACTTCCTCCCCCTTCTCTCCTCCTCCCACAAAACGTGACCGAATCCGGCTGATC 60
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 CGAGCCCGCCGACCTCCCCGGCTTCCCCGATCCGGCGACGATGGATGGCGGCGGCGGAGG 120
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 CGACGCCTTCGGGTCCGCGACCGCGCCGCTGGCCTGGCACGACTTCCTGGAGCGCATGCG 180
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 CCAGCCCTCCGCCGCCGACTTCGTCAAGTCCATCAAGGGCTTTATCGTAACGTTCTCGAA 240
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 CAGAGCTCCTGACCCTGAACATGATAGTGCGGCTGTTCAAGAATTCCTGGAAAATATGGA 300
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 AGGTGCTTTCAGGGCTCACACCCCCTGGGCTGGAAGTTCTGAAGAAGAACTAGAAAGTGC 360
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 CGGGCCTTGAGAAATACGTTATGACAAAGCTGTTCAATCGGGTATTTGCTTCTGTCCCGG 420
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 AAGATGTGAAGAGTGATGAAGAACTTTTTGAGAAGATGTCTTTGTTACAGCAGTTTATAC 480
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 GGCCTGAAAACTTGGATATCAAACCAGAATATCAAAGTGAAACATCATGGCTGCTTGCAC 540
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 AGAAGGAGCTGCAGAAGATAAACATGTATAAGGCTCCAAGGGATAAGCTTGCTTGCATCC 600
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 TGAACTGCTGTAAAGTCATCAACAACCTACTTCTAAATGCGTCTATTGTATCAAATGAAA 660
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 ATCCCCCGGGAGCTGATGAATTCCTTCCAGTCCTCATCTATGTTACCATAAAGGTATGAT 720
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 TCACTACTTGTTAAAGTACTGGTTGATGATACAAATGAACCATCAAATATTGACAATATT 780
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 ATATTAAGTTGTTGGTGCTGTATTGGAGAAAGAAAATTTGCCCCCTTTGATATGGCACAG 840
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 ATTAGGTGTCGACTTGATGGTGACTATTTGTGTATTACCTACTCAACTTTGATATTTTCT 900
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 AGAAAAAATATAAGCCTATTATTGGTGCAGTGGTACGTGATTTGTTGGGCACATTGCCTC 960
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 TTAATAGAGTTGTCAGTGCGCTGTGCAACCTCATTTACTGTTGCTTCGTATTACTTTTAG 1020
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 TTCCAACTTCTACCTATCTATTATGATGCAGGTTCCATGTCTAATCTAATAGTGAGTTTT 1080
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 GTACTGAAATAGTTTGCCAGATTTGAGAGCAACCTTGTCATGCACTCATGCCCATCAGTA 1140
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 CATGTGCTTAGAGCAACCATGAATCTGTGAACCATCAGTTGGGCATCCCTCCTCTAGCTA 1200
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 GGCACTACATCAGTTTTGATTACAAATGATGGTTAAACTTTCATTACAAACCTAATAGTT 1260
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 GGCATTTGAGTGGTTGTGGACTTGTTTTTGAAAACTGCAGCAAATGACCATAAAGGGCTT 1320
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 AAGATCAGATCATGTACGGTTATCACTTTACTTTTCTCTTCATTACCGGAAAGAGCTTGT 1380
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 CAACTACTGAATGGTAAGAGTTAATGATATATGTGCTCTTCTAGTTTGGCCTCTCAAGGT 1440
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 ATTACGTGCTTCTGGAATTACTGCAGTTAGCCTAAACTACCCTTGCACCGCAATTCAGCA 1500
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 TTAGTTGTAGTTTTGTTCTATCATCTGAACTACAATGTTATGATCCTTTTGCCTGAAAAT 1560
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 CATCTGTAAAGTGTTTTTATTTGTCATTTAAATTAAGGTAGCCAAAAGAATTTAAGCAGT 1620
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 AGCTGTTCTTAATGCAGGCAAATCCTCCACAGTTACACTCAAATCTATTATATATACAGC 1680
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 GATACAGACGTCAATCACGGTTGGTGTCAGAAGCTCAGTATTTCTTTACAAACATCTTAT 1740
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 CCGCTGAGTCTTTCATCTGGAACATTGATGGGGAATCATTATCAATGGATGAACGAGATT 1800
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 TCCAAAAGAAGATGGACTTGGCAAGGGAACGCATGTTGGGATTATCAGCTAGCTCAGAGA 1860
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 ATCAGGACAACCAAAACAATCTTGATGTACGGGAGCAAAAATCACAAACACTGAAAGCTA 1920
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 GCAGGGATTCTGATGTCAATCTCTCTTTGAAAGATAATTTCCAAGGTCCTGGACTGGAAA 1980
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 TGAGAAGGGACAGTGATGCAAGTAGTAACCCAGTTGAGCGTGTGCAATCGATTTCTGATT 2040
