|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8676#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2945 fasta sequence
[GAGGAGGCCGGCTGCGCTGCGCTGCGCGATGGAACCGGAGAGGGAGGCATCGTCGGAGTGGGGAGATGGTGTCGGGGCGCTGGGTTTCCGGGTGAAGGCGTCTTCGCGCGAGCCGGCGGCGCAGAAGGCGGCCAATGTGCTGGAGCCGGACCTGCGTTCCCACTGGTCCACCGCCACCAACACCAAGGAGTGGATCCTGCTCGAGCTCAGCGAGCCGTGCCTCCTCTCCCACATCCGCATCTACAACAAGTCCGTCCTCGAGTGGGAGATCACTGCCGGCCTGCGCTACAACAAGCCAGATACCTTCGTCAAGGTTCGCCCGCGCTGCGAGGCTCCCAAGCGCGACATACTCTATCCTGCCAACCACACCCCTTGCCGCTACGTCCGCATCTCTTGTATGCGCGGCAACCCTATCGCCATCTTCTTCATCCAGCTCATTGGAATCCCTATACCTGGACTGGAACCTGACCTCCAGCCTCTAGTCAACTACCTATTGCCACATATCACTGCACACAAACAATCCTCTCAAAATATCCACCTCCAGTTACTCAAAGACATTGCAAGCAGGCTACCACCATTTCTGCCCCAGATTGAGGCTGACCTCGCTAGTGTCACAGACACTCCAGAGAGCAGTGTACACTTTTTGGCTCTGCTTGCTGGGCCATTTTATCCAATCCTCCAACTTACAAATGAAAGGGATTTTACTAAATCATTAATTAGCTCTGCTGATTCAGATGCTCTGAAAAGTAGTTTGGCTTCTACTCCAACGGTTTCTTCAAACTTTGAGACACAACCTAGGAGATCACGGAGTCCATCTTCTGTTCAGCCTGCTTGTTTTCTGGCATTTCGATCTGAAACAGCCGTACTGCTCTTAAGGAAAGCACACAGAGACAGAGCCCTTGGAATTGTTTGCCTGAAAGCATCAAAGGTCCTGCAAGAACTTCTGGAGCCCGATCCATTGTTAGATGATGCTTCTGACCAAGTACTTTGTACAGACTACTCTAGTTTGTTTGGAGATGAATTTAACTTATCGGAGAATTGCTTTGATGCCTCTATTCTGAACATTTTGGATATTGCTGCTGTTGAAGAAGGCATTCTTCATATACTATATGCAGCTTCATCACAGCCTCTGTTATGTTGCAAGCTTGCTGAGAAAGGTTCAGACATGTGGTCTGTCTTACCACTTGTTCAAGCTCTGCTTCCAGCACTTCGTCCTCCACTTAGCCCTGGTTCTACTGAACAGATTGATGGTTGTCTTAGCCAATGGAATCATCCAAATGTTCATAAAGCTCTCTCTCAGATTGCTACAATGTCAATGTCATCATCAGTTCTTCATCCTCTTCTCAGAGCCTGTGCTGGTTATCTTTCATCCTACCTGTCATCACATGCAAAAGCAGCCTGTGTTTTGCTTGACTTATGCAGGGGACCATTATCACCGTGGGTACCCATGATCACGGCAAAGGTAGACCTTGCCATTGAACTTCTGGAGGATCTCCTGGGTATTATCCAGGGAGTTGGTCAATCTCTTACTCGTTCTCGTGCAGCACTGAAGTATATTGCATTGGCCATATCTGGCCATATGGATGATGTTCTCACAGAATATAAAGACGTCAAACATAAGTTACTTTTCATTCTGGAGATGCTAGATCCTTTTATTGATCCTTCTGTAAGTGTTATGACAGATGCAATGGCATTTGGTGATGTGTCTGTTGTGCATTTGGAGAAGCAAGCAAGCGCTTGCAATATTTCGTTAAATATTATTCGTACAGCAGTGAAGAGGCCTGCTGTTCTCCCTTCTTTAGAACTTGAATGGCGTCGTGGTGCTGTTGCCACAAGTGTTATTCTCTCTACCTTGGATCCGCATATGCCACTCCCTCCTGACATAGACCTCTGCAAAAGTTCGATGCCTGAGATTGATCAAATATCTCTGATAGTTCCAAACTGTCCACCGCACTCCTGCAGTGCTGAAGATGCTGATGGGCGTGATACATCTGAAACAACTCCCAGGGAAGATATTCTTGAACAGTGCAATTCTTTATTTGCTCCAGAAGAATTAGAGCAATCTGAGTTGACAAAGACTTTGGAAGAAAAAAAGCATGAGAAAATAAGTACAGATTTGGACCAGAACTTCCCAGAGGACACAAAAAGTAATGGAAAATTACCAGCTGGCCTTTTTCAGTTAGATAATATTTTTGCTGCTGATTACTATGATGCACATGCTGATTATCTGCAGCTGGTGAACTATCAGGACTGTGAATTAAGAGCTCTAGAATTTCAGCGCTTAGCACTGAATCTATGCACACAACAAGAACCTACAGTTGAGGGGCATAATGCTGGAATAGATGCTTTTCTGTTAGCTGCTGAATGCTATGTTAATCCACTCTTTCTCTTGGATTTCCATTCTAATTCGGAGTCTTTGGATGAAATTGAACGTATTCATGCAGAATTGATCCAAGGAAATTGTTTCTCTGAGGCGAAACATCTGCGTGCTAAAGATATTGATCTCATGAAAATTTATAATTTGGAGAATAAACGAGATAAAGCGGTCCTGGATTTACTCATGCAAGCTGCAAGATATGATTTTGAATACCAGGGAAAGATACCTGATGGGAAACCTTTTCCAGATGATGTTGAAGATGGCAAGCAATATATAGAAATTTCACCAGAGGCTAGACACCTTGCTGATGCTGTAACTTTGGTCAGAAAGAACCAGGCTATGCTTTGTCACTTTATCATGAAACAATTTGAAAGGAAAGGACACTCTCCTAACGAAATTCTCCTCCAGAGCTTGTTGTTCTTGTTGCACTCAGCAACTGATCTATTTTGTCCACCAGAGAATGTGATCGATATCATATTGAAATCCGCCGAAGATCTCAATGGAAAACTTGTATGTCTTTACAATTCCGTTAATGCAAGGAATAATAAATTGGATAGAGTAAAACTAC]
