cluster # 8705

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8705 cluster # 8705 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8705#0 length = 1830 sequences # 5
consensusID : consensus_8705#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1830
fasta sequence
                              [CGGTCTCCGATTCCGATCCCCTTTCGATCCCCCTTGGTCGATCTACTAGGGTTTCCGATCCACGAATCAACCCACCAGAGTCGCCCGGCCATGCCTTGGGTTTATCATCCGCAACTTGAATTGCTGGCCGTTCCGCAACAACCTGAATCGTGTCCCATGGCTGCGGCGGTTACGCAGCCTGAATCGCCGGCCATGGCTGGGGTTGATCGTCTCCGCTTGGACGGTGCCATGCCCCCCTCGTATCCCTCCTCCTGGTCTGTGCTGCCGCGGGAGGTCGTGGTTGTCGACGAGATCGACGACGGGGAGGAGCTACGCCGGTGGAAC-ATCCTGAGATGCGATCGCAGGGCCGGCTACGGCGTCTGC-GAGGCAGTGGTGGAGGGCGTGAAGCTCGGTGCGCGCATCGTCTCCGACCGGGGCTTCTCCGCCCTGTGCATCATCGTGAGCAAAGCCGCGCGGGCTGGGACGAGAGGCCAAGTCTGCGCCGCGGTGCTGGCTATCAAGAATCATGTCATCGTCCTCTCCGTCGCCTTTCCCAGAGGTGATTTGTTCCACTCCCTCAAGTGTGCGTGTTCATCCTTCTACCTGGTCTACGACGCCTCCGACGCGTCCATCACCATGATCCCCGACCTGCAATTCTCCTTTCACCACCACAAAGTGTCTTCTGCTGTCACCAAGGAACCTCTCCCAATCGCTTGTGGTGTTGCACATTACCTCGTCCTCCTAGGCCGTGCCATGACGATTAAGGGGATGGATCAGCACATAGAAGATCGTGTCTGCCTGAGTCCGCTGCAGCAGTCATCTTTGGCTCATCCATCGCCATCGTCCAGCACCAACTGCAGTCTGTGGATGACCAAGTCGGCCATCTTCCCCAAAGAGGTGGTGACGAGAGGCTTTTCTGCAAATAAGATGCTCTCGTTCGATGGCTTGGCTATGTGGGTTGACTTGCATCAAGGAATCCTCTTCTGCCAACACTACGACTTGTTCTCCAATTCCAATGACAGTGGCTCTGTGCCGTTCTACTTTGTTGATCTGCCACCGGGCTGTTGTAATGATGACATCACCACCCGCCCGCTTTCTGACTCCTATCCACCAGAGATGTACCGTTCTATCGTGTGTGTCGGAGACAGCATCAAGTTCGTCACCATTGAAGGCTACCTCCGCGACAGCACTGCCCCTATCGAGGATCGGATGGTGACTATGTGGAGCCTGAGACCCCAGGAATCTTGGTCGTGGAGGAAAGACCGTGACCTCAGCATTGGAGGCATATGCGCGCAGCTTTTCAAGAAGATTCCTATATGCGC-AACGATGCTGGA-GCCGATGCCGAATATGGCACCGCAGAGTCCTATCCTGAGC-ACGGAGGATGGCAGCCTCCATCTCCTTATCGTGAATGATAACAGCAATGAAATGCTCGAGAATCAGAATATTATGGTCACTGTTGACATGTCCAAGGGCTACGTAATCTCCGCTTGTTTGCTCCCTACTGACTTTGGCGATCAGCTGCCTGGGTTGTATGGTGTCATGCTGCCGCGTATGCTGGGCTCCAACTTCTTCCGGTTCTGATTGGCAAAAAAAAGAAGCACATGGAACGGCAATGAGAAAACACATGCAATTTATCTATATTATTAGATGTAATC-GGATATTTGTAGTTCTCTTCTTATCTTTCTCTAAGCACTATGTTAGTGGTGGAAACTTTATCTGCACTGCAAGCTATCTTAGCACTGATGATCGGCATGCAATCTTAGTAAAATTTCTTGAGATGAGAATGTGCCATGTTTGTAAAAGATGGACCTATTAAGAATCACCTTATGTGACCTCACCTTTCACCAAAAA]

