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Oryza sativa
cluster # 8571 cluster # 8571       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8571#0 length = 1571 sequences # 5  

consensusID : consensus_8571#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1571
fasta sequence
                              [CCAAAAGACTCGGGAGAAGAGATCTAACAGTCAACTCGTAAAATACTCCCTACGTTTCATATTTTAAATTATTTGACTTTTTTTAGTTAAACTTGTTAAAGCCTATGTTTATAAAAAATATATTAGTATTTTAACATAAAATAAACATATTATAAAAATATGTTTGAGAGTAGAAACAGCCGGCGAAGCGTGACGATGGACGCTCGACGGCGGCGGCTGTCCCCGGTGGTGGTCGTAGCGGCTTTTCTTTTCTTCCCCCTGTTCTTCGGGAGCCAGCCGGCGGCGGCGTACGGCGAGGCTTCAGGCGCCGGCGGCATGACGGCACTGCAGAAGCACGCGGCGTTCTTCGACAAGGACAATGACGGCTTCGTCTCCCCGACCGAGACATACGACGGGTTACGCGCCCTCGGACTTGGAGCTGGCTTCTCCATCTTAAGCGCTGCGTTGATCAATGGCGTACTTTCACTCAAGACCAGACCTCGCGGATATCTGGACACAGAGGCCACACGCCGTCGAGACTCGAGAGATTCAGGAACAGAAACCGCCGAGAGAGTTCGTAGCAGTCAACGCGCGAGGCAGGGCCGAGAAGAAACCGCCGGCGACGCACGCGCGATGGACGCTCGGCGGAGGCGGTTGTCCCCGGCGGTGGCCGTGGCGGCGGCTCTTCTTTTCTTCCCCATGTTCTTCGGGAGCCATACGCCGGCGGCGGCGGCGGCGTACGGAGAGGCTTCAGGCGACGCCGGCGTGACGGCGCTGCAGAAGCACGCGGCGTTCTTCGACAAGGACGGCGACGGCATCGTCTCCCTCTCCGAGACATACGACGGGTTACGAGCACTCGGACTCGGGTCTGGCCTCTCCAGCTTGAGCGCCGCCTTCATCAATGGCGTCCTTTCCCCAAAGACCAGACCTGACAATGGAACAGCACCACGCTTATCTATCTACATAGA-GAACATCTACAAGGGGATTCATGGAAGCGATTCAAGCGCCTATGATTCTGAAGGAAGGTTCGTTGCTGAAAAGTTTGAGGAGATATTCGCCAAGCACGCCAAGACCGTGCCTGATGCTCTGACATCGGACGAGATAGACGAGCTGCTTCAAGCGAACCGCAAGCCCGGTGACTACACTGGATGGGTCGCAGCATCGTCAGAGTGGAAGATTCTGTACAAGATCGGCAAGGACAAGGACGGCCTTCTTCGCAAGGAGGCCGTGCGAGAAGTCTACGATGGAAGCCTGTTTACCAAGCTGGCGGCGGCAAGGATAAACGACGAAAACCAAGCATGATTGGTGACAGCTGA-TGGGATCATCT-CCATTGATTCTCCTGATTAAGCATCTCAAATCATGTGCCACTGTGATATGAGAACGATTGAGATGATGTCTGAACACAAAAAGATAGTCATGCAAGATAGAAGTATGAACAAGTGTGGACAGAATCTGCAGATGGGGATGGATCGTTTAGTTCTGTCCTTTTTTGTTGGTTTCTTGGGGATATTGAATGTTTATATTATTATACCTGCAAATGGTTGGCAGTGCAAGGCTGCAAGCAATGGCACACTATTTATACAAAAAAAAAA]