[+] EMBL AK103472 [GAGGAGGCCGGCTGCGCTGCGCTGCGCGATGGAACCGGAGAGGGAGGCATCGTCGGAGTGGGGAGATGGTGTCGGGGCGCTGGGTTTCCGGGTGAAGGCGTCTTCGCGCGAGCCGGCGGCGCAGAAGGCGGCCAATGTGCTGGAGCCGGACCTGCGTTCCCACTGGTCCACCGCCACCAACACCAAGGAGTGGATCCTGCTCGAGCTCAGCGAGCCGTGCCTCCTCTCCCACATCCGCATCTACAACAAGTCCGTCCTCGAGTGGGAGATCACTGCCGGCCTGCGCTACAACAAGCCAGATACCTTCGTCAAGGTTCGCCCGCGCTGCGAGGCTCCCAAGCGCGACATACTCTATCCTGCCAACCACACCCCTTGCCGCTACGTCCGCATCTCTTGTATGCGCGGCAACCCTATCGCCATCTTCTTCATCCAGCTCATTGGAATCCCTATACCTGGACTGGAACCTGACCTCCAGCCTCTAGTCAACTACCTATTGCCACATATCACTGCACACAAACAATCCTCTCAAAATATCCACCTCCAGTTACTCAAAGACATTGCAAGCAGGCTACCACCATTTCTGCCCCAGATTGAGGCTGACCTCGCTAGTGTCACAGACACTCCAGAGAGCAGTGTACACTTTTTGGCTCTGCTTGCTGGGCCATTTTATCCAATCCTCCAACTTACAAATGAAAGGGATTTTACTAAATCATTAATTAGCTCTGCTGATTCAGATGCTCTGAAAAGTAGTTTGGCTTCTACTCCAACGGTTTCTTCAAACTTTGAGACACAACCTAGGAGATCACGGAGTCCATCTTCTGTTCAGCCTGCTTGTTTTCTGGCATTTCGATCTGAAACAGCCGTACTGCTCTTAAGGAAAGCACACAGAGACAGAGCCCTTGGAATTGTTTGCCTGAAAGCATCAAAGGTCCTGCAAGAACTTCTGGAGCCCGATCCATTGTTAGATGATGCTTCTGACCAAGTACTTTGTACAGACTACTCTAGTTTGTTTGGAGATGAATTTAACTTATCGGAGAATTGCTTTGATGCCTCTATTCTGAACATTTTGGATATTGCTGCTGTTGAAGAAGGCATTCTTCATATACTATATGCAGCTTCATCACAGCCTCTGTTATGTTGCAAGCTTGCTGAGAAAGGTTCAGACATGTGGTCTGTCTTACCACTTGTTCAAGCTCTGCTTCCAGCACTTCGTCCTCCACTTAGCCCTGGTTCTACTGAACAGATTGATGGTTGTCTTAGCCAATGGAATCATCCAAATGTTCATAAAGCTCTCTCTCAGATTGCTACAATGTCAATGTCATCATCAGTTCTTCATCCTCTTCTCAGAGCCTGTGCTGGTTATCTTTCATCCTACCTGTCATCACATGCAAAAGCAGCCTGTGTTTTGCTTGACTTATGCAGGGGACCATTATCACCGTGGGTACCCATGATCACGGCAAAGGTAGACCTTGCCATTGAACTTCTGGAGGATCTCCTGGGTATTATCCAGGGAGTTGGTCAATCTCTTACTCGTTCTCGTGCAGCACTGAAGTATATTGCATTGGCCATATCTGGCCATATGGATGATGTTCTCACAGAATATAAAGACGTCAAACATAAGTTACTTTTCATTCTGGAGATGCTAGATCCTTTTATTGATCCTTCTGTAAGTGTTATGACAGATGCAATGGCATTTGGTGATGTGTCTGTTGTGCATTTGGAGAAGCAAGCAAGCGCTTGCAATATTTCGTTAAATATTATTCGTACAGCAGTGAAGAGGCCTGCTGTTCTCCCTTCTTTAGAACTTGAATGGCGTCGTGGTGCTGTTGCCACAAGTGTTATTCTCTCTACCTTGGATCCGCATATGCCACTCCCTCCTGACATAGACCTCTGCAAAAGTTCGATGCCTGAGATTGATCAAATATCTCTGATAGTTCCAAACTGTCCACCGCACTCCTGCAGTGCTGAAGATGCTGATGGGCGTGATACATCTGAAACAACTCCCAGGGAAGATATTCTTGAACAGTGCAATTCTTTATTTGCTCCAGAAGAATTAGAGCAATCTGAGTTGACAAAGACTTTGGAAGAAAAAAAGCATGAGAAAATAAGTACAGATTTGGACCAGAACTTCCCAGAGGACACAAAAAGTAATGGAAAATTACCAGCTGGCCTTTTTCAGTTAGATAATATTTTTGCTGCTGATTACTATGATGCACATGCTGATTATCTGCAGCTGGTGAACTATCAGGACTGTGAATTAAGAGCTCTAGAATTTCAGCGCTTAGCACTGAATCTATGCACACAACAAGAACCTACAGTTGAGGGGCATAATGCTGGAATAGATGCTTTTCTGTTAGCTGCTGAATGCTATGTTAATCCACTCTTTCTCTTGGATTTCCATTCTAATTCGGAGTCTTTGGATGAAATTGAACGTATTCATGCAGAATTGATCCAAGGAAATTGTTTCTCTGAGGCGAAACATCTGCGTGCTAAAGATATTGATCTCATGAAAATTTATAATTTGGAGAATAAACGAGATAAAGCGGTCCTGGATTTACTCATGCAAGCTGCAAGATATGATTTTGAATACCAGGGAAAGATACCTGATGGGAAACCTTTTCCAGATGATGTTGAAGATGGCAAGCAATATATAGAAATTTCACCAGAGGCTAGACACCTTGCTGATGCTGTAACTTTGGTCAGAAAGAACCAGGCTATGCTTTGTCACTTTATCATGAAACAATTTGAAAGGAAAGGACACTCTCCTAACGAAATTCTCCTCCAGAGCTTGTTGTTCTTGTTGCACTCAGCAACTGATCTATTTTGTCCACCAGAGAATGTGATCGATATCATATTGAAATCCGCCGAAGATCTCAATGGAAAACTTGTATGTCTTTACAATTCCGTTAATGCAAGGAATAATAAATTGGATAGAGTAAAACTAC]
consensusID : consensus_8676#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 994 fasta sequence
[TACTTATTGACTTCAAATAATTTTTCAGGATATTACATATGACATCATTCGGAACAATTTGTGGCCGAAACTGGAAAGTTACAGGTTGTACTGTAATCCGAGCCCTAGTGTATCTTCTGTGGTTCCTTTGATCATTCTGAAAACCAGAGGCTTTGGAAGATACTGTATCAACAGGAACTACCGGTGAATCAGCACAGGGTGGAGGAACCGTTTTTGGTCCTGAAACTCGGTCAAAACCATACAGCTGCGCAGGGTGGAGGAGCACTTGCAATCACAGCTGAGGAATCGATCTTTTCACAATCCCTTTTGTTCCGGTTGTGCAATCGGGACACACACTG-CTGGGGAATTATGATGTTGCCGGCGTCTCCGTCTCGGGTCCCAGCAGTGGAGCACTGACGTTTCCACAGGGGTTGCACAGCCAGGGCCCCAGGGCTCAAGCCATGTCAGACACTTTTGCCGGCCTCTCCTCTGGCGCCGCCTTGACCTCGTCGCTGCAAACGAAGAACATGTAGAATCCTGCAAGAATTGTGAAGACGGACATAGCCCACACGACAACGGCGACTGGGAAAGGCATAAGCGCAGCTACTCTGTAGGTGAACAAGATTGTGAGCACCGTGGAAAGGACCCAAACACCGGCTTTGACATGGGATCTGCGGGGGGAGCTGCGAGGCAAGCTCTCGAACAAGCGGAGCGCGCAGAAGAGCGAGATGAGCATGAGGAAGGCGGCCAACACAAACGCGACTGACCAGGGGTCACGCCGCGAATGGTAGATAGCTGCGCCGCAGTTGATGGCAAGGATGGTGAAGGCGAAGGCCGATGTACACGACGAGCTGTCTTTGCTAGGATCCGAGGAGCATGATGGTTCGTCGGTGCATTTGCCGGAACCATCTAGTGCCTCGTAGTCAGAGATCGGTGGAGCTTCCCTGCGGAGACTCGACATCGTCGACGCTTCTGCCTTCGGCGTAGGAAGGGATATCTAGCTTACTGATGTTTG]
[-] EMBL AK059855 [TACTTATTGACTTCAAATAATTTTTCAGGATATTACATATGACATCATTCGGAACAATTTGTGGCCGAAACTGGAAAGTTACAGGTTGTACTGTAATCCGAGCCCTAGTGTATCTTCTGTGGTTCCTTTGATCATTCTGAAAACCAGAGGCTTTGGAAGATACTGTATCAACAGGAACTACCGGTGAATCAGCACAGGGTGGAGGAACCGTTTTTGGTCCTGAAACTCGGTCAAAACCATACAGCTGCGCAGGGTGGAGGAGCACTTGCAATCACAGCTGAGGAATCGATCTTTTCACAATCCCTTTTGTTCCGGTTGTGCAATCGGGACACACACTG CTGGGGAATTATGATGTTGCCGGCGTCTCCGTCTCGGGTCCCAGCAGTGGAGCACTGACGTTTCCACAGGGGTTGCACAGCCAGGGCCCCAGGGCTCAAGCCATGTCAGACACTTTTGCCGGCCTCTCCTCTGGCGCCGCCTTGACCTCGTCGCTGCAAACGAAGAACATGTAGAATCCTGCAAGAATTGTGAAGACGGACATAGCCCACACGACAACGGCGACTGGGAAAGGCATAAGCGCAGCTACTCTGTAGGTGAACAAGATTGTGAGCACCGTGGAAAGGACCCAAACACCGGCTTTGACATGGGATCTGCGGGGGGAGCTGCGAGGCAAGCTCTCGAACAAGCGGAGCGCGCAGAAGAGCGAGATGAGCATGAGGAAGGCGGCCAACACAAACGCGACTGACCAGGGGTCACGCCGCGAATGGTAGATAGCTGCGCCGCAGTTGATGGCAAGGATGGTGAAGGCGAAGGCCGATGTACACGACGAGCTGTCTTTGCTAGGATCCGAGGAGCATGATGGTTCGTCGGTGCATTTGCCGGAACCATCTAGTGCCTCGTAGTCAGAGATCGGTGGAGCTTCCCTGCGGAGACTCGACATCGTCGACGCTTCTGCCTTCGGCGTAGGAAGGGATATCTAGCTTACTGATGTTTG]
