These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8602#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1094 fasta sequence [TCACTGCCACTCTGCACTCTTCTCTCATCCAAAACCCCAATTTCCCACCCAAATCTATCTCTTCTCTCATCTTCTTCTCTCCTGCGGATTTGCAAATTACACACTTCTGCAAGCTAAAAAATCCAGTTTTCTTGCTCAGGCTAGTGCCTGGTTGTATCTACAGCTCAGCTCAGAAAGAAAGGAGTGGTTTTTGAGGAGTGGTTTTTGTCTACACAGCTGCTGCATATCATGCCTCCACTTGCCACAATGTCATCGCCAGGTTCGCTTCTTCTGTTGACCCCCGCTGTGTACCAGGGGATTGGGAGAAATCGTGGAGGACAAAGCCAGGAAGGACAATCTATCTCGTCTTCACGATCTCTCAAGACTAAACTCAGCGTTTCTGCCAGAGCAGTTTCTTCATGCGAAGCAT-CCATGAGAATAACATGTTGCGCAAACCAGACACAGACTGCACGAC-GCAAATC-TTTCTCT-GGACCTACCTCACCGCCATCAGGGTCAGTTAAAGAGAAAGTGAGGAGTCCAAAGCTTGACGATGGAGGCACCGGCTTCCCGCCATTCCGGTTCGGTGGAGGAGGAGGAGGTGGAGGTGGAGGCGGCAGCAACTCTGCCGGTGGATTCATCCTGTTCGTGATCGTTTTGCTTCTTGATTACCTGAGGGAGTTTGAGAGGAACCTGCAGAATGGAACAAGGAGGGGCAGTGACTATGACAATGGGCTCGCTCCCCAATAGTTGGTTTGTTTCATAGGACACTTTAGCGACGATCC---GAAATGC---AAG-TGGGC-TGA-CCCG-TAAA-CCCACTTATAAATCATTTAAGCGGGTCG-ATCCGTGGCTGGCCACTGGCCCATTTGCATCCTTATCTGAAACTCCTTTTCTGGAAATGTGTCAAGTGAAAATTGTGCCTGAGAAATGGTAATGGAGTGTAGCAGCCTTCTGGAAAGAAATGGTAATGGCATGTAGAAAGCTGAGACTGGTGTATCAAAGGCCAATGACAATAGCTACATGATATTTGAAGGGCCTTGATGAGGCAAATGAGTGACAATGGACCAGGTGTTTAAAAATGTGAATTTTTTGTTGAGATTGTTGATTGGATATGTTGCGAG] [+] EMBL AK061136 [TCACTGCCACTCTGCACTCTTCTCTCATCCAAAACCCCAATTTCCCACCCAAATCTATCTCTTCTCTCATCTTCTTCTCTCCTGCGGATTTGCAAATTACACACTTCTGCAAGCTAAAAAATCCAGTTTTCTTGCTCAGGCTAGTGCCTGGTTGTATCTACAGCTCAGCTCAGAAAGAAAGGAGTGGTTTTTGAGGAGTGGTTTTTGTCTACACAGCTGCTGCATATCATGCCTCCACTTGCCACAATGTCATCGCCAGGTTCGCTTCTTCTGTTGACCCCCGCTGTGTACCAGGGGATTGGGAGAAATCGTGGAGGACAAAGCCAGGAAGGACAATCTATCTCGTCTTCACGATCTCTCAAGACTAAACTCAGCGTTTCTGCCAGAGCAGTTTCTTCATGCGAAGCAT CCATGAGAATAACATGTTGCGCAAACCAGACACAGACTGCACGAC GCAAATC TTTCTCT GGACCTACCTCACCGCCATCAGGGTCAGTTAAAGAGAAAGTGAGGAGTCCAAAGCTTGACGATGGAGGCACCGGCTTCCCGCCATTCCGGTTCGGTGGAGGAGGAGGAGGTGGAGGTGGAGGCGGCAGCAACTCTGCCGGTGGATTCATCCTGTTCGTGATCGTTTTGCTTCTTGATTACCTGAGGGAGTTTGAGAGGAACCTGCAGAATGGAACAAGGAGGGGCAGTGACTATGACAATGGGCTCGCTCCCCAATAGTTGGTTTGTTTCATAGGACACTTTAGCGACGATCC GAAATGC AAG TGGGC TGA CCCG TAAA CCCACTTATAAATCATTTAAGCGGGTCG