cluster # 8599

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Oryza sativa
cluster # 8599 cluster # 8599 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8599#0 length = 1365 sequences # 5
consensusID : consensus_8599#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1365
fasta sequence
                              [TCCATCCCTTCACACTGCTCCACAGCCATCCATCCCTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGAAACCCTACCGGCGTCGATCGAATCCCCTCGCCTCCGCCTCGCGCGCACGCGGGGGGTTGGGCCCGAATCGGAGGCAGACCGGCCAGGAGCGGCGGGATCCCTCGCTCCGTCGGCGCGAATCTTGGTCCGGCCATGGCGGTGGTGGGGGTGCTGGATTCTTTGGCCGCCGAGGAGCGGTGGCTGTACCCGGGGTTCCTGGCCATGTACGCCGCCATCTACTGCGTCGGCCAACTCGCCCTGCTCCGGCGGTGGGCGTGGCCGCTCCGCCTCGACGGCGCCAGCTGCCTCATCTCCCTCGCGCACGGCACGCCCGCCGCGCTCGCCGCGGCGGGCGCCATCCTCGCGCTGCCGCCGGAGGCGAGGGGGTTCGCCGCGCCCAACACCCGCCTCCAGGACCACGTCCTCGACTACAGCGTCGCCTACTTCACCATGGACCTGCTCCACTACCTCGCCTTCCTCCCCGGGGACACCCTCTTCATCGCCCACCACGTCGCCACGCTCTTCGTGTTCGTCACCTGCCGCTACCTCGTCCGCCACGGCGCCTACGCGCTCCTCGTCCTCCTCGTCCTCGCCGAGGTCACCAGCCTCCTCCAGAACGTCTGGACGCTCGCCGGGATCTGGCGCGCCGAGAAGCCCGCCGCGGCGAGGGTGTACAGGGCGCTGTCGCCGCCCTTCTACTTCATCTACACCGTCGTCAGGGGCGTCGCCGGCCCGCTCTTCTTCCTCAAGATGAGCCTCTTCTA-CCT-GTCCGGCCAGGCCGTCGACGTCATCCCGTGGTGGGTGCGCATTTCTTGGATCGTCGTCGTCGGCACCGCCATCACGGTCAGCAACCTGTGGATTTGGAACCTCTGGAAGGAGCTCTT-CAGAGAACGGAAG-CAGAGCATG-A-CGAAGAAAAGCACGTAGGTGTAT-CAAGCAA-CCAT-GCTGTAG-CATAATCT-ATCGAAATTGCA-CTGATGATCAGATGATTCAGATGACGATGGTGGATATTTTGGATGGCATTTGTGGAGAATTCTCTATATGACATAATTCTTTCATTCAGGTCAGAAATCTCAAGTCTAATTAATTAGTACTTAGTAGGGAATAGTCCAATGGGCATTCTGTCGCATGCATTGGGATTTTACTTGTTGATCATTCAGCTAAGAACACTAATCACTCCTTGATGGCGAGTTCTTTGGAGTGATGGTTCCCTTTAGCATTTAGATAAAAAAAAAATACTGTACTGCTACATATACCTCACTTGATGATTACCAATAGATGGTTCTTTGGAGTGATGGTTCCCTTCA--A--AAAAAAAAAA]

[+] EMBL AK061205             [TCCATCCCTTCACACTGCTCCACAGCCATCCATCCCTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGAAACCCTACCGGCGTCGATCGAATCCCCTCGCCTCCGCCTCGCGCGCACGCGGGGGGTTGGGCCCGAATCGGAGGCAGACCGGCCAGGAGCGGCGGGATCCCTCGCTCCGTCGGCGCGAATCTTGGTCCGGCCATGGCGGTGGTGGGGGTGCTGGATTCTTTGGCCGCCGAGGAGCGGTGGCTGTACCCGGGGTTCCTGGCCATGTACGCCGCCATCTACTGCGTCGGCCAACTCGCCCTGCTCCGGCGGTGGGCGTGGCCGCTCCGCCTCGACGGCGCCAGCTGCCTCATCTCCCTCGCGCACGGCACGCCCGCCGCGCTCGCCGCGGCGGGCGCCATCCTCGCGCTGCCGCCGGAGGCGAGGGGGTTCGCCGCGCCCAACACCCGCCTCCAGGACCACGTCCTCGACTACAGCGTCGCCTACTTCACCATGGACCTGCTCCACTACCTCGCCTTCCTCCCCGGGGACACCCTCTTCATCGCCCACCACGTCGCCACGCTCTTCGTGTTCGTCACCTGCCGCTACCTCGTCCGCCACGGCGCCTACGCGCTCCTCGTCCTCCTCGTCCTCGCCGAGGTCACCAGCCTCCTCCAGAACGTCTGGACGCTCGCCGGGATCTGGCGCGCCGAGAAGCCCGCCGCGGCGAGGGTGTACAGGGCGCTGTCGCCGCCCTTCTACTTCATCTACACCGTCGTCAGGGGCGTCGCCGGCCCGCTCTTCTTCCTCAAGATGAGCCTCTTCTA