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Oryza sativa
cluster # 8560 cluster # 8560       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8560#0 length = 1211 sequences # 3  
consensus_8560#1 length = 842 sequences # 1  
consensus_8560#2 length = 429 sequences # 1  

consensusID : consensus_8560#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1211
fasta sequence
                              [AGAAAGGGAAGAGAGTGGGTGAGACCGTGAGAGAGGGGGATGGAGATGGAGGCGTCCGCCGCCGAGGGCGGAGCCGCGGCGGCGGCGCGGACGCTGCGGTGGGCGGGGCGCGCGGGGCACCTCGGGGGATTCCCGCGCGCCGCGGTGATCGCCGCCGTCGGGGCGGTCGCCAAGGCGTACGCGTCGCTGCTCAACACCACCACCGTCCACAACGCCGATGCCCTCCTCCGCCTCGTCTCCTCGCGGCCCCCCGGCACGCCGCTCCTCACCGTCAGCAACCACATGTCAACGATGGATGACCCACTTATGTGGGGATTCAAGGGTTTTCCAACTACAGATGCCAAACTTCAAAGATGGGTGTTGACAGCAGAGGACATCTGCTTCAGGAATGTGTTCATGTCTTACATATTTCGACTTGGGAAATGTGTGCCGATCACACGAGGTGCTGGAATTTATCAGGATCATATGACTGAAGCCCTTGAAGTGCTTAGCACTGGAGACTGGGAAAAATAGCTCAAGATGATCAGCCAATCAGACGTCTGAAGTGGGGAACTGCCAATCTTATCGTCCGAGCACCAGTAACTCCAATTGTTTTGCCTATTGTGCATTCTGGCTTTGAAAAGGTCATGCCAGAGAAATCATTTTTTGGGCGTCGACCGCCAGTGCCTCTTTGGAACAAGGAGATACATATCATCGTTGGAGAGCCAGTGGAGTTTGATCTGCCAAGCTTGAAGCAGGCAGCAAGAACAGTACCTCAGGATTCATCTTTTGAAAGGAAGGGTTGGCCAAGCATCATGCCAGACGGACTAGATGAAGCGGCTCAGAGATGGCTTTACCAGAAGATATCAGATAAGATCCAATCAGTTATGGAGACATTGCGGAAGAGACTTCTCGACCTGAAGCAACATTGATATTTGGCTGTTTACTTGCAATCCAAGGAGGCACCTCCTTTTTTTGAACAATACCTTCTTGAAATGGTAGAATATATAGCTTCATTGAACAGTTTCAGATGATGCAAAGACGATTGAGAGTAGGCAGTGGACGCTACGTCTGTTGGGGTGAAAATTTGAGACGACGGTGAGAGATAGAACTCAGCATGTTAGATTACGAGGCATTTCTTTTTCAGTAGGTCAAGAATATTTGTCAAGCGCCTACTTTTCTTTTTATTGTTTGGAATGGTTTGCCATGTTTACGAGGCATGAATAAAGTCA]

