cluster # 8600

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Oryza sativa
cluster # 8600 cluster # 8600 Sequences # 5 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8600#0 length = 417 sequences # 5

consensusID : consensus_8600#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 417
fasta sequence

                              [TTAAAGGGAATAAGCTTGCGGCCGCGGAAGCAGAACAGAACCCTCCTTCTTTTTCTTGGGAGGGACGACCTCTCTCTCTTTGAAAGGAAAGTTCTCTACAAAAGGCCCGCGCCTGTCACGCCCAGATTCTGGACACATTGCGTGATATTACTCTGAAGAATGGAGAGGAGCTCCATGAAGAAGACTATCGCACCATGCTTGATTTCATGTTGAGCCGACTCCAGTCCGACGTCAATCCCCGGGCGCTGAAGGAGCTCCTGAACAGACTCCAAAACGGTCGGGCACGATCTCAAACTTCTAGGGCGGCAAGGAGATTCCTCG-ACGAGGACTAGTGAGGCTATAGTACTGACTATGCATAGGACTACAAAGGTTCAAAGACAGGATGTATTCGACCCTTGGATGTGATCGGCAACACCA]

[+] EMBL BI306612             [TTAAAGGGAATAAGCTTGCGGCCGCGGAAGCAGAACAGAACCCTCCTTCTTTTTCTTGGGAGGGACGACCTCTCTCTCTTTGAAAGGAAAGTTCTCTACAAAAGGCCCGCGCCTGTCACGCCCAGATTCTGGACACATTGCGTGATATTACTCTGAAGAATGGAGAGGAGCTCCATGAAGAAGACTATCGCACCATGCTTGATTTCATGTTGAGCCGACTCCAGTCCGACGTCAATCCCCGGGCGCTGAAGGAGCTCCTGAACAGACTCCAAAACGGTCGGGCACGATCTCAAACTTCTAGGGCGGCAAGGAGATTCCTCG ACGAGGACTAGTGAGGCTATAGTACTGACTATGCATAGGACTACAAAGGTTCAAAGACAGGATGTATTCGACCCTTGGATGTGATCGGCA      ]
[+] EMBL BI306546             [    AGGGAATAAGCTTGCGGCCGCGGAAGCAGAACAGAACCCTCCTTCTTTTTCTTGGGAGGGACGACCTCTCTCTCTTTGAAAGGAAAGTTCTCTACAAAAGGCCCGCGCCTGTCACGCCCAGATTCTGGACACATTGCGTGATATTACTCTGAAGAATGGAGAGGAGCTCCATGAAGAAGACTATCGCACCATGCTTGATTTCATGTTGAGCCGACTCCAGTCCGACGTCAATCCCCGGGCGCTGAAGGAGCTCCTGAACAGACTCCAAAACGGTCGGGCACGATCTCAAACTTCTAGGGCGGCAAGGAGATTCCTCG ACGAGGACTAGTGAGGCTATAGTACTGACTATGCATAGGACTACAAAGGTTCAAAGACAGGATGTATTCGACCCTTGGATGTGATCGGCA      ]
[+] EMBL CB965953             [                  cacaCGCGGAAGCAGAACAGAA CCTCC TC TTTTCTTGGGAGGGACGACCTCTCTCTCTTTGAAAGGAAAGTTCTCTACAAAAGGCCCGCGCCTGTCACGCCCAGATTCTGGACACATTGCGTGATATTACTCTGAAGAATGGAGAGGAGCTCCATGAAGAAGACTATCGCACCATGCTTGATTTCATGTTGAGCCGACTCCAGTCCGACGTCAATCCCCGGGCGCTGAAGGAGCTCCTGAACAGACTCCAAAACGGTCGGGCACGATCTCAAACTTCTAGGGCGGCAAGGAGATTCCTCG ACGAGGACTAGTGAGGCTATAGTACTGACTATGCATAGGACTACAAAGGTTCAAAGACAGGATGTATTCGACCCTTGGATGTGATCGGCAA     ]
[+] EMBL CB967353             [                                  ACAGAACCCTCCTTCTTTTTCTTGGGAGGGACGACCTCTCTCTCTTTGAAAGGAAAGTTCTCTACAAAAGGCCCGCGCCTGTCACGCCCAGATTCTGGACACATTGCGTGATATTACTCTGAAGAATGGAGAGGAGCTCCATGAAGAAGACTATCGCACCATGCTTGATTTCATGTTGAGCCGACTCCAGTCCGACGTCAATCCCCGGGCGCTGAAGGAGCTCCTGAACAGACTCCAAAACGGTCGGGCACGATCTCAAACTTCTAGGGCGGCAAGGAGATTCCTCGCACGAGGACTACTGAGGCTATAGTACTGACCATGCATCGGACTACAAAGGTTCCAAGACAGGATGTATTCCACCCCCGGATGTCACCGGCAACACCA]
[+] EMBL BI306246             [                                  ACAGAACCCTCCTTCTTTTTCTTGGGAGGGACGACCTCTCTCTCTTTGAAAGGAAAGTTCTCTACAAAAGGCCCGCGCCTGTCACGCCCAGATTCTGGACACATTGCGTGATATTACTCTGAAGAATGGAGAGGAGCTCCATGAAGAAGACTATCGCACCATGCTTGATTTCATGTTGAGCCGACTCCAGTCCGACGTCAATCCCCGGGCGCTGAAGGAGCTCCTGAACAGACTCCAAAACGGTCGGGCACGATCTCAAACTTCTAGGGCGGCAAGGAGATTCCTCG ACGAGGACTAGTGAGGCTATAGTACTGACTATGCATAGGACTACAAAGGTTCAAAGACAGGATGTATTCGACCCTTGGATGTGATCGGCA      ]




>consensus_8600#0
TTAAAGGGAATAAGCTTGCGGCCGCGGAAGCAGAACAGAACCCTCCTTCTTTTTCTTGGG
AGGGACGACCTCTCTCTCTTTGAAAGGAAAGTTCTCTACAAAAGGCCCGCGCCTGTCACG
CCCAGATTCTGGACACATTGCGTGATATTACTCTGAAGAATGGAGAGGAGCTCCATGAAG
AAGACTATCGCACCATGCTTGATTTCATGTTGAGCCGACTCCAGTCCGACGTCAATCCCC
GGGCGCTGAAGGAGCTCCTGAACAGACTCCAAAACGGTCGGGCACGATCTCAAACTTCTA
GGGCGGCAAGGAGATTCCTCGACGAGGACTAGTGAGGCTATAGTACTGACTATGCATAGG
ACTACAAAGGTTCAAAGACAGGATGTATTCGACCCTTGGATGTGATCGGCAACACCA

clustalw multiple alignements is not computed in this case