[+] EMBL AK070347             [CCAAAAGACTCGGGAGAAGAGATCTAACAGTCAACTCGTAAAATACTCCCTACGTTTCATATTTTAAATTATTTGACTTTTTTTAGTTAAACTTGTTAAAGCCTATGTTTATAAAAAATATATTAGTATTTTAACATAAAATAAACATATTATAAAAATATGTTTGAGAGTAGAAACAGCCGGCGAAGCGTGACGATGGACGCTCGACGGCGGCGGCTGTCCCCGGTGGTGGTCGTAGCGGCTTTTCTTTTCTTCCCCCTGTTCTTCGGGAGCCAGCCGGCGGCGGCGTACGGCGAGGCTTCAGGCGCCGGCGGCATGACGGCACTGCAGAAGCACGCGGCGTTCTTCGACAAGGACAATGACGGCTTCGTCTCCCCGACCGAGACATACGACGGGTTACGCGCCCTCGGACTTGGAGCTGGCTTCTCCATCTTAAGCGCTGCGTTGATCAATGGCGTACTTTCACTCAAGACCAGACCTCGCGGATATCTGGACACAGAGGCCACACGCCGTCGAGACTCGAGAGATTCAGGAACAGAAACCGCCGAGAGAGTTCGTAGCAGTCAACGCGCGAGGCAGAGCCGAGAAGAAACCGCCGGCGACGCACGCGCGATGGACGCTCGGCGGAGGCGGTTGTCCCCGGCGGTGGCCGTGGCGGCGGCTCTTCTTTTCTTCCCCATGTTCTTCGGGAGCCATACGCCGGCGGCGGCGGCGGCGTACGGAGAGGCTTCAGGCGACGCCGGCGTGACGGCGCTGCAGAAGCACGCGGCGTTCTTCGACAAGGACGGCGACGGCATCGTCTCCCTCTCCGAGACATACGACGGGTTACGAGCACTCGGACTCGGGTCTGGCCTCTCCAGCTTGAGCGCCGCCTTCATCAATGGCGTCCTTTCCCCAAAGACCAGACCTGACAATGGAACAGCACCACGCTTATCTATCTACATAGA GAACATCTACAAGGGGATTCATGGAAGCGATTCAAGCGCCTATGATTCTGAAGGAAGGTTCGTTGCTGAAAAGTTTGAGGAGATATTCGCCAAGCACGCCAAGACCGTGCCTGATGCTCTGACATCGGACGAGATAGACGAGCTGCTTCAAGCGAACCGCAAGCCCGGTGACTACACTGGATGGGTCGCAGCATCGTCAGAGTGGAAGATTCTGTACAAGATCGGCAAGGACAAGGACGGCCTTCTTCGCAAGGAGGCCGTGCGAGAAGTCTACGATGGAAGCCTGTTTACCAAGCTGGCGGCGGCAAGGATAAACGACGAAAACCAAGCATGATTGGTGACAGCTGA TGGGATCATCT CCATTGATTCTCCTGATTAAGCATCTCAAATCATGTGCCACTGTGATATGAGAACGATTGAGATGATGTCTGAACACAAAAAGATAGTCATGCAAGATAGAAGTATGAACAAGTGTGGACAGAATCTGCAGATGGGGATGGATCGTTTAGTTCTGTCCTTTTTTGTTGGTTTCTTGGGGATATTGAATGTTTATATTATTATACCTGCAAATGGTTGGCAGTGCAAGGCTGCAAGCAATGGCA                      ]
[+] EMBL AK104748             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCGAGACTCGAGAGATTCAGGAACAGAAACCGCCGAGAGAGTTCGTAGCAGTCAACGCGCGAGGCAGGGCCGAGAAGAAACCGCCGGCGACGCACGCGCGATGGACGCTCGGCGGAGGCGGTTGTCCCCGGCGGTGGCCGTGGCGGCGGCTCTTCTTTTCTTCCCCATGTTCTTCGGGAGCCATACGCCGGCGGCGGCGGCGGCGTACGGAGAGGCTTCAGGCGACGCCGGCGTGACGGCGCTGCAGAAGCACGCGGCGTTCTTCGACAAGGACGGCGACGGCATCGTCTCCCTCTCCGAGACATACGACGGGTTACGAGCACTCGGACTCGGGTCTGGCCTCTCCAGCTTGAGCGCCGCCTTCATCAATGGCGTCCTTTCCCCAAAGACCAGACCTGACAATGGAACAGCACCACGCTTATCTATCTACATAGA