[+] EMBL AK069874             [AGAAAGGGAAGAGAGTGGGTGAGACCGTGAGAGAGGGGGATGGAGATGGAGGCGTCCGCCGCCGAGGGCGGAGCCGCGGCGGCGGCGCGGACGCTGCGGTGGGCGGGGCGCGCGGGGCACCTCGGGGGATTCCCGCGCGCCGCGGTGATCGCCGCCGTCGGGGCGGTCGCCAAGGCGTACGCGTCGCTGCTCAACACCACCACCGTCCACAACGCCGATGCCCTCCTCCGCCTCGTCTCCTCGCGGCCCCCCGGCACGCCGCTCCTCACCGTCAGCAACCACATGTCAACGATGGATGACCCACTTATGTGGGGATTCAAGGGTTTTCCAACTACAGATGCCAAACTTCAAAGATGGGTGTTGACAGCAGAGGACATCTGCTTCAGGAATGTGTTCATGTCTTACATATTTCGACTTGGGAAATGTGTGCCGATCACACGAGGTGCTGGAATTTATCAGGATCATATGACTGAAGCCCTTGAAGTGCTTAGCACTGGAGACTGGGAAAAATAGCTCAAGATGATCAGCCAATCAGACGTCTGAAGTGGGGAACTGCCAATCTTATCGTCCGAGCACCAGTAACTCCAATTGTTTTGCCTATTGTGCATTCTGGCTTTGAAAAGGTCATGCCAGAGAAATCATTTTTTGGGCGTCGACCGCCAGTGCCTCTTTGGAACAAGGAGATACATATCATCGTTGGAGAGCCAGTGGAGTTTGATCTGCCAAGCTTGAAGCAGGCAGCAAGAACAGTACCTCAGGATTCATCTTTTGAAAGGAAGGGTTGGCCAAGCATCATGCCAGACGGACTAGATGAAGCGGCTCAGAGATGGCTTTACCAGAAGATATCAGATAAGATCCAATCAGTTATGGAGACATTGCGGAAGAGACTTCTCGACCTGAAGCAACATTGATATTTGGCTGTTTACTTGCAATCCAAGGAGGCACCTCCTTTTTTTGAACAATACCTTCTTGAAATGGTAGAATATATAGCTTCATTGAACAGTTTCAGATGATGCAAAGACGATTGAGAGTAGGCAGTGGACGCTACATCTGTTGAGGTGAAAATTTGAGACGACGGTGAGAGATAGAACTCAGCATGTTAGATTACGAGGCATTTCTTTTTCAGTAGGTCAAGAATATTTGTCAAGCGCCTACTTTTCTTTTTATTGTTTGGAATGGTTTGCCATGTTTACGAGGCATGAATAAAGTCA]
[-] EMBL BI305706             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGTAGGCTGTGGACGCTACGTCTGTTGGGGTGAAAATTTGAGACGACGGTGAGAGATAGAACTCAGCATGTTAGATTACGAGGCATTTCTTTTTCAGTAGGTCAAGAATATTTGTCAAGCGCCTACTaaa                                                    ]
[-] EMBL CB965185             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGGACGCTACGTCTGTTGGGGTGAAAATTTGAGACGACGGTGAGAGATAGAACTCAGCATGTTAGATTACGAGGCATTTCTTTTTCAGTAGGTCAAGAATA TTGTCAg                                                                ]


>consensus_8560#0 AGAAAGGGAAGAGAGTGGGTGAGACCGTGAGAGAGGGGGATGGAGATGGAGGCGTCCGCC GCCGAGGGCGGAGCCGCGGCGGCGGCGCGGACGCTGCGGTGGGCGGGGCGCGCGGGGCAC CTCGGGGGATTCCCGCGCGCCGCGGTGATCGCCGCCGTCGGGGCGGTCGCCAAGGCGTAC GCGTCGCTGCTCAACACCACCACCGTCCACAACGCCGATGCCCTCCTCCGCCTCGTCTCC TCGCGGCCCCCCGGCACGCCGCTCCTCACCGTCAGCAACCACATGTCAACGATGGATGAC CCACTTATGTGGGGATTCAAGGGTTTTCCAACTACAGATGCCAAACTTCAAAGATGGGTG TTGACAGCAGAGGACATCTGCTTCAGGAATGTGTTCATGTCTTACATATTTCGACTTGGG AAATGTGTGCCGATCACACGAGGTGCTGGAATTTATCAGGATCATATGACTGAAGCCCTT GAAGTGCTTAGCACTGGAGACTGGGAAAAATAGCTCAAGATGATCAGCCAATCAGACGTC TGAAGTGGGGAACTGCCAATCTTATCGTCCGAGCACCAGTAACTCCAATTGTTTTGCCTA TTGTGCATTCTGGCTTTGAAAAGGTCATGCCAGAGAAATCATTTTTTGGGCGTCGACCGC CAGTGCCTCTTTGGAACAAGGAGATACATATCATCGTTGGAGAGCCAGTGGAGTTTGATC TGCCAAGCTTGAAGCAGGCAGCAAGAACAGTACCTCAGGATTCATCTTTTGAAAGGAAGG GTTGGCCAAGCATCATGCCAGACGGACTAGATGAAGCGGCTCAGAGATGGCTTTACCAGA AGATATCAGATAAGATCCAATCAGTTATGGAGACATTGCGGAAGAGACTTCTCGACCTGA AGCAACATTGATATTTGGCTGTTTACTTGCAATCCAAGGAGGCACCTCCTTTTTTTGAAC AATACCTTCTTGAAATGGTAGAATATATAGCTTCATTGAACAGTTTCAGATGATGCAAAG ACGATTGAGAGTAGGCAGTGGACGCTACGTCTGTTGGGGTGAAAATTTGAGACGACGGTG AGAGATAGAACTCAGCATGTTAGATTACGAGGCATTTCTTTTTCAGTAGGTCAAGAATAT TTGTCAAGCGCCTACTTTTCTTTTTATTGTTTGGAATGGTTTGCCATGTTTACGAGGCAT GAATAAAGTCA