CCT GTCCGGCCAGGCCGTCGACGTCATCCCGTGGTGGGTGCGCATTTCTTGGATCGTCGTCGTCGGCACCGCCATCACGGTCAGCAACCTGTGGATTTGGAACCTCTGGAAGGAGCTCTT CAGAGAACGGAAG CAGAGCATG A CGAAGAAAAGCACGTAGGTGTAT CAAGCAA CCAT GCTGTAG CATAATCT ATCGAAATTGCA CTGATGATCAGATGATTCAGATGACGATGATGGATATTTTGGATGGCATTTGTGGAGAATTCTCTATATGACATAATTCTTTCATTCAGGTCAGAAATCTCAAGTCTAATTAATTAGTACTTAGTAGGGAATAGTCCAATGGGCATTCTGTCGCATGCATTGGGATTTTACTTGTTGATCATTCAGCTAAGAACACTAATCACTCCTTGATGGCGAGTTCTTTGGAGTGATGGTTCCCTTTAGCATTTAGATAAAAAAAAAATACTGTACTGCTACATATACCTCACTTGATGATTACCAATAGATGGTTCTTTGGAGTGAT                          ]
[-] EMBL CA762370             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           aagggGGGTGTACAGGGCGCTGTCGCCGCCCTTCTACTTCATCTACACNGTCGTCAGGGGCGTCGCCGGCCCGCTCTTCTTCCTCAAGATGAGCCTCTTCTA CCT GTCCGGCCAGGCCGTNGACGTCATCCCGTGGTGGGTGCGCATTTCTTGGATNGTTGTCGTCGGCACCGCCATCACGGTCAGCAACCTGTGGATTTGGAACCTCTGGAAGGAGCTCTT CAGAGAACGGAAG CAGAGCATG A CGAAGAAAAGCACGTAGGTGTAT CAAGCAA CCAT GCTGTAG CATAATCT ATCGAAATTGCA CTGATGATCAGATGATTCAGATGACGATGGTGGATATTTTGGATGGCATTTGTGGAGAATTCTCTATATGACATAATTCTTTCATTCAGGTCAGAAATCTCAAGTCTAATTAATTAGTACTTAGTAGGGAATAGTCCAATGGGCATTCTGTCGCATGCATTGGGATTTTACTTGTTGATCATTCAGCTAAGAACACTAATCACTCCTTGATGGCGAGTTCTTTGGAGTGATGGTTCCCTTTAGCATTTAGATAAAAAAAAAATACTGTACTGCTACATATACCTCACTTGATGATTACCAATAGATGGTTCTTTGGAGTGATGGTTCCCTTCA  A  AAAA      ]
[+] EMBL BI812499             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGCTTC CC GCCCGCTCTTCTTCCTCAAGATGA CCTCTTCTACCCTGGTCCGG CA GCCGTCGACGTCATCCC TGGTGGGTGCGCATTTCTTGGATCGTCGTCGTCGGCACCGCCATCACGGTCAGCAACCTGTGGATTTGGAACCTCTGGAAGGAGCTCTT CAGAGAACGGAAG CAGAGCATG A CGAAGAAAAGCACGTAGGTGTAT CAAGCAA CCAT GCTGTAG CATAATCT ATCGAAATTGCA CTGATGATCAGATGATTCAGATGACGATGGTGGATATTTTGGATGGCATTTGTGGAGAATTCTCTATATGACATAATTCTTTCATTCAGGTCAGAAATCTCAAGTCTAATTAATTAGTACTTAGTAGGGAATAGTCCAATGGGCATTCTGTCGCATGCATTGGGATTTTACTTGTTGATCATTCAGCTAAGAACACTAATCACTCCTTGATGGCGAGTTCTTTGGAGTGATGGTTCCCTTTAGCATTTAGATAAAAAAAAAATACTGTACTGCTACATATACCTCACTTGATGATTACC ATAGATGGTTCTTTGGAGTGATGGTTCCCTTCAGTATTACAAAAAAAA]
