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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8579 cluster # 8579       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8579#0 length = 673 sequences # 5  

consensusID : consensus_8579#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 673
fasta sequence
                              [CAGCAAGGAGGCAGTTTATGAAATAATGAAGAAGCAAGTGATTGACATGGCTCGGCAGTCATTCCGGCCAGAGTTTTTGAATAGGATAGATGAGTACATTGTATTCCAGCCGCTGGACACCACAGAGATAAATCGCATCGTGGAGATCCAGCTGAACCGAGTCAAGAACCGGCTGAGGCAACAGAAGATTCATCTGCAGTACACACCAGAAGCTGTGGAGCATCTTGGCTCTCTCGGCTTTGACCCTAACTAC-GGTGCTAGGCCTGTGAAGAGGGTGATCCAGCAGATGGTAGAGAACGAGATCGCCCTCAGTGTCCTGAAGGGCGACTTCAAAGAAGACGACACCGTCCTCGTCGACGTGAGCTCCGTGGCGATCGCGAAAGGCCTTGCTCCACAGAAGAAGCTTGTCCTCCAGAGGTTAGAGAATGCAAACTTAGAGTTAGTCGCCAATGACTAGTTAGTTACACGATGGCATCGCCAAATCCTGTACCAGGTTTGAGGTTCCCCCTCGTAGTAGATGTTTTCAGCAGCTGCAGGAGCTGCTAGTTCGGCATGTTCCCACTTCTGAGCTTTCATATGGCTTTCTATAGAAAGTCTGTCCAGTTGAAAAGAATGTAACTTGCAAAGGATGTTAGTTAAACTGTTCTGTAAATATTAGTTTCTCTTGGCATCC]

[+] EMBL C28997               [CAGCAAGGAGGCAGTTTATGAAATAATGAAGAAGCAAGTGATTGACATGGCTCGGCAGTCATTCCGGCCAGAGTTTTTGAATAGGATAGATGAGTACATTGTATTCCAGCCGCTGGACACCACAGAGATAAATCGCATCGTGGAGATCCAGCTGAACCGAGTCAAGAACCGGCTGAGGCAACAGAAGATTCATCTGCAGTACACACCAGAAGCTGTGGAGCATCTTGGCTCTCTCGGCTTTGACCCTAACTAC GGTGCTAGGCCTGTGAAGAGGGTGATCCAGCAGATGGTAGAGAACGAGATCGNCCTCAGTGTCCTGAAGGGCGACTTCAAAGAAGACGACACCGTCCTC                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA764709             [                                    AGTGATTGACATGGCTCGGCAGTCATTCCGGCCAGAGTTTTTGAATAGGATAGATGAGTACATTGTATTCCAGCCGCTGGACACCACAGAGATAAATCGCATCGTGGAGATCCAGCTGAACCGAGTCAAGAACCGGCTGAGGCAACAGAAGATTCATCTGCAGTACACACCAGAAGCTGTGGAGCATCTTGGCTCTCTCGGCTTTGACCCTAACTAC GGTGCTAGGCCTGTGAAGAGGGTGATCCAGCAGATGGTAGAGAACGAGATCGCCCTCAGTGTCCTGAAGGGCGACTTCAAAGAAGACGACACCGTCCTCGTCGACGTGAGCTCCGTGGCGATCGCGAAAGGCCTTGCTCCACAGAAGAAGCTTGTCCTCCAGAGGTTAGAGAATGCAAACTTAGAGTTAGTCGCCAATGACTAGTTAGTTACACGATGGCATCGCCAAATCCTGTACCAGGTTTGAGGTTCCCCCTCGTAGTAGATGTTTTCAGCAGCTGCAGGAGCTGCTAGTTCGGCATGTTCCCACTTCTGAGCTTTCATATGGCTTTCTATAGAAAGTCTGTCCAGTTGAAAAGAATGTAACTTGCAAAGGATGTTAGTTAAACTGTTCTGTAAATATTAGTTTCTCTT       ]
[+] EMBL OSAA31821            [                                                                                       AGATGAGTACATTGTATTCCAGCCGCTGGACACCACAGAGATAAATCGCATCGTGGAGATCCAGCTGAACCGAGTCAAGAACCGGCTGAGGCAACAGAAGATTCATCTGCAGTACACACCAGAAGCTGTGGAGCATCTTGGCTCTCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU172375             [                                                                                                                                                                                                                                 TGGCTCTCTCGGCTTTGACCCTANCTACGGGTGCTAGGCCTGTAAAGAGGGTGATCCAGCAGATGGTAGAGAACGAGATCGCCCTCAGTGTCCTGAAGGGCGNCTTCAAAGAAGACGACACCGTCCTCGTCGACGTNAGCTCCGTGGCGATCGCGAAAGGCCTTGCTCCACAGAAGAAGCTTGTCCTCCAGAGGTTAGAGAATGCAAACTTAGAGTTAGTCGCCAATGACTAGTTAGTTACACGATGGCATCGCCAAATCCTGTACCAGGTTTGAGGTTCCCCCTCGTAGTAGATGTTTTCAGCAGCTGCAGGAGCTGCTAGTTCGGCATGTTCCCACTTCTGAGCTTTCATATGGCTTTCTATAGAAAGTCTGTCCAGTTGAAAAGAATGTAACTTGCAAAGGATGTTAGTTAAAaaaa                             ]
[-] EMBL OSAA31654            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTCGTAGTAGATGTTTTCAGCAGCTGCAGGAGCTGCTAGTTCGGCATGTTCCCACTTCTGAGCTTTCATATGGCTTTCTATAGAAAGTCTGTCCAGTTGAAAAGAATGTAACTTGCAAAGGATGTTAGTTAAACTGTTCTGTAAATATTAGTTTCTCTTGGCATCC]


>consensus_8579#0 CAGCAAGGAGGCAGTTTATGAAATAATGAAGAAGCAAGTGATTGACATGGCTCGGCAGTC ATTCCGGCCAGAGTTTTTGAATAGGATAGATGAGTACATTGTATTCCAGCCGCTGGACAC CACAGAGATAAATCGCATCGTGGAGATCCAGCTGAACCGAGTCAAGAACCGGCTGAGGCA ACAGAAGATTCATCTGCAGTACACACCAGAAGCTGTGGAGCATCTTGGCTCTCTCGGCTT TGACCCTAACTACGGTGCTAGGCCTGTGAAGAGGGTGATCCAGCAGATGGTAGAGAACGA GATCGCCCTCAGTGTCCTGAAGGGCGACTTCAAAGAAGACGACACCGTCCTCGTCGACGT GAGCTCCGTGGCGATCGCGAAAGGCCTTGCTCCACAGAAGAAGCTTGTCCTCCAGAGGTT AGAGAATGCAAACTTAGAGTTAGTCGCCAATGACTAGTTAGTTACACGATGGCATCGCCA AATCCTGTACCAGGTTTGAGGTTCCCCCTCGTAGTAGATGTTTTCAGCAGCTGCAGGAGC TGCTAGTTCGGCATGTTCCCACTTCTGAGCTTTCATATGGCTTTCTATAGAAAGTCTGTC CAGTTGAAAAGAATGTAACTTGCAAAGGATGTTAGTTAAACTGTTCTGTAAATATTAGTT TCTCTTGGCATCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)