consensusID : consensus_8560#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 842
fasta sequence
                              [ACACCACCACCGTCCACAACGCTGATGCCCTCCTCCGCCTCGTCTCCTCGCGGCCCCCCGGCACGCCGCTCCTCACCGTCAGCAACCACATGTCAACGATGGATGACCCACTTATGTGGGGATGCAAGGGTTTTCCAACTACAGATGCCAAACTTCAAAGATGGGTGTTGACAGCAGAGGACATCTGCTTCAGGAATGTGTCCATGTCTTACATATCCTCGACTGGGGAAATGTGTGCCGATCACACGAGGTGCTGGAATGAATCAGGATCATATGACTGAAGCCCTGGAAGTGCTTAGCACTGGAGACTGGGAAAAATACCTCAGGATGATCAGCCAATCAGACGTCTGAAGTGGGGAACTGCCATTCTTATCGTCCGAGCACCATTAACTCCATTGGTTTTGCCTATGGTGCATCCTGGCTTCAAAAAGGTCTTGCCAGAGAAATCCTTTTTTGGGGCTTTAACCCCCAAGTTCATCTTTTGGAACCGGGGAGATTCTTTTTTATCGTGGGACAACCCGTTGGATTTTGATCCTGCCATCCATAAACCGGCCTCCATACACTATACCTTGGGATCGTTCTTTTTAAAGGAATGGTTGGCCCACCTTTCGTGCGCAACTGCAAAAATTTACTAGGCAAAATGTGCTTGACTAAATAGTTCTGATGCATCCAATGCGTTTGGAGAAGTCCCGAACGATTGTCGACTCTCCTANCTTGTATTCGTATATCCCCACCTACTAGACAGCACCTAGTGTGAACGCTCTTTCAAACCGTAGTTTCCGCCGTNAGCACCCGACGCGACACTAGCACCCCACGCACACTTGCAGCATCCCGCTCAGAGC]

[+] EMBL CA753372             [ACACCACCACCGTCCACAACGCTGATGCCCTCCTCCGCCTCGTCTCCTCGCGGCCCCCCGGCACGCCGCTCCTCACCGTCAGCAACCACATGTCAACGATGGATGACCCACTTATGTGGGGATGCAAGGGTTTTCCAACTACAGATGCCAAACTTCAAAGATGGGTGTTGACAGCAGAGGACATCTGCTTCAGGAATGTGTCCATGTCTTACATATCCTCGACTGGGGAAATGTGTGCCGATCACACGAGGTGCTGGAATGAATCAGGATCATATGACTGAAGCCCTGGAAGTGCTTAGCACTGGAGACTGGGAAAAATACCTCAGGATGATCAGCCAATCAGACGTCTGAAGTGGGGAACTGCCATTCTTATCGTCCGAGCACCATTAACTCCATTGGTTTTGCCTATGGTGCATCCTGGCTTCAAAAAGGTCTTGCCAGAGAAATCCTTTTTTGGGGCTTTAACCCCCAAGTTCATCTTTTGGAACCGGGGAGATTCTTTTTTATCGTGGGACAACCCGTTGGATTTTGATCCTGCCATCCATAAACCGGCCTCCATACACTATACCTTGGGATCGTTCTTTTTAAAGGAATGGTTGGCCCACCTTTCGTGCGCAACTGCAAAAATTTACTAGGCAAAATGTGCTTGACTAAATAGTTCTGATGCATCCAATGCGTTTGGAGAAGTCCCGAACGATTGTCGACTCTCCTANCTTGTATTCGTATATCCCCACCTACTAGACAGCACCTAGTGTGAACGCTCTTTCAAACCGTAGTTTCCGCCGTNAGCACCCGACGCGACACTAGCACCCCACGCACACTTGCAGCATCCCGCTCAGAGC]


