|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8592#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2599 fasta sequence
[GAGAAGGAGAAATGTTGATTTCTTGAGAGTTGAGACGAGGAAGAAGAGCAAGCGGATAAACCACCTGTGCTAAAACCCTCATCGCCGCGCCGCCGCCTCCGCCTCTGCTCCGCCGCTCCCAACCCTGCGCGGCGGGCGGCGGTGAGCCGGTCTGCTCTTCCCTCTACCGGCCGCCCACGCTGCTCCTCACGGCGCTCTCGATTCCTGGTTCCTCTCCCCGTGGGCCTCCATGTCTTTGACCACCGTTTCTTTCTCATACCCCGCCAAGCCGCTTCCCAAATGGCCGTGCACGCTGCCTAAGCCGCCGCCGAGGGCTCGCTGCCGTTTTGTGGTGCGGGCGGACGTCAAGGTGATCTCTTCCGGTGAGGCCTGCCGCCGTGGGCTCGCCGCCGGCATCGACAAGCTCGCCGACGCCGTCGCGGTCACTCTAGGCCCCAAAGGCAGGAATGTTGTTATTGACCAAGACGATGTTCCTAAAGTAATCAATGATGGTATCACAATTGCCAAGGCTATAGAGCTCCCAAATGCTGTTGAGCACGCAGGTGCCATGTTACTTCAAGAGATAGCATCCAAGACGAATAGTTCTGTTGGCGATGGAACAACAACTGCTATTATTTTGGCAAGAGAAATTATCAATCTTGGGTTGTTGGCAGTAGCCACTGGTGCTAACCCAGTTGCCCTGAGAAAGGGTATTGACAAAGCTGTTCATGAACTTATTGGGATCTTGAAGACTAAATGTATCCCTGTAAGTACAAAGGAGGACATAAAAGGTAATTTTGTCACCTGGGAAGCATACATCACGAGCACAGAAATACGGAATAATAAACCATACCCACTAGACTAGTAACCTTTCCTTTTTATTTTAGAAAGCATATAGTCGATATAGCATGAAGCATATCATGATTTGTCTGTGAATGCACCGAAATTATTCTGTGGTCAGATTATAAAATGTTGTAAATCTCTAAATTTCATTTTCAGCTGTTGCTTCAATATCAGCTGGCAATGATGAATATGTTGGCGATCTCATTGCTGATGCATTGGAGAAGATAGGTCCTGATGGAATAATTAAAATTGAGTCCTCATCTTCAATATATACTTCAGTTGAGGTGCAAGAAGGAATGAAGATAGACAAAGGTTATATCTCTCCACATTTCATCACAAATCAAGACAAAGCAATTGTTGAATTTGAAAATGCTAGGGTACTTTTAACTGATCAGCGGGTGGATGATGTCCAAGAGATACTTCCTTTGCTAGAGAAGACCACACAGTTGAGTGTCCCTTTGTTGATTATTGCGGAGGATGTTTCACATACGGTGTATTCAACTCTTGTTCTTAACAAACTGAATGGACTGCTAAATGTTGCTGTTGTTAAATGTCCTGGTTTGGGAGATGAAAAGAAGGCTATTCTCCAAGATATTGCTATTATGACAGGTGCAGATTTCTTTGCTAGTGACCTTGGCTGGTGTCTTCAAGGTGCTACTTCTGATCAGCTAGGTATGGCTCAGAAGATCACTATAACAAGTGATACTACTACTATCATTGCACATCCTTCGATGAGACCAGAAATTGAGGCCAGAATTCAGCAACTTAAGAAAGATCTAGAGGAGACAACAAGTGCCTATCTAAAAGAAAGGTTTTCATCTCGTATCGCTAAACTCTCAAGAGGTATTGCAGTTATCAAGGTTGGTGCAGCTACTGAAGCTGAACTCGAGGATAGGAAACTGAGAGCGGAGGATGCAAAAAATGCAACCTTTGCAGCCATTAGCGAAGGCATAACTCCTGGAGGTGGTGTGACGTATGTTCAATTATCAAAGTATATTCCCAGTATCATGGATCTTGTAGATGACTCTGAAGAGAAGATTGGTGTAAATATAGTTGGGAAGGCACTTCTCGTCCCTGCTATGACGATAGCTCGCAATGCTGGGGCAGATGGTCCAGCTGTTGTAGAGAAGCTTCTTGCGAGTGAATGGCGAGTTGGATACAATGCAATGACTGACAAATTTGAAGACCTTGTTGATGCTGGTGTGGTAGACCCATGCAGGGTTGCAAGATGTGTGCTTCAAAACTCTGCCTCTATTGCAGGACTTATTTTAATGACGCAAGCTATGATGTTCGACAAAATAAAGAAGAAAAAGTCCACCATTCCTCAAATTCCTGGCATCCCACCATTGCAGATAAATCAAAATGCTTAGATTTGAACTAGTAACTTACTGTCATTGAAGAAAGGTCCATGATGCAAGGCCTTTGTTTGATCGGTTAGATGAGTTGAACCAAGAATTGGAAGTGGAGCCTCTGAGCAGATCATCAGCTGGAGCCACTGGGTACGATAACGGAGGAAAAGATCTACTTCTATGGTTCAGATATCAGTAACTTAAAACTAACTGTATACTAGTCAGCAAAATGTCTCCATATCCCTCTTCTCTCTTTTCCCTTGGAGGTGCAAGGAGCATTTTTTTTCCTTCACAATTTTGTAACGTAGAAGATAGGATTACTAATCCATTGCAGATCCCAAAATGTTGAACGTGCTAGTTTTATTGTACTTTTATATCTTCATGAATGTGCATGATGATTTGCTTGATACTACTTTAAAAAAAAAAGA]
[+] EMBL AK068277 [GAGAAGGAGAAATGTTGATTTCTTGAGAGTTGAGACGAGGAAGAAGAGCAAGCGGATAAACCACCTGTGCTAAAACCCTCATCGCCGCGCCGCCGCCTCCGCCTCTGCTCCGCCGCTCCCAACCCTGCGCGGCGGGCGGCGGTGAGCCGGTCTGCTCTTCCCTCTACCGGCCGCCCACGCTGCTCCTCACGGCGCTCTCGATTCCTGGTTCCTCTCCCCGTGGGCCTCCATGTCTTTGACCACCGTTTCTTTCTCATACCCCGCCAAGCCGCTTCCCAAATGGCCGTGCACGCTGCCTAAGCCGCCGCCGAGGGCTCGCTGCCGTTTTGTGGTGCGGGCGGACGTCAAGGTGATCTCTTCCGGTGAGGCCTGCCGCCGTGGGCTCGCCGCCGGCATCGACAAGCTCGCCGACGCCGTCGCGGTCACTCTAGGCCCCAAAGGCAGGAATGTTGTTATTGACCAAGACGATGTTCCTAAAGTAATCAATGATGGTATCACAATTGCCAAGGCTATAGAGCTCCCAAATGCTGTTGAGCACGCAGGTGCCATGTTACTTCAAGAGATAGCATCCAAGACGAATAGTTCTGTTGGCGATGGAACAACAACTGCTATTATTTTGGCAAGAGAAATTATCAATCTTGGGTTGTTGGCAGTAGCCACTGGTGCTAACCCAGTTGCCCTGAGAAAGGGTATTGACAAAGCTGTTCATGAACTTATTGGGATCTTGAAGACTAAATGTATCCCTGTAAGTACAAAGGAGGACATAAAAGGTAATTTTGTCACCTGGGAAGCATACATCACGAGCACAGAAATACGGAATAATAAACCATACCCACTAGACTAGTAACCTTTCCTTTTTATTTTAGAAAGCATATAGTCGATATAGCATGAAGCATATCATGATTTGTCTGTGAATGCACCGAAATTATTCTGTGGTCAGATTATAAAATGTTGTAAATCTCTAAATTTCATTTTCAGCTGTTGCTTCAATATCAGCTGGCAATGATGAATATGTTGGCGATCTCATTGCTGATGCATTGGAGAAGATAGGTCCTGATGGAATAATTAAAATTGAGTCCTCATCTTCAATATATACTTCAGTTGAGGTGCAAGAAGGAATGAAGATAGACAAAGGTTATATCTCTCCACATTTCATCACAAATCAAGACAAAGCAATTGTTGAATTTGAAAATGCTAGGGTACTTTTAACTGATCAGCGGGTGGATGATGTCCAAGAGATACTTCCTTTGCTAGAGAAGACCACACAGTTGAGTGTCCCTTTGTTGATTATTGCGGAGGATGTTTCACATACGGTGTATTCAACTCTTGTTCTTAACAAACTGAATGGACTGCTAAATGTTGCTGTTGTTAAATGTCCTGGTTTGGGAGATGAAAAGAAGGCTATTCTCCAAGATATTGCTATTATGACAGGTGCAGATTTCTTTGCTAGTGACCTTGGCTGGTGTCTTCAAGGTGCTACTTCTGATCAGCTAGGTATGGCTCAGAAGATCACTATAACAAGTGATACTACTACTATCATTGCACATCCTTCGATGAGACCAGAAATTGAGGCCAGAATTCAGCAACTTAAGAAAGATCTAGAGGAGACAACAAGTGCCTATCTAAAAGAAAGGTTTTCATCTCGTATCGCTAAACTCTCAAGAGGTATTGCAGTTATCAAGGTTGGTGCAGCTACTGAAGCTGAACTCGAGGATAGGAAACTGAGAGCGGAGGATGCAAAAAATGCAACCTTTGCAGCCATTAGCGAAGGCATAACTCCTGGAGGTGGTGTGACGTATGTTCAATTATCAAAGTATATTCCCAGTATCATGGATCTTGTAGATGACTCTGAAGAGAAGATTGGTGTAAATATAGTTGGGAAGGCACTTCTCGTCCCTGCTATGACGATAGCTCGCAATGCTGGGGCAGATGGTCCAGCTGTTGTAGAGAAGCTTCTTGCGAGTGAATGGCGAGTTGGATACAATGCAATGACTGACAAATTTGAAGACCTTGTTGATGCTGGTGTGGTAGACCCATGCAGGGTTGCAAGATGTGTGCTTCAAAACTCTGCCTCTATTGCAGGACTTATTTTAATGACGCAAGCTATGATGTTCGACAAAATAAAGAAGAAAAAGTCCACCATTCCTCAAATTCCTGGCATCCCACCATTGCAGATAAATCAAAATGCTTAGATTTGAACTAGTAACTTACTGTCATTGAAGAAAGGTCCATGATGCAAGGCCTTTGTTTGATCGGTTAGATGAGTTGAACCAAGAATTGGAAGTGGAGCCTCTGAGCAGATCATCAGCTGGAGCCACTGGGTACGATAACGGAGGAAAAGATCTACTTCTATGGTTCAGATATCAGTAACTTAAAACTAACTGTATACTAGTCAGCAAAATGTCTCCATATCCCTCTTCTCTCTTTTCCCTTGGAGGTGCAAGGAGCATTTTTTTTCCTTCACAATTTTGTAACGTAGAAGATAGGATTACTAGTCCATTGCAGATCCCAAAATGTTGAACGTGCTAGTTTTATTGTACTT ]
[+] EMBL AK060773 [ CTGAATGGACTGCTAAATGTTGCTGTTGTTAAATGTCCTGGTTTGGGAGATGAAAAGAAGGCTATTCTCCAAGATATTGCTATTATGACAGGTGCAGATTTCTTTGCTAGTGACCTTGGCTGGTGTCTTCAAGGTGCTACTTCTGATCAGCTAGGTATGGCTCAGAAGATCACTATAACAAGTGATACTACTACTATCATTGCACATCCTTCGATGAGACCAGAAATTGAGGCCAGAATTCAGCAACTTAAGAAAGATCTAGAGGAGACAACAAGTGCCTATCTAAAAGAAAGGTTTTCATCTCGTATCGCTAAACTCTCAAGAGGTATTGCAGTTATCAAGGTTGGTGCAGCTACTGAAGCTGAACTCGAGGATAGGAAACTGAGAGCGGAGGATGCAAAAAATGCAACCTTTGCAGCCATTAGCGAAGGCATAACTCCTGGAGGTGGTGTGACGTATGTTCAATTATCAAAGTATATTCCCAGTATCATGGATCTTGTAGATGACTCTGAAGAGAAGATTGGTGTAAATATAGTTGGGAAGGCACTTCTCGTCCCTGCTATGACGATAGCTCGCAATGCTGGGGCAGATGGTCCAGCTGTTGTAGAGAAGCTTCTTGCGAGTGAATGGCGAGTTGGATACAATGCAATGACTGACAAATTTGAAGACCTTGTTGATGCTGGTGTGGTAGACCCATGCAGGGTTGCAAGATGTGTGCTTCAAAACTCTGCCTCTATTGCAGGACTTATTTTAATGACGCAAGCTATGATGTTCGACAAAATAAAGAAGAAAAAGTCCACCATTCCTCAAATTCCTGGCATCCCACCATTGCAGATAAATCAAAATGCTTAGATTTGAACTAGTAACTTACTGTCATTGAAGAAAGGTCCATGATGCAAGGCCTTTGTTTGATCGGTTAGATGAGTTGAACCAAGAATTGGAAGTGGAGCCTCTGAGCAGATCATCAGCTGGAGCCACTGGGTACGATAACGGAGGAAAAGATCTACTTCTATGGTTCAGATATCAGTAACTTAAAACTAACTGTATACTAGTCAGCAAAATGTCTCCATATCCCTCTTCTCTCTTTTCCCTTGGAGGTGCAAGGAGCATTTTTTTTCCTTCACAATTTTGTAACGTAGAAGATAGGATTACTAATCCATTGCAGATCCCAAAATGTTGAACGTGCTAGTTTTATTGTACTTTTATATCTTCATGAATGTGCATGATGA ]
[-] EMBL CB669715 [ TGCAACCTTTGCAGCCATTAGCGAAGGCATAACTCCTGGAGGTGGTGTGACGTATGTTCAATTATCAAAGTATATTCCCAGTATCATGGATCTTGTAGATGACTCTGAAGAGAAGATTGGTGTAAATATAGTTGGGAAGGCACTTCTCGTCCCTGCTATGACGATAGCTCGCAATGCTGGGGCAGATGGTCCAGCTGTTGTAGAGAAGCTTCTTGCGAGTGAATGGCGAGTTGGATACAATGCAATGACTGACAAATTTGAAGACCTTGTTGATGCTGGTGTGGTAGACCCATGCAGGGTTGCAAGATGTGTGCTTCAAAACTCTGCCTCTATTGCAGGACTTATTTTAATGACGCAAGCTATGATGTTCGACAAAATAAAGAAGAAAAAGTCCACCATTCCTCAAATTCCTGGCATCCCACCATTGCAGATAAATCAAAATGCTTAGATTTGAACTAGTAACTTACTGTCATTGAAGAAAGGTCCATGATGCAAGGCCTTTGTTTGATCGGTTAGATGAGTTGAACCAAGAATTGGAAGTGGAGCCTCTGAGCAGATCATCAGCTGGAGCCACTGGGTACGATAACGGAGGAAAAGATCTACTTCTATGGTTCAGATATCAGTAACTTAAAACTAACTGTATACTAGTCAGCAAAATGTCTCCATATCCCTCTTCTCTCTTTTCCCTTGGAGGTGCAAGGAGCATTTTTTTTCCTTCACAATTTTGTAACGTAGAAGATAGGATTACTAATCCATTGCAGATCCCAAAATGTTGAACGTGCTAGTTTTATTGTACTTTTATATCTTCATGAATGTGCATGATGATTTGCTTGATACTACTTTAAAAAAAAAAGA]
consensusID : consensus_8592#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 757 fasta sequence
[AATTATCAAAGTATATTCCCAGTATCATGGATCTTGTAGATGACTCTGAAGAGAAGATTGGTGTAAATATAGTTGGGAAGGCACTTCTCGTCCCTGCTATGACGATAGCTCGCAATGCTGGGGCAGATGGTCCAGCTGTTGTAGAGAAGCTTCTTGCGAGTGAATGGCGAGTTGGATACAATGCAATGACTGACAAATTTGAAGACCTTGTTGATGCTGGTGTGGTAGACCCATGCAGGGTTGCAAGATGTGTGCTTCAAAACTCTGCCTCTATTGCAGGACTTATTTTAATGACGCAAGCTATGATGTTCGACAAAATAAAGAAGAAAAAGTCCCCCATTCCTCAAATTCCTGGCATCCCACCATTGCAGATAAATCAAAATGCTTAGATTTGAACTAGTAACTTACTGTCATTGAAGAAAGGTCCATGATGCAAGGCCTTTGTTTGATCGGTTAGATGAGTTGAACCAAGAATTGGAAGTGGAGCCTCTGAGCAGATCATCAGCTGGAGCCACTGGGTACGATAACGGAGGAAAAGATCTACTTCTATGGTTCAGATATCAGTAACTTAAAACTAACTGTATACTAGTCAGCAAAATGTCTCCATATCCCTCTTCTCTCTTTTCCCTTGGAGGTGCAAGGAGCATTTTTTTTCCTTCACAATTTTGTAACGTAGAAGATAGGATTACTAATCCATTGCAGATCCCAAAAAGTGGAACGTGCTAGTTTTATTGTAAAAAAAAAAAACAATAAAAGA]
[-] EMBL CB653365 [AATTATCAAAGTATATTCCCAGTATCATGGATCTTGTAGATGACTCTGAAGAGAAGATTGGTGTAAATATAGTTGGGAAGGCACTTCTCGTCCCTGCTATGACGATAGCTCGCAATGCTGGGGCAGATGGTCCAGCTGTTGTAGAGAAGCTTCTTGCGAGTGAATGGCGAGTTGGATACAATGCAATGACTGACAAATTTGAAGACCTTGTTGATGCTGGTGTGGTAGACCCATGCAGGGTTGCAAGATGTGTGCTTCAAAACTCTGCCTCTATTGCAGGACTTATTTTAATGACGCAAGCTATGATGTTCGACAAAATAAAGAAGAAAAAGTCCCCCATTCCTCAAATTCCTGGCATCCCACCATTGCAGATAAATCAAAATGCTTAGATTTGAACTAGTAACTTACTGTCATTGAAGAAAGGTCCATGATGCAAGGCCTTTGTTTGATCGGTTAGATGAGTTGAACCAAGAATTGGAAGTGGAGCCTCTGAGCAGATCATCAGCTGGAGCCACTGGGTACGATAACGGAGGAAAAGATCTACTTCTATGGTTCAGATATCAGTAACTTAAAACTAACTGTATACTAGTCAGCAAAATGTCTCCATATCCCTCTTCTCTCTTTTCCCTTGGAGGTGCAAGGAGCATTTTTTTTCCTTCACAATTTTGTAACGTAGAAGATAGGATTACTAATCCATTGCAGATCCCAAAAAGTGGAACGTGCTAGTTTTATTGTAAAAAAAAAAAACAATAAAAGA]
consensusID : consensus_8592#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 751 fasta sequence
[AAACCCTCATCTCCGCGCCGCCGCCTCCGCCTCTGCTCCGCCGCTCCCAACCCTGCGCGGCGGGCGGCGGTGAGCCGGTCTGCTCTTCCCTCTACCGGCCGCCCACGCTGCTCCTCACGGCGCTCTCGATTCCTGGTTCCTCTCCCCGTGGGCCTCCATGTCTTTGACCACCGTTTCTTTCTCATACCCCGCCAAGCCGCTTCCCAAATGGCCGTGCACGCTGCCTAAGCCGCCGCCGAGGGCTCGCTGCCGTTTTGTGGTGCGGGCGGACGTCAAGGTGATCTCTTCCGGTGAGGCCTGCCGCCGTGGGCTCGCCGCCGGCATCGACAAGCTCGCCGACGCCGTCGCGGTCACTCTAGGCCCCAAAGGCAGGAATGTTGTTATTGACCAAGACGATGTTCCTAAAGTAATCAATGATGGTATCACAATTGCCAAGGCTATAGAGCTCCCAAATGCTGTTGAGCACGCAGGTGCCATGTTACTTCAAGAGATAGCATCCAAGACGAATAGTTCTGTTGGCGATGGAACAACAACTGCTATTATTTTGGCAAGAGAAATTATCAATCTTGGGTTGTTGGCAGTAGCCACTGGTGCTAACCCAGTTGCCCTGAGAAAGGGTATTGACAAAGCTGTTCATGAACTTATTGGGATCTTGAAGACTAAATGTATCCCTGTAAGTACAAAGGAGGACATAAAAGCTGTTGCTTCAATATCAGCTGGCAATGATGAATATGTTGGCGATCTCATTGCT]
[+] EMBL CB669714 [AAACCCTCATCTCCGCGCCGCCGCCTCCGCCTCTGCTCCGCCGCTCCCAACCCTGCGCGGCGGGCGGCGGTGAGCCGGTCTGCTCTTCCCTCTACCGGCCGCCCACGCTGCTCCTCACGGCGCTCTCGATTCCTGGTTCCTCTCCCCGTGGGCCTCCATGTCTTTGACCACCGTTTCTTTCTCATACCCCGCCAAGCCGCTTCCCAAATGGCCGTGCACGCTGCCTAAGCCGCCGCCGAGGGCTCGCTGCCGTTTTGTGGTGCGGGCGGACGTCAAGGTGATCTCTTCCGGTGAGGCCTGCCGCCGTGGGCTCGCCGCCGGCATCGACAAGCTCGCCGACGCCGTCGCGGTCACTCTAGGCCCCAAAGGCAGGAATGTTGTTATTGACCAAGACGATGTTCCTAAAGTAATCAATGATGGTATCACAATTGCCAAGGCTATAGAGCTCCCAAATGCTGTTGAGCACGCAGGTGCCATGTTACTTCAAGAGATAGCATCCAAGACGAATAGTTCTGTTGGCGATGGAACAACAACTGCTATTATTTTGGCAAGAGAAATTATCAATCTTGGGTTGTTGGCAGTAGCCACTGGTGCTAACCCAGTTGCCCTGAGAAAGGGTATTGACAAAGCTGTTCATGAACTTATTGGGATCTTGAAGACTAAATGTATCCCTGTAAGTACAAAGGAGGACATAAAAGCTGTTGCTTCAATATCAGCTGGCAATGATGAATATGTTGGCGATCTCATTGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8592#0 GAGAAGGAGAAATGTTGATTTCTTGAGAGTTGAGACGAGGAAGAAGAGCAAGCGGATAAA 60
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 CCACCTGTGCTAAAACCCTCATCGCCGCGCCGCCGCCTCCGCCTCTGCTCCGCCGCTCCC 120
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 AACCCTGCGCGGCGGGCGGCGGTGAGCCGGTCTGCTCTTCCCTCTACCGGCCGCCCACGC 180
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 TGCTCCTCACGGCGCTCTCGATTCCTGGTTCCTCTCCCCGTGGGCCTCCATGTCTTTGAC 240
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 CACCGTTTCTTTCTCATACCCCGCCAAGCCGCTTCCCAAATGGCCGTGCACGCTGCCTAA 300
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 GCCGCCGCCGAGGGCTCGCTGCCGTTTTGTGGTGCGGGCGGACGTCAAGGTGATCTCTTC 360
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 CGGTGAGGCCTGCCGCCGTGGGCTCGCCGCCGGCATCGACAAGCTCGCCGACGCCGTCGC 420