[+] EMBL AK070906             [CGGTCTCCGATTCCGATCCCCTTTCGATCCCCCTTGGTCGATCTACTAGGGTTTCCGATCCACGAATCAACCCACCAGAGTCGCCCGGCCATGCCTTGGGTTTATCATCCGCAACTTGAATTGCTGGCCGTTCCGCAACAACCTGAATCGTGTCCCATGGCTGCGGCGGTTACGCAGCCTGAATCGCCGGCCATGGCTGGGGTTGATCGTCTCCGCTTGGACGGTGCCATGCCCCCCTCGTATCCCTCCTCCTGGTCTGTGCTGCCGCGGGAGGTCGTGGTTGTCGACGAGATCGACGACGGGGAGGAGCTACGCCGGTGGAAC ATCCTGAGATGCGATCGCAGGGCCGGCTACGGCGTCTGC GAGGCAGTGGTGGAGGGCGTGAAGCTCGGTGCGCGCATCGTCTCCGACCGGGGCTTCTCCGCCCTGTGCATCATCGTGAGCAAAGCCGCGCGGGCTGGGACGAGAGGCCAAGTCTGCGCCGCGGTGCTGGCTATCAAGAATCATGTCATCGTCCTCTCCGTCGCCTTTCCCAGAGGTGATTTGTTCCACTCCCTCAAGTGTGCGTGTTCATCCTTCTACCTGGTCTACGACGCCTCCGACGCGTCCATCACCATGATCCCCGACCTGCAATTCTCCTTTCACCACCACAAAGTGTCTTCTGCTGTCACCAAGGAACCTCTCCCAATCGCTTGTGGTGTTGCACATTACCTCGTCCTCCTAGGCCGTGCCATGACGATTAAGGGGATGGATCAGCACATAGAAGATCGTGTCTGCCTGAGTCCGCTGCAGCAGTCATCTTTGGCTCATCCATCGCCATCGTCCAGCACCAACTGCAGTCTGTGGATGACCAAGTCGGCCATCTTCCCCAAAGAGGTGGTGACGAGAGGCTTTTCTGCAAATAAGATGCTCTCGTTCGATGGCTTGGCTATGTGGGTTGACTTGCATCAAGGAATCCTCTTCTGCCAACACTACGACTTGTTCTCCAATTCCAATGACAGTGGCTCTGTGCCGTTCTACTTTGTTGATCTGCCACCGGGCTGTTGTAATGATGACATCACCACCCGCCCGCTTTCTGACTCCTATCCACCAGAGATGTACCGTTCTATCGTGTGTGTCGGAGACAGCATCAAGTTCGTCACCATTGAAGGCTACCTCCGCGACAGCACTGCCCCTATCGAGGATCGGATGGTGACTATGTGGAGCCTGAGACCCCAGGAATCTTGGTCGTGGAGGAAAGACCGTGACCTCAGCATTGGAGGCATATGCGCGCAGCTTTTCAAGAAGATTCCTATATGCGC AACGATGCTGGA GCCGATGCCGAATATGGCACCGCAGAGTCCTATCCTGAGC ACGGAGGATGGCAGCCTCCATCTCCTTATCGTGAATGATAACAGCAATGAAATGCTCGAGAATCAGAATATTATGGTCACTGTTGACATGTCCAAGGGCTACGTAATCTCCGCTTGTTTGCTCCCTACTGACTTTGGCGATCAGCTGCCTGGGTTGTATGGTGTCATGCTGCCGCGTATGCTGGGCTCCAACTTCTTCCGGTTCTGATTGGCAAAAAAAAGAAGCACATGGAACGGCAATGAGAAAACACATGCAATTTATCTATATTATTAGATGTAATC GGATATTTGTAGTTCTCTTCTTATCTTTCTCTAAGCACTATGTTAGTGGTGGAAACTTTATCTGCACTGCAAGCTATCTTAGCACTGATGATCGGCATGCAATCTTAGTAAAATT                                                                                 ]