[+] EMBL BF889457 [ TCCGAGCCCTA TGTATCTTCTGTGGTTCCTTTGATCATTCTGAAAACCAGAGGCTTTGGAAGATACTGGATCAACAGGAACTACCGGTGAATCAACACACGGTGGAGGAACCGTTTTTGGTCCTGAAACTCGGTCAAAACCATACAGCTGCGCAGGGTGGAGGAGCACTTGCAATCACAGCTGAGGAATCGATCTTTTCACAATCCCTTTTGTTCCGGTTGTGCAATCGGGACACACACTGTGTGGGGAATTATGATGTTGCCGGCGTCTCCGTCTCGGGTCCCAGCAGTGGAGCA ]
consensusID : consensus_8676#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 819 fasta sequence
[TAGATATCCCTTCCTACGCCGAAGGCAGAAGCGTCGACGATGTCGAGTCTCCGCAGGGAAGCTGCACCGATCTCTGACTACGAGGCACTAGATGGTTCCGGCAAATGCACCGACGAACCATCATGCTCCTCGGATCCTAGCAAAGACAGCTCGTCGTGTACATCGGCCTTCGCCTTCACCATCCTTGCCATCAACTGCGGCGCAGCTATCTACCATTCGCGGCGTGACCCCTGGTCAGTCGCGTTTGTGTTGGCCGCCTTCCTCATGCTCATCTCGCTCTTCTGCGCGCTCCGCTTGTTCGAGAGCTTGCCTCGCAGCTCCCCCCGCAGATCCCATGTCAAAGCCGGTGTTTGGGTCCTTCCACGGTGCTCACAATCTTGTCACCTACAGAGTAGCTGCGCTTATGCCTTTCCAGTCGCCGTTGCGTGTGGCCATGTCGTCTCACAATCTTGCAGATCTCATGTCTCGTTGCACGACAAGTCAGCGCCCCAAGAAAGCCGCAAAGTGCTGACTGGTGAGCCTNGCCTTGTTGGCACCCTGGGAAACGATGCTCACGTTGACCANACGAACGCGGACTCTTAATCCACATGGTGTCATCGCACCGACAAGGATGAAAAACTACCAATGGAGAAGGCCCCACCGCACTTTGGTACAATAGAAAAAAGTCTCCTGCGTACCGGTCTTGACAATTCAACCGTGTTAAAAGACAAAACAAGCGAAGAATGATTCTTCCCAGGGAGAGTTATGAATTACGACTTTGGGCCTGCTGNTNNTANNNTAAAATAAAAAAAAAGGAGAGTGCTTTGTCAGATTTTTTTA]
[+] EMBL AW155611 [TAGATATCCCTTCCTACGCCGAAGGCAGAAGCGTCGACGATGTCGAGTCTCCGCAGGGAAGCTGCACCGATCTCTGACTACGAGGCACTAGATGGTTCCGGCAAATGCACCGACGAACCATCATGCTCCTCGGATCCTAGCAAAGACAGCTCGTCGTGTACATCGGCCTTCGCCTTCACCATCCTTGCCATCAACTGCGGCGCAGCTATCTACCATTCGCGGCGTGACCCCTGGTCAGTCGCGTTTGTGTTGGCCGCCTTCCTCATGCTCATCTCGCTCTTCTGCGCGCTCCGCTTGTTCGAGAGCTTGCCTCGCAGCTCCCCCCGCAGATCCCATGTCAAAGCCGGTGTTTGGGTCCTTCCACGGTGCTCACAATCTTGTCACCTACAGAGTAGCTGCGCTTATGCCTTTCCAGTCGCCGTTGCGTGTGGCCATGTCGTCTCACAATCTTGCAGATCTCATGTCTCGTTGCACGACAAGTCAGCGCCCCAAGAAAGCCGCAAAGTGCTGACTGGTGAGCCTNGCCTTGTTGGCACCCTGGGAAACGATGCTCACGTTGACCANACGAACGCGGACTCTTAATCCACATGGTGTCATCGCACCGACAAGGATGAAAAACTACCAATGGAGAAGGCCCCACCGCACTTTGGTACAATAGAAAAAAGTCTCCTGCGTACCGGTCTTGACAATTCAACCGTGTTAAAAGACAAAACAAGCGAAGAATGATTCTTCCCAGGGAGAGTTATGAATTACGACTTTGGGCCTGCTGNTNNTANNNTAAAATAAAAAAAAAGGAGAGTGCTTTGTCAGATTTTTTTA]
consensusID : consensus_8676#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 752 fasta sequence
[TCTACCTCTGTGTGGGCAGCCGCAGGAGGAGGCCGGCTGGGCTGCGCTGCGCGATGGAACCGGAGAGGGAGGCATCGTCGGAGTGGGGAGATGGTGTCGGGGTGCTGGGTTTCCGGGTGAAGGCGTCTTCGTGCGAGCCGGCGGCGCAGAAGGCGGCCAATGTGCTGTAGCCAGACCTGCGCTCCCACTGGTCCACCGCCACCAACACCAAGGAGTGGATCCTGCTCGAGCTCAGCGTGCGTACTAGCGACTTGTTGTTTCTTCCCCCTCTCTAACTAGGAGTCTCCTTCTCTAGCCCTGAATGAATTGCTGAATTTGCTGCTGCAGGAGCCGTGCCTCCTCTCCCACATCCGCATCTACAACAAGTCCGTCCTCGAGTGGGAGATCACTGCCGGCCTGCGCTACAACAAGCCAGATACCTTCGTCAAGGTTCGCCCGCGCTGCGAGGCTCCCAAGCGCGACATACTCTATCCTGCCAACCACACCCCTTGCCGCTACGTCCGCATCTCTTGTATGCGCGGCAACCCTATCGCCATCTTCTTCATCCAGGTAGGAGTAACTACTAGTATAACTTTTACTCTTCCTCCGGATATATTCCGAGTAATAAGTCACTCTTCTTCTTCAGCTCATTGGAATCCCTATACCTGGACTGGAACCTGACCTCCAGCCTCTAGTCAACTACCTATTGCCACAAATTGTTCCGAATGATGTCATATGTAATATCCTGAAAAATTATTTGAAGTCAATAAGTA]