[+] EMBL BI802982             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCTTCCAGAGAACGGAAGCCAGAGCATGTACCGAAGAAAAGCACGTAGGTGTATCCAAGCAACCCATGGCTGTAGCCATAATCTGATCGAAATTGCACCTGATGATCAGATGATTCAGATGACGATGGTGGATATTTTGGATGGCATTTGTGGAGAATTCTCTATATGACATAATTCTTTCATTCAGGTCAGAAATCTCAAGTCTAATTAATTAGTACTTAGTAGGGAATAGTCCCATGGGCATTCTGTCGCATGCATTGGGATTTCCCCTGTTGATCATTCAGCTAAGAACACTAATCACTCCTTGATGGCGAGTTCTTTGGAGTGATGGTTCCCTTTAGCATTTAGATAAAAAAAAAATACTGTACTGCTACATATACCTCACTTGATGATTACCAATAGATGTTCCCCCCGA TGATGCTTCCCTTCA  A  AAAAAAAA  ]
[+] EMBL BI804181             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCTT CAGAGAACGGAAG CAGAGCATG A CGAAGAAAAGCACGTAGGTGTAT CAAGCAA CCAT GCTGTAG CATAATCT ATCGAAATTGCA CTGATGATCAGATGATTCAGATGACGATGGTGGATATTTTGGATGGCATTTGTGGAGAATTCTCTATATGACATAATTCTTTCATTCAGGTCAGAAATCTCAAGTCTAATTAATTAGTACTTAGTAGGGAATAGTCCCATGGGCATTCTGTCGCATGCATTGGGATTTTACTTGTTGATCATTCAGCTAAGAACACTAATCACTCCTTGATGGCGAGTTCTTTGGAGTGATGGTTCCCTTTAGCATTTAGATAAAAAAAAAATACTGTACTGCTACATATACCTCACTTGATGATTACC ATAGATGGTTCTTTGGAGTGATGGTTCCCTTCA  A  AAAAAAAA  ]




>consensus_8599#0
TCCATCCCTTCACACTGCTCCACAGCCATCCATCCCTCCGCCGCCGCCGCCGCCGCCGCC
GCCGCCGCCGCCGAAACCCTACCGGCGTCGATCGAATCCCCTCGCCTCCGCCTCGCGCGC
ACGCGGGGGGTTGGGCCCGAATCGGAGGCAGACCGGCCAGGAGCGGCGGGATCCCTCGCT
CCGTCGGCGCGAATCTTGGTCCGGCCATGGCGGTGGTGGGGGTGCTGGATTCTTTGGCCG
CCGAGGAGCGGTGGCTGTACCCGGGGTTCCTGGCCATGTACGCCGCCATCTACTGCGTCG
GCCAACTCGCCCTGCTCCGGCGGTGGGCGTGGCCGCTCCGCCTCGACGGCGCCAGCTGCC
TCATCTCCCTCGCGCACGGCACGCCCGCCGCGCTCGCCGCGGCGGGCGCCATCCTCGCGC
TGCCGCCGGAGGCGAGGGGGTTCGCCGCGCCCAACACCCGCCTCCAGGACCACGTCCTCG
ACTACAGCGTCGCCTACTTCACCATGGACCTGCTCCACTACCTCGCCTTCCTCCCCGGGG
ACACCCTCTTCATCGCCCACCACGTCGCCACGCTCTTCGTGTTCGTCACCTGCCGCTACC
TCGTCCGCCACGGCGCCTACGCGCTCCTCGTCCTCCTCGTCCTCGCCGAGGTCACCAGCC
TCCTCCAGAACGTCTGGACGCTCGCCGGGATCTGGCGCGCCGAGAAGCCCGCCGCGGCGA
GGGTGTACAGGGCGCTGTCGCCGCCCTTCTACTTCATCTACACCGTCGTCAGGGGCGTCG
CCGGCCCGCTCTTCTTCCTCAAGATGAGCCTCTTCTACCTGTCCGGCCAGGCCGTCGACG
TCATCCCGTGGTGGGTGCGCATTTCTTGGATCGTCGTCGTCGGCACCGCCATCACGGTCA
GCAACCTGTGGATTTGGAACCTCTGGAAGGAGCTCTTCAGAGAACGGAAGCAGAGCATGA
CGAAGAAAAGCACGTAGGTGTATCAAGCAACCATGCTGTAGCATAATCTATCGAAATTGC
ACTGATGATCAGATGATTCAGATGACGATGGTGGATATTTTGGATGGCATTTGTGGAGAA
TTCTCTATATGACATAATTCTTTCATTCAGGTCAGAAATCTCAAGTCTAATTAATTAGTA
CTTAGTAGGGAATAGTCCAATGGGCATTCTGTCGCATGCATTGGGATTTTACTTGTTGAT
CATTCAGCTAAGAACACTAATCACTCCTTGATGGCGAGTTCTTTGGAGTGATGGTTCCCT
TTAGCATTTAGATAAAAAAAAAATACTGTACTGCTACATATACCTCACTTGATGATTACC
AATAGATGGTTCTTTGGAGTGATGGTTCCCTTCAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case