[+] EMBL OSC354               [                  CCCTTTCGATCCCCCTTGGTCGATCTACTAGGGTTTCCGATCCACGAATCAACCCACCANAGTCGCCCGGCCATGCCTTGGGTTTATNATCCGCAACTTGAATTGCTGGCCGTTCCGCAACAACCTGAATCGTGTCCCATGGCTGCGGCGGTTACGCAGCCTGAATCGCCGGCCATGGCTGGGGTTNATCGTCTCCGCTTGGACGGTGCCATGCCCCCCTCGTATCCCTCCTCCTGGTCTGTGCTGCCGCGGGAGGTCGTGGTTGTCGACGAGATCGACGACGGGGAGGAGCTACGCCGGTGGAACAATCCTGAGATGCGATCGAAGGGCCGGCTACGGGGTCTNCAAAGGNAGTTGTTGAGGGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C72844               [                                                                                                                                                                                      ATCGCCGGCCATGGCTGGGGTTGATCGTCTCCGCTTGGACGGTGCCATGCCCCCCTCGTATCCCTCCTCCTGGTCTGTGCTGCCGCGGGAGGTCGTGGTTGTCGACGAGATCGACGACGGGGAGGAGCTACGCCGGTGGAAC ATCCTGAGATGCGATCGCAGGGCCGGCTAC GCGTCTGC GAGGCAGTGGTGGAGGGCGTGAAGCTCGGTGCGCGCATCGTCTCCGACCGGGGCTTCTCCGCCCTGTGCATCATCGTGAGCAAAGCCGCGCGGGCTGGGACGAGAGGCCAAGTCTGCGCGGCGGTGCTGGCTATCAAGAATCATGTCATCGTCCTCTCCGTCGCCTTTNCCAAAAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C73221               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACTTGTTCTCCAATTCCAATGACAGTGGCTCTGTGCCGTTNTACTTTGTTGATCTGCCACCGGGCTGTTGTAATGATGACATCACCACCCGCCCGCTTTCTGACTCCTATCCACCAGAGATGTACCGTTCTATCGTGTGTNTCGGAG CAGCATCAAGTTCGTNACCATTGAAGGCTACCTCCGCGACA NACTGCCCCTATCGAGGATCGGATGGTGACTATGTGGAGCCTGANACCCCAGGAATCTTGGTCGTGGAGGAAAGACCGTGACCTCAGCATTGGAGGCATATGCGCGCAG TTTTCAAGAAGATTCCTATATGCGCAAACGATGCTGGAGGCCGATGCCGAATATGGCACCGAGGAGTCCTATCCTGAGCAACGGNGGATTGCAGCCTCCATTTCCTTATCGTG ATNAT ACAG AATTAAAT NTCGGGAATCAG                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU172665             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTCGAGAATCAGAATATTATGGTCACTGTTGACATGTCCAAGGGCTACGTAATCTCCGCTTGTTTGCTCCCTACTGACTTTGGCGATCAGCTGCCTGGGTTGTATGGTGTCATGCTGCCGCGTATGCTGGGCTCCAACTTCTTCCGGTTCTGATTGGC AAAAAAAGAAGCACATGGAACGGCAATGAGAAAACACATGCAATTTATCTATATTATTAGATGTAATCGGGATATTTGTAGTTCTCTTCTTATCTTTCTCTAAGCACTATGTTAGTGGTGGAAACTTTATCTGCACTGCAAGCTATCTTAGCACTGATGATCGGCATGCAATCTTAGTAAAATTTCTTGAGATGAGAATGTGCCATGTTTGTAAAAGATGGACCTATTAAGAATCACCTTATGTGACCTCACCTTTCACCAAAAA]