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 GGTCACTCTAGGCCCCAAAGGCAGGAATGTTGTTATTGACCAAGACGATGTTCCTAAAGT 480
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 AATCAATGATGGTATCACAATTGCCAAGGCTATAGAGCTCCCAAATGCTGTTGAGCACGC 540
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 AGGTGCCATGTTACTTCAAGAGATAGCATCCAAGACGAATAGTTCTGTTGGCGATGGAAC 600
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 AACAACTGCTATTATTTTGGCAAGAGAAATTATCAATCTTGGGTTGTTGGCAGTAGCCAC 660
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 TGGTGCTAACCCAGTTGCCCTGAGAAAGGGTATTGACAAAGCTGTTCATGAACTTATTGG 720
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 GATCTTGAAGACTAAATGTATCCCTGTAAGTACAAAGGAGGACATAAAAGGTAATTTTGT 780
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 CACCTGGGAAGCATACATCACGAGCACAGAAATACGGAATAATAAACCATACCCACTAGA 840
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 CTAGTAACCTTTCCTTTTTATTTTAGAAAGCATATAGTCGATATAGCATGAAGCATATCA 900
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 TGATTTGTCTGTGAATGCACCGAAATTATTCTGTGGTCAGATTATAAAATGTTGTAAATC 960
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 TCTAAATTTCATTTTCAGCTGTTGCTTCAATATCAGCTGGCAATGATGAATATGTTGGCG 1020
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 ATCTCATTGCTGATGCATTGGAGAAGATAGGTCCTGATGGAATAATTAAAATTGAGTCCT 1080
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 CATCTTCAATATATACTTCAGTTGAGGTGCAAGAAGGAATGAAGATAGACAAAGGTTATA 1140
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 TCTCTCCACATTTCATCACAAATCAAGACAAAGCAATTGTTGAATTTGAAAATGCTAGGG 1200
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 TACTTTTAACTGATCAGCGGGTGGATGATGTCCAAGAGATACTTCCTTTGCTAGAGAAGA 1260
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 CCACACAGTTGAGTGTCCCTTTGTTGATTATTGCGGAGGATGTTTCACATACGGTGTATT 1320
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 CAACTCTTGTTCTTAACAAACTGAATGGACTGCTAAATGTTGCTGTTGTTAAATGTCCTG 1380
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 GTTTGGGAGATGAAAAGAAGGCTATTCTCCAAGATATTGCTATTATGACAGGTGCAGATT 1440
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 TCTTTGCTAGTGACCTTGGCTGGTGTCTTCAAGGTGCTACTTCTGATCAGCTAGGTATGG 1500
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 CTCAGAAGATCACTATAACAAGTGATACTACTACTATCATTGCACATCCTTCGATGAGAC 1560
