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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8674#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3713 fasta sequence
[TCCCCTCCACCCGCGCCATCTCTGCCGCGCACCCCGCCTCTGCCGCATTCAATCCACCGTGCATCCGCACAGCAACGACAAATCCTCAAAACGAACGCGCCTCTCCCCGCCACCGCGCATCCATCCATCCATCGGCACCGGAGGTTTCGCCGGAGCTATCGCATCTCCCATTCTTCCCCTCCCCTTTGTATATCCTCCTCACTCCAACACGGCGCCGGGCACCGGTCCTCCTCGCGGTCTCCGCCGTCGCTGTCCATCTTCCACCGGTAATACCCGCCGCTGCCTCCTCCACTCCGCCCGCATCGCCGTCCAATCACCGCGCTGTCACGACACGATTCGACCTCAACCACGGCGCTGCCTCCTGCACTCCTGCCACTCAGATGTCACCCACGTGATCCGGCCCTCAAGCCCGATGTGGCCAGCTGATCTTATCCCCTCCCCCATCAGTGAAGGATTATTAGGGACAAAAGGATCATTGATTCTCATGTCCAAAAGGTGTTCGATGAAATGCTGCTAATAGATGGTTCGTTGGACATGATTTGTTCCTTGACATGATCAATGTGTTGCCCAAGCTCCAGATGACACGGTATAATGCTTCTGCTCTGGTCCTGAGGCCTGACTATTGCTGCCTATGCTGAGTTCTAATAAAAAAATATAAGTGTTTTGGAAGACTGCAAGGACCATGGATGCCATTCGTTGTTGGGGCTTATCCCATAGTAAAAATGTAAACAAGAGCTTTGGCAAGGTTAGTTGTCACTAATTTCTCTTCCATGATTTTGCTGCACTTGCATGTAATTTCGAGGATTGGGTTCAATCCATATCGTTTAGTGTGTGCAGCAAAATTCAAGTCAGCTTGTAGCATGAAACATATGTAAAGGTGCCTTGAAACAAAGGACAAGGATAGGTGCCTAATCACCCATATTAGCACCTACGCAATATGAATGATTGAGAGTAATTTTCTCTAGGTAGAAAATGTGCAGTACATGGGTTTGTTGTATTGTTTAGTTATATGCTTTTGGAAGCTTTTTCAAAGTTGTTCCCTTGGCGATACATTTAAGTGTACCTGCTGTTTATATTAATTATTTTCTCTCAACACACTTAATGACACTAATGATTTGTAAATTGCGAATATCATTATTTTCTCTGCTGATATTTGCATCCTTCATGTCAGTGGCAGATGCTCATGGCATGTGTGATATGGAGTTAGGCATGAAAAAATTATAAGATTACTGTGATGTTTAGTATTGCTTGGAGTGACTAAATCGGATTAAGTGATTGACAAATTGGCAAATAATTGATATTAATAGAGTAGCTCACTCCATTTTATCTGACTTTTTTTTCTTAGGGGTAATCGAACGCCTATGTCAAATTTGAGTTCATGTATATTTATACCTATTTGTGACTTCTATTTGGCTTTCTCTATTGAATATCAAGGAGCCCTTATTCTTTATTGATAGTACTCATGTTACATGGTGGAATGCATTTTCAGGGCAGGTTGTATTCCAAAGTAGGTCTTTGTGCTGCCCAGTTGTATGTTTCAGCGTCATATCGCTCTTATCTGGTGATTTCTGGCCCATGTGAGCACTTTATTTCTTAACTCCGGTTTCTTTTTTCTGCCAACCAATTTCTTATGGGAAAATATCTTATTACTGTAATAAGGCAGTGTATCCATTTCCTAATCTTTTGATACAAATAGATGTTTGTGTTGGGTAGAGGATTCTTACATCCAAAAATATTTCGTGATTGTACCAGCATAGATATAGCCTTCGTGGAACAATCAACATTTTAGACATACAAAACCTATATTCCTTTCCCTCCCTTCATTATGTGTCAGTTCTTAAAAAAATGGATAGTTTAATTGTTGGTTCTGTACAATATGGTAACAAACTGCTCCATGGCATCCTGAAAAGGGTTGATTTCCTTCTATTCACATTTTTATTTTCATCAAGGGAAAGATTCAAACTACCTCATTATTCTTTCCTTTTTTTTTTGTTTTTAAGCAATTTTTGTATGAACTACCCATACATAGTTGTGCACATATTTTGCTACTATTCTAGCTTGTCAAGGATATGAACTCTTATCAATGCCAGCATTGAGTGCAGCTGTTTGGGTTTACAGGACAAAGAAGATAGAGGGGAGGGGCAAAAGAGAAAAGCCCGTGGAAAATGGGCTGGCGCCTCATTGAGCCAGGTTGACGCAGTACCATGCCTTATAATTGATAATGTACGCACTTTTGTGTTTTTTTTCAATCATTGTCTCAAATGAACTAGCAGCTTCGATACGCCAGTTCACACTATTGTAAATTTGTAATGCGTATCGAAGGTAGTGTGATTCACCCGAAAGGATTTTATAGGAATCATCCAAATTGACATGTTACTATGGTGTATGAAACTCTATTTTTATCTCGAGATTTTGTTGGAGTGTACTGCCTTTCTAGGTCACTATTGTTCTCTCTGTACACACACATAATACTAAAACGTGCCTTGCACGTGCACGATAACTAGTATATATAGAGAACCAGTTTGACATCGAATGGTTTGGAGAATAGAACTGAACAAAAATGAATGTCCAAAAAGAATTGAACTCGTCGTGGCATGGATGAAATTTTCTCACAGGTTTCTCTCAGTGGTCAATGGATGGAGTATGACTGAGTTTTCCATGGTCGATTTGGTTGGTTGCATGAAGAAAGGCACCGAGCATAAGAAGCAGTTGTTCTCTGAACTAGTAGTTTTCTCCGAGTATGAGATAGTTTTATCAGTATAGTTTTGACCCTTGCAATAGTTGGATCACGAGCCAGCCACCGGTTGTACCGTCCTTAGCATTGCTGGTAAGATACTTGTAAGAGCTTGATAAGATATTTCTATTTGTTAGCCTCCATTACAATCCATATTTTGTAGTTAATAGGGATAATACTATTATGTTGTTCTCTGTTTTCTACAGACAATGGCAGGTATTCTACAGACAATGAGAAAAAGTTAGATGGGGGACAAACCATAATTGCTACATCATTGCAGAGGGAAGGGCGCCGCCGTTGCCTCTATATGGGGAGCCTGCCACTTCCCCTCCAGCCAGATCTGGCGGATCAGAGAGGGTCATCGCCATCGCCTGGATCCGTCGGCTAGGAGAGCAGAGTAGTCATCTCTGTTGCCGCCACGGTGGGGAGGAGGCACGGTGGAGGCAGGTGGGGAGAGGCCGCGGTAGGGGGCGGGTGGGAGTGTGTCTAGGATGTGGAGGACGGAGGAGAAGGGGGTGAGTGCGGCAGCAGTGTGGAGGAGAACTGTGGGGATAATGCTGACTGGGAGCAGATAAGGTTGGTTGGTTCGGTCGGCACCTTCTGGTTTTTTTAGTAGGTGTTCATTTTTAAATAAACTAATACCTATAATATGAGTGTATGTGTAGGTTCGTAAAAACTGGGACCTATAATATATTATAGGTGTCGGCTCTTCTGACTGATAGTAATACTATAGGTGCCGATTTTTATCGAGGGTGCATGTGTGGGCAGAAAAAGCACTATAGGTGCTGGTTTTAGCTATCCTGACACCTATAATACCATCTTCTTTGTTTCTCTCTGTAGTAGGGAATGTCATTACTATTACTTTGTCACAATGTTAGTTTACTTTATGTATTTCTAAATAAATATTCATATATGTATGTTGCTGATGCCATGGGTAGGGAAGCAAAGAAATAACAAGCTTTATGTTGTGCACTGATTC]
[+] EMBL AK069235 [TCCCCTCCACCCGCGCCATCTCTGCCGCGCACCCCGCCTCTGCCGCATTCAATCCACCGTGCATCCGCACAGCAACGACAAATCCTCAAAACGAACGCGCCTCTCCCCGCCACCGCGCATCCATCCATCCATCGGCACCGGAGGTTTCGCCGGAGCTATCGCATCTCCCATTCTTCCCCTCCCCTTTGTATATCCTCCTCACTCCAACACGGCGCCGGGCACCGGTCCTCCTCGCGGTCTCCGCCGTCGCTGTCCATCTTCCACCGGTAATACCCGCCGCTGCCTCCTCCACTCCGCCCGCATCGCCGTCCAATCACCGCGCTGTCACGACACGATTCGACCTCAACCACGGCGCTGCCTCCTGCACTCCTGCCACTCAGATGTCACCCACGTGATCCGGCCCTCAAGCCCGATGTGGCCAGCTGATCTTATCCCCTCCCCCATCAGTGAAGGATTATTAGGGACAAAAGGATCATTGATTCTCATGTCCAAAAGGTGTTCGATGAAATGCTGCTAATAGATGGTTCGTTGGACATGATTTGTTCCTTGACATGATCAATGTGTTGCCCAAGCTCCAGATGACACGGTATAATGCTTCTGCTCTGGTCCTGAGGCCTGACTATTGCTGCCTATGCTGAGTTCTAATAAAAAAATATAAGTGTTTTGGAAGACTGCAAGGACCATGGATGCCATTCGTTGTTGGGGCTTATCCCATAGTAAAAATGTAAACAAGAGCTTTGGCAAGGTTAGTTGTCACTAATTTCTCTTCCATGATTTTGCTGCACTTGCATGTAATTTCGAGGATTGGGTTCAATCCATATCGTTTAGTGTGTGCAGCAAAATTCAAGTCAGCTTGTAGCATGAAACATATGTAAAGGTGCCTTGAAACAAAGGACAAGGATAGGTGCCTAATCACCCATATTAGCACCTACGCAATATGAATGATTGAGAGTAATTTTCTCTAGGTAGAAAATGTGCAGTACATGGGTTTGTTGTATTGTTTAGTTATATGCTTTTGGAAGCTTTTTCAAAGTTGTTCCCTTGGCGATACATTTAAGTGTACCTGCTGTTTATATTAATTATTTTCTCTCAACACACTTAATGACACTAATGATTTGTAAATTGCGAATATCATTATTTTCTCTGCTGATATTTGCATCCTTCATGTCAGTGGCAGATGCTCATGGCATGTGTGATATGGAGTTAGGCATGAAAAAATTATAAGATTACTGTGATGTTTAGTATTGCTTGGAGTGACTAAATCGGATTAAGTGATTGACAAATTGGCAAATAATTGATATTAATAGAGTAGCTCACTCCATTTTATCTGACTTTTTTTTCTTAGGGGTAATCGAACGCCTATGTCAAATTTGAGTTCATGTATATTTATACCTATTTGTGACTTCTATTTGGCTTTCTCTATTGAATATCAAGGAGCCCTTATTCTTTATTGATAGTACTCATGTTACATGGTGGAATGCATTTTCAGGGCAGGTTGTATTCCAAAGTAGGTCTTTGTGCTGCCCAGTTGTATGTTTCAGCGTCATATCGCTCTTATCTGGTGATTTCTGGCCCATGTGAGCACTTTATTTCTTAACTCCGGTTTCTTTTTTCTGCCAACCAATTTCTTATGGGAAAATATCTTATTACTGTAATAAGGCAGTGTATCCATTTCCTAATCTTTTGATACAAATAGATGTTTGTGTTGGGTAGAGGATTCTTACATCCAAAAATATTTCGTGATTGTACCAGCATAGATATAGCCTTCGTGGAACAATCAACATTTTAGACATACAAAACCTATATTCCTTTCCCTCCCTTCATTATGTGTCAGTTCTTAAAAAAATGGATAGTTTAATTGTTGGTTCTGTACAATATGGTAACAAACTGCTCCATGGCATCCTGAAAAGGGTTGATTTCCTTCTATTCACATTTTTATTTTCATCAAGGGAAAGATTCAAACTACCTCATTATTCTTTCCTTTTTTTTTTGTTTTTAAGCAATTTTTGTATGAACTACCCATACATAGTTGTGCACATATTTTGCTACTATTCTAGCTTGTCAAGGATATGAACTCTTATCAATGCCAGCATTGAGTGCAGCTGTTTGGGTTTACAGGACAAAGAAGATAGAGGGGAGGGGCAAAAGAGAAAAGCCCGTGGAAAATGGGCTGGCGCCTCATTGAGCCAGGTTGACGCAGTACCATGCCTTATAATTGATAATGTACGCACTTTTGTGTTTTTTTTCAATCATTGTCTCAAATGAACTAGCAGCTTCGATACGCCAGTTCACACTATTGTAAATTTGTAATGCGTATCGAAGGTAGTGTGATTCACCCGAAAGGATTTTATAGGAATCATCCAAATTGACATGTTACTATGGTGTATGAAACTCTATTTTTATCTCGAGATTTTGTTGGAGTGTACTGCCTTTCTAGGTCACTATTGTTCTCTCTGTACACACACATAATACTAAAACGTGCCTTGCACGTGCACGATAACTAGTATATATAGAGAACCAGTTTGACATCGAATGGTTTGGAGAATAGAACTGAACAAAAATGAATGTCCAAAAAGAATTGAACTCGTCGTGGCATGGATGAAATTTTCTCACAGGTTTCTCTCAGTGGTCAATGGATGGAGTATGACTGAGTTTTCCATGGTCGATTTGGTTGGTTGCATGAAGAAAGGCACCGAGCATAAGAAGCAGTTGTTCTCTGAACTAGTAGTTTTCTCCGAGTATGAGATAGTTTTATCAGTATAGTTTTGACCCTTGCAATAGTTGGATCACGAGCCAGCCACCGGTTGTACCGTCCTTAGCATTGCTGGTAAGATACTTGTAAGAGCTTGATAAGATATTTCTATTTGTTAGCCTCCATTACAATCCATATTTTGTAGTTAATAGGGATAATACTATTATGTTGTTCTCTGTTTTCTACAGACAATGGCAGGTATTCTACAGACAATGAGAAAAAGTTAGATGGGGGACAAACCATAATTGCTACATCATTGCAGAGGGAAGGGCGCCGCCGTTGCCTCTATATGGGGAGCCTGCCACTTCCCCTCCAGCCAGATCTGGCGGATCAGAGAGGGTCATCGCCATCGCCTGGATCCGTCGGCTAGGAGAGCAGAGTAGTCATCTCTGTTGCCGCCACGGTGGGGAGGAGGCACGGTGGAGGCAGGTGGGGAGAGGCCGCGGTAGGGGGCGGGTGGGAGTGTGTCTAGGATGTGGAGGACGGAGGAGAAGGGGGTGAGTGCGGCAGCAGTGTGGAGGAGAACTGTGGGGATAATGCTGACTGGGAGCAGATAAGGTTGGTTGGTTCGGTCGGCACCTTCTGGTTTTTTTAGTAGGTGTTCATTTTTAAATAAACTAATACCTATAATATGAGTGTATGTGTAGGTTCGTAAAAACTGGGACCTATAATATATTATAGGTGTCGGCTCTTCTGACTGATAGTAATACTATAGGTGCCGATTTTTATCGAGGGTGCATGTGTGGGCAGAAAAAGCACTATAGGTGCTGGTTTTAGCTATCCTGACACCTATAATACCATCTTCTTTGTTTCTCTCTGTAGTAGGGAATGTCATTACTATTACTTTGTCACAATGTTAGTTTACTTTATGTATTTCTAAATAAATATTCATATATGTATGTTGCTGATGCCATGGGTAGGGAAGCAAAGAAATAACAAGCTTTATGTTGTGCACTGATTC]
consensusID : consensus_8674#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1036 fasta sequence
[AAACGAACGCGCCTCTCCCCGCCACCGCGCATCCATCCATCCATCGGCACCGGAGGTTTCGCCGGAGCTATCGCATCTCCCATTCTTCCCCTCCCCTTTGTATATCCTCCTCACTCCAACACGGCGCCGGGCACCGGTCCTCCTCGCGGTCTCCGCCGTCGCTGTCCATCTTCCACCGGTAATACCCGCCGCTGCCTCCTCCACTCCGCCCGCATCGCCGTCCAATCACCGCGCTGTCACGACACGATTCGACCTCAACCACGGCGCTGCCTCCTGCACTCCTGCCACTCAGATGTCACCCACGTGATCCGGCCCTCAAGCCCGATGTGGCCAGCTGATCTTATCCTCTCCCCCATCAGTGAAGTCTATTTTCAGGATTATTAGGGACAAAAGGATCATTGATTCTCATGTCCAAAAGGTGTTCGATGAAATGCTGCTAATAGATGGTTCGTTGGACATGATTTGTTCCTTGACATGATCAATGTGTTGCCCAAGCTCCAGATGACACGGTATAATGCTTCTGCTCTGGTCCTGAGGCCTGACTATTGCTGCCTATGCTGAGTTCTAATAAAAAAATATAAGTGTTTTGGAAGACTGCAAGGACCATGGATGCCATTCGTTGTTGGGGCTTATCCCATAGTAAAAATGTAAACAAGAGCTTTGGCAAGGGCAGGTTGTATTCCAAAGTAGGTCTTTGTGCTGCCCAGTTGTATGTTTCAGCGTCATATCGCTCTTATCTGGTGATTTCTGGCCCATGACAAAGAAGATAGAGGGGAGGGGCAAAAGAGAAAAGCCCGTGGAAAATGGGCTGGCGCCTCATTGAGCCAGGTTGACGCAGTACCATGCCTTATAATTGATAATGTACGCACTTTTGTGTTTTTTTTTCAATCATTGTCTCAAATGAACTAGCAGCTTCGATACGCCAGTTCACACTATTGTAAATTTGTAATGCGTATCGAAGGTAGTGTGATTCACCCGAAAGGATTTTATAGGAATCATCCAAATTGACATGTTACTATGGTGTATGAAACTCTAT]
