These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8636#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1145 fasta sequence [GCATCGACGTTTTCAAATCATAGGGGGTATTTGGACTTAAAAAAAAATGAAAACGCGAATATACCAGCCGAAAGTAAAGCTGCGGCGGCTGGGGTGAATGGCTCCCTCCTCTCCCCGCCGCGACCTCGACGGCGAGGGGACCGGCGGCGGGAGCTCGGCGGCGAGGGAGAAGGAGCGGCCGAGGTCCTTCGACGAGAAGACCCGGTCGGCGTGCTGGCGGAAGGCGGCGGTGGTGATGGGCCGGCACCCGGAGCGGTGGCGGCAGGACGCCGCCGGCAACGTCGTGTGCCGCCGCTTCTGGAGCTGCCACGGCTGCCTCTGCTACGAGTACGACCACATCGTCCCCTTCTCCAAAGGAGGGGAGTCTACTGTTGACAATTGCCAGATTCTTCAGACAAGGGTGAATCGGTCAAAATCTGATAAAGCATGGATAGAGCAGGCAGAAATGCAGGGATTTTCTTGTGATATCAAGTTCACTGATAAAGAACTTGATGTGATTGAAATGGCTGTCTATGGGGATGTCATCCGTCCTGGAAAGCAATGTCGCTGCAGGACAGTAGCTGAGATGCTTGGGAAGGTGAAGTCAAAGAATCAGATGGCTGCTTGCGAGTTGCCACATAATGATGCCTCCTAGCATAAGTCATATCGTTCTGCACAACTACACCAGATTCATTATGGTCCGCACGGGCAGCAAGCCTGAGATCACTACCCTGATTTCATGCTCTATTGTGATAATGAACATATTTGACTTTAGGATCTCTTACATTGGTTGTAACACCGTTACACCAACATGGTGTGCTAGGTTAGATCAGTTCCGTGTTGATTTGTGCAATTGGACTGGCTAGTTCGGTTCCTTTCACCCTGGGTAGTTTCAACTTACATGGTACTATCTATGGTTCATTAGCTGGGTTGGTTTATCTATAGTTGGGTCTCTAGAGAATTTTAGGACCTAATAGAAAGAGAGATCGATTTTGTAATTGGTAGCCACTTGCCAGTTTGTGAAACAAAACTGAAGTGGTATGTGAGCAGTAGGAACTGTACAAGAAATGCATTGCCGAAATGTCGGAGTAACTGTAGCCTGCACGCTGCAGTTAATTGCTCTGTGACATTTGCCATTCCTATGTTCCTGGAAAATCAAAGAGGCA] [+] EMBL AK073900 [GCATCGACGTTTTCAAATCATAGGGGGTATTTGGACTTAAAAAAAAATGAAAACGCGAATATACCAGCCGAAAGTAAAGCTGCGGCGGCTGGGGTGAATGGCTCCCTCCTCTCCCCGCCGCGACCTCGACGGCGAGGGGACCGGCGGCGGGAGCTCGGCGGCGAGGGAGAAGGAGCGGCCGAGGTCCTTCGACGAGAAGACCCGGTCGGCGTGCTGGCGGAAGGCGGCGGTGGTGATGGGCCGGCACCCGGAGCGGTGGCGGCAGGACGCCGCCGGCAACGTCGTGTGCCGCCGCTTCTGGAGCTGCCACGGCTGCCTCTGCTACGAGTACGACCACATCGTCCCCTTCTCCAAAGGAGGGGAGTCTACTGTTGACAATTGCCAGATTCTTCAGACAAGGGTGAATCGGTCAAAATCTGATAAAGCATGGATAGAGCAGGCAGAAATGCAGGGATTTTCTTGTGATATCAAGTTCACTGATAAAGAACTTGATGTGATTGAAATGGCTGTCTATGGGGATGTCATCCGTCCTGGAAAGCAATGTCGCTGCAGGACAGTAGCTGAGATGCTTGGGAAGGTGAAGTCAAAGAATCAGATGGCTGCTTGCGAGTTGCCACATAATGATGCCTCCTAGCATAAGTCATATCGTTCTGCACAACTACACCAGATTCATTATGGTCCGCACGGGCAGCAAGCCTGAGATCACTACCCTGATTTCATGCTCTATTGTGATAATGAACATATTTGACTTTAGGATCTCTTACATTGGTTGTAACACCGTTACACCAACATGGTGTGCTAGGTTAGATCAGTTCCGTGTTGATTTGTGCAATTGGACTGGCTAGTTCGGTTCCTTTCACCCTGGGTAGTTTCAACTTACATGGTACTATCTATGGTTCATTAGCTGGGTTGGTTTATCTATAGTTGGGTCTCTAGAGAATTTTAGGACCTAATAGAAAGAGAGATCGATTTTGTAATTGGTAGCCACTTGCCAGTTTGTGAAACAAAACTGAAGTGGTATGTGAGCAGTAGGAACTGAACGAGAAATGCATTGCCGAAATGTCGCAGTAACTGTAGCCTGCACGCTGCAGTTAATTGCTCTGTGACATTTGCCATTCCTATGTTCCTGGAAAATCAAAGAGGCA] [+] EMBL AK064034 [ CGCGAATATACCAGCCGAAAGTAAAGCTGCGGCGGCTGGGGTGAATGGCTCCCTCCTCTCCCCGCCGCGACCTCGACGGCGAGGGGACCGGCGGCGGGAGCTCGGCGGCGAGGGAGAAGGAGCGGCCGAGGTCCTTCGACGAGAAGACCCGGTCGGCGTGCTGGCGGAAGGCGGCGGTGGTGATGGGCCGGCACCCGGAGCGGTGGCGGCAGGACGCCGCCGGCAACGTCGTGTGCCGCCGCTTCTGGAGCTGCCACGGCTGCCTCTGCTACGAGTACGACCACATCGTCCCCTTCTCCAAAGGAGGGGAGTCTACTGTTGACAATTGCCAGATTCTTCAGACAAGGGTGAATCGGTCAAAATCTGATAAAGCATGGATAGAGCAGGCAGAAATGCAGGGATTTTCTTGTGATATCAAGTTCACTGATAAAGAACTTGATGTGATTGAAATGGCTGTCTATGGGGATGTCATCCGTCCTGGAAAGCAATGTCGCTGCAGGACAGTAGCTGAGATGCTTGGGAAGGTGAAGTCAAAGAATCAGATGGCTGCTTGCGAGTTGCCACATAATGATGCCTCCTAGCATAAGTCATATCGTTCTGCACAACTACACCAGATTCATTATGGTCCGCACGGGCAGCAAGCCTGAGATCACTACCCTGATTTCATGCTCTATTGTGATAATGAACATATTTGACTTTAGGATCTCTTACATTGGTTGTAACACCGTTACACCAACATGGTGTGCTAGGTTAGATCAGTTCCGTGTTGATTTGTGCAATTGGACTGGCTAGTTC ] [+] EMBL OSC21401 [ AAGTAAAGCTGCGGCGGCTGGGGTGAATGGCTCCCTCCTCTCCCCGNCGCGACCTCGACGGCGAGGGGACCGTCGGCGGGAGCTCGGCGGCGAGGGAGAAGGAGCGGCCGAGGTCCTTCGACGAGAAGACCCGGTCGGCGTGCTGGCGGAAGGCGGCGGTGGTGATGGGCCGGCACCCGGAGCGGTGGCGGCAGGACGCCG CGGCAACGTCGTGTGCCGCCGCTTCTGGAGCTGCCACGGCTGCCTCTGCTACGAGTACGACCACATCGTCCCCTTCTCCAAAGGAGGGGAGTCTACTGTTGACAATTGCCAGATTCTTCAGACAAGGGTGAATCGGTCAAAATCTGATAAAGCATGGATAGAGCAGGCAGAAATG AAGGATTTTCTTGTGATATCAAG TCACTGATAAAG ] [+] EMBL CB096993 [ CAAAATCTGATAAAGCATGGATAGAGCAGGCAGAAATGCAGGGATTTTCTTGTGATATCAAGTTCACTGATAAAGAACTTGATGTGATTGAGATGGCTGTCTATGGGGATGTCATCCGTCCTGGAAGGCAATGTCGCTGCAGGACAGTAGCTGAGATGCTTGGGAAGGTGAAGTCAAAGAATCAGATGGCTGCTTGCGAGTTACCATATAATGATGCCTCCTAGCATAAGTCATATCGTTCTGCACAACAACACCAGATTCATTATGGTCCGCACGG AGCCTGAGATCACTACCCTGATTTCATGCTCTATTATGATAATGAACATATTTGACTTTAGGATCTCTAACATTGGTTGTAACACCGTTACACCAACATGGTGTGCTAGGTAAGATCAGTTCCGTGTTGATTTGTGCAATTGGACTGGCTAGTTTGGTTCCTTTCACCCTGGGTAGTTTCAACTTACATGGTACTATCTATGGTTCATTAGCTGGGTTGGTTTATCTATAGTTGGGTCTCTAGAGAATTTTAGGACCTAATAGAAAGAGAGATCGATTTTGTAATTGGTAGCCACTTGCCAGTTTGTGAAACAAAACTGAAGTGGTATGTGAGCAGTAGGAACTGTACAAGAAATGCATTGCCGAAATGTCGGAGTAACTGTAGCCTGCACGCTGCAGTTAATTGCTCTGTGACATTTtg ] [+] EMBL CA766561 [ CAAAATCTGATAAAGCATGGATAGAGCAGGCAGAAATGCAGGGATTTTCTTGTGATATCAAGTTCACTGATAAAGAACTTGATGTGATTGAGATGGCTGTCTATGGGGATGTCATCCGTCCTGGAAAGCAATGTCGCTGCAGGACAGTAGCTGAGATGCTTGGGAAGGTGAAGTCAAAGAATCAGATGGCTGCTTGCGAGTTACCATATAATGATGCCTCCTAGCATAAGTCATATCGTTCTGCACAACAACACCAGATTCATTATGGTCCGCACGG AGCCTGAGATCACTACCCTGATTTCATGCTCTATTATGATAATGAACATATTTGACTTTAGGATCTCTAACATTGGTTGTAACACCGTTACACCAACATGGTGTGCTAGGTAAGATCAGTTCCGTGTTGATTTGTGCAATTGGACTGGCTAGTTTGGTTCCTTTCACCCTGGGTAGTTTCAACTTACATGGTACTATCTATGGTTCATTAGCTGGGTTGGTTTATCTATAGTTGGGTCTCTAGAGAATTTTAGGACCTAATAGAAAGAGAGATCGATTTTGTAATTGGTAGCCACTTGCCAGTTTGTGAAACAAAACTGAAGTGGTATGTGAGCAGTAGGAACTGTACAAGAAATGCATTGCCGAAATGTCGGAGTAACTGTAGCCTGCACGCTGCAGNTNATTGC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||