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 TGGAGAAGAAAGGAGCAGCCGAGCTTCTCAAGGATGATGACTTGAACAAAAAAATTCAAG 2100
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 AGTACCCATTCCTTTTTGCCCGCTCTGGTGATCTGACTGTTGCTGATGTAGAAAACCTTT 2160
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 TAAACTCCTACAAGCAGCTAGTACTAAAGTATGTAGCGCTTTCGCAAGGGATGGGTATCA 2220
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 ACCTTGAAAACCCTCCTGTTCAGAGCATGCAAACTGTTTCTGATCTTGTGGAATCTGAGG 2280
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ------------------------------------------------------------
consensus_8540#0 AGCCTAAAAATGTGAAGAATGCAGTAAATTTCAGCGAAGGAAGCAGCAAAACCAGTGATG 2340
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ----------------GAATGCAGTAAATTTCAGCGAAGGAAGCAGCAAAACCAGTGATG 44
consensus_8540#0 ACATAAAAAATGATACTCTTTATTCAGAAGTAGACAACACGGGTACCCAACAAACTGCGG 2400
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 ACATAAAAAATGATACTCTTTATTCAGAAGTAGACAACACGGGTACCCAACAAACTGCGG 104
consensus_8540#0 TTGACCCAAGTTATCAGAAGGCACAGCAGGATGAAGCATCAGATCAACCTGAACATGCAT 2460
consensus_8540#2 ----------------------------------------AGATCAACCTGAACATGCAT 20
consensus_8540#1 TTGACCCAAGTTATCAGAAGGCACAGCAGGATGAAGCATCAGATCAACCTGAACATGCAT 164
********************
consensus_8540#0 GAGTTGTTGGTCAAGTATGGTTGGCCGTCGAAATACAGGGAAAACGTTGTCAACGGCGGG 2520
consensus_8540#2 GAGTTGTTG-TCAAGTATGGTTG-CCGTCGAAATACAGGGAAAACGTTGTCAACGGCGGG 78
consensus_8540#1 GAGTTGTTGGTCAAGTATGGTTGGCCGTCGAAATACAGGGAAAACGTTGTCAACGGCGGG 224
********* ************* ************************************
consensus_8540#0 TCATTCTCTTATATCAAGGGGTGACAACTGGTTACAGAGAAGTGGGTGCATTGCTGTGCT 2580
consensus_8540#2 TCATTCTCTTATATCAAGGGGTGACAACTGGTTACAGAGAAGTGGGT-CATTGCTGTGCT 137
consensus_8540#1 TCATTCTCTTATATCAAGGGGTGACAACTGGTTACAGAGAAGTGGGTGCATTGCTGTGCT 284
*********************************************** ************
consensus_8540#0 CCTGAAGCCA-CAAAATGTAAATGCTGGAAACTAGAATATAGAGATTCAAGTCCC-TGGA 2638
consensus_8540#2 CCTGAAGCCAACAAAATGTAAATGCTGGAAACTAGAATATAGAGATTCAAGTCCCCTGGA 197
consensus_8540#1 CCTGAAGCCA-CAAAATGTAAATGCTGGAAACTAGAATATAGAGATTCAAGTCCC-TGGA 342
********** ******************************************** ****
consensus_8540#0 AACTAGAATATAGAGATTCTCTTATATCAGCGTCGAGGAAGATCAAGATTCATTCTGCTG 2698
consensus_8540#2 AACTAGAATATAGAGATTCTCTTATATCAGCGTCGAGGAAGATCAAGATTCATTCTGCTG 257
consensus_8540#1 AACTAGAATATAGAGATTCTCTTATATCAGCGTCGAGGAAGATCAAGATTCATTCTGCTG 402
************************************************************
consensus_8540#0 AAGCAAAGCTCCTTGTCCCGACGTTCGTTCATTGATCCTTTGGTTATGGACTCTTCAAGT 2758
consensus_8540#2 AAGCAA-GCTCCTTGTCCCGACGTTCGTTCATTGATCCTTTGGTTATGGACTCTTCAAGT 316
consensus_8540#1 AAGCAAAGCTCCTTGTCCCGACGTTCGTTCATTGATCCTTTGGTTATGGACTCTTCAAGT 462
****** *****************************************************
consensus_8540#0 TTGATTTTGCGGTTAATACCATTTTGGTAAACCATTTTACTTTTGTAGTTCAAATTAAAA 2818
consensus_8540#2 TTGATTTT-CGGTTAATACCATTTTGGTAAACCATTTTACTTTTGTAGTTCAAATTAAAA 375
consensus_8540#1 TTGATTTTGCGGTTAATACCATTTTGGTAAACCATTTTACTTTTGTAGTTCAAATTAAAA 522
******** ***************************************************
consensus_8540#0 TATCCATATGTGAAATTAGATCCAAGAGAAAATGGCATGAAACATAATTTGATCGTCTTC 2878
consensus_8540#2 TATCCATATGTGAAATTAGATCCAAGAGAAAATGGCATGAAACATAATTTGATCGTCTAA 435
consensus_8540#1 TATCCATATGTGAAATTAGATCCAAGAGAAAATGGCATGAAACATAATTTGATGGTGTTC 582
***************************************************** ** *
consensus_8540#0 TAGTTGTTGTCTTTAGCTGCTAGTACTAGTGCATACCGATGTTCGTCTTCTACAGATTAG 2938
consensus_8540#2 AAAAAAAAA--------------------------------------------------- 444
consensus_8540#1 TAGTTGTTGTNTTTAA-----AACGCCGCCATCCATCGTCGC-CGGATCGGGGAAGCCGG 636
*
consensus_8540#0 TTATCACCGGTGT-TTTGAGCACCTCAACTTCATTTGTTTGGTTTAAATGGACATAATTT 2997
consensus_8540#2 ------------------------------------------------------------
consensus_8540#1 GGAGAGTCGGCGGGCTCGGATCAGCCGGATTCGGTCACGTTTTGTGGGAGGAGGAGAGAA 696
consensus_8540#0 CAGGGAACTATTCCTTCCCTGTCGATT 3024
consensus_8540#2 ---------------------------
consensus_8540#1 GGGGGAG-------------------- 703
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||