These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8571#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1571 fasta sequence [CCAAAAGACTCGGGAGAAGAGATCTAACAGTCAACTCGTAAAATACTCCCTACGTTTCATATTTTAAATTATTTGACTTTTTTTAGTTAAACTTGTTAAAGCCTATGTTTATAAAAAATATATTAGTATTTTAACATAAAATAAACATATTATAAAAATATGTTTGAGAGTAGAAACAGCCGGCGAAGCGTGACGATGGACGCTCGACGGCGGCGGCTGTCCCCGGTGGTGGTCGTAGCGGCTTTTCTTTTCTTCCCCCTGTTCTTCGGGAGCCAGCCGGCGGCGGCGTACGGCGAGGCTTCAGGCGCCGGCGGCATGACGGCACTGCAGAAGCACGCGGCGTTCTTCGACAAGGACAATGACGGCTTCGTCTCCCCGACCGAGACATACGACGGGTTACGCGCCCTCGGACTTGGAGCTGGCTTCTCCATCTTAAGCGCTGCGTTGATCAATGGCGTACTTTCACTCAAGACCAGACCTCGCGGATATCTGGACACAGAGGCCACACGCCGTCGAGACTCGAGAGATTCAGGAACAGAAACCGCCGAGAGAGTTCGTAGCAGTCAACGCGCGAGGCAGGGCCGAGAAGAAACCGCCGGCGACGCACGCGCGATGGACGCTCGGCGGAGGCGGTTGTCCCCGGCGGTGGCCGTGGCGGCGGCTCTTCTTTTCTTCCCCATGTTCTTCGGGAGCCATACGCCGGCGGCGGCGGCGGCGTACGGAGAGGCTTCAGGCGACGCCGGCGTGACGGCGCTGCAGAAGCACGCGGCGTTCTTCGACAAGGACGGCGACGGCATCGTCTCCCTCTCCGAGACATACGACGGGTTACGAGCACTCGGACTCGGGTCTGGCCTCTCCAGCTTGAGCGCCGCCTTCATCAATGGCGTCCTTTCCCCAAAGACCAGACCTGACAATGGAACAGCACCACGCTTATCTATCTACATAGA-GAACATCTACAAGGGGATTCATGGAAGCGATTCAAGCGCCTATGATTCTGAAGGAAGGTTCGTTGCTGAAAAGTTTGAGGAGATATTCGCCAAGCACGCCAAGACCGTGCCTGATGCTCTGACATCGGACGAGATAGACGAGCTGCTTCAAGCGAACCGCAAGCCCGGTGACTACACTGGATGGGTCGCAGCATCGTCAGAGTGGAAGATTCTGTACAAGATCGGCAAGGACAAGGACGGCCTTCTTCGCAAGGAGGCCGTGCGAGAAGTCTACGATGGAAGCCTGTTTACCAAGCTGGCGGCGGCAAGGATAAACGACGAAAACCAAGCATGATTGGTGACAGCTGA-TGGGATCATCT-CCATTGATTCTCCTGATTAAGCATCTCAAATCATGTGCCACTGTGATATGAGAACGATTGAGATGATGTCTGAACACAAAAAGATAGTCATGCAAGATAGAAGTATGAACAAGTGTGGACAGAATCTGCAGATGGGGATGGATCGTTTAGTTCTGTCCTTTTTTGTTGGTTTCTTGGGGATATTGAATGTTTATATTATTATACCTGCAAATGGTTGGCAGTGCAAGGCTGCAAGCAATGGCACACTATTTATACAAAAAAAAAA] [+] EMBL AK070347 [CCAAAAGACTCGGGAGAAGAGATCTAACAGTCAACTCGTAAAATACTCCCTACGTTTCATATTTTAAATTATTTGACTTTTTTTAGTTAAACTTGTTAAAGCCTATGTTTATAAAAAATATATTAGTATTTTAACATAAAATAAACATATTATAAAAATATGTTTGAGAGTAGAAACAGCCGGCGAAGCGTGACGATGGACGCTCGACGGCGGCGGCTGTCCCCGGTGGTGGTCGTAGCGGCTTTTCTTTTCTTCCCCCTGTTCTTCGGGAGCCAGCCGGCGGCGGCGTACGGCGAGGCTTCAGGCGCCGGCGGCATGACGGCACTGCAGAAGCACGCGGCGTTCTTCGACAAGGACAATGACGGCTTCGTCTCCCCGACCGAGACATACGACGGGTTACGCGCCCTCGGACTTGGAGCTGGCTTCTCCATCTTAAGCGCTGCGTTGATCAATGGCGTACTTTCACTCAAGACCAGACCTCGCGGATATCTGGACACAGAGGCCACACGCCGTCGAGACTCGAGAGATTCAGGAACAGAAACCGCCGAGAGAGTTCGTAGCAGTCAACGCGCGAGGCAGAGCCGAGAAGAAACCGCCGGCGACGCACGCGCGATGGACGCTCGGCGGAGGCGGTTGTCCCCGGCGGTGGCCGTGGCGGCGGCTCTTCTTTTCTTCCCCATGTTCTTCGGGAGCCATACGCCGGCGGCGGCGGCGGCGTACGGAGAGGCTTCAGGCGACGCCGGCGTGACGGCGCTGCAGAAGCACGCGGCGTTCTTCGACAAGGACGGCGACGGCATCGTCTCCCTCTCCGAGACATACGACGGGTTACGAGCACTCGGACTCGGGTCTGGCCTCTCCAGCTTGAGCGCCGCCTTCATCAATGGCGTCCTTTCCCCAAAGACCAGACCTGACAATGGAACAGCACCACGCTTATCTATCTACATAGA GAACATCTACAAGGGGATTCATGGAAGCGATTCAAGCGCCTATGATTCTGAAGGAAGGTTCGTTGCTGAAAAGTTTGAGGAGATATTCGCCAAGCACGCCAAGACCGTGCCTGATGCTCTGACATCGGACGAGATAGACGAGCTGCTTCAAGCGAACCGCAAGCCCGGTGACTACACTGGATGGGTCGCAGCATCGTCAGAGTGGAAGATTCTGTACAAGATCGGCAAGGACAAGGACGGCCTTCTTCGCAAGGAGGCCGTGCGAGAAGTCTACGATGGAAGCCTGTTTACCAAGCTGGCGGCGGCAAGGATAAACGACGAAAACCAAGCATGATTGGTGACAGCTGA TGGGATCATCT CCATTGATTCTCCTGATTAAGCATCTCAAATCATGTGCCACTGTGATATGAGAACGATTGAGATGATGTCTGAACACAAAAAGATAGTCATGCAAGATAGAAGTATGAACAAGTGTGGACAGAATCTGCAGATGGGGATGGATCGTTTAGTTCTGTCCTTTTTTGTTGGTTTCTTGGGGATATTGAATGTTTATATTATTATACCTGCAAATGGTTGGCAGTGCAAGGCTGCAAGCAATGGCA ] [+] EMBL AK104748 [ TCGAGACTCGAGAGATTCAGGAACAGAAACCGCCGAGAGAGTTCGTAGCAGTCAACGCGCGAGGCAGGGCCGAGAAGAAACCGCCGGCGACGCACGCGCGATGGACGCTCGGCGGAGGCGGTTGTCCCCGGCGGTGGCCGTGGCGGCGGCTCTTCTTTTCTTCCCCATGTTCTTCGGGAGCCATACGCCGGCGGCGGCGGCGGCGTACGGAGAGGCTTCAGGCGACGCCGGCGTGACGGCGCTGCAGAAGCACGCGGCGTTCTTCGACAAGGACGGCGACGGCATCGTCTCCCTCTCCGAGACATACGACGGGTTACGAGCACTCGGACTCGGGTCTGGCCTCTCCAGCTTGAGCGCCGCCTTCATCAATGGCGTCCTTTCCCCAAAGACCAGACCTGACAATGGAACAGCACCACGCTTATCTATCTACATAGA