[+] EMBL AK061424 [AAACGAACGCGCCTCTCCCCGCCACCGCGCATCCATCCATCCATCGGCACCGGAGGTTTCGCCGGAGCTATCGCATCTCCCATTCTTCCCCTCCCCTTTGTATATCCTCCTCACTCCAACACGGCGCCGGGCACCGGTCCTCCTCGCGGTCTCCGCCGTCGCTGTCCATCTTCCACCGGTAATACCCGCCGCTGCCTCCTCCACTCCGCCCGCATCGCCGTCCAATCACCGCGCTGTCACGACACGATTCGACCTCAACCACGGCGCTGCCTCCTGCACTCCTGCCACTCAGATGTCACCCACGTGATCCGGCCCTCAAGCCCGATGTGGCCAGCTGATCTTATCCTCTCCCCCATCAGTGAAGTCTATTTTCAGGATTATTAGGGACAAAAGGATCATTGATTCTCATGTCCAAAAGGTGTTCGATGAAATGCTGCTAATAGATGGTTCGTTGGACATGATTTGTTCCTTGACATGATCAATGTGTTGCCCAAGCTCCAGATGACACGGTATAATGCTTCTGCTCTGGTCCTGAGGCCTGACTATTGCTGCCTATGCTGAGTTCTAATAAAAAAATATAAGTGTTTTGGAAGACTGCAAGGACCATGGATGCCATTCGTTGTTGGGGCTTATCCCATAGTAAAAATGTAAACAAGAGCTTTGGCAAGGGCAGGTTGTATTCCAAAGTAGGTCTTTGTGCTGCCCAGTTGTATGTTTCAGCGTCATATCGCTCTTATCTGGTGATTTCTGGCCCATGACAAAGAAGATAGAGGGGAGGGGCAAAAGAGAAAAGCCCGTGGAAAATGGGCTGGCGCCTCATTGAGCCAGGTTGACGCAGTACCATGCCTTATAATTGATAATGTACGCACTTTTGTGTTTTTTTTTCAATCATTGTCTCAAATGAACTAGCAGCTTCGATACGCCAGTTCACACTATTGTAAATTTGTAATGCGTATCGAAGGTAGTGTGATTCACCCGAAAGGATTTTATAGGAATCATCCAAATTGACATGTTACTATGGTGTATGAAACTCTAT]
[+] EMBL AK069253 [ TCCTCGCGGTCTCCGCCGTCGCTGTCCATCTTCCACCGGTAATACCCGCCGCTGCCTCCTCCACTCCGCCCGCATCGCCGTCCAATCACCGCGCTGTCACGACACGATTCGACCTCAACCACGGCGCTGCCTCCTGCACTCCTGCCACTCAGATGTCACCCACGTGATCCGGCCCTCAAGCCCGATGTGGCCAGCTGATCTTATCCCCTCCCCCATCAGTGAAGTCTATTTTCAGGATTATTAGGGACAAAAGGATCATTGATTCTCATGTCCAAAAGGTGTTCGATGAAATGCTGCTAATAGATGGTTCGTTGGACATGATTTGTTCCTTGACATGATCAATGTGTTGCCCAAGCTCCAGATGACACGGTATAATGCTTCTGCTCTGGTCCTGAGGCCTGACTATTGCTGCCTATGCTGAGTTCTAATAAAAAAATATAAGTGTTTTGGAAGACTGCAAGGACCATGGATGCCATTCGTTGTTGGGGCTTATCCCATAGTAAAAATGTAAACAAGAGCTTTGGCAAGGGCAGGTTGTATTCCAAAGTAGGTCTTTGTGCTGCCCAGTTGTATGTTTCAGCGTCATATCGCTCTTATCTGGTGATTTCTGGCCCATGACAAAGAAGATAGAGGGGAGGGGCAAAAGAGAAAAGCCCGTGGAAAATGGGCTGGCGCCTCATTGAGCCAGGTTGACGCAGTACCATGCCTTATAATTGATAATGTACGCACTTTTGTG TTTTTTTTCAATCATTGTCTCAAATGAACTAGCAGCTTCGATACGCCAGTTCACACTATTGTAAATTTGTAATGCGTATCGAAGGTAGTGTGATTC ]
consensusID : consensus_8674#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 901 fasta sequence
[GTGCATCCGCACAGCAACGACAAATCCTCAAAACGAACGCGCCTCTCCCCGCCACCGCGCATCCATCCATCCATCGGCACCGGAGGTTTCGCCGGAGCTATCGCATCTCCCATTCTTCCCCTCCCCTTTGTATATCCTCCTCACTCCAACACGGCGCCGGGCACCGGTCCTCCTCGCGGTCTCCGCCGTCGCTGTCCATCTTCCACCGGTAATACCCGCCGCTGCCTCCTCCACTCCGCCCGCATCGCCGTCCAATCACCGCGCTGTCACGACACGATTCGACCTCAACCACGGCGCTGCCTCCTGCACTCCTGCCACTCAGATGTCACCCACGTGATCCGGCCCTCAAGCCCGATGTGGCCAGCTGATCTTATCCCCTCCCCCATCAGTGAAGGATTATTAGGGACAAAAGGATCATTGATTCTCATGTCCAAAAGGTGTTCGATGAAATGCTGCTAATAGATGGTTCGTTGGACATGATTTGTTCCTTGACATGATCAATGTGTTGCCCAAGCTCCAGATGACACGACTGCAAGGACCATGGATGCCATTCGTTGTTGGGGCTTATCCCATAGTAAAAATGTAAACAAGAGCTTTGGCAGGGACAAAGAAGATAGAGGGGAGGGGCAAAAGAGAAAAGCCCGTGGAAAATGGGCTGGCGCCTCATTGAGCCAGGTTGACGCAGTACCATGCCTTATAATTGATAATGTACGCACTTTTGTGTTTTTTTTCAATCATTGTCTCAAATGAACTAGCAGCTTCGATACGCCAGTTCACACTATTGTAAATTTGTAATGCGTATCGAAGGTAGTGTGATTCACCCGAAAGGATTTTATAGGAATCATCCAAATTGACATGTTACTATGGTGTATGAAACTATATTTTTATCTCGAGAAAAAAA]