>consensus_8560#1 ACACCACCACCGTCCACAACGCTGATGCCCTCCTCCGCCTCGTCTCCTCGCGGCCCCCCG GCACGCCGCTCCTCACCGTCAGCAACCACATGTCAACGATGGATGACCCACTTATGTGGG GATGCAAGGGTTTTCCAACTACAGATGCCAAACTTCAAAGATGGGTGTTGACAGCAGAGG ACATCTGCTTCAGGAATGTGTCCATGTCTTACATATCCTCGACTGGGGAAATGTGTGCCG ATCACACGAGGTGCTGGAATGAATCAGGATCATATGACTGAAGCCCTGGAAGTGCTTAGC ACTGGAGACTGGGAAAAATACCTCAGGATGATCAGCCAATCAGACGTCTGAAGTGGGGAA CTGCCATTCTTATCGTCCGAGCACCATTAACTCCATTGGTTTTGCCTATGGTGCATCCTG GCTTCAAAAAGGTCTTGCCAGAGAAATCCTTTTTTGGGGCTTTAACCCCCAAGTTCATCT TTTGGAACCGGGGAGATTCTTTTTTATCGTGGGACAACCCGTTGGATTTTGATCCTGCCA TCCATAAACCGGCCTCCATACACTATACCTTGGGATCGTTCTTTTTAAAGGAATGGTTGG CCCACCTTTCGTGCGCAACTGCAAAAATTTACTAGGCAAAATGTGCTTGACTAAATAGTT CTGATGCATCCAATGCGTTTGGAGAAGTCCCGAACGATTGTCGACTCTCCTANCTTGTAT TCGTATATCCCCACCTACTAGACAGCACCTAGTGTGAACGCTCTTTCAAACCGTAGTTTC CGCCGTNAGCACCCGACGCGACACTAGCACCCCACGCACACTTGCAGCATCCCGCTCAGA GC



consensusID : consensus_8560#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 429
fasta sequence
                              [TATTCAGATAAGATCCAATCAGGTTATGGAGNCATTGCGGAAAGAGACTTCTCGACCCTGAAGCCANCCATTGATATTTTGGCTGTTTNCTTGCAATCCCAAGGAGGGCNCCTCCTTTTTTTTGAANCAAATCCCTTCTTTGAAATGGTAGAATATATAGCTTTCATTGANCAGGTTTCAGATGATGCAAAAGCCGATTGAGAGGTAGGCAGTGGGCCGCTACATCTGTTGAGGGTGAAAAATTTGAGACGACGGGTGAGAGATAGAACTCAGCATGTTTAGATTACGAGGCATTTCTTTTTTCAGTAGGCCAAGAATATTTTGTCAAGCGCCTACTTTTCTTTTTATTGTTGGAATGGTTTGCCATGTTTACGAGGCATGAATAAAGTCATCGCCTATTCAACTTGTTAGATGTTCTAAAAAAAAAAA]

[+] EMBL AU166963             [TATTCAGATAAGATCCAATCAGGTTATGGAGNCATTGCGGAAAGAGACTTCTCGACCCTGAAGCCANCCATTGATATTTTGGCTGTTTNCTTGCAATCCCAAGGAGGGCNCCTCCTTTTTTTTGAANCAAATCCCTTCTTTGAAATGGTAGAATATATAGCTTTCATTGANCAGGTTTCAGATGATGCAAAAGCCGATTGAGAGGTAGGCAGTGGGCCGCTACATCTGTTGAGGGTGAAAAATTTGAGACGACGGGTGAGAGATAGAACTCAGCATGTTTAGATTACGAGGCATTTCTTTTTTCAGTAGGCCAAGAATATTTTGTCAAGCGCCTACTTTTCTTTTTATTGTTGGAATGGTTTGCCATGTTTACGAGGCATGAATAAAGTCATCGCCTATTCAACTTGTTAGATGTTCTAAAAAAAAAAA]


