These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8664#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1423 fasta sequence [TGCCGCCCCGCGCGGGGACACTTGTCTTCTTCCCAATAAACACACCCACGCACACAAGAAACCTCACGGAAAGCAGAGCAGCAACCCAGCCAGCGGAGGGTCAGGACTCTGGAGCGGAGCAAGAAGCAGATTGCTGTGCAAGCCGCCTCCTCCTCCTCCCCCCTGCCTCTCTCTCCTCGCCCTTCTTAACCCCGTCTCGCGAGAGAGGAGAGGAGCCACCACCACCGCCTCGACGCCGAGAACCAGCCTCGCCGTGACCCCCGGTCGCCAGGGACAGGTTACTCTCATCTTTGGTGCTTGTGAACAAGACGACAGCCACCGCTCATCAAAGAGCAAGCCATGGAGGAATCCAATGATCAGGGCCTTGCACAGAAGAGCACTGCCCCCACTGGGTTCTTCAGGGTCCCCGGCCTCTTTGTGAGGCTGAGCAGCAAAGGATTGAACGCAGTGGACCCTGATTCTGCCTGGAGCCCAACCTCTCCATTGGATTTCAAGAACCTGTCATCGAGCACTGGAAGCACAAATCTCAAATCCTCTGGGCTACTGGGTGTCGAGGCTGATCAGAAGTTCAGAACTAACCCTCCCAGAGTCGGCCTCGGCCTCGTCGACGCCCTCACCGCCGACGAGAGCTCCTCGTGCTTGGGTGTCACGAGCTCGTTTCTTGATTCCATCAGGCCATTTCTTGAGCTCGGGTTGCCGAAGGCGGCGAGTGATGCTGCAATGCAGAAGAACGGTTCAGGTAGCGTCACTCTGGACGAGATTGCAGACTTTGCTCTGTCTGAAGAGTACACCTGTGTGATCGAGCACGGCCCGAACCCGAGGACGACGCACATTCTGGGAGACGAGACACTGGAGGTGTGCAAGGGTGTCCCAAGGAGTTCCAAGAAGTCAATCTTCACCATCGAGCCCATCGGCGAGCTGCCGTCGACGCTGGCGTGTGCTGTTTCCCGCTCATGCTGCTACTGCAGGAAGAGGCTGCAGCAGGACAGGGATATCTACATGTATCTGGGAGAGAAGGCATTCTGCAGCAACGAGTGCAGGAGGGACTACATCGATGAGGAGATCGAGGAGGTGGAGGAGCTCATGATGCTGGATTCTGCCGGTTCTTCTGCCCTCTTGGCTTGGTGAAAATCGGCAGTAGATGACTAGAAGTAGTAGTAGTAGTGCTGGTGAGTGGTGGTGCAGGAAAGCGACTACTACCTCTTTTGGATGGAGATTCAGGTTTTGGTAGGGAAAGGAAGGAAAACATGCTTCCCGTTCTAGTTTTTCTGAATGGAGAAGTTTTTAATTTAGCCGGTTTGTGCAAACAGAAGTGCAACGGCTAAATGATTTTCATGGATTGTGTGGGGATTCCCCATTTTGCCTGTAAGACGAGCAAACCCCCCATAATTTCACAGCAAACAGTTCTCCCTGCTGAATTCTC] [+] EMBL AK073213 [TGCCGCCCCGCGCGGGGACACTTGTCTTCTTCCCAATAAACACACCCACGCACACAAGAAACCTCACGGAAAGCAGAGCAGCAACCCAGCCAGCGGAGGGTCAGGACTCTGGAGCGGAGCAAGAAGCAGATTGCTGTGCAAGCCGCCTCCTCCTCCTCCCCCCTGCCTCTCTCTCCTCGCCCTTCTTAACCCCGTCTCGCGAGAGAGGAGAGGAGCCACCACCACCGCCTCGACGCCGAGAACCAGCCTCGCCGTGACCCCCGGTCGCCAGGGACAGGTTACTCTCATCTTTGGTGCTTGTGAACAAGACGACAGCCACCGCTCATCAAAGAGCAAGCCATGGAGGAATCCAATGATCAGGGCCTTGCACAGAAGAGCACTGCCCCCACTGGGTTCTTCAGGGTCCCCGGCCTCTTTGTGAGGCTGAGCAGCAAAGGATTGAACGCAGTGGACACTGATTCTGCCTGGAGCCCAACCTCTCCATTGGATTTCAAGAACCTGTCATCGAGCACTGGAAGCACAAATCTCAAATCCTCTGGGCTACTGGGTGTCGAGGCTGATCAGAAGTTCAGAACTAACCCTCCCAGAGTCGGCCTCGGCCTCGTCGACGCCCTCACCGCCGACGAGAGCTCCTCGTGCTTGGGTGTCACGAGCTCGTTTCTTGATTCCATCAGGCCATTTCTTGAGCTCGGGTTGCCGAAGGCGGCGAGTGATGCTGCAATGCAGAAGAACGGTTCAGGTAGCGTCACTCTGGACGAGATTGCAGACTTTGCTCTGTCTGAAGAGTACACCTGTGTGATCGAGCACGGCCCGAACCCGAGGACGACGCACATTCTGGGAGACGAGACACTGGAGGTGTGCAAGGGTGTCCCAAGGAGTTCCAAGAAGTCAATCTTCACCATCGAGCCCATCGGCGAGCTGCCGTCGACGCTGGCGTGTGCTGTTTCCCGCTCATGCTGCTACTGCAGGAAGAGGCTGCAGCAGGACAGGGATATCTACATGTATCTGGGAGAGAAGGCATTCTGCAGCAACGAGTGCAGGAGGGACTACATCGATGAGGAGATCGAGGAGGTGGAGGAGCTCATGATGCTGGATTCTGCCGGTTCTTCTGCCCTCTTGGCTTGGTGAAAATCGGCAGTAGATGACTAGAAGTAGTAGTAGTAGTGCTGGTGAGTGGTGGTGCAGGAAAGCGACTACTACCTCTTTTGGATGGAGATTCAGGTTTTGGTAGGGAAAGGAAGGAAAACATGCTTCCCGTTCTAGTTTTTCTGAATGGAGAAGTTTTTAATTTAGCCGGTTTGTGCAAACAGAAGTGCAACGGCTAAATGATTTTCATGGATTGTGTGGGGATTCCCCATTTTGCCTGTAAGACGAGCAAACCCCCCATAATTTCACAGCAAA ] [+] EMBL AK060700 [ CAGCGGAGGGTCAGGACTCTGGAGCGGAGCAAGAAGCAGATTGCTGTGCAAGCCGCCTCCTCCTCCTCCCCCCTGCCTCTCTCTCCTCGCCCTTCTTAACCCCGTCTCGCGAGAGAGGAGAGGAGCCACCACCACCGCCTCGACGCCGAGAACCAGCCTCGCCGTGACCCCCGGTCGCCAGGGACAGGTTACTCTCATCTTTGGTGCTTGTGAACAGGACGACAGCCACCGCTCATCAAAGAGCAAGCCATGGAGGAATCCAATGATCAGGGCCTTGCACAGAAGAGCACTGCCCCCACTGGGTTCTTCAGGGTCCCCGGCCTCTTTGTGAGGCTGAGCAGCAAAGGATTGAACGCAGTGGACCCTGATTCTGCCTGGAGCCCAACCTCTCCATTGGATTTCAAGAACCTGTCATCGAGCACTGGAAGCACAAATCTCAAATCCTCTGGGCTACTGGGTGTCGAGGCTGATCAGAAGTTCAGAACTAACCCTCCCAGAGTCGGCCTCGGCCTCGTCGACGCCCTCACCGCCGACGAGAGCTCCTCGTGCTTGGGTGTCACGAGCTCGTTTCTTGATTCCATCAGGCCATTTCTTGAGCTCGGGTTGCCGAAGGCGGCGAGTGATGCTGCAATGCAGAAGAACGGTTCAGGTAGCGTCACTCTGGACGAGATTGCAGACTTTGCTCTGTCTGAAGAGTACACCTGTGTGATCGAGCACGGCCCGAACCCGAGGACGACGCACATTCTGGGAGACGAGACACTGGAGGTGTGCAAGGGTGTCCCAAGGAGTTCCAAGAAGTCAATCTTCACCATCGAGCCCATCGGCGAGCTGCCGTCGACGCTGGCGTGTGCTGTTTCCCGCTCATGCTGCTACTGCAGGAAGAGGCTGCAGCAGGACAGGGATATCTACATGTATCTGGGAGAGAAGGCATTCTGCAGCAACGAGTGCAGGAGGGACTACATCGATGAGGAGATCGAGGAGGTGGAGGAGCTCATGATGCTGGATTCTGCCGGTTCTTCTGCCCTCTTGGCTTGGTGAAAATCGGCAGTAGATGACTAGAAGTAGTAGTAGTAGTGCTGGTGAGTGGTGGTGCAGGAAAGCGACTACTACCTCTTTTGGATGGAGATTCAGGTTTTGGTAGGGAAAGGAAGGAAAACATGCTTCCCGTTCTAGTTTTTCTGAATGGAGAAGTTTTTAATTTAGCCGGTTTGTGCAAACAGAGGTGCAACGGCTAAATGATTTTCATGGATTGTGTGGGGATTCCCCATTTTGCCTGTAAGACGAGCAAACCCCCCATAATTTCACAGCAAACAGTTCTCCCTGCTGAATTCTC] [+] EMBL