[+] EMBL CF294140 [GTGCATCCGCACAGCAACGACAAATCCTCAAAACGAACGCGCCTCTCCCCGCCACCGCGCATCCATCCATCCATCGGCACCGGAGGTTTCGCCGGAGCTATCGCATCTCCCATTCTTCCCCTCCCCTTTGTATATCCTCCTCACTCCAACACGGCGCCGGGCACCGGTCCTCCTCGCGGTCTCCGCCGTCGCTGTCCATCTTCCACCGGTAATACCCGCCGCTGCCTCCTCCACTCCGCCCGCATCGCCGTCCAATCACCGCGCTGTCACGACACGATTCGACCTCAACCACGGCGCTGCCTCCTGCACTCCTGCCACTCAGATGTCACCCACGTGATCCGGCCCTCAAGCCCGATGTGGCCAGCTGATCTTATCCCCTCCCCCATCAGTGAAGGATTATTAGGGACAAAAGGATCATTGATTCTCATGTCCAAAAGGTGTTCGATGAAATGCTGCTAATAGATGGTTCGTTGGACATGATTTGTTCCTTGACATGATCAATGTGTTGCCCAAGCTCCAGATGACACGACTGCAAGGACCATGGATGCCATTCGTTGTTGGGG ]
[-] EMBL CF294141 [ CATGATTTGTTCCTTGACATGATCAATGTGTTGCCCAAGCTCCAGATGACACGACTGCAAGGACCATGGATGCCATTCGTTGTTGGGGCTTATCCCATAGTAAAAATGTAAACAAGAGCTTTGGCAGGGACAAAGAAGATAGAGGGGAGGGGCAAAAGAGAAAAGCCCGTGGAAAATGGGCTGGCGCCTCATTGAGCCAGGTTGACGCAGTACCATGCCTTATAATTGATAATGTACGCACTTTTGTGTTTTTTTTCAATCATTGTCTCAAATGAACTAGCAGCTTCGATACGCCAGTTCACACTATTGTAAATTTGTAATGCGTATCGAAGGTAGTGTGATTCACCCGAAAGGATTTTATAGGAATCATCCAAATTGACATGTTACTATGGTGTATGAAACTATATTTTTATCTCGAGAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ----------------------------------------------------------GT 2
consensus_8674#0 TCCCCTCCACCCGCGCCATCTCTGCCGCGCACCCCGCCTCTGCCGCATTCAATCCACCGT 60
consensus_8674#1 ----------------------------AAACGAACGCGCCTCTCCCCGCCACCGCGCAT 32
consensus_8674#2 GCATCCGCACAGCAACGACAAATCCTCAAAACGAACGCGCCTCTCCCCGCCACCGCGCAT 62
consensus_8674#0 GCATCCGCACAGCAACGACAAATCCTCAAAACGAACGCGCCTCTCCCCGCCACCGCGCAT 120
********************************
consensus_8674#1 CCATCCATCCATCGGCACCGGAGGTTTCGCCGGAGCTATCGCATCTCCCATTCTTCCCCT 92
consensus_8674#2 CCATCCATCCATCGGCACCGGAGGTTTCGCCGGAGCTATCGCATCTCCCATTCTTCCCCT 122
consensus_8674#0 CCATCCATCCATCGGCACCGGAGGTTTCGCCGGAGCTATCGCATCTCCCATTCTTCCCCT 180
************************************************************
consensus_8674#1 CCCCTTTGTATATCCTCCTCACTCCAACACGGCGCCGGGCACCGGTCCTCCTCGCGGTCT 152
consensus_8674#2 CCCCTTTGTATATCCTCCTCACTCCAACACGGCGCCGGGCACCGGTCCTCCTCGCGGTCT 182
consensus_8674#0 CCCCTTTGTATATCCTCCTCACTCCAACACGGCGCCGGGCACCGGTCCTCCTCGCGGTCT 240
************************************************************
consensus_8674#1 CCGCCGTCGCTGTCCATCTTCCACCGGTAATACCCGCCGCTGCCTCCTCCACTCCGCCCG 212
consensus_8674#2 CCGCCGTCGCTGTCCATCTTCCACCGGTAATACCCGCCGCTGCCTCCTCCACTCCGCCCG 242
consensus_8674#0 CCGCCGTCGCTGTCCATCTTCCACCGGTAATACCCGCCGCTGCCTCCTCCACTCCGCCCG 300
************************************************************
consensus_8674#1 CATCGCCGTCCAATCACCGCGCTGTCACGACACGATTCGACCTCAACCACGGCGCTGCCT 272
consensus_8674#2 CATCGCCGTCCAATCACCGCGCTGTCACGACACGATTCGACCTCAACCACGGCGCTGCCT 302
consensus_8674#0 CATCGCCGTCCAATCACCGCGCTGTCACGACACGATTCGACCTCAACCACGGCGCTGCCT 360
************************************************************
consensus_8674#1 CCTGCACTCCTGCCACTCAGATGTCACCCACGTGATCCGGCCCTCAAGCCCGATGTGGCC 332
consensus_8674#2 CCTGCACTCCTGCCACTCAGATGTCACCCACGTGATCCGGCCCTCAAGCCCGATGTGGCC 362
consensus_8674#0 CCTGCACTCCTGCCACTCAGATGTCACCCACGTGATCCGGCCCTCAAGCCCGATGTGGCC 420
************************************************************
consensus_8674#1 AGCTGATCTTATCCTCTCCCCCATCAGTGAAGTCTATTTTCAGGATTATTAGGGACAAAA 392
