These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8708#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2047 fasta sequence [TGAAAATGAAGGTATTTGGTATTGCGGACTTGGTTATAAGTGAATTGGATATTGAGATGCCTAGTTACCTGGGACTGCTTACACTACTACAAAACGATTGGCACACAAGAAAAAGATCCATGGAAACATGGAGAATGGAGATGTTCAGTTCATCTATTGTCCAAAGATCTCTGGTTTATCTTGTAGTGCATGGCTAAAAATAACATTTGAGATTCGGGGGAAATAATGGTGGAAGGAGTGCTTGGTAAGTTGGAAAATAGCTCAGGACACCACTTGTTTCTGGAATGTCCGTCTGTTTCTTCGGATTGTAGAAATTGAAGGGTGGAACTCCTTGCAGAGGATTAGATCATGCTCCAGGAGGCCTAACCTATATGATATGAATTGGATAAAGAGATGAACCAGGCTTTAGGAACATGTGAATTCTGCAAGACTGGCGAGCCCAAATGTGGGTTGCTGCATTGTTGATATTTTAACTACTTTATAAACCAGACAAGAGATCAGGATCATATGGTGCTGAGTTCACCTTCAATTACTGTGCTGTTTACTTGACAGAAATTATTTTCAGAGGCTTATTTCTGCAATGCATTTTTTTTCTGGTTTGACTCTTGAGGGCCTTTGCTGAAAGCAGTTCACCTTCAGGAGTTGCAGAACTCATGCATGATGCAAGTCCTACTTGCTGACTGTTACTCCTTGTGGCTTCTAATGTTCATGTAGAATGTTTGTCGCTCGCCTTTCAGGATATCACCCGCACTCAGGTTCCATGATACCTCCACGTGGCCGCGGAGTAGAAAGCAGCAATTTCAATGACGGTTCACGTTATGGATATGAGCTGGCAAGTAAAGGAGGTGAAAGGTTACAATATGTTTCTCCTCCCAATGGAAGAGGAAGACCACACAGGAGGGATGGTGGTGCTCCTGGAAAAGATTTCATCTTCATTAATGGAGAATATGTGCACAGGAATGACCCAAACTTGTCTCCAAGAGAAGGTGACTGGATATGTCAGAATCCCACTTGCGGAAATCTTAATTTTGCTCGGCGGTCTCACTGTAACAACTGCAACAAGGAACGCTATGCACCTGCCATGTACAAGTCCAGCTACAGTCCTGACAGACGCCAGTTCAACTCTCCACCACAAGGGCCACCGAGTAGGGTTATTGGTCCACCGAGTGGCCGTGATCTGCCAAGGGAGAAACAAAGGTATAGATCACCACCGCGTGGTTGGGGTATGGTCCGACCGGATGATCATAGGGACTATTCTACGCAGTTGTCCCAAGATCGTCCAGGACGAATGGCAGACCCTATGCACAGGGACAGGATCAACTTCGGGGATGAACTTCCACACCGACAGCGTGGGAAGTTTGACTGGGATGGCTATAATCACCGGGAGCATCCACGCGATGGACCATATCTTGACCGAAGAGAACCACGGTTGGGGTCTCCCAGGGGTAACTGGGGACAAGCTGTACGGGACAGAAGTCATTCACCCATGCGTAACAAGCCCATGAACAGGGGACTAGACTTACGGGAGAGAAGCCGTTCACCCTTTCGGGACAGGCCCTTGAACAAAGCCTCCATTGGAAGAGGTGGACCTGACCGAGACTATGTTCATCCATTTGACACCCATGGGCGACCTCATAATTTGGGCAATAGCCGTGGCCATGGTTACAGGCAGGAGGAT-GATCTGTTTCCTATTCGCAATCAAGGTGACCAGCGTGTCCTTTCCCGTCATCGGAATGGAATCCACTGAAATGTAATATCTTTCAGCTGGGTACAGATTCTTCGTGTTGATAGGCTATCTGGAAAAGCGAATCTAATAAAAATTATCTCGATGCTTGAGGACTCCTGAAGCTTTGTAATAATGTTTAATGTTTTGTACTGTGTAGTTACTTCCTTGGTTGGGTTGTTTCAGTGGAAGTTTCACCATTAGAAATGTCTTCATGAACTGAATTTAAAGGGCAATGCTAGGAATGAATATTGGAGTGGTTAAAGATGAACACAACCATACTGTGCTCTGTATGTTTTATTGTGTGAAATCTTGAGGTGTAAA] [+] EMBL