These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8684#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2642 fasta sequence [TGCAGGAATGGCTGCACGACTGTGCACGTATTACCAGAAGACTTCACCTTCTGACCAAACAGCTACATCCCTGCGAAGCAACAGTGATGGACTGGGTACAATGCTTGCTATTGATCCCGCTGACAAATCTCCTTTTCTGGGGAACATTCGTTCTGGCTCCCACCAATCATGTCTTGAGACAAATATGTACAGAGCACCTGTATTTCCTCATAAGGTTGCGACGACAGATTATCTTTTAGTTCGTTCACCCAAAGGGATGCTTTCTCTTCGTCGCATTGACAAGTTGTATGCTGTTGGCCAACAGGAACCTCATATGGAAGTATTTTCACCTGGGACAAAAAATATGCAGAATTATATTCTGAATCGGATTCTTGTGTATGTATATCGTGAGTTCCGTGCTAGGGAGAAGCCTGGTATTATTCCTCAGATTCGAGCTGATGAATTACCTATTCAGCCTCCTATAACAGAGGCTATTGTGAGGAAACGGTTAAAGCATTGCGCGGATTTAAGGAAAGGACCAAAGGGACATTTGTTCTATATTCAGAGACCTGATTTTCGGATTCCATCGGAGGAAGAACTGAGAAGATTATTGACACCTGAAATGTCTGCTGTTATGAGAGTATGCAAGCTGGCCAGTATCGTCTCAAGCACTTAGGAATTGAGAAGCTTACTCAGCCTGTGGGACTTGCATCTGCCATGAATCAGCTTCCTGATGAAGCTATTGAGCTTGCTGCTGCAGCTCATATTGAGAGGGAATTGCAAATCACTAGCTGGAATCTTACCAGCAATTTTGTTGCTTGTACAAACCAGGACAAGGAAAATATAGAGAGATTAGAAATTACTGGTGTTGGTGATCCATCTGGCCGTGGGCTAGGATTTAGCTATGTACGAGTAACTCCAAAAGCACCTGTATCCAATTCAACACATAAGAAGAAGTCAGCTGCTGCAAAAGGCACCACTGTGACTGGAACAGATGCTGATCTCCGCAGGTTGAGCATGGATGCAGCTCGAGAGTTGCTACTCAAATTTGGCGTTCCAGAAGAGCAAATTGACAAGTTAACAAGGTGGCATCGGATCGCGATGGTGAGGAAGCTTTCAAGTGAACAAGCTGCATCGGGTGTTACAATGGATGAAATTCCAGTTAGTAAGTTTGCACGGGGACAAAGGATGTCTTTTCTGCAGCTTCAGCAGCAAACTAAAGAGAAATGTCAGGAAATTTGGGACAGACAAATTCAGTCACTTTCAGCTATGGACGGCAATGAAAATGGCAGTGACACAGAAGCTAACAGTGATCTTGACTCATTTGCTGGGGATCTTGAAAATTTGCTAGACGCAGAAGAATTTGATGATGAAGATGTTGGTAATACAGACATAAGAAGCGATAAAATGGATGGAATGAGAGGGCTTAAAATGAGAAGGTGTCATACTCAATCCCAAATTAATGAGGAAATTCAAGATGATGTAGCAGAGGCTGCTCTAGTAGAAAAACTGCTTGAAGAGAGTGATAGTGATATGAAGAGGAAGAAGCAGCCTGTGGAAACTACAAATTATAGCACTCCTATGTATAATCAGGGCAATAAAATGAAGCAGGGTAAGGCTGGCCAAATGATTAAATCGTCTGTATATGCCGGTGCATTAACCCCAAAAGAGAGCATACCAAGAGAAGCCAAGGAGGTTGAAAATTTTGCTGAAGGAAGTTTACCCTCAAAACTAAGAACAAAGACAGGATTTGATGCAAATGATGATATTATTCTAGTAAAAAGGAAAAATATCCCAGGAAAGGATGGGTTCAAGGAAAAGAGACAGGGTGCAAGGGGAGACACTCTTGTATGTGGAGCTTGTGGTCAGCTCGGGCACATGCGGACCAACAAACTGTGCCCCAAGTACGGGGAGGACCCTGAAACATCCGAAATGGATGTCAATTCCATCAGGTCTCATCCTCCTGATATTGTGAGTAATGCTCAAATAAAAACATCAAACAAGAGGTTGGTAGCAAAAGTTTCATCTGAAGCTTTTGAAACTGAAGGACCTGAAAGTATTGAAAAGGCTAAACCTGTCCCTGTAAAATTCAAATGTGGAGCACCTGAGAAGTCATTGGATAGGAACATGTCAATCTCAGCTTCTTTGGTTTCTGATAAACGTATGATGGATGCTACAGATTCGAAATCAACTGGAAAGGTTAATAAGATTAAAATATCTAACAAGATAAAATATGATGATTATCCTCCTGATACTCCTAAGCCATCTGTTGTAATAAGGCCTCCTGCTGAAGTGGAGAAGGATCTACCTCGTAAGAAAATTATTATCAAGCAGCCCAAGGTGCTTGGAGATCAGCAAAGACCTACTGAACTTAGGAGTGGTCAGGAGCCCAGAAAGACAAGGAAAATTGTTGAATTGTCAAGCTTTGAGAAGAGAGACAGAGAGGATGATAATGGTTTTTCTGGACAACCTATTCAGATCAATTCCTCACATGATAGGGGGT-GGGGTCTGGTGGG-AAAAAGAAGCAAAGGAATAATGGAAAGTAGTGAATCCTGGAGAGCTTTTGAGGAGCAACGAGAGAGACAAGAACAGAGACTAATTGAAGCTAGGATATATGATGCAAGGAGAGAGGATGA-GCTCCANAAGGCAAAGAAAAAAAAAAA] [+] EMBL AK064421 [TGCAGGAATGGCTGCACGACTGTGCACGTATTACCAGAAGACTTCACCTTCTGACCAAACAGCTACATCCCTGCGAAGCAACAGTGATGGACTGGGTACAATGCTTGCTATTGATCCCGCTGACAAATCTCCTTTTCTGGGGAACATTCGTTCTGGCTCCCACCAATCATGTCTTGAGACAAATATGTACAGAGCACCTGTATTTCCTCATAAGGTTGCGACGACAGATTATCTTTTAGTTCGTTCACCCAAAGGGATGCTTTCTCTTCGTCGCATTGACAAGTTGTATGCTGTTGGCCAACAGGAACCTCATATGGAAGTATTTTCACCTGGGACAAAAAATATGCAGAATTATATTCTGAATCGGATTCTTGTGTATGTATATCGTGAGTTCCGTGCTAGGGAGAAGCCTGGTATTATTCCTCAGATTCGAGCTGATGAATTACCTATTCAGCCTCCTATAACAGAGGCTATTGTGAGGAAACGGTTAAAGCATTGCGCGGATTTAAGGAAAGGACCAAAGGGACATTTGTTCTATATTCAGAGACCTGATTTTCGGATTCCATCGGAGGAAGAACTGAGAAGATTATTGACACCTGAAATGTCTGCTGTTATGAGAGTATGCAAGCTGGCCAGTATCGTCTCAAGCACTTAGGAATTGAGAAGCTTACTCAGCCTGTGGGACTTGCATCTGCCATGAATCAGCTTCCTGATGAAGCTATTGAGCTTGCTGCTGCAGCTCATATTGAGAGGGAATTGCAAATCACTAGCTGGAATCTTACCAGCAATTTTGTTGCTTGTACAAACCAGGACAAGGAAAATATAGAGAGATTAGAAATTACTGGTGTTGGTGATCCATCTGGCCGTGGGCTAGGATTTAGCTATGTACGAGTAACTCCAAAAGCACCTGTATCCAATTCAACACATAAGAAGAAGTCAGCTGCTGCAAAAGGCACCACTGTGACTGGAACAGATGCTGATCTCCGCAGGTTGAGCATGGATGCAGCTCGAGAGTTGCTACTCAAATTTGGCGTTCCAGAAGAGCAAATTGACAAGTTAACAAGGTGGCATCGGATCGCGATGGTGAGGAAGCTTTCAAGTGAACAAGCTGCATCGGGTGTTACAATGGATGAAATTCCAGTTAGTAAGTTTGCACGGGGACAAAGGATGTCTTTTCTGCAGCTTCAGCAGCAAACTAAAGAGAAATGTCAGGAAATTTGGGACAGACAAATTCAGTCACTTTCAGCTATGGACGGCAATGAAAATGGCAGTGACACAGAAGCTAACAGTGATCTTGACTCATTTGCTGGGGATCTTGAAAATTTGCTAGACGCAGAAGAATTTGATGATGAAGATGTTGGTAATACAGACATAAGAAGCGATAAAATGGATGGAATGAGAGGGCTTAAAATGAGAAGGTGTCATACTCAATCCCAAATTAATGAGGAAATTCAAGATGATGTAGCAGAGGCTGCTCTAGTAGAAAAACTGCTTGAAGAGAGTGATAGTGATATGAAGAGGAAGAAGCAGCCTGTGGAAACTACAAATTATAGCACTCCTATGTATAATCAGGGCAATAAAATGAAGCAGGGTAAGGCTGGCCAAATGATTAAATCGTCTGTATATGCCGGTGCATTAACCCCAAAAGAGAGCATACCAAGAGAAGCCAAGGAGGTTGAAAATTTTGCTGAAGGAAGTTTACCCTCAAAACTAAGAACAAAGACAGGATTTGATGCAAATGATGATATTATTCTAGTAAAAAGGAAAAATATCCCAGGAAAGGATGGGTTCAAGGAAAAGAGACAGGGTGCAAGGGGAGACACTCTTGTATGTGGAGCTTGTGGTCAGCTCGGGCACATGCGGACCAACAAACTGTGCCCCAAGTACGGGGAGGACCCTGAAACATCCGAAATGGATGTCAATTCCATCAGGTCTCATCCTCCTGATATTGTGAGTAATGCTCAAATAAAAACATCAAACAAGAGGTTGGTAGCAAAAGTTTCGTCTGAAGCTTTTGAAACTGAAGGACCTGAAAGTATTGAAAAGGCTAAACCTGTCCCTGTAAAATTCAAATGTGGAGCACCTGAGAAGTCATTGGATAGGAACATGTCAATCTCAGCTTCTTTGGTTTCTGATAAACGTATGATGGATGCTACAGATTCGAAATCAACTGGAAAGGTTAATAAGATTAAAATATCTAACAAGATAAAATATGATGATTATCCTCCTGATACTCCTAAGCCATCTGTTGTAATAAGGCCTCCTGCTGAAGTGGAGAAGGATCTACCTCGTAAGAAAATTATTATCAAGCAGCCCAAGGTGCTTGGAGATCAGCAAAGACCTACTGAACTTAGGAGTGGTCAGGAGCCCAGAAAGACAAGGAAAATTGTTGAATTGTCAAGCTTTGAGAAGAGAGACAGAGAGGATGATAATGGTTTTTCTGGACAACCTATTCAGATCAATTCCTCACATGATAGGGGGT GGGGTCTGGTGGG AAAAAGAAGCAAAGGAATAATGGAAAGTAGTGAATCCTGGAGAGCTTTTGAGGAGCAACGGGAGAGACAAGAACAGAGACTAATTGAAGCTAGGATATATGATGCAAGGAGAGAGGATGA GCTCCA ] [+] EMBL CB629947 [ GGCTTAAAATGATAAGGTGTCATACTCAAGCCCAAATTAATGAGGAAATTCAAGATGATGTAGCAGAGGCTGCTCTAGTAGAAAAACTGCTTGAAGAGAGTGATAGTGATATGAAGAGGAAGAAGCAGCCTGTGGAAACTACAAATTATAGCACTCCTATGTATAATCAGGGCAATAAAATGAAGCAGGGTAAGGCTGGCCAAATGATTAAATCGTCTGCATATGCCGGTGCATTAACCCCAAAAGAGAGCACACCAAGAGAAGCCAAGGAGGTTGAAAATTTTGCTGAAGGAAGTTTACCCTCAAAACTAAGAACAAAGACAGGATTTGATGCAAATGATGATATTATTCTAGTAAAAAGGAAAAATATCCCAGGAAAGGATGGGTTCAAGGAAAAGAGACAGGGTGCAAGGGGAGACACTCTTGTATGTGGAGCTTGTGGTCAGCTCGGGCACATGCGGACCAACAAACTGTGCCCCAAGTACGGGGAGGACCCTGAAACATCCGAAATGGATGTCAATTCCATCAGGTCTCATCCTCCTGATATTGTGAGTAATGCTCAAATAAAAACATCAAACAAGAGGTTGGTAGCAAAAGTTTCATCTGAAGCTTTTGAAACTGAAGGACCTGAAAGTATTGAAAAGGCTAAACCTGTCCCTGTAAAATTCAAATGTGGAGCACCTGAGAAGTCATTGGATAGGAACATGTCAATCTCAGCTTCTTTGGTTTCTGATAAACGTATGATGGATGCTACAGATTCGAAATCAACTGGAAAGGTCTATAAGATTAAAATATCTAACCAGATAAAAT ] [+] EMBL CA764919 [ TTGTATGTGGAGCTTGTGGTCAGCTCGGGCACATGCGGACCAACAAACTGTGCCCCAAGTACGGGGAGGACCCTGAAACATCCGAAATAGATGTCAATTCCATCAGGTCTCATCCTCCTGATATTGTGAGTAATGCTCAAATAAAAACATCAAACAAGAGGTTGGTAGCAAAAGTTTCATCTGAAGCTTTTGAAACTGAAGGACCTGAAAGTATTGAAAAGGCTAAACCTGTCCCTGTAAAATTCAAATGTGGAGCACCTGAGAAGTCATTGGATAGGAACATGTCAATCTCAGCTTCTTTGGTTTCTGATAAACGTATGATGGATGCTACAGATTCGAAATCAACTGGAAAGGTTAATAAGATTAAAATATCTAACAAGATAAAATATGATGATTATCCTCCTGATACTCCTAAGCCATCTGTTGTAATAAGGCCTCCTGCTGAAGTGGAGAAGGATCTACCTCGTAAGAAAATTATTATCAAGCAGCCCAAGGTGCTTGGAGATCAGCAAAGACCTACTGAACTTAGGAGTGGTCAGGAGCCCAGAAAGACAAGGAAAATTGTTGAATTGTCAAGCTTTGAGAAGAGAGACAGAGAGGATGATAATGGTTTTTCTGGACAACCTATTCAGATCAATTCCTCACATGATAGGGGGTGGGGGTCTGGTGGGAAAAAAGAAGCAAAGG ATAATGGNAAGTAGTGAATCCTGGAGAGCTTTTGGNGGGCCACGAGAGAGACAAGAACAGGGACTAATTGAAGCTAGGATATATGATGCAAGGANAAAGGATGANCCTCCAN ] [+] EMBL CB096485 [ TTGTATGTGGAGCTTGTGGTCNGCTCGGGCACATGCGGACCAACAAACTGTGCCCCAAGTACGGGGAGGACCCTGAAACATCCGAAATGGATGTCAATTCCATCAGGTCTCATCCTCCTGATATTGTGAGTAATGCTCAAATAAAAACATCAAACAAGAGGTTGGTAGCAAAAGTTTCATCTGAAGCTTTTGAAACTGAAGGACCTGAAAGTATTGAAAAGGCTAAACCTGTCCCTGTAAAATTCAAATGTGGAGCACCTGAGAAGTCATTGGATAGGAACATGTCAATCTCAGCTTCTTTGGTTTCTGATAAACGTATGATGGATGCTACAGATTCGAAATCAACTGGAAAGGTTAATAAGATTATAATATCTAACAAGATAAAATATGATGATTATCCTCCTGATACTCCTAAGCCATCTGTTGTAATAAGGCCTCCTGCTGAAGTGGAGAAGGATCTACCTCGTAAGAAAATTATTATCAAGCAGCCCAAGGTGCTTGGAGATCAGCAAAGACCTACTGAACTTAGGAGTGGTCAGGAGCCCAGAAAGACAAGGAAAATTGNTGAATTGTCAAGCTTTGAGAAGAGAGACAGAGAGGATGATAATGGTTTTTCTGGACAACCTATTCAGATCAATTNCTCACATGATAGGGGGT GGGGTCTGGTGGG NAAAAGAAGCCAAGGNATAATGGGAAGTAGTGAATCCTGGAGAGCTTTTGGNGGGCCACGNGAGAGNC AGGACAGAGACTAATTGGAGCTAGGA NTNTGATGCAAGGAGAGAGGATGA GCTnc ] [-] EMBL CA762065 [ AGTTTCATCTGAAGCTTTTGAAACTGAAGGACCTGAAAGTATT AAAAGGCTAAACCTGTCCCTGTAAAATTCAAATGTGGAGCACCTGAGAAGTCATTGGATAGGAACATGTCAATCTCAGCTTCTTTGGTTTCTGATAAACGTCTGATGGATGCCACAGATTCGAAATCAACTGGAAAGGTTAATAAGATTAAAATATCTAACAAGATAAAATATGATGATTATCCTCCTGATACTCCTAAGCCATCTGTTGTAATAAGGCCTCCTGCTGAAGTGGAGAAGGATCTACCTCGTAAGAAAATTATTATCAAGCAGCCCAAGGTGCTTGGAGATCAGCAAAGACCTACTGAACTTAGGAGTGGTCAGGAGCCCAGAAAGCCAAGGAAAATTGTTGAATTGTCAAGCTTTGAGAAGAGAGACAGAGAGGATGATAATGGTTTTTCTGGACAACCTATTCAGATCAATTCCTCACATGATAGGGGGT GGGGTCTGGTGGG AAAAAGAAGCAAAGGAATAATGGAAAGTAGTGAATCCTGGAGAGCTTTTGAGGAGCAACGAGAGAGACAAGAACAGAGACTAATTGAAGCTAGGATATATGATGCAAGGAGAGAGGATGA GCTCCAGAAGGCAAAGAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||