>consensus_8560#2 TATTCAGATAAGATCCAATCAGGTTATGGAGNCATTGCGGAAAGAGACTTCTCGACCCTG AAGCCANCCATTGATATTTTGGCTGTTTNCTTGCAATCCCAAGGAGGGCNCCTCCTTTTT TTTGAANCAAATCCCTTCTTTGAAATGGTAGAATATATAGCTTTCATTGANCAGGTTTCA GATGATGCAAAAGCCGATTGAGAGGTAGGCAGTGGGCCGCTACATCTGTTGAGGGTGAAA AATTTGAGACGACGGGTGAGAGATAGAACTCAGCATGTTTAGATTACGAGGCATTTCTTT TTTCAGTAGGCCAAGAATATTTTGTCAAGCGCCTACTTTTCTTTTTATTGTTGGAATGGT TTGCCATGTTTACGAGGCATGAATAAAGTCATCGCCTATTCAACTTGTTAGATGTTCTAA AAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8560#0      AGAAAGGGAAGAGAGTGGGTGAGACCGTGAGAGAGGGGGATGGAGATGGAGGCGTCCGCC 60
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      ------------------------------------------------------------
                                                                                  

consensus_8560#0      GCCGAGGGCGGAGCCGCGGCGGCGGCGCGGACGCTGCGGTGGGCGGGGCGCGCGGGGCAC 120
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      ------------------------------------------------------------
                                                                                  

consensus_8560#0      CTCGGGGGATTCCCGCGCGCCGCGGTGATCGCCGCCGTCGGGGCGGTCGCCAAGGCGTAC 180
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      ------------------------------------------------------------
                                                                                  

consensus_8560#0      GCGTCGCTGCTCAACACCACCACCGTCCACAACGCCGATGCCCTCCTCCGCCTCGTCTCC 240
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      ------------------------------------------------------------
                                                                                  

consensus_8560#0      TCGCGGCCCCCCGGCACGCCGCTCCTCACCGTCAGCAACCACATGTCAACGATGGATGAC 300
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      ------------------------------------------------------------
                                                                                  

consensus_8560#0      CCACTTATGTGGGGATTCAAGGGTTTTCCAACTACAGATGCCAAACTTCAAAGATGGGTG 360
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      ------------------------------------------------------------
                                                                                  

consensus_8560#0      TTGACAGCAGAGGACATCTGCTTCAGGAATGTGTTCATGTCTTACATATTTCGACTTGGG 420
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      ------------------------------------------------------------
                                                                                  

consensus_8560#0      AAATGTGTGCCGATCACACGAGGTGCTGGAATTTATCAGGATCATATGACTGAAGCCCTT 480
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      ------------------------------------------------------------
                                                                                  

consensus_8560#0      GAAGTGCTTAGCACTGGAGACTGGGAAAAATAGCTCAAGATGATCAGCCAATCAGACGTC 540
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      ------------------------------------------------------------
                                                                                  

consensus_8560#0      TGAAGTGGGGAACTGCCAATCTTATCGTCCGAGCACCAGTAACTCCAATTGTTTTGCCTA 600
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      ------------------------------------------------------------
                                                                                  

consensus_8560#0      TTGTGCATTCTGGCTTTGAAAAGGTCATGCCAGAGAAATCATTTTTTGGGCGTCGACCGC 660
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      -----ACACCACCACCGTCCACAACGCTGATGCCCTCCTCCGCCTCGTCTCCTCGCGGCC 55
                                                                                  

consensus_8560#0      CAGTGCCTCTTTGGAACAAGGAGATACATATCATCGTTGGAGAGCCAGTGGAGTTTGATC 720
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      CCCCGGCACGCCGCTCCTCACCGTCAGCAACCACATGTCAACGATGGATGACCCACTTAT 115
                                                                                  

consensus_8560#0      TGCCAAGCTTGAAGCAGGCAGCAAGAACAGTACCTCAGGATTCATCTTTTGAAAGGAAGG 780
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      GTGGGGATGCAAGGGTTTTCCAACTACAGATGCCAAACTTCAAAGATGGGTGTTGACAGC 175
                                                                                  

consensus_8560#0      GTTGGCCAAGCATCATGCCAGACGGACTAGATGAAGCGGCTCAGAGATGGCTTTACCAGA 840
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      AGAGGACATCTGCTTCAGGAATGTGTCCATGTCTTACATATCCTCGACTGGGGAAATGTG 235
                                                                                  

consensus_8560#0      AGATAT-CAGATAAGATCC--AATCAG-TTATGGAGACATTGCGGAA-----GAGACTTC 891
consensus_8560#2      ---TATTCAGATAAGATCC--AATCAGGTTATGGAGNCATTGCGGAAA----GAGACTTC 51
consensus_8560#1      TGCCGATCACACGAGGTGCTGGAATGAATCAGGATCATATGACTGAAGCCCTGGAAGTGC 295
                             ** *  ** * *   *     * * *     **  * ***     *  * * *