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 CAGAAATTGAGGCCAGAATTCAGCAACTTAAGAAAGATCTAGAGGAGACAACAAGTGCCT 1620
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 ATCTAAAAGAAAGGTTTTCATCTCGTATCGCTAAACTCTCAAGAGGTATTGCAGTTATCA 1680
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 AGGTTGGTGCAGCTACTGAAGCTGAACTCGAGGATAGGAAACTGAGAGCGGAGGATGCAA 1740
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 ------------------------------------------------------------
consensus_8592#0 AAAATGCAACCTTTGCAGCCATTAGCGAAGGCATAACTCCTGGAGGTGGTGTGACGTATG 1800
consensus_8592#1 ------------------------------------------------------------
consensus_8592#2 --------------------------------------------------------AAAC 4
consensus_8592#0 TTCAATTATCAAAGTATATTCCCAGTATCATGGATCTTGTAGATGACTCTGAAGAGAAGA 1860
consensus_8592#1 ---AATTATCAAAGTATATTCCCAGTATCATGGATCTTGTAGATGACTCTGAAGAGAAGA 57
consensus_8592#2 CCTCATCTCCGCGCCGCCGCCTCCGCCTCTGCTCCGCCGCTCCCAACCCTGCGCGGCGGG 64
** * * * * ** * ** *** * *
consensus_8592#0 TTGGTGTAAATATAGTTGGGAAGGCACTTCTCGTCCCTGCTATGACGATAGCTCGCAATG 1920
consensus_8592#1 TTGGTGTAAATATAGTTGGGAAGGCACTTCTCGTCCCTGCTATGACGATAGCTCGCAATG 117
consensus_8592#2 CGGCGGTGAGC-CGGTCTGCTCTTCCCTCTACCGGCCGCCCACGCTGCTC-CTCACGGCG 122
* ** * ** * * ** * ** * * * * * *** * *
consensus_8592#0 CTGG-GGCAGATGGTCCAGCTGTTGTAGAGAAGCTTCTTGCGAGTGAATGGCGAGTTGG- 1978
consensus_8592#1 CTGG-GGCAGATGGTCCAGCTGTTGTAGAGAAGCTTCTTGCGAGTGAATGGCGAGTTGG- 175
consensus_8592#2 CTCTCGATTCCTGGTTC--CTCTCCCCGTGGGCCTCCATGTCTTTGACCACCGTTTCTTT 180
** * **** * ** * * * ** * ** *** ** *
consensus_8592#0 ---ATACAATGCAATGAC---TGACAAAT--TTGAAGACCTTGTTGATGCTGGTGTGGTA 2030
consensus_8592#1 ---ATACAATGCAATGAC---TGACAAAT--TTGAAGACCTTGTTGATGCTGGTGTGGTA 227
consensus_8592#2 CTCATACCCCGCCAAGCCGCTTCCCAAATGGCCGTGCACGCTGCCTAAGCCGCCGCCGAG 240
**** ** * * * * ***** * ** ** * ** * * *
consensus_8592#0 GACCCA-TGCAGGGTTGCAAGATGTGTG--CTTCAAAACTCTGCCTCTATTGCAGGACTT 2087
consensus_8592#1 GACCCA-TGCAGGGTTGCAAGATGTGTG--CTTCAAAACTCTGCCTCTATTGCAGGACTT 284
consensus_8592#2 GGCTCGCTGCCGTTTTGTGGTGCGGGCGGACGTCAAGGTGAT-CTCTTCCGGTGAGGCCT 299
* * * *** * *** * * * * **** * * * * * * *
consensus_8592#0 ATTTTAATGACGCAAGCTATGATGTTCGACAAAAT----AAAGAAGAAAAAGTCCACCAT 2143
consensus_8592#1 ATTTTAATGACGCAAGCTATGATGTTCGACAAAAT----AAAGAAGAAAAAGTCCCCCAT 340
consensus_8592#2 GCCGCCGTGG-GCTCGCCGCCGGCATCGACAAGCTCGCCGACGCCGTCGCGGTCACTCTA 358