[+] EMBL AK062873 [TCTACCTCTGTGTGGGCAGCCGCAGGAGGAGGCCGGCTGGGCTGCGCTGCGCGATGGAACCGGAGAGGGAGGCATCGTCGGAGTGGGGAGATGGTGTCGGGGTGCTGGGTTTCCGGGTGAAGGCGTCTTCGTGCGAGCCGGCGGCGCAGAAGGCGGCCAATGTGCTGTAGCCAGACCTGCGCTCCCACTGGTCCACCGCCACCAACACCAAGGAGTGGATCCTGCTCGAGCTCAGCGTGCGTACTAGCGACTTGTTGTTTCTTCCCCCTCTCTAACTAGGAGTCTCCTTCTCTAGCCCTGAATGAATTGCTGAATTTGCTGCTGCAGGAGCCGTGCCTCCTCTCCCACATCCGCATCTACAACAAGTCCGTCCTCGAGTGGGAGATCACTGCCGGCCTGCGCTACAACAAGCCAGATACCTTCGTCAAGGTTCGCCCGCGCTGCGAGGCTCCCAAGCGCGACATACTCTATCCTGCCAACCACACCCCTTGCCGCTACGTCCGCATCTCTTGTATGCGCGGCAACCCTATCGCCATCTTCTTCATCCAGGTAGGAGTAACTACTAGTATAACTTTTACTCTTCCTCCGGATATATTCCGAGTAATAAGTCACTCTTCTTCTTCAGCTCATTGGAATCCCTATACCTGGACTGGAACCTGACCTCCAGCCTCTAGTCAACTACCTATTGCCACAAATTGTTCCGAATGATGTCATATGTAATATCCTGAAAAATTATTTGAAGTCAATAAGTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8676#0 -------------------------GAGGAGGCCGGCTGCGCTGCGCTGCGCGATGGAAC 35
consensus_8676#3 TCTACCTCTGTGTGGGCAGCCGCAGGAGGAGGCCGGCTGGGCTGCGCTGCGCGATGGAAC 60
consensus_8676#1 ------------TACTTATTGACTTCAAATAATTTTTCAGGATATTACATATGACATCAT 48
consensus_8676#2 -------------------------TAGATATCCCTTC---CTACGCCGAA-GGCAGAAG 31
* * * *
consensus_8676#0 CGGAGAGGGAGGCATCGTCGGAGTGGGGAGATGGTGTCGGGGCGCTGGGTTTCCGGGTGA 95
consensus_8676#3 CGGAGAGGGAGGCATCGTCGGAGTGGGGAGATGGTGTCGGGGTGCTGGGTTTCCGGGTGA 120
consensus_8676#1 TCG-GAACAATTTGTGGCCGAAACTGGAAAGTTACAG-GTTGTACTGTAATCCGAGCCCT 106
consensus_8676#2 CGTCGA-CGATGTCGAGTCTCCGCAGGGAAGCTGCACCGATCT-CTGACTACGAGGCACT 89
** * * * ** * * *** *
consensus_8676#0 AG---GCGTCTTCGCGCGAGCCGGCGGCGCAGAAGGCGGCCAATGTGCTGGAGCCGGACC 152
consensus_8676#3 AG---GCGTCTTCGTGCGAGCCGGCGGCGCAGAAGGCGGCCAATGTGCTGTAGCCAGACC 177
consensus_8676#1 AGT--GTATCTTC-TGTGGTTCCTTTGATCATTCTGAAAACCAGAGGCTTTGGAAGATAC 163
consensus_8676#2 AGATGGTTCCGGCAAATGCACCGACGAACCATCATGCTCCTCGGATCCTAGCAAAGACAG 149
** * * * * * ** * **
consensus_8676#0 TGCGTTCCCACTGGTCCACCGCC--ACCAACACCAAGGAGTGGATCCTGCTCGAGCTCAG 210
consensus_8676#3 TGCGCTCCCACTGGTCCACCGCC--ACCAACACCAAGGAGTGGATCCTGCTCGAGCTCAG 235
consensus_8676#1 TGTATCAACAG-GAACTACCGGTGAATCAGCACAGGGTGGAGGAACCGTTTTTGGTCCTG 222
consensus_8676#2 CTCGTCG-TGTACATCGGCCTTC--GCCTTCACCAT-CCTTGCCATCAACTGCGGCGCAG 205
* ** * *** * * * * * *
consensus_8676#0 CG---------------------------------------------------------- 212
consensus_8676#3 CGTGCGTACTAGCGACTTGTTGTTTCTTCCCCCTCTCTAACTAGGAGTCTCCTTCTCTAG 295
consensus_8676#1 AAACTCGGTCAAAACCATACAGCTGCGC-------------------------------- 250
consensus_8676#2 CTATC------------------------------------------------------- 210
consensus_8676#0 ---------------------------------AGCCGTGCCTCCTCTCCCACATCCGCA 239
consensus_8676#3 CCCTGAATGAATTGCTGAATTTGCTGCTGCAGGAGCCGTGCCTCCTCTCCCACATCCGCA 355