GAACATCTACAAGGGGATTCATGGAAGCGATTCAAGCGCCTATGATTCTGAAGGAAGGTTCGTTGCTGAAAAGTTTGAGGAGATATTCGCCAAGCACGCCAAGACCGTGCCTGATGCTCTGACATCGGACGAGATAGACGAGCTGCTTCAAGCGAACCGCAAGCCCGGTGACTACACTGGATGGGTCGCAGCATCGTCAGAGTGGAAGATTCTGTACAAGATCGGCAAGGACAAGGACGGCCTTCTTCGCAAGGAGGCCGTGCGAGAAGTCTACGATGGAAGCCTGTTTACCAAGCTGGCGGCGGCAAGGATAAACGACGAAAACCAAGCATGATTGGTGACAGCTGA TGGGATCATCT CCATTGATTCTCCTGATTAAGCATCTCAAATCATGTGCCACTGTGATATGAGAACGATTGAGATGATGTCTGAACACAAAAAGATAGTCATGCAAGATAGAAGTATGAACAAGTGTGGACAGAATCTGCAGATGGGGATGGATCGTTTAGTTCTGTCCTTTTTTGTTGGTTTCTTGGGGATATTGAATGTTTATATTATTATACCTGCAAATGGTTGGCAGTGCAAGGCTGCAAGCAATGGCACA                    ]
[+] EMBL OSS11405A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAGAGAGTTCGTAGCAGTCAACGCGCGAGGCAGGGCCGAGAAGAAACCGCCGGCGACGCACGCGCGATGGACGCTCGGCGGAGGCGGTTGTCCCCGGCGGTGGCCGTGGCGGCGGCTCTTCTTTTCTTCCCCATGTTCTTCGGGAGCCATACGCCGGCGG GGCGGCGGCGTACGGAGAGGCTTCAGGCGACGNCGGCGTGACGGCGCTGCAGAAGCACGCGGCGTTCTTCGACAAGGACGGCGACGGCATCGTCTCCCTCTCCGAGACATACGACGGGTTACGAGCACTCGGACTCGGGTCTGGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU088653             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        tTTCATCAATGGCGTCCTTTCCCCAAAGACCAGACCTGACAATGGAACAGCACCACGCTTATCTATCTACATAGAGGAACATCTACAAGGGGATTCATGGAAGCGATTCAAGCGCCTATGATTCTGAAGGAAGGTTCGTTGCTGAAAAGTTTGAGGAGATATTCGCCAAGCACGCCAAGACCGTGCCTGATGCTCTGACATCGGACGAGATAGACGAGCTGCTTCAAGCGAACCGCAAGCCCGGTGACTACACTGGATGGGTCGCAGCATCGTCAGAGTGGAAGATTCTGTACAAGATCGGCAAGGACAAGGACGGCCTTCTTCGCAAGGAGGCCGTGCGAGAAGTCTACGATGGAAGCCTGTTTACCAAGCTGGCGGCGGCAAGGATAAACGACGAAANCCAAGCATGATTGGTGACAGCTGA TGGGATCATCT CCATTGATTCTCCTGATTAAGCATCTCAAATCATGTGCCACTGTGATATGAGAACGATTGAGATGATGTCTGAACACAAAAAGATAGTCATGCAAGATAGAAGTATGAACAAGTGTGGACAGAATCTGCAGATGGGGATGGATCGTTTAGTTCTGTCCTTTTTTGTTGGTTTCTTGGGGATATTGAATGTTTATATTATTATACCTGCAAATGGTTGGCAGTGCAAGGCTGCAAGCAATGGCACACTATTTATACAAAAAAAAAA]