** ** ** ******* * * * * *** *
consensus_8592#0 TCCTCAAATTCCTGGCATCCCACCATTGCAGATAAATCAAAATGCTTAGATTTGAACTAG 2203
consensus_8592#1 TCCTCAAATTCCTGGCATCCCACCATTGCAGATAAATCAAAATGCTTAGATTTGAACTAG 400
consensus_8592#2 GGCCCCAAAGGCAGGAATGTTGTTATTG--ACCAAGACGATGTTCCTAAAGT--AATCAA 414
* * ** * ** ** **** ** * * * * ** * * ** *
consensus_8592#0 TAACTTACTGTCATTGAAGAAAGGTCCATGATGC-----AAGGCCTTTGTTTGATCGGTT 2258
consensus_8592#1 TAACTTACTGTCATTGAAGAAAGGTCCATGATGC-----AAGGCCTTTGTTTGATCGGTT 455
consensus_8592#2 TGA--TGGTATCACAATTGCCAAGGCTATAGAGCTCCCAAATGCTGTTGAGCACGCAGGT 472
* * * * *** * * * * ** ** ** ** *** * * *
consensus_8592#0 AGATGAGTTGAACCAAGAATTGGAAGTGGAGCCTCTGAGCAGATC-ATCAGC--TGGAGC 2315
consensus_8592#1 AGATGAGTTGAACCAAGAATTGGAAGTGGAGCCTCTGAGCAGATC-ATCAGC--TGGAGC 512
consensus_8592#2 -GCCATGTTACTTCAAGAGATAGCATCCAAGAC---GAATAGTTCTGTTGGCGATGGAAC 528
* *** ***** * * * ** * ** ** ** * ** **** *
consensus_8592#0 CACTG--GGTACGATAACGGAGGAAAAGATCTACTTCTATGGTTCAGATATCAGTAACT- 2372
consensus_8592#1 CACTG--GGTACGATAACGGAGGAAAAGATCTACTTCTATGGTTCAGATATCAGTAACT- 569
consensus_8592#2 AACAACTGCTATTATTTTGGCAAGAGAAATTATCAATCTTGGGTT-GTTGGCAGTAGCCA 587
** * ** ** ** * * ** * *** * * * ***** *
consensus_8592#0 -TAAAACTAACTGTATACTAGTCAGCAAAATGTCTCCATATCCCTCTTCTCTCTTTTCCC 2431
consensus_8592#1 -TAAAACTAACTGTATACTAGTCAGCAAAATGTCTCCATATCCCTCTTCTCTCTTTTCCC 628
consensus_8592#2 CTGGTGCTAACCCAGTTGCCCTGAG-AAAGGGTATTGACAAAGCTGTTCATGAACTT--A 644
* ***** * * ** *** ** * * * ** *** **
consensus_8592#0 TTGGAGGTGCAAGGAGCATTTTTTTTCCTTCACAATTTTGTAACGTAGAAGATAGGA-TT 2490
consensus_8592#1 TTGGAGGTGCAAGGAGCATTTTTTTTCCTTCACAATTTTGTAACGTAGAAGATAGGA-TT 687
consensus_8592#2 TTGGGATCTTGAAGACTAAATGTATCCCTGTAAG----TACAAAGGAGGACATAAAAGCT 700
**** * ** * * * * *** * * ** * ** * *** * *
consensus_8592#0 ACTAATCCATTG-CAGATCCCAAAATGTTGAACGT-GCTAGTTTTATTGTACTTTTATAT 2548
consensus_8592#1 ACTAATCCATTG-CAGATCCCAAAAAGTGGAACGT-GCTAGTTTTATTGTAAAAAAAAAA 745
consensus_8592#2 GTTGCTTCAATATCAGCTGGCAATGATGAATATGTTGGCGATCTCATTGCT--------- 751
* * ** * *** * *** * ** * * * ****
consensus_8592#0 CTTCATGAATGTGCATGATGATTTGCTTGATACTACTTTAAAAAAAAAAGA 2599
consensus_8592#1 AACAATAAAAGA--------------------------------------- 757
consensus_8592#2 ---------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||