consensus_8676#1 -----AGGGTGGAGGAGCACTTGCAATCACAGCTGAGGAATCGATCTTTTCACAATCCCT 305
consensus_8676#2 --------------------------TACCATTCGCGGCGT-GACCCCTGGTCAGTCGCG 243
* * ** * *
consensus_8676#0 TCTACAACAAGTCCGTCCTCGAGTGGGAGATCACTGCCGGCCTGCGCTACAACAAGCCAG 299
consensus_8676#3 TCTACAACAAGTCCGTCCTCGAGTGGGAGATCACTGCCGGCCTGCGCTACAACAAGCCAG 415
consensus_8676#1 TTTGTTCCGGTTGTGCAATCGGGACACA---CACTGCTGG--GGAATTATGATGTTGCCG 360
consensus_8676#2 TTTGTGTTGGCCGCCTTCCTCATGCTCATCTCGCT-CTTCTGCGCGCTCCGCTTGTTCGA 302
* * * * ** * * * *
consensus_8676#0 ATACCTTCGTCAAGGTTCGCCCGCGCTGCGAGGCTCCCAAGCG-CGACATACTCTATCCT 358
consensus_8676#3 ATACCTTCGTCAAGGTTCGCCCGCGCTGCGAGGCTCCCAAGCG-CGACATACTCTATCCT 474
consensus_8676#1 GCGTCTCCGTCTCGG---GTCCCAGCAGTGGAGCACTGACGTTTCCACAGGGGTTGCACA 417
consensus_8676#2 GAGCTTGCCTCGCAGCTCCCCCCGCAGATCCCATGTCAAAGCCGGTGTTTGGGTCCTTCC 362
* * ** * ** * * *
consensus_8676#0 GCCAA--CCACACCCCTTGCCGCTACGTCCGCATCTCTTGTATGCGCGGCAACCCTATCG 416
consensus_8676#3 GCCAA--CCACACCCCTTGCCGCTACGTCCGCATCTCTTGTATGCGCGGCAACCCTATCG 532
consensus_8676#1 GCCAGGGCCCCAGGGCTCAA-GCCATGTCAGACACTTTTGCCGGCCTCTC--CTCTGGCG 474
consensus_8676#2 ACGGTGCTCACAATCTT----GTCACCTACAGAGTAGCTGCGCTTATGCCTTTCCAGTCG 418
* * ** * * * * ** * * **
consensus_8676#0 CCATCTT--CTTCATCCAGCTCATTGGAATCCCTATACCTGGACTGGAACCTGACCTCCA 474
consensus_8676#3 CCATCTT--CTTCATCCAG---GTAGGAGTAACTA---CTAG--TATAACTTTTACTCTT 582
consensus_8676#1 CCGCCTTGACCTCGTCGCTGCAAACGAAGAACATG----TAGAATCCTGCAAGAATTGTG 530
consensus_8676#2 CCGTTGCG-TGTGGCCATGTCGTCTCACAATCTTG----CAGATCTCATGTCTCGTTGCA 473
** * * * * *
consensus_8676#0 GCCTCTAGTCAACTACCTATTGCCACATATCACTGCACACAAACAATCCTCTCAAAATAT 534
consensus_8676#3 -CCTCCGGATATATTCCGAGTA--ATAAGTCACTCTTCTTCTTCAGCTCATT-GGAATCC 638
consensus_8676#1 -AAGACGGACATAGCCCACACGACAACGGCGACTGGGAAAGGCATAAGCGCAGCTACTCT 589
consensus_8676#2 --CGACAAGTCAGCGCCCCAAGAAAGCCGCAAAGTGCTGACTGGTGAGCCTN---GCCTT 528
** * * *
consensus_8676#0 CCACCTCCAGTTACTCAAAGACATTGCAAGCAGGCTACCACCATTTCTGCCCCAGATTGA 594
consensus_8676#3 CTATACCTGG--ACTGGA--ACCTGACCTCCAGCCTCTAGTCAACTAC-CTATTGCCACA 693
consensus_8676#1 GTAGGTGAACAAGATTGTGAGCACCGTGGAAAGGACCCAAACACCGGC-TTTGACATGGG 648
consensus_8676#2 GTTGGCACCCTGGGAAACGATGCTCACGTTGACCANACGAACGCGGACTCTTAATCCACA 588
* *
consensus_8676#0 GGCTGACCTCGCTAGTGTCACA------GACACTCCAGAGAGCAGTGTACACTTTTTGGC 648
consensus_8676#3 AATTGTTCCGAATGATGTCATAT---GTAATATCCTGAAAAATTATTTGAAGTCAATAAG 750
consensus_8676#1 ATCTGCGGGGGGAGCTGCGAGGC---A-AGCTCTCGAACAAGCGGAGCGCGCAGAAGAGC 704
consensus_8676#2 TGGTGTCATCGCACCGACAAGGATGAAAAACTACCAATGGAGAAGGCCCCACCGCACTTT 648
** * * *
consensus_8676#0 TCTGCTTGCTGGGCCATTTTATCCAATCCTCCAACTTACAAATGAAAGGGATTTTACTAA 708
consensus_8676#3 TA---------------------------------------------------------- 752