AK102023 [ AGCCGCCTCCTCCTCCTCCCCCCTGCCTCTCTCTCCTCGCCCTTCTTAACCCCGTCTCGCGAGAGAGGAGAGGAGCCACCACCACCGCCTCGACGCCGAGAACCAGCCTCGCCGTGACCCCCGGTCGCCAGGGACAGGTTACTCTCATCTTTGGTGCTTGTGAACAAGACGACAGCCACCGCTCATCAAAGAGCAAGCCATGGAGGAATCCAATGATCAGGGCCTTGCACAGAAGAGCACTGCCCCCACTGGGTTCTTCAGGGTCCCCGGCCTCTTTGTGAGGCTGAGCAGCAAAGGATTGAACGCAGTGGACCCTGATTCTGCCTGGAGCCCAACCTCTCCATTGGATTTCAAGAACCTGTCATCGAGCACTGGAAGCACAAATCTCAAATCCTCTGGGCTACTGGGTGTCGAGGCTGATCAGAAGTTCAGAACTAACCCTCCCAGAGTCGGCCTCGGCCTCGTCGACGCCCTCACCGCCGACGAGAGCTCCTCGTGCTTGGGTGTCACGAGCTCGTTTCTTGATTCCATCAGGCCATTTCTTGAGCTCGGGTTGCCGAAGGCGGCGAGTGATGCTGCAATGCAGAAGAACGGTTCAGGTAGCGTCACTCTGGACGAGATTGCAGACTTTGCTCTGTCTGAAGAGTACACCTGTGTGATCGAGCACGGCCCGAACCCGAGGACGACGCACATTCTGGGAGACGAGACACTGGAGGTGTGCAAGGGTGTCCCAAGGAGTTCCAAGAAGTCAATCTTCACCATCGAGCCCATCGGCGAGCTGCCGTCGACGCTGGCGTGTGCTGTTTCCCGCTCATGCTGCTACTGCAGGAAGAGGCTGCAGCAGGACAGGGATATCTACATGTATCTGGGAGAGAAGGCATTCTGCAGCAACGAGTGCAGGAGGGACTACATCGATGAGGAGATCGAGGAGGTGGAGGAGCTCATGATGCTGGATTCTGCCGGTTCTTCTGCCCTCTTGGCTTGGTGAAAATCGGCAGTAGATGACTAGAAGTAGTAGTAGTAGTGCTGGTGAGTGGTGGTGCAGGAAAGCGACTACTACCTCTTTTGGATGGAGATTCAGGTTTTGGTAGGGAAAGGAAGGAAAACATGCTTCCCGTTCTAGTTTTTCTGAATGGAGAAGTTTTTAATTTAGCCGGTTTGTGCAAACAGAAGTGCAACGGCTAAATGATTTTCATGGATTGTGTGGGGATTCCCCATTTTGCCTGTAAGACGAGCAAACCCCCCATAATTTCACAGCAAACAGTT ] [+] EMBL CF318849 [ CCACCGCCTCGACGCCGAGAACCAGCCTCGCCGTGACCCCCGGTCGCCAGGGACAGGTTACTCTCATCTTTGGTGCTTGTGAACAAGACGACAGCCACCGCTCATCAAAGAGCAAGCCATGGAGGAATCCAATGATCAGGGCCTTGCACAGAAGAGCACTGCCCCCACTGGGTTCTTCAGGGTCCCCGGCCTCTTTGTGAGGCTGAGCAGCAAAGGATTGAACGCAGTGGACCCTGATTCTGCCTGGAGCCCAACCTCTCCATTGGATTTCAAGAACCTGTCATCGAGCACTGGAAGCACAAATCTCAAATCCTCTGGGCTACTGGGTGTCGAGGCTGATCAGAAGTTCAGAACTAACCCTCCCAGAGTCGGCCTCGGCCTCGTCGACGCCCTCACCGCCGACGAGAGCTCCTCGTGCTTGGGTGTCACGAGCTCGTTTCTTGATTCCATCAGGCCATTTCTTGAGCTCGGGTTGCCGAAGGCGGCGAGTGATGCT ] [-] EMBL CF318848 [ GGTGCAGGAAAGCGAATACTACCTCTTTTGGATGGAGATTCAGGTTTTGGTAGGGAAAGGAAGGAAAACATGCTTCCCGTTCTAGTTTTTCTGAATGGAGAAGTTTTTAATTTAGCCGGTTTGTGCAAACAGAAGTGCAACGGCTAAATGATTTTCATGGATTGTGTGGGGATTCCCCATTTTGCCTGTAAGACGAGCAAACCCCCCATAATTTCACAGCAAACAGTTCTCCCaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||