ATCCGTGGCTGGCCACTGGCCCATTTGCATCCTTATCTGAAACTCCTTTTCTGGAAATGTGTCAAGTGAAAATTGTGCCTGAGAAATGGTAATGGAGTGTAGCAGCCTTCTGGAAAGAAATGGTAATGGCATGTAGAAAGCTGAGACTGGTGTATCAAAGGCCAATGACAATAGCTACATGATATTTGAAGGGCCTTGATGAGGCAAATGAGTGACAATGGACCAGGTGTTTAAAAATGTGAATTTTTTGTTGAGATTGTTGATTGGATATGTTGCGAG] [+] EMBL CF305236 [ CTCTGCACTCTTCTCTCATCCAAAACCCCAATTTCCCACCCAAATCTATCTCTTCTCTCATCTTCTTCTCTCCTGCGGATTTGCAAATTACACACTTCTGCAAGCTAAAAAATCCAGTTTTCTTGCTCAGGCTAGTGCCTGGTTGTATCTACAGCTCAGCTCAGAAAGAAAGGAGTGGTTTTTGAGGAGTGGTTTTTGTCTACACAGCTGCTGCATATCATGCCTCCACTTGCCACAATGTCATCGCCAGGTTCGCTTCTTCTGTTGACCCCCGCTGTGTACCAGGGGATTGGGAGAAATCGTGGAGGACAAAGCCAGGAAGGACAATCTATCTCGTCTTCACGATCTCTCAAGACTAAACTCAGCGTTTCTGCCAGAGCAGTTTCTTCATGCGAAGCAT CCATGAGAATAACATGTTGCGCAAACCAGACACAGACTGCACGAC GCAAATC TTTCTCT GGACCTACCTCACCGCCATCAGGGTCAGTTAAAGAGAAAGTGAGGAGTCCAAAGCTTGACGATGGAGGCACCGGCTTCCCG CATTCCGGT ] [+] EMBL OSS13049A [ TGCGGATTTGCAAATTACACACTTCTGCAAGCTAAAAAATCCAGTTTTCTTGCTCAGGCTAGTGCCTGGTTGTATCTACAGCTCAGCTCAGAAAGAAAGGAGTGGTTTTTGAGGAGTGGTTTTTGTCTACACAGCTGCTGCATATCATGCCTCCACTTGCCACAATGTCATCGCCAGGTTCGCTTCTTCTGTTGACCCCCGCTGTGTACCAGGGGATTGGGAGAAATCGTGGAGGACAAAGCCAGGAAGGACAATCTATCTCGTCTTCACGATCTCTCAAGACTAAACTCAGCGTTTCTGCCAGAGCAGTTTCTTCATGCG AG ATCCCATGAGAATAACATGTTGCGCAAACCAGACACAGACTGCACGAC GNAAATC TTTCTCTGGGACCTACCTCACCGCCATCAGGGTCAGTTAAGGAGAAAGTGAGGA ] [+] EMBL AU162954 [ TGCGGATTTGCAAATTACACACTTCTGCAAGCTAAAAAATCCAGTTTTCTTGCTCAGGCTAGTGCCTGGTTGTATCTACAGCTCAGCTCAGAAAGAAAGGAGTGGTTTTTGAGGAGTGGTTTTTGTCTACACAGCTGCTGCATATCATGCCTCCACTTGCCACAATGTCATCGCCAGGTTCGCTTCTTCTGTTGACCCCCGCTGTGTACCAGGGGATTGGGAGAAATCGTGGAGGACAAAGCCAGGAAGGACAATCTATCTCGTCTTCACGATCTCTCAAGACTAAACTCAGCGTTTCTGCCAGAGCAGTTTCTTCATGCGAA NATCCCATGAGAATAACATGTTGCGCAAACCAGACACAGACTGCACGACGGCAAATCTTTTCTCT GGgac ] [+] EMBL AU088700 [ GATCCCCGGAATTGCNCAAAGTTGGGCTTGACCCCGTTAAACCCCACTTATAAATCATTTAAGCGGGTCGAATCCGTGGCT GCCACTGGCCCATTTGCATCCTTATCTGAAACTCCTTTTCTGGAAATGTGTCAAGTGAGAATTGTGCCTGAGAAATGGTAATGGAGTGTAGCAGCCTTCTGGAAAGAAATGGTAATGGCATGTAGAAAGCTGAGACTGGTGTATCAAAGGCCAATGACAATAGCTACATGATATTTGAAGGGCCTTGATGAGGCAAATGAGTGACAATGGACCAGGTGTTTAAAAATGTGAATTTTTTGTTGAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||