>consensus_8705#0
CGGTCTCCGATTCCGATCCCCTTTCGATCCCCCTTGGTCGATCTACTAGGGTTTCCGATC
CACGAATCAACCCACCAGAGTCGCCCGGCCATGCCTTGGGTTTATCATCCGCAACTTGAA
TTGCTGGCCGTTCCGCAACAACCTGAATCGTGTCCCATGGCTGCGGCGGTTACGCAGCCT
GAATCGCCGGCCATGGCTGGGGTTGATCGTCTCCGCTTGGACGGTGCCATGCCCCCCTCG
TATCCCTCCTCCTGGTCTGTGCTGCCGCGGGAGGTCGTGGTTGTCGACGAGATCGACGAC
GGGGAGGAGCTACGCCGGTGGAACATCCTGAGATGCGATCGCAGGGCCGGCTACGGCGTC
TGCGAGGCAGTGGTGGAGGGCGTGAAGCTCGGTGCGCGCATCGTCTCCGACCGGGGCTTC
TCCGCCCTGTGCATCATCGTGAGCAAAGCCGCGCGGGCTGGGACGAGAGGCCAAGTCTGC
GCCGCGGTGCTGGCTATCAAGAATCATGTCATCGTCCTCTCCGTCGCCTTTCCCAGAGGT
GATTTGTTCCACTCCCTCAAGTGTGCGTGTTCATCCTTCTACCTGGTCTACGACGCCTCC
GACGCGTCCATCACCATGATCCCCGACCTGCAATTCTCCTTTCACCACCACAAAGTGTCT
TCTGCTGTCACCAAGGAACCTCTCCCAATCGCTTGTGGTGTTGCACATTACCTCGTCCTC
CTAGGCCGTGCCATGACGATTAAGGGGATGGATCAGCACATAGAAGATCGTGTCTGCCTG
AGTCCGCTGCAGCAGTCATCTTTGGCTCATCCATCGCCATCGTCCAGCACCAACTGCAGT
CTGTGGATGACCAAGTCGGCCATCTTCCCCAAAGAGGTGGTGACGAGAGGCTTTTCTGCA
AATAAGATGCTCTCGTTCGATGGCTTGGCTATGTGGGTTGACTTGCATCAAGGAATCCTC
TTCTGCCAACACTACGACTTGTTCTCCAATTCCAATGACAGTGGCTCTGTGCCGTTCTAC
TTTGTTGATCTGCCACCGGGCTGTTGTAATGATGACATCACCACCCGCCCGCTTTCTGAC
TCCTATCCACCAGAGATGTACCGTTCTATCGTGTGTGTCGGAGACAGCATCAAGTTCGTC
ACCATTGAAGGCTACCTCCGCGACAGCACTGCCCCTATCGAGGATCGGATGGTGACTATG
TGGAGCCTGAGACCCCAGGAATCTTGGTCGTGGAGGAAAGACCGTGACCTCAGCATTGGA
GGCATATGCGCGCAGCTTTTCAAGAAGATTCCTATATGCGCAACGATGCTGGAGCCGATG
CCGAATATGGCACCGCAGAGTCCTATCCTGAGCACGGAGGATGGCAGCCTCCATCTCCTT
ATCGTGAATGATAACAGCAATGAAATGCTCGAGAATCAGAATATTATGGTCACTGTTGAC
ATGTCCAAGGGCTACGTAATCTCCGCTTGTTTGCTCCCTACTGACTTTGGCGATCAGCTG
CCTGGGTTGTATGGTGTCATGCTGCCGCGTATGCTGGGCTCCAACTTCTTCCGGTTCTGA
TTGGCAAAAAAAAGAAGCACATGGAACGGCAATGAGAAAACACATGCAATTTATCTATAT
TATTAGATGTAATCGGATATTTGTAGTTCTCTTCTTATCTTTCTCTAAGCACTATGTTAG
TGGTGGAAACTTTATCTGCACTGCAAGCTATCTTAGCACTGATGATCGGCATGCAATCTT
AGTAAAATTTCTTGAGATGAGAATGTGCCATGTTTGTAAAAGATGGACCTATTAAGAATC
ACCTTATGTGACCTCACCTTTCACCAAAAA
clustalw multiple alignements is not computed in this case