GAACATCTACAAGGGGATTCATGGAAGCGATTCAAGCGCCTATGATTCTGAAGGAAGGTTCGTTGCTGAAAAGTTTGAGGAGATATTCGCCAAGCACGCCAAGACCGTGCCTGATGCTCTGACATCGGACGAGATAGACGAGCTGCTTCAAGCGAACCGCAAGCCCGGTGACTACACTGGATGGGTCGCAGCATCGTCAGAGTGGAAGATTCTGTACAAGATCGGCAAGGACAAGGACGGCCTTCTTCGCAAGGAGGCCGTGCGAGAAGTCTACGATGGAAGCCTGTTTACCAAGCTGGCGGCGGCAAGGATAAACGACGAAAACCAAGCATGATTGGTGACAGCTGA TGGGATCATCT CCATTGATTCTCCTGATTAAGCATCTCAAATCATGTGCCACTGTGATATGAGAACGATTGAGATGATGTCTGAACACAAAAAGATAGTCATGCAAGATAGAAGTATGAACAAGTGTGGACAGAATCTGCAGATGGGGATGGATCGTTTAGTTCTGTCCTTTTTTGTTGGTTTCTTGGGGATATTGAATGTTTATATTATTATACCTGCAAATGGTTGGCAGTGCAAGGCTGCAAGCAATGGCACA ] [+] EMBL OSS11405A [ GAGAGAGTTCGTAGCAGTCAACGCGCGAGGCAGGGCCGAGAAGAAACCGCCGGCGACGCACGCGCGATGGACGCTCGGCGGAGGCGGTTGTCCCCGGCGGTGGCCGTGGCGGCGGCTCTTCTTTTCTTCCCCATGTTCTTCGGGAGCCATACGCCGGCGG GGCGGCGGCGTACGGAGAGGCTTCAGGCGACGNCGGCGTGACGGCGCTGCAGAAGCACGCGGCGTTCTTCGACAAGGACGGCGACGGCATCGTCTCCCTCTCCGAGACATACGACGGGTTACGAGCACTCGGACTCGGGTCTGGCCT ] [+] EMBL AU088653 [ tTTCATCAATGGCGTCCTTTCCCCAAAGACCAGACCTGACAATGGAACAGCACCACGCTTATCTATCTACATAGAGGAACATCTACAAGGGGATTCATGGAAGCGATTCAAGCGCCTATGATTCTGAAGGAAGGTTCGTTGCTGAAAAGTTTGAGGAGATATTCGCCAAGCACGCCAAGACCGTGCCTGATGCTCTGACATCGGACGAGATAGACGAGCTGCTTCAAGCGAACCGCAAGCCCGGTGACTACACTGGATGGGTCGCAGCATCGTCAGAGTGGAAGATTCTGTACAAGATCGGCAAGGACAAGGACGGCCTTCTTCGCAAGGAGGCCGTGCGAGAAGTCTACGATGGAAGCCTGTTTACCAAGCTGGCGGCGGCAAGGATAAACGACGAAANCCAAGCATGATTGGTGACAGCTGA TGGGATCATCT CCATTGATTCTCCTGATTAAGCATCTCAAATCATGTGCCACTGTGATATGAGAACGATTGAGATGATGTCTGAACACAAAAAGATAGTCATGCAAGATAGAAGTATGAACAAGTGTGGACAGAATCTGCAGATGGGGATGGATCGTTTAGTTCTGTCCTTTTTTGTTGGTTTCTTGGGGATATTGAATGTTTATATTATTATACCTGCAAATGGTTGGCAGTGCAAGGCTGCAAGCAATGGCACACTATTTATACAAAAAAAAAA] [+] EMBL C72370 [ TTCAAGCGCCTATGATTCTGAAGGAAGGTTCGTTGCTGAAAAGTTTGAGGAGATATTCGCCAAGCACGCCAAGACCGTGCCTGATGCTCTGACATCGGACGAGATAGACGAGCTGCTTCAAGCGAACCGCAAGCCCGGTGACTACACTGGATGGGTCGCAGCATCGTCAGAGTGGAAGATTCTGTACAAGATCGGCAAGGACAAGGACGGCCTTCTTCGCAAGGAGGCCGTGCGAGAAGTCTACGATGGAAGCCTGTTTACCAAGCTGGCGGCGGCAAGGATAAACGACGAAAACCAAGCATGATTGGTGACAGCTGATTGGGATCATCTCCCATTGATTCTCCTGATTAAGCATCTCAAATCATGGNGCACTGTGNTATG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||