[+] EMBL C72370               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTCAAGCGCCTATGATTCTGAAGGAAGGTTCGTTGCTGAAAAGTTTGAGGAGATATTCGCCAAGCACGCCAAGACCGTGCCTGATGCTCTGACATCGGACGAGATAGACGAGCTGCTTCAAGCGAACCGCAAGCCCGGTGACTACACTGGATGGGTCGCAGCATCGTCAGAGTGGAAGATTCTGTACAAGATCGGCAAGGACAAGGACGGCCTTCTTCGCAAGGAGGCCGTGCGAGAAGTCTACGATGGAAGCCTGTTTACCAAGCTGGCGGCGGCAAGGATAAACGACGAAAACCAAGCATGATTGGTGACAGCTGATTGGGATCATCTCCCATTGATTCTCCTGATTAAGCATCTCAAATCATGGNGCACTGTGNTATG                                                                                                                                                                                                                       ]


>consensus_8571#0 CCAAAAGACTCGGGAGAAGAGATCTAACAGTCAACTCGTAAAATACTCCCTACGTTTCAT ATTTTAAATTATTTGACTTTTTTTAGTTAAACTTGTTAAAGCCTATGTTTATAAAAAATA TATTAGTATTTTAACATAAAATAAACATATTATAAAAATATGTTTGAGAGTAGAAACAGC CGGCGAAGCGTGACGATGGACGCTCGACGGCGGCGGCTGTCCCCGGTGGTGGTCGTAGCG GCTTTTCTTTTCTTCCCCCTGTTCTTCGGGAGCCAGCCGGCGGCGGCGTACGGCGAGGCT TCAGGCGCCGGCGGCATGACGGCACTGCAGAAGCACGCGGCGTTCTTCGACAAGGACAAT GACGGCTTCGTCTCCCCGACCGAGACATACGACGGGTTACGCGCCCTCGGACTTGGAGCT GGCTTCTCCATCTTAAGCGCTGCGTTGATCAATGGCGTACTTTCACTCAAGACCAGACCT CGCGGATATCTGGACACAGAGGCCACACGCCGTCGAGACTCGAGAGATTCAGGAACAGAA ACCGCCGAGAGAGTTCGTAGCAGTCAACGCGCGAGGCAGGGCCGAGAAGAAACCGCCGGC GACGCACGCGCGATGGACGCTCGGCGGAGGCGGTTGTCCCCGGCGGTGGCCGTGGCGGCG GCTCTTCTTTTCTTCCCCATGTTCTTCGGGAGCCATACGCCGGCGGCGGCGGCGGCGTAC GGAGAGGCTTCAGGCGACGCCGGCGTGACGGCGCTGCAGAAGCACGCGGCGTTCTTCGAC AAGGACGGCGACGGCATCGTCTCCCTCTCCGAGACATACGACGGGTTACGAGCACTCGGA CTCGGGTCTGGCCTCTCCAGCTTGAGCGCCGCCTTCATCAATGGCGTCCTTTCCCCAAAG ACCAGACCTGACAATGGAACAGCACCACGCTTATCTATCTACATAGAGAACATCTACAAG GGGATTCATGGAAGCGATTCAAGCGCCTATGATTCTGAAGGAAGGTTCGTTGCTGAAAAG TTTGAGGAGATATTCGCCAAGCACGCCAAGACCGTGCCTGATGCTCTGACATCGGACGAG ATAGACGAGCTGCTTCAAGCGAACCGCAAGCCCGGTGACTACACTGGATGGGTCGCAGCA TCGTCAGAGTGGAAGATTCTGTACAAGATCGGCAAGGACAAGGACGGCCTTCTTCGCAAG GAGGCCGTGCGAGAAGTCTACGATGGAAGCCTGTTTACCAAGCTGGCGGCGGCAAGGATA AACGACGAAAACCAAGCATGATTGGTGACAGCTGATGGGATCATCTCCATTGATTCTCCT GATTAAGCATCTCAAATCATGTGCCACTGTGATATGAGAACGATTGAGATGATGTCTGAA CACAAAAAGATAGTCATGCAAGATAGAAGTATGAACAAGTGTGGACAGAATCTGCAGATG GGGATGGATCGTTTAGTTCTGTCCTTTTTTGTTGGTTTCTTGGGGATATTGAATGTTTAT ATTATTATACCTGCAAATGGTTGGCAGTGCAAGGCTGCAAGCAATGGCACACTATTTATA CAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)