consensus_8674#2 AGCTGATCTTATCCCCTCCCCCATCAGTGAAG-----------GATTATTAGGGACAAAA 411
consensus_8674#0 AGCTGATCTTATCCCCTCCCCCATCAGTGAAG-----------GATTATTAGGGACAAAA 469
************** ***************** *****************
consensus_8674#1 GGATCATTGATTCTCATGTCCAAAAGGTGTTCGATGAAATGCTGCTAATAGATGGTTCGT 452
consensus_8674#2 GGATCATTGATTCTCATGTCCAAAAGGTGTTCGATGAAATGCTGCTAATAGATGGTTCGT 471
consensus_8674#0 GGATCATTGATTCTCATGTCCAAAAGGTGTTCGATGAAATGCTGCTAATAGATGGTTCGT 529
************************************************************
consensus_8674#1 TGGACATGATTTGTTCCTTGACATGATCAATGTGTTGCCCAAGCTCCAGATGACACGGTA 512
consensus_8674#2 TGGACATGATTTGTTCCTTGACATGATCAATGTGTTGCCCAAGCTCCAGATGACACG--- 528
consensus_8674#0 TGGACATGATTTGTTCCTTGACATGATCAATGTGTTGCCCAAGCTCCAGATGACACGGTA 589
*********************************************************
consensus_8674#1 TAATGCTTCTGCTCTGGTCCTGAGGCCTGACTATTGCTGCCTATGCTGAGTTCTAATAAA 572
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 TAATGCTTCTGCTCTGGTCCTGAGGCCTGACTATTGCTGCCTATGCTGAGTTCTAATAAA 649
consensus_8674#1 AAAATATAAGTGTTTTGGAAGACTGCAAGGACCATGGATGCCATTCGTTGTTGGGGCTTA 632
consensus_8674#2 ---------------------ACTGCAAGGACCATGGATGCCATTCGTTGTTGGGGCTTA 567
consensus_8674#0 AAAATATAAGTGTTTTGGAAGACTGCAAGGACCATGGATGCCATTCGTTGTTGGGGCTTA 709
***************************************
consensus_8674#1 TCCCATAGTAAAAATGTAAACAAGAGCTTTGGCAAGGGCAGGTTGTA-----TTCCAAAG 687
consensus_8674#2 TCCCATAGTAAAAATGTAAACAAGAGCTTTGGCAGGG----------------------- 604
consensus_8674#0 TCCCATAGTAAAAATGTAAACAAGAGCTTTGGCAAGGTTAGTTGTCACTAATTTCTCTTC 769
********************************** **
consensus_8674#1 TAGGTCTTTGTGCTGCCCAGTTGTATGTTTCAGCGTCATATCGCTCTTATCTGGTGATTT 747
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 CATGATTTTGCTGCACTTGCATGTAATTTCGAGGATTGGGTTCAATCCATATCGTTTAGT 829
consensus_8674#1 CTGGCCCATGA----CAAAGAAGATAGAGGGGAGGGGCAAAAGAGAAAAGCCCGTGGAAA 803
consensus_8674#2 ----------A----CAAAGAAGATAGAGGGGAGGGGCAAAAGAGAAAAGCCCGTGGAAA 650
consensus_8674#0 GTGTGCAGCAAAATTCAAGTCAGCTTGTAGCATGAAACATATGTAAAGGTGCCTTGAAAC 889
* *** ** * * * * ** * * ** ** ** **
consensus_8674#1 ATGGGCT-------GGCGCCTCATTGAGCCAGGTTG------ACGCAGTACCA-TGCCTT 849
consensus_8674#2 ATGGGCT-------GGCGCCTCATTGAGCCAGGTTG------ACGCAGTACCA-TGCCTT 696
consensus_8674#0 AAAGGACAAGGATAGGTGCCTAATC-ACCCATATTAGCACCTACGCAATATGAATGATTG 948
* ** ** **** ** * *** ** ***** ** * ** *
consensus_8674#1 A---TAATT-------GATAATGTACGCACTTT-TGTGTTTTTTTTTCAATCATTGTCTC 898
consensus_8674#2 A---TAATT-------GATAATGTACGCACTTT-TGTGTTTTTTTT-CAATCATTGTCTC 744
consensus_8674#0 AGAGTAATTTTCTCTAGGTAGAAAATGTGCAGTACATGGGTTTGTTGTATTGTTTAGTTA 1008
* ***** * ** * * * * ** *** ** * * ** *
consensus_8674#1 AAATGAACTAGCAGCTTCGATACGCCAGTTCACACTATTGTAAATTT----GTAATGCGT 954
consensus_8674#2 AAATGAACTAGCAGCTTCGATACGCCAGTTCACACTATTGTAAATTT----GTAATGCGT 800
consensus_8674#0 TATGCTTTTGGAAGCTTTTTCAAAGTTGTTCCCTTGGCGATACATTTAAGTGTACCTGCT 1068