consensus_8560#0      TCGACC-TGAAGCAAC--ATTGATATTT-GG------CTGTTTACTTGCAATCC--AAGG 939
consensus_8560#2      TCGACCCTGAAGCCANCCATTGATATTTTGG------CTGTTTNCTTGCAATCCCAAGGA 105
consensus_8560#1      TTAGCACTGGAGACTGGGAAAAATACCTCAGGATGATCAGCCAATCAGACGTCTGAAGTG 355
                      *   *  ** **      *   ***  *  *      * *       *   **   *   

consensus_8560#0      AGGCACCTCCTTTTTTT-GAAC--AATACC------TTCTT-GAAATGGTAGAATATATA 989
consensus_8560#2      GGGCNCCTCCTTTTTTTTGAANCAAATCCC------TTCTTTGAAATGGTAGAATATATA 159
consensus_8560#1      GGGAACTGCCATTCTTATCGTCCGAGCACCATTAACTCCATTGGTTTTGCCTATGGTGCA 415
                       **  *  ** ** **        *   **      * * * *   * *   *   *  *

consensus_8560#0      GCTT-CATTGAACAG-TTTCAGATGATGCAAAGAC-GATTGAGAG-TAGGCAGTGGAC-G 1044
consensus_8560#2      GCTTTCATTGANCAGGTTTCAGATGATGCAAAAGCCGATTGAGAGGTAGGCAGTGGGCCG 219
consensus_8560#1      TCCTGGCTTCAAAAAGGTCTTGCCAGAGAAATCCTTTTTTGGGGCTTTAACCCCCAAGTT 475
                       * *   ** *  *   *   *     * **       *** *   *   *         

consensus_8560#0      CTACGTCTGTTG-GGGTGAAAA-TTT---------GAGACGACGG-TGAGAGATAGAACT 1092
consensus_8560#2      CTACATCTGTTGAGGGTGAAAAATTT---------GAGACGACGGGTGAGAGATAGAACT 270
consensus_8560#1      CATCTTTTGGAACCGGGGAGATTCTTTTTTATCGTGGGACAACCCGTTGGATTTTGATCC 535
                      *  * * **     ** ** *   **         * *** **   *  **  * ** * 

consensus_8560#0      CAGCATGTT-AGATTACGAGGCATTTCTTTTT-CAGTAGGTCAAGAATATTT-GTCAAGC 1149
consensus_8560#2      CAGCATGTTTAGATTACGAGGCATTTCTTTTTTCAGTAGGCCAAGAATATTTTGTCAAGC 330
consensus_8560#1      TGCCATCCATAAACCGGCCTCCATACACTATA-CCTTGGGATCGTTCTTTTTAAAGGAAT 594
                         ***    * *        ***    * *  *  * **       * ***     *  

consensus_8560#0      GCCTACTTTTCTTTTTAT---TGTTTGGAATGGTTTGCCATGTTTACGAGGCATGAATAA 1206
consensus_8560#2      GCCTACTTTTCTTTTTAT---TGTT-GGAATGGTTTGCCATGTTTACGAGGCATGAATAA 386
consensus_8560#1      GGTTGGCCCACCTTTCGTGCGCAACTGCAAAAATTTACTAGGCAAAATGTGCTTGACTAA 654
                      *  *      * ***  *        * **   *** * * *   *    ** *** ***

consensus_8560#0      A--GTCA----------------------------------------------------- 1211
consensus_8560#2      A--GTCATCGCCTATTCAACTTGTT---AGATGTTCTAAAAAAAAAAA------------ 429
consensus_8560#1      ATAGTTCTGATGCATCCAATGCGTTTGGAGAAGTCCCGAACGATTGTCGACTCTCCTANC 714
                      *  **                                                       

consensus_8560#0      ------------------------------------------------------------
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      TTGTATTCGTATATCCCCACCTACTAGACAGCACCTAGTGTGAACGCTCTTTCAAACCGT 774
                                                                                  

consensus_8560#0      ------------------------------------------------------------
consensus_8560#2      ------------------------------------------------------------
consensus_8560#1      AGTTTCCGCCGTNAGCACCCGACGCGACACTAGCACCCCACGCACACTTGCAGCATCCCG 834
                                                                                  

consensus_8560#0      --------
consensus_8560#2      --------
consensus_8560#1      CTCAGAGC 842
                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)