AK105691 [TGAAAATGAAGGTATTTGGTATTGCGGACTTGGTTATAAGTGAATTGGATATTGAGATGCCTAGTTACCTGGGACTGCTTACACTACTACAAAACGATTGGCACACAAGAAAAAGATCCATGGAAACATGGAGAATGGAGATGTTCAGTTCATCTATTGTCCAAAGATCTCTGGTTTATCTTGTAGTGCATGGCTAAAAATAACATTTGAGATTCGGGGGAAATAATGGTGGAAGGAGTGCTTGGTAAGTTGGAAAATAGCTCAGGACACCACTTGTTTCTGGAATGTCCGTCTGTTTCTTCGGATTGTAGAAATTGAAGGGTGGAACTCCTTGCAGAGGATTAGATCATGCTCCAGGAGGCCTAACCTATATGATATGAATTGGATAAAGAGATGAACCAGGCTTTAGGAACATGTGAATTCTGCAAGACTGGCGAGCCCAAATGTGGGTTGCTGCATTGTTGATATTTTAACTACTTTATAAACCAGACAAGAGATCAGGATCATATGGTGCTGAGTTCACCTTCAATTACTGTGCTGTTTACTTGACAGAAATTATTTTCAGAGGCTTATTTCTGCAATGCATTTTTTTTCTGGTTTGACTCTTGAGGGCCTTTGCTGAAAGCAGTTCACCTTCAGGAGTTGCAGAACTCATGCATGATGCAAGTCCTACTTGCTGACTGTTACTCCTTGTGGCTTCTAATGTTCATGTAGAATGTTTGTCGCTCGCCTTTCAGGATATCACCCGCACTCAGGTTCCATGATACCTCCACGTGGCCGCGGAGTAGAAAGCAGCAATTTCAATGACGGTTCACGTTATGGATATGAGCTGGCAAGTAAAGGAGGTGAAAGGTTACAATATGTTTCTCCTCCCAATGGAAGAGGAAGACCACACAGGAGGGATGGTGGTGCTCCTGGAAAAGATTTCATCTTCATTAATGGAGAATATGTGCACAGGAATGACCCAAACTTGTCTCCAAGAGAAGGTGACTGGATATGTCAGAATCCCACTTGCGGAAATCTTAATTTTGCTCGGCGGTCTCACTGTAACAACTGCAACAAGGAACGCTATGCACCTGCCATGTACAAGTCCAGCTACAGTCCTGACAGACGCCAGTTCAACTCTCCACCACAAGGGCCACCGAGTAGGGTTATTGGTCCACCGAGTGGCCGTGATCTGCCAAGGGAGAAACAAAGGTATAGATCACCACCGCGTGGTTGGGGTATGGTCCGACCGGATGATCATAGGGACTATTCTACGCAGTTGTCCCAAGATCGTCCAGGACGAATGGCAGACCCTATGCACAGGGACAGGATCAACTTCGGGGATGAACTTCCACACCGACAGCGTGGGAAGTTTGACTGGGATGGCTATAATCACCGGGAGCATCCACGCGATGGACCATATCTTGACCGAAGAGAACCACGGTTGGGGTCTCCCAGGGGTAACTGGGGACAAGCTGTACGGGACAGAAGTCATTCACCCATGCGTAACAAGCCCATGAACAGGGGACTAGACTTACGGGAGAGAAGCCGTTCACCCTTTCGGGACAGGCCCTTGAACAAAGCCTCCATTGGAAGAGGTGGACCTGACCGAGACTATGTTCATCCATTTGACACCCATGGGCGACCTCATAATTTGGGCAATAGCCGTGGCCATGGTTACAGGCAGGAGGAT GATCTGTTTCCTATTCGCAATCAAGGTGACCAGCGTