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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8601#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 981 fasta sequence
[AATGGCGGCGACACGCGGCTCCGTGCGGCTCCTCCTCCTGATCCTCCTCCTCCGCCCCGCCGCGGCGGGGAGCCCACTGATGATGACGTGCGCCAAGACGCCGCACCCGGACGTGTGCATCACCGTGCTGGGCGCCATCCCGGAGTGCAGGAACACCGGCGACCCGCGCGTCCTCGCCGAGAACGCCGTCCGCTCCGCCGCCACCATCGGCGCGGCGGCGGGCACGTTCGCGCGCGCGGAGCTCGACATCGTGAAGGACACCGACATGTGGCAGTGCCTGGACGAGTGCGCGCAGGACATCGAGGAGGCCGTCTCCCACCTCGACGACACCGAGGGCGGCGTCGTCGACCTCGACGCCAAGTTCAAGGACGTGCGGCTGTTCATGGACGTCGCCGAGAGGGACACGTGGTCGTGCGAGGAGAGCTGCCGGGACGCGCCGGACTCCACCGTCAAGGCCACCCTGCTCGACAAGAACGAGGCGTTCGAGAAGTTCATGCGGGTCACCGGCGCGCTCATCGAGATGGTCATCGGAACGGCCGGCGAGCCGGCGCCGGAGCCGTCAGCTGATGAACACTCGGACGAACTAATACCGGATGTCCAGTTATGATCAATTCATAATGTACTAATCGCTCATGTGACTTCTCATCTCCAT-TTTTGATCGATCGTGTTCAGGTATTTTGATTAGGTTAATTAAGGGTGTGTTCACTTTGATGTCATTTCCAATCATACTATTTTTTTATAAAGTTG-CTAAAAAATATCTAAGTTTAGTTTGTTGCTAAATTTGATAAATACATAAGAAATCCTGTCAAAAATTTAGTAACATTGTCATCTTACTAAAATTTTGATATCACCAAAATTTAGTAAGGTTTAGTAAGGTTTATTTTCCATTTCGTCGAATGTTTTGTTTAACCATCAATAAAGTGGTTGATTCGTTCATTAGCTAACTAATAGATCATCTGATTGTAAAAAAAAAAAAAAAAA]
[+] EMBL AK107563 [AATGGCGGCGACACGCGGCTCCGTGCGGCTCCTCCTCCTGATCCTCCTCCTCCGCCCCGCCGCGGCGGGGAGCCCACTGATGATGACGTGCGCCAAGACGCCGCACCCGGACGTGTGCATCACCGTGCTGGGCGCCATCCCGGAGTGCAGGAACACCGGCGACCCGCGCGTCCTCGCCGAGAACGCCGTCCGCTCCGCCGCCACCATCGGCGCGGCGGCGGGCACGTTCGCGCGCGCGGAGCTCGACATCGTGAAGGACACCGACATGTGGCAGTGCCTGGACGAGTGCGCGCAGGACATCGAGGAGGCCGTCTCCCACCTCGACGACACCGAGGGCGGCGTCGTCGACCTCGACGCCAAGTTCAAGGACGTGCGGCTGTTCATGGACGTCGCCGAGAGGGACACGTGGTCGTGCGAGGAGAGCTGCCGGGACGCGCCGGACTCCACCGTCAAGGCCACCCTGCTCGACAAGAACGAGGCGTTCGAGAAGTTCATGCGGGTCACCGGCGCGCTCATCGAGATGGTCATCGGAACGGCCGACGAGCCGGCGCCGGAGCCGTCAGCTGATGAACACTCGGACGAACTAATACCGGATGTCCAGTTATGATCAATTCATAATGTACTAATCGCTCATGTGACTTCTCATCTCCAT TTTTGATCGATCGTGTTCAGGTATTTTGATTAGGTTAATTAAGGGCCCGTTCAATTTGACGTCATTTTCAACCATACCATTTTTTT TAAAGTTGTCAAAAAAATGTCTACGTTTAGTTTGCTACTAAATTTGATAAATATATAAGAAATCCTGCCA ]
[+] EMBL C72022 [ CAAGACGCCGCACCCGGACGTTTGCATCACCGTGCTGGGCGCCATCCCGGAGTGCAGGAACACCGGCNACCCGCGCTTCCTCGCCGAGAACGCCGTCCGCTCCGCCGCCACCATCGGCGCGGCGGCGGGCACGTTCGCNCGCNCGGAG TCGANATCGTGAAGGACACCGACATGTGGCAGTNCCTGGACGAGTGCGCGCAGGACATCGAGGAGGCCGT ]
[+] EMBL AU172439 [ CCGACATGTGGCAGTGCCTGGACGAGTGCGCGCAGGACATCGAGGAGGCCGTCTCCCACCTCGACGACACCGAGGGCGGCGTCGTCGACCTCGACGCCAAGTTCAAGGACGTGCGGCTGTTCATGGACGTCGCCGAGAGGGACACGTGGTCGTGCGAGGAGAGCTGCCGGGACGCGCCGGACTCCACCGTCAAGGCCACCCTGCTCGACAAGAACGAGGCGTTCGAGAAGTTCATGCGGGTCACCGGCGCGCTCATCGAGATGGTCATCGGAACGGCCGGCGAGCCGGCGCCGGAGCCGTCAGCTGATGAACACTCGGACGAACTAATACCGGATGTCCAGTTATGATCAATTCATAATGTACTAATCGCTCATGTGACTTCTCATCTCCAT TTTTGATCGATCGTGTTCAGGTATTTTGATTAGGTTAATTAAaaa ]
[-] EMBL CA761872 [ gaGCCAAGGGGGACACGTGGTCGTGCGAGGAGAGCTGCCGGGACGCGCCGGACTCCACCGTCAAGGCCACCCTGCTCGACAAGAACGAGGCGTTCGAGAAGTTCATGCGGGTCACCGGCGCGCTCATCGAGATGGTCATCGGATCGGCCGGCGAGCCGGCGCCGGAGCCGTCAGCTGATGAACACTCGGACGAACTAATACCGGATGTCCAGTTATGATCAATTCATAATGTACTAATCGCTCATGTCACTTCTCATCTCCATCTTTTGATCGATCGTGTCCAGGTA TTTGATTAGGTTAATTATGGGTGTGTTCACTTTGATGTCATTTCCAATCATACTATTTTTTTATAAAGTTG CTAAAAAATATCTAAGTTTAGTTTGTTGCTAAATTTGATAAATACATAAGAAATCCTGTCAAAAATTTAGTAACATTGTCATCTTACTAAAATTTTGATATCACCAAAATTTAGTAAGGTTTAGTAAGGTTTATTTTCCATTTCGTCGAATGTTTTGTTTAACCATCAATAAAGTGGTTGATTCGTTCATTAGCTAACTAATAGATCATCTGATTGTAAAAAAAAAAAAAAAAA]
[+] EMBL CA766960 [ GTCGTGCGAGGAGAGCTGCCGGGACGCGCCGGACTCCACCGTCAAGGCCACCCTGCTCGACAAGAACGAGGCGTTCGAGAAGTTCATGCGGGTCACCGGCGCGCTCATCGAGATGGTCATCGGATCGGCCGGCGAGCCGGCGCCGGAGCCGTCAGCTGATGAACACTCGGACGAACTAATACCGGATGTCCAGTTATGATCAATTCATAATGTACTAATCGCTCATGTCACTTCTCATCTCCATCTTTTGATCGATCGTGTCCAGGTA TTTGATTAGGTTAATTATGGGTGTGTTCACTTTGATGTCATTTCCAATCATACTATTTTTTTATAAAGTTG CTAAAAAATATCTAAGTTTAGTTTGTTGCTAAATTTGATAAATACATAAGAAATCCTGTCAAAAATTTAGTAACATTGTCATCTTACTAAAATTTTGATATCACCAAAATTTAGTAAGGTTTAGTAAGGTTTATTTTCCATTTCGTCGAATGTTTTGTTTAACCATCAATAAAGTGGTTGATTCGNTCATTAGCTAACTAATAGATCATCTGAT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||