* * * ***** * **** * ** **** *** *
consensus_8674#1 ATCGAAGGTAGTGTGATTCACCCGAAAGGATT--TTATAGGAATCATCC--AAATTG-AC 1009
consensus_8674#2 ATCGAAGGTAGTGTGATTCACCCGAAAGGATT--TTATAGGAATCATCC--AAATTG-AC 855
consensus_8674#0 GTTTATATTAATTATTTTCTCTCAACACACTTAATGACACTAATGATTTGTAAATTGCGA 1128
* * ** * *** * * * * ** * * * *** ** ******
consensus_8674#1 ATGTTACTATGGTGTATGAAACTCTAT--------------------------------- 1036
consensus_8674#2 ATGTTACTATGGTGTATGAAACTATATTTTTATCTCGAGAAAAAAA-------------- 901
consensus_8674#0 ATATCATTATTTTCTCTGCTGATATTTGCATCCTTCATGTCAGTGGCAGATGCTCATGGC 1188
** * * *** * * ** * * *
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 ATGTGTGATATGGAGTTAGGCATGAAAAAATTATAAGATTACTGTGATGTTTAGTATTGC 1248
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 TTGGAGTGACTAAATCGGATTAAGTGATTGACAAATTGGCAAATAATTGATATTAATAGA 1308
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 GTAGCTCACTCCATTTTATCTGACTTTTTTTTCTTAGGGGTAATCGAACGCCTATGTCAA 1368
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 ATTTGAGTTCATGTATATTTATACCTATTTGTGACTTCTATTTGGCTTTCTCTATTGAAT 1428
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 ATCAAGGAGCCCTTATTCTTTATTGATAGTACTCATGTTACATGGTGGAATGCATTTTCA 1488
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 GGGCAGGTTGTATTCCAAAGTAGGTCTTTGTGCTGCCCAGTTGTATGTTTCAGCGTCATA 1548
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 TCGCTCTTATCTGGTGATTTCTGGCCCATGTGAGCACTTTATTTCTTAACTCCGGTTTCT 1608
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 TTTTTCTGCCAACCAATTTCTTATGGGAAAATATCTTATTACTGTAATAAGGCAGTGTAT 1668
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 CCATTTCCTAATCTTTTGATACAAATAGATGTTTGTGTTGGGTAGAGGATTCTTACATCC 1728
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 AAAAATATTTCGTGATTGTACCAGCATAGATATAGCCTTCGTGGAACAATCAACATTTTA 1788
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 GACATACAAAACCTATATTCCTTTCCCTCCCTTCATTATGTGTCAGTTCTTAAAAAAATG 1848
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 GATAGTTTAATTGTTGGTTCTGTACAATATGGTAACAAACTGCTCCATGGCATCCTGAAA 1908
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 AGGGTTGATTTCCTTCTATTCACATTTTTATTTTCATCAAGGGAAAGATTCAAACTACCT 1968
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 CATTATTCTTTCCTTTTTTTTTTGTTTTTAAGCAATTTTTGTATGAACTACCCATACATA 2028
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 GTTGTGCACATATTTTGCTACTATTCTAGCTTGTCAAGGATATGAACTCTTATCAATGCC 2088
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 AGCATTGAGTGCAGCTGTTTGGGTTTACAGGACAAAGAAGATAGAGGGGAGGGGCAAAAG 2148
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 AGAAAAGCCCGTGGAAAATGGGCTGGCGCCTCATTGAGCCAGGTTGACGCAGTACCATGC 2208
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 CTTATAATTGATAATGTACGCACTTTTGTGTTTTTTTTCAATCATTGTCTCAAATGAACT 2268
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 AGCAGCTTCGATACGCCAGTTCACACTATTGTAAATTTGTAATGCGTATCGAAGGTAGTG 2328
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 TGATTCACCCGAAAGGATTTTATAGGAATCATCCAAATTGACATGTTACTATGGTGTATG 2388
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 AAACTCTATTTTTATCTCGAGATTTTGTTGGAGTGTACTGCCTTTCTAGGTCACTATTGT 2448
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 TCTCTCTGTACACACACATAATACTAAAACGTGCCTTGCACGTGCACGATAACTAGTATA 2508
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 TATAGAGAACCAGTTTGACATCGAATGGTTTGGAGAATAGAACTGAACAAAAATGAATGT 2568
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 CCAAAAAGAATTGAACTCGTCGTGGCATGGATGAAATTTTCTCACAGGTTTCTCTCAGTG 2628
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 GTCAATGGATGGAGTATGACTGAGTTTTCCATGGTCGATTTGGTTGGTTGCATGAAGAAA 2688
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 GGCACCGAGCATAAGAAGCAGTTGTTCTCTGAACTAGTAGTTTTCTCCGAGTATGAGATA 2748
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 GTTTTATCAGTATAGTTTTGACCCTTGCAATAGTTGGATCACGAGCCAGCCACCGGTTGT 2808
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 ACCGTCCTTAGCATTGCTGGTAAGATACTTGTAAGAGCTTGATAAGATATTTCTATTTGT 2868
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 TAGCCTCCATTACAATCCATATTTTGTAGTTAATAGGGATAATACTATTATGTTGTTCTC 2928
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 TGTTTTCTACAGACAATGGCAGGTATTCTACAGACAATGAGAAAAAGTTAGATGGGGGAC 2988
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 AAACCATAATTGCTACATCATTGCAGAGGGAAGGGCGCCGCCGTTGCCTCTATATGGGGA 3048
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 GCCTGCCACTTCCCCTCCAGCCAGATCTGGCGGATCAGAGAGGGTCATCGCCATCGCCTG 3108
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 GATCCGTCGGCTAGGAGAGCAGAGTAGTCATCTCTGTTGCCGCCACGGTGGGGAGGAGGC 3168
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 ACGGTGGAGGCAGGTGGGGAGAGGCCGCGGTAGGGGGCGGGTGGGAGTGTGTCTAGGATG 3228
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 TGGAGGACGGAGGAGAAGGGGGTGAGTGCGGCAGCAGTGTGGAGGAGAACTGTGGGGATA 3288
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 ATGCTGACTGGGAGCAGATAAGGTTGGTTGGTTCGGTCGGCACCTTCTGGTTTTTTTAGT 3348
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 AGGTGTTCATTTTTAAATAAACTAATACCTATAATATGAGTGTATGTGTAGGTTCGTAAA 3408
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 AACTGGGACCTATAATATATTATAGGTGTCGGCTCTTCTGACTGATAGTAATACTATAGG 3468
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 TGCCGATTTTTATCGAGGGTGCATGTGTGGGCAGAAAAAGCACTATAGGTGCTGGTTTTA 3528
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 GCTATCCTGACACCTATAATACCATCTTCTTTGTTTCTCTCTGTAGTAGGGAATGTCATT 3588
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 ACTATTACTTTGTCACAATGTTAGTTTACTTTATGTATTTCTAAATAAATATTCATATAT 3648
consensus_8674#1 ------------------------------------------------------------
consensus_8674#2 ------------------------------------------------------------
consensus_8674#0 GTATGTTGCTGATGCCATGGGTAGGGAAGCAAAGAAATAACAAGCTTTATGTTGTGCACT 3708
consensus_8674#1 -----
consensus_8674#2 -----
consensus_8674#0 GATTC 3713
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||