consensus_8676#1 GAGATGAGCATGAGGAAGGCGGCCAA--CACAAACGCGACTGACCAGGGGTCACGCCGCG 762
consensus_8676#2 GGTAC-AATAGAAAAAAGTCTCCTGCGTACCGGTCTTGACAATTCAACCGTGTTA----A 703
consensus_8676#0 ATCATTAATTAGCTCTGCTGATTCAGATGCTCTGAAAAGTAGTTTGGCTTCTACTCCAAC 768
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 AATGGTAGATAGCTGCGCCGCAGTTGATGGCAAGGATGGTGAAGGCGAAGGCCGATGTAC 822
consensus_8676#2 AAGACAAAACAAGCGAAGAATGATTCTTCCCAGGGAGAGTTATGAATTACGACTTTGGGC 763
consensus_8676#0 GGTTTCTTCAAACTTTGAGACACAACCTAGGAGATCACGGAGTCCATCTTCTGTTCAGCC 828
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ACGACGAGCTGTCTTTG--CTAGGATCCGAGGAGCATGATGGTTCGTCGGTGCATTTGCC 880
consensus_8676#2 CTGCTGNTNNTANNNTAAAATAAAA---AAAAAGGAGAGTGCTTTGTCAGATTTTTTTA- 819
consensus_8676#0 TGCTTGTTTTCTGGCATTTCGATCTGAAACAGCCGTACTGCTCTTAAGGAAAGCACACAG 888
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 GGAACCATCTAGTGCCTCGTAGTCAGAGATCGGTGGAGCTTCCCTGCGGAGACTCGACAT 940
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 AGACAGAGCCCTTGGAATTGTTTGCCTGAAAGCATCAAAGGTCCTGCAAGAACTTCTGGA 948
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 CGTCGACGCTTCTGCCTTCGGC-GTAGGAAGGGATATCTAGCTTACTGATGTTTG----- 994
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 GCCCGATCCATTGTTAGATGATGCTTCTGACCAAGTACTTTGTACAGACTACTCTAGTTT 1008
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 GTTTGGAGATGAATTTAACTTATCGGAGAATTGCTTTGATGCCTCTATTCTGAACATTTT 1068
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 GGATATTGCTGCTGTTGAAGAAGGCATTCTTCATATACTATATGCAGCTTCATCACAGCC 1128
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 TCTGTTATGTTGCAAGCTTGCTGAGAAAGGTTCAGACATGTGGTCTGTCTTACCACTTGT 1188
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 TCAAGCTCTGCTTCCAGCACTTCGTCCTCCACTTAGCCCTGGTTCTACTGAACAGATTGA 1248
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 TGGTTGTCTTAGCCAATGGAATCATCCAAATGTTCATAAAGCTCTCTCTCAGATTGCTAC 1308
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 AATGTCAATGTCATCATCAGTTCTTCATCCTCTTCTCAGAGCCTGTGCTGGTTATCTTTC 1368
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 ATCCTACCTGTCATCACATGCAAAAGCAGCCTGTGTTTTGCTTGACTTATGCAGGGGACC 1428
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 ATTATCACCGTGGGTACCCATGATCACGGCAAAGGTAGACCTTGCCATTGAACTTCTGGA 1488
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 GGATCTCCTGGGTATTATCCAGGGAGTTGGTCAATCTCTTACTCGTTCTCGTGCAGCACT 1548
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 GAAGTATATTGCATTGGCCATATCTGGCCATATGGATGATGTTCTCACAGAATATAAAGA 1608
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 CGTCAAACATAAGTTACTTTTCATTCTGGAGATGCTAGATCCTTTTATTGATCCTTCTGT 1668
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 AAGTGTTATGACAGATGCAATGGCATTTGGTGATGTGTCTGTTGTGCATTTGGAGAAGCA 1728
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 AGCAAGCGCTTGCAATATTTCGTTAAATATTATTCGTACAGCAGTGAAGAGGCCTGCTGT 1788
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 TCTCCCTTCTTTAGAACTTGAATGGCGTCGTGGTGCTGTTGCCACAAGTGTTATTCTCTC 1848
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 TACCTTGGATCCGCATATGCCACTCCCTCCTGACATAGACCTCTGCAAAAGTTCGATGCC 1908
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 TGAGATTGATCAAATATCTCTGATAGTTCCAAACTGTCCACCGCACTCCTGCAGTGCTGA 1968
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 AGATGCTGATGGGCGTGATACATCTGAAACAACTCCCAGGGAAGATATTCTTGAACAGTG 2028
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 CAATTCTTTATTTGCTCCAGAAGAATTAGAGCAATCTGAGTTGACAAAGACTTTGGAAGA 2088
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 AAAAAAGCATGAGAAAATAAGTACAGATTTGGACCAGAACTTCCCAGAGGACACAAAAAG 2148
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 TAATGGAAAATTACCAGCTGGCCTTTTTCAGTTAGATAATATTTTTGCTGCTGATTACTA 2208
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 TGATGCACATGCTGATTATCTGCAGCTGGTGAACTATCAGGACTGTGAATTAAGAGCTCT 2268
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 AGAATTTCAGCGCTTAGCACTGAATCTATGCACACAACAAGAACCTACAGTTGAGGGGCA 2328
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 TAATGCTGGAATAGATGCTTTTCTGTTAGCTGCTGAATGCTATGTTAATCCACTCTTTCT 2388
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 CTTGGATTTCCATTCTAATTCGGAGTCTTTGGATGAAATTGAACGTATTCATGCAGAATT 2448
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 GATCCAAGGAAATTGTTTCTCTGAGGCGAAACATCTGCGTGCTAAAGATATTGATCTCAT 2508
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 GAAAATTTATAATTTGGAGAATAAACGAGATAAAGCGGTCCTGGATTTACTCATGCAAGC 2568
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 TGCAAGATATGATTTTGAATACCAGGGAAAGATACCTGATGGGAAACCTTTTCCAGATGA 2628
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 TGTTGAAGATGGCAAGCAATATATAGAAATTTCACCAGAGGCTAGACACCTTGCTGATGC 2688
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 TGTAACTTTGGTCAGAAAGAACCAGGCTATGCTTTGTCACTTTATCATGAAACAATTTGA 2748
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 AAGGAAAGGACACTCTCCTAACGAAATTCTCCTCCAGAGCTTGTTGTTCTTGTTGCACTC 2808
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 AGCAACTGATCTATTTTGTCCACCAGAGAATGTGATCGATATCATATTGAAATCCGCCGA 2868
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 AGATCTCAATGGAAAACTTGTATGTCTTTACAATTCCGTTAATGCAAGGAATAATAAATT 2928
consensus_8676#3 ------------------------------------------------------------
consensus_8676#1 ------------------------------------------------------------
consensus_8676#2 ------------------------------------------------------------
consensus_8676#0 GGATAGAGTAAAACTAC 2945
consensus_8676#3 -----------------
consensus_8676#1 -----------------
consensus_8676#2 -----------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||