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Oryza sativa
cluster # 8605 cluster # 8605       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8605#0 length = 1123 sequences # 5  

consensusID : consensus_8605#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1123
fasta sequence
                              [GCAGCGCATCACGAAGCCCCCGCGACGATCCATCCATCGATCGCGACGCCGAGGGAGCGAGCAGCGCCGGCGGCAACTCCGGTAGCTCGCTCGCTTCCCCGGCCCGGCCGGAAGATATGGCCGATCACGCCGTGGTGGTGGACGACGGCGGTTCACGAAGGATGAGGCCGGCGTCCCTGTCGTCGTCGTCGGACGCCGAAGACGACGACGCCGGCAGCAAGAAGCAGTTCCTGCGGGCGGCGGGACGAGCGCTGGAGGCGGCGCCGCCCGTGCGGCGG-AGGCCGGGGAGGCCGTCGCGGCCGGTGAGGATGTTCCACACCATGTGCCGGTCGCTCCCGGTGCTGACGCCGGGGTGCGGGCGGCTGCAGCCGGCCGGGGCGGCGTGCCGGATCGCGGCGCCGTCGCGGCTGTCCCCTTCCGCCTCCCTGATGTCGAAGCTCGTGGCGTCGGCCTCCACCGGCGCCGCCGGGGCGTCGCGCCGGCGCATGACGGGGACGCTGTTCGGCTACCGCGACGCCCGCATCGCGCTGTCCCTGCAGGACAACCCGCGGTGCCAGCCGACGCTGGTGGTGGAGCTGGCGCTCCCGACGCACGCGCTGCTCCGCGACCTCGGCACCACCGCCGGCGCGCGCATCGTGCTGGAGAGCGAGAAGCGCGCGGCGGACGGCGGCGACGGCGCCGGCGCCGGCGCCAGCTCGAGGCGCGAGCGCGAGCAGCAGGACGGGTGGGTGCTCGAGGAGTCCATGTGGACCATGTCCTGCAACGGCAAGAAGGTGGGGTACGCGGTGCGGCGAGACCCGACCGACGACGACATCGCCGTGCTGGAGACTCTGTGGGCGGTGTCCATGGGCGGCGGCGTGCTCCCCGGGATCTCGGACATGGACGGGAAAGACGGCGAGATGGCGTACATGCGTGGGAGCTTCGAGCACATCATCGGCTCCAGGAACTCGGAGTCGCTCTACATGATCAGCCCGCACGGCGGCGACTGCCCGGAGCTCGCCGTGTTCTTCGTGAGGCTATGAAATTAATACACCACGCGCGTGCATGGCCATCTCTGTTTATTTTTTTAAAATCTCTTGCTACCTCCGGCCACAAATACACATTTGAAAATTTTAAACTGTTA]

[+] EMBL AK071753             [GCAGCGCATCACGAAGCCCCCGCGACGATCCATCCATCGATCGCGACGCCGAGGGAGCGAGCAGCGCCGGCGGCAACTCCGGTAGCTCGCTCGCTTCCCCGGCCCGGCCGGAAGATATGGCCGATCACGCCGTGGTGGTGGACGACGGCGGTTCACGAAGGATGAGGCCGGCGTCCCTGTCGTCGTCGTCGGACGCCGAAGACGACGACGCCGGCAGCAAGAAGCAGTTCCTGCGGGCGGCGGGACGAGCGCTGGAGGCGGCGCCGCCCGTGCGGCGG AGGCCGGGGAGGCCGTCGCGGCCGGTGAGGATGTTCCACACCATGTGCCGGTCGCTCCCGGTGCTGACGCCGGGGTGCGGGCGGCTGCAGCCGGCCGGGGCGGCGTGCCGGATCGCGGCGCCGTCGCGGCTGTCCCCTTCCGCCTCCCTGATGTCGAAGCTCGTGGCGTCGGCCTCCACCGGCGCCGCCGGGGCGTCGCGCCGGCGCATGACGGGGACGCTGTTCGGCTACCGCGACGCCCGCATCGCGCTGTCCCTGCAGGACAACCCGCGGTGCCAGCCGACGCTGGTGGTGGAGCTGGCGCTCCCGACGCACGCGCTGCTCCGCGACCTCGGCACCACCGCCGGCGCGCGCATCGTGCTGGAGAGCGAGAAGCGCGCGGCGGACGGCGGCGACGGCGCCGGCGCCGGCGCCAGCTCGAGGCGCGAGCGCGAGCAGCAGGACGGGTGGGTGCTCGAGGAGTCCATGTGGACCATGTCCTGCAACGGCAAGAAGGTGGGGTACGCGGTGCGGCGAGACCCGACCGACGACGACATCGCCGTGCTGGAGACTCTGTGGGCGGTGTCCATGGGCGGCGGCGTGCTCCCCGGGATCTCGGACATGGACGGGAAAGACGGCGAGATGGCGTACATGCGTGGGAGCTTCGAGCACATCATCGGCTCCAGGAACTCGGAGTCGCTCTACATGATCAGCCCGCACGGCGGCGACTGCCCGGAGCTCGCCGTGTTCTTCGTGAGGCTATGAAATTAATACACCACGCGCGTGCATGGCCATCTCTGTTTATTTTTTTAAAATCTCTTGCT                                          ]
[+] EMBL AK070319             [  AGCGCATCACGAAGCCCCCGCGACGATCCATCCATCGATCGCGACGCCGAGGGAGCGAGCAGCGCCGGCGGCAACTCCGGTAGCTCGCTCGCTTCCCCGGCCCGGCCGGAAGATATGGCCGATCACGCCGTGGTGGTGGACGACGGCGGTTCACGAAGGATGAGGCCGGCGTCCCTGTCGTCGTCGTCGGACGCCGAAGACGACGACGCCGGCAGCAAGAAGCAGTTCCTGCGGGCGGCGGGACGAGCGCTGGAGGCGGCGCCGCCCGTGCGGCGG AGGCCGGGGAGGCCGTCGCGGCCGGTGAGGATGTTCCACACCATGTGCCGGTCGCTCCCGGTGCTGACGCCGGGGTGCGGGCGGCTGCAGCCGGCCGGGGCGGCGTGCCGGATCGCGGCGCCGTCGCGGCTGTCCCCTTCCGCCTCCCTGATGTCGAAGCTCGTGGCGTCGGCCTCCACCGGCGCCGCCGGGGCGTCGCGCCGGCGCATGACGGGGACGCTGTTCGGCTACCGCGACGCCCGCATCGCGCTGTCCCTGCAGGACAACCCGCGGTGCCAGCCGACGCTGGTGGTGGAGCTGGCGCTCCCGACGCACGCGCTGCTCCGCGACCTCGGCACCACCGCCGGCGCGCGCATCGTGCTGGAGAGCGAGAAGCGCGCGGCGGACGGCGGCGACGGCGCCGGCGCCGGCGCCAGCTCGAGGCGCGAGCGCGAGCAGCAGGACGGGTGGGTGCTCGAGGAGTCCATGTGGACCATGTCCTGCAACGGCAAGAAGGTGGGGTACGCGGTGCGGCGAGACCCGACCGACGACGACATCGCCGTGCTGGAGACTCTGTGGGCGGTGTCCATGGGCGGCGGCGTGCTCCCCGGGATCTCGGACATGGACGGGAAAGACGGCGAGATGGCGTACATGCGTGGGAGCTTCGAGCACATCATCGGCTCCAGGAACTCGGAGTCGCTCTACATGATCAGCCCGCACGGCGGCGACTGCCCGGAGCTCGCCGTGTTCTTCGTGAGGCTATGAAATTAATACACCACGCGCGTGCATGGCCATCTCTGTTTATTTTTTTAAAATCTCTTGCTACCTCCGGCCACAAATACACATTTGAAAATTTTAAACTGTTA]
[+] EMBL C72917               [                     GCGACGATCCATCCATCGATCGCGACGCCGAGGGAGCGAGCAGCGCCGGCGGCAACTCCGGTAGCTCGCTCGCTTCCNCGGCCCGGCCGGAAGATATGGCCGATCACGCCGTGGTGGTGGACGACGGCGGTTCACGAAGGATGAGGCCGGCGTCCCTGTCGTCGTCGTCGGACGCCGAAGACGACGACGCCGGCAGCAAGAAGCAGTTCCTGCGGGCGGCGGGACGAGCGCTGGAGGCGGCGCCG CCGTGC GCGGAAGGCCGGGGAGG CGTCGCGG CGNTGAGGATGTTCCACACCATGTNCCGGTCGCTTCCGGTGCTGACGCCGGGGTGCGGGCGctt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C71738               [                                                                                                                                GCCGTGGTGGTGGACGACGGCGGTTCACGAAGGATGAGGCCGGCGTCCCTNTNGTCGTCGTCGGACGCCGAAGACGACGACGCCGGCAGCAAGAAGCAGTTCCTGCGGGCGGCGGGACGAGCGCTGGAGGCGGCGCCGCCCGTCCGG GN AGGCCGGGNAGGCCNTCGCGGCCGNTAAGGATNTTCCACACCATGTCCCGGTCGCTCCCGGTGCTGACGCCGGGTTGCGGGCGGNTGCAGCCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU182217             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACCGCCGGCGCGCGCATCGTGCTGGAGAGCGAGAAGCGCGCGGCGGACGGCGGCGACGGCGCCGGCGCCGGCGCCAGCTCGAGGCGCGAGCGCGAGCAGCAGGACGGGTGGGTGCTCGAGGAGTCCATGTGGACCATGTCCTGCAACGGCAAGAAGGTGGGGTACGCGGTGCGGCGAGACCCGACCGACGACGACATCGCCGTGCTGGAGACTCTGTGGGCGGTGTCCATGGGCGGCGGCGTGCTCCCCGGGATCTCGGACATGGACGGGAAAGACGGCGAGATGGCGTACATGCGTGGGAGCTTCGAGCACATCATCGGCTCCAGGAACTCGGAGTCGCTCTACATGATCAGCCCGCACGGCGGCGACTGCCCGGAGCTCGCCGTGTTCTTCGTGAGGCTATGAAATTAATACACCACGCGCGTGCATGGCCATCTCaaaaaaa                                                             ]


>consensus_8605#0 GCAGCGCATCACGAAGCCCCCGCGACGATCCATCCATCGATCGCGACGCCGAGGGAGCGA GCAGCGCCGGCGGCAACTCCGGTAGCTCGCTCGCTTCCCCGGCCCGGCCGGAAGATATGG CCGATCACGCCGTGGTGGTGGACGACGGCGGTTCACGAAGGATGAGGCCGGCGTCCCTGT CGTCGTCGTCGGACGCCGAAGACGACGACGCCGGCAGCAAGAAGCAGTTCCTGCGGGCGG CGGGACGAGCGCTGGAGGCGGCGCCGCCCGTGCGGCGGAGGCCGGGGAGGCCGTCGCGGC CGGTGAGGATGTTCCACACCATGTGCCGGTCGCTCCCGGTGCTGACGCCGGGGTGCGGGC GGCTGCAGCCGGCCGGGGCGGCGTGCCGGATCGCGGCGCCGTCGCGGCTGTCCCCTTCCG CCTCCCTGATGTCGAAGCTCGTGGCGTCGGCCTCCACCGGCGCCGCCGGGGCGTCGCGCC GGCGCATGACGGGGACGCTGTTCGGCTACCGCGACGCCCGCATCGCGCTGTCCCTGCAGG ACAACCCGCGGTGCCAGCCGACGCTGGTGGTGGAGCTGGCGCTCCCGACGCACGCGCTGC TCCGCGACCTCGGCACCACCGCCGGCGCGCGCATCGTGCTGGAGAGCGAGAAGCGCGCGG CGGACGGCGGCGACGGCGCCGGCGCCGGCGCCAGCTCGAGGCGCGAGCGCGAGCAGCAGG ACGGGTGGGTGCTCGAGGAGTCCATGTGGACCATGTCCTGCAACGGCAAGAAGGTGGGGT ACGCGGTGCGGCGAGACCCGACCGACGACGACATCGCCGTGCTGGAGACTCTGTGGGCGG TGTCCATGGGCGGCGGCGTGCTCCCCGGGATCTCGGACATGGACGGGAAAGACGGCGAGA TGGCGTACATGCGTGGGAGCTTCGAGCACATCATCGGCTCCAGGAACTCGGAGTCGCTCT ACATGATCAGCCCGCACGGCGGCGACTGCCCGGAGCTCGCCGTGTTCTTCGTGAGGCTAT GAAATTAATACACCACGCGCGTGCATGGCCATCTCTGTTTATTTTTTTAAAATCTCTTGC TACCTCCGGCCACAAATACACATTTGAAAATTTTAAACTGTTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)