cluster # 8647

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8647 cluster # 8647 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8647#0 length = 1766 sequences # 5
consensusID : consensus_8647#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1766
fasta sequence
                              [GATCACCCCCTAACGATATGCACACATATTGGCTTGTGCCCAAGCAAATCACGCATTTCCCAAACCAAACCACCTCCACAACCCAAATCCCCCATGACATCAACCTATTGATCCTACCATTCAATGTGATCGATCTACACACTCTTGCTAATATAACTCCAATATTCCCCCTTAATTCCGTCCTCATCCATCCTAACCACCACCTTCTTATAAATTAATTAACACAAATCATACTGATCGTTCCGCACAGGAAGATAATCATCAAGATTGATCCAAGAAGGAGCGAGAGCTTAGCTTATCTGATCAGATCAAAGATGGCGGCGATCTCTCCGGCGAGCGATGGCGTGGGGCGGCGGCGGAGGAGGGTGTTGATGTTCCCGATTCCGTTTCAGGGGCATGTCACGCCGATGCTGCAGCTGGCCGACGTGCTCCGCTCCCGCGCCGGCCTCGCCGTCACCGTCTTCCACGCCCCCGTCAACGCGCCCGCCGCCGCCGAGCAGTCGGCGGCGGAGGAGGACTACCGCTTCGTGACCGTGGGGGCCGGAGTGGC-GGGGGAGGCGGCGGCGCTGATGCCCACGGGCGGCAGCGGCAGCGACTTCGCCGGCGCGCTGATGCGCCTCGACGCGCTCCTCCGGGCGCCGTTCGACGACGCCCTCCGCCAGGCGCTCCTCGCCGACGACGAGGAGGAGGCGGCGGCGACGTGCCTAGTGGTGGACTCGAACCTGCGCGGGGTGCAGGAGGTGGCGGAGCGGCGCGGCGTGCGGACGCTGGCGCTGCGCACCGGCGGCGCGTGCTGCCTCGTGGCGTACATGGCCTTCCCGGAGCTCTGCGGCAAGGGCGTCCTCCCGCCGCTGTCGCGAGATCAGCTGCAACTGGACATGCCATTGGATGAGCTTCCACCACTTCGTCTGCGAGATATGATGTTCTCAGCAACCACCACATATGGTACAATGGCTACCTGCTTAGAACGTCTATTGGACTCGGCACGGTGTTCTTCAGGTGTCATTCTCAATACCTTCGATGACCTTGAGAATTCTGACCTCCGAAAGATCGCCAATGGCCTAAGTGTTCCGGTTTACGCGATCGGTCCACTTCACAAGATCTCCATAGGCCAAGAGAGCAGCTTGCTAACTCAAGATCAAAGCTGTTTGGAATGGTTAGACAAGCAGGAGGCAGAGTCTGTTCTTTATGTGAGCTTTGGGAGCTTGGCATCTATGGACTCTCAAGAGCTTTTGGAGACAGCGTGGGGATTGGTCGATAGCGAAATTCCGTTTCTTTGGGTGATCAGGCCTAACTCGGTCCAGGGATCAGAGCAAACATGCCTTCCAGATGGCTTTGAGGAGGCGACACGTGGCAGGGGTATGGTGGTTTCCTGGGCCCCACAACAAGATGTGCTGAAGCACCGAGCGGTTGGTGGTTTTTGGACGCACAATGGGTGGAACTCAACCCTAGAAAGTATATGTGATGGTGTTCCGATGATCTGTAGGCCTCAGTTTGCGGACCAAATGATTAATGCTAGGTATGTCCAAGAGGTATGGAAGATAGGGTTCGAGCTAGAGGGAAAACTGGAGAGGAGAATGATTGAGAGGGCTGTAAGAAGGTTACTGCGCAGTGAAGAAGGCAAGGAGATGAGGCACAGGGCAAAGGATCTGAAGAACAAAGCGACGACCTGTATTGAGAAAGGAGGCTCTTCAAATACTGCAATTGATATGTTGGTGAATCTCATAATGTCATTTTGAACATTATCTTATATCAATAAACTGTTT]

[+] EMBL AK107471             [GATCACCCCCTAACGATATGCACACATATTGGCTTGTGCCCAAGCAAATCACGCATTTCCCAAACCAAACCACCTCCACAACCCAAATCCCCCATGACATCAACCTATTGATCCTACCATTCAATGTGATCGATCTACACACTCTTGCTAATATAACTCCAATATTCCCCCTTAATTCCGTCCTCATCCATCCTAACCACCACCTTCTTATAAATTAATTAACACAAATCATACTGATCGTTCCGCACAGGAAGATAATCATCAAGATTGATCCAAGAAGGAGCGAGAGCTTAGCTTATCTGATCAGATCAAAGATGGCGGCGATCTCTCCGGCGAGCGATGGCGTGGGGCGGCGGCGGAGGAGGGTGTTGATGTTCCCGATTCCGTTTCAGGGGCATGTCACGCCGATGCTGCAGCTGGCCGACGTGCTCCGCTCCCGCGCCGGCCTCGCCGTCACCGTCTTCCACGCCCCCGTCAACGCGCCCGCCGCCGCCGAGCAGTCGGCGGCGGAGGAGGACTACCGCTTCGTGACCGTGGGGGCCGGAGTGGC GGGGGAGGCGGCGGCGCTGATGCCCACGGGCGGCAGCGGCAGCGACTTCGCCGGCGCGCTGATGCGCCTCGACGCGCTCCTCCGGGCGCCGTTCGACGACGCCCTCCGCCAGGCGCTCCTCGCCGACGACGAGGAGGAGGCGGCGGCGACGTGCCTAGTGGTGGACTCGAACCTGCGCGGGGTGCAGGAGGTGGCGGAGCGGCGCGGCGTGCGGACGCTGGCGCTGCGCACCGGCGGCGCGTGCTGCCTCGTGGCGTACATGGCCTTCCCGGAGCTCTGCGGCAAGGGCGTCCTCCCGCCGCTGTCGCGAGATCAGCTGCAACTGGACATGCCATTGGATGAGCTTCCACCACTTCGTCTGCGAGATATGATGTTCTCAGCAACCACCACATATGGTACAATGGCTACCTGCTTAGAACGTCTATTGGACTCGGCACGGTGTTCTTCAGGTGTCATTCTCAATACCTTCGATGACCTTGAGAATTCTGACCTCCGAAAGATCGCCAATGGCCTAAGTGTTCCGGTTTACGCGATCGGTCCACTTCACAAGATCTCCATAGGCCAAGAGAGCAGCTTGCTAACTCAAGATCAAAGCTGTTTGGAATGGTTAGACAAGCAGGAGGCAGAGTCTGTTCTTTATGTGAGCTTTGGGAGCTTGGCATCTATGGACTCTCAAGAGCTTTTGGAGACAGCGTGGGGATTGGTCGATAGCGAAATTCCGTTTCTTTGGGTGATCAGGCCTAACTCGGTCCAGGGATCAGAGCAAACATGCCTTCCAGATGGCTTTGAGGAGGCGACACGTGGCAGGGGTATGGTGGTTTCCTGGGCCCCACAACAAGATGTGCTGAAGCACCGAGCGGTTGGTGGTTTTTGGACGCACAATGGGTGGAACTCAACCCTAGAAAGTATATGTGATGGTGTTCCGATGATCTGTAGGCCTCAGTTTGCGGACCAAATGATTAATGCTAGGTATGTCCAAGAGGTATGGAAGATAGGGTTCGAGCTAGAGGGAAAACTGGAGAGGAGAATGATTGAGAGGGCTGTAAGAAGGTTACTGCGCAGTGAAGAAGGCAAGGAGATGAGGCACAGGGCAAAGGATCTGAAGAACAAAGCGACGACCTGTATTGAGAAAGGAGGCTCTTCAAATACTGCAATTGATATGTTGGTGAATCTCATAATGTCATTTTGAACATTATCTTATATCAATAAACTGTTT]
[+] EMBL CB636937             [                                                                          TCCACAACCCAAATCCCCCATGACATCAACCTATTGATCCTACCATTCAATGTGATCGATCTACACACTCTTGCTAATATAACTCCAATATTCCCCCTTAATTCCGTCCTCATCCATCCTAACCACCACCTTCTTATAAATTAATTAACACAAATCATACTGATCGTTCCGCACAGGAAGATAATCATCAAGATTGATCCAAGAAGGAGCGAGAGCTTAGCTTATCTGATCAGATCAAAGATGGCGGCGATCTCTCCGGCGAGCGATGGCGTGGGGCGGCGGCGGAGGAGGGTGTTGATGTTCCCGATTCCGTTTCAGGGGCATGTCACGCCGATGCTGCAGCTGGCCGACGTGCTCCGCTCCCGCGCCGGCCTCGCCGTCACCGTCTTCCACGCCCCCGTCAACGCGCCCGCCGCCGCCGAGCAGTCGGCGGCGGAGGAGGACTACCGCTTCGTGACCGTGGGGGCCGGAGTGGCGGGGGGAGGCGGCGGCGCTGATGCCCACGGGCGGCAGCGGCAGCGACTTCGCCGGCGCGCTGATGCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB641137             [                                                                          TCCACAACCCAAATCCCCCATGACATCAACCTATTGATCCTACCATTCAATGTGATCGATCTACACACTCTTGCTAATATAACTCCAATATTCCCCCTTAATTCCGTCCTCATCCATCCTAACCACCACCTTCTTATAAATTAATTAACACAAATCATACTGATCGTTCCGCACAGGAAGATAATCATCAAGATTGATCCAAGAAGGAGCGAGAGCTTAGCTTATCTGATCAGATCAAAGATGGCGGCGATCTCTCCGGCGAGCGATGGCGTGGGGCGGCGGCGGAGGAGGGTGTTGATGTTCCCGATTCCGTTTCAGGGGCATGTCACGCCGATGCTGCAGCTGGCCGACGTGCTCCGCTCCCGCGCCGGCCTCGCCGTCACCGTCTTCCACGCCCCCGTCAACGCGCCCGCCGCCGCCGAGCAGTCGGCGGCGGAGGAGGACTACCGCTTCGTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB648768             [                                                                                                                                                                                                                                                                     TCAAGATCTTTCCAAGAAGGAGCGAGAGCTTAGCTTATCTGATCAGATCAAAGATGGCGGCGATCTCTCCGGCGAGCGATGGCGTGGGGCGGCGGCGGAGGAGGGTGTTGATGTTCCCGATTCCGTTTCAGGGGCATGTCACGCCGATGCTGCAGCTGGCCGACGTGCTCCGCTCCCGCGCCGGCCTCGCCGTCACCGTCTTCCACGCCCCCGTCAACGCGCCCGCCGCCGCCGAGCAGTCGGCGGCGGAGGAGGACTACCGCTTCGTGACCGTGGGGGCCGGAGTGGC GGGGGAGGCGGCGGCGCTGATGCCCACGGGCGGCAGCGGCAGCGACTTCGCCGGCGCGCTGATGCGCCTCGACGCGCTCCTCCGGGCGCCGTTCGACGACGCCCTCCGCCAGGCGCTCCTCGCCGACGACGAGGAGGAGGCGGCGGCGACGTGCCTAGTGGTGGACTCGAACCTGCGCGGGGTGCAGGAGGTGGCGGAGCGGCGCGGCGTGCGGACGCTGGCGCTGCGCACCGGCGGCGCGTGCTGCCTCGTGGCGTACATGGCCTTCCCGGAGCTCTGCGGCAAGGGCGTCCTCCCGCCGCTGTCGCGAGATCAGCTGCAACTGGACATGCCATTGGATGAGCTTCCACCACTTCGTCTGCGAGATATGATGTTCTCAGCAACCACCACACATGGTACAATGGCTACCTGCTTAGAACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB636938             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  nAGGCAGAGTCTGTTCTTTATGTGAGCTTTGGGAGCTTGGCATCTATGGACTCTCAAGAGCTTTTGGAGACAGCGTGGGGATTGGTCGATAGCGAAATTCCGTTTCTTTGGGTGATCAGGCCTAACTCGGTCCAGGGATCAGAGCAAACATGCCTTCCAGATGGCTTTGAGGAGGCGACACGTGGCAGGGGTATGGTGGTTTCCTGGGCCCCACAACAAGATGTGCTGAAGCACCGAGCGGTTGGTGGTTTCTGGACGCACAATGGGTGGAACTCAACCCTAGAAAGTATATGTGATGGTGTTCCGATGATCTGTAGGCCTCAGTTTGCGGACCAAATGATTAATGCTAGGTATGTCCAAGAGGTATGGAAGATAGGGTTCGAGCTAGAGGGAAAACTGGAGAGGAGAATGATTGAGAGGGCTGTAAGAAGGTTACTGTGCAGTGAAGAAGGCAAGGAGATGAGGCACAGGGCAAAGGATCTGAAGAACAAAGCGACGACCTGTATTGAGAAAGGAGGCTCTTCAAATACTGCAATTGATATGTTGGTGAATCTCATAATGTCATTTTGAACATTATCTTATATCAATA        ]




>consensus_8647#0
GATCACCCCCTAACGATATGCACACATATTGGCTTGTGCCCAAGCAAATCACGCATTTCC
CAAACCAAACCACCTCCACAACCCAAATCCCCCATGACATCAACCTATTGATCCTACCAT
TCAATGTGATCGATCTACACACTCTTGCTAATATAACTCCAATATTCCCCCTTAATTCCG
TCCTCATCCATCCTAACCACCACCTTCTTATAAATTAATTAACACAAATCATACTGATCG
TTCCGCACAGGAAGATAATCATCAAGATTGATCCAAGAAGGAGCGAGAGCTTAGCTTATC
TGATCAGATCAAAGATGGCGGCGATCTCTCCGGCGAGCGATGGCGTGGGGCGGCGGCGGA
GGAGGGTGTTGATGTTCCCGATTCCGTTTCAGGGGCATGTCACGCCGATGCTGCAGCTGG
CCGACGTGCTCCGCTCCCGCGCCGGCCTCGCCGTCACCGTCTTCCACGCCCCCGTCAACG
CGCCCGCCGCCGCCGAGCAGTCGGCGGCGGAGGAGGACTACCGCTTCGTGACCGTGGGGG
CCGGAGTGGCGGGGGAGGCGGCGGCGCTGATGCCCACGGGCGGCAGCGGCAGCGACTTCG
CCGGCGCGCTGATGCGCCTCGACGCGCTCCTCCGGGCGCCGTTCGACGACGCCCTCCGCC
AGGCGCTCCTCGCCGACGACGAGGAGGAGGCGGCGGCGACGTGCCTAGTGGTGGACTCGA
ACCTGCGCGGGGTGCAGGAGGTGGCGGAGCGGCGCGGCGTGCGGACGCTGGCGCTGCGCA
CCGGCGGCGCGTGCTGCCTCGTGGCGTACATGGCCTTCCCGGAGCTCTGCGGCAAGGGCG
TCCTCCCGCCGCTGTCGCGAGATCAGCTGCAACTGGACATGCCATTGGATGAGCTTCCAC
CACTTCGTCTGCGAGATATGATGTTCTCAGCAACCACCACATATGGTACAATGGCTACCT
GCTTAGAACGTCTATTGGACTCGGCACGGTGTTCTTCAGGTGTCATTCTCAATACCTTCG
ATGACCTTGAGAATTCTGACCTCCGAAAGATCGCCAATGGCCTAAGTGTTCCGGTTTACG
CGATCGGTCCACTTCACAAGATCTCCATAGGCCAAGAGAGCAGCTTGCTAACTCAAGATC
AAAGCTGTTTGGAATGGTTAGACAAGCAGGAGGCAGAGTCTGTTCTTTATGTGAGCTTTG
GGAGCTTGGCATCTATGGACTCTCAAGAGCTTTTGGAGACAGCGTGGGGATTGGTCGATA
GCGAAATTCCGTTTCTTTGGGTGATCAGGCCTAACTCGGTCCAGGGATCAGAGCAAACAT
GCCTTCCAGATGGCTTTGAGGAGGCGACACGTGGCAGGGGTATGGTGGTTTCCTGGGCCC
CACAACAAGATGTGCTGAAGCACCGAGCGGTTGGTGGTTTTTGGACGCACAATGGGTGGA
ACTCAACCCTAGAAAGTATATGTGATGGTGTTCCGATGATCTGTAGGCCTCAGTTTGCGG
ACCAAATGATTAATGCTAGGTATGTCCAAGAGGTATGGAAGATAGGGTTCGAGCTAGAGG
GAAAACTGGAGAGGAGAATGATTGAGAGGGCTGTAAGAAGGTTACTGCGCAGTGAAGAAG
GCAAGGAGATGAGGCACAGGGCAAAGGATCTGAAGAACAAAGCGACGACCTGTATTGAGA
AAGGAGGCTCTTCAAATACTGCAATTGATATGTTGGTGAATCTCATAATGTCATTTTGAA
CATTATCTTATATCAATAAACTGTTT
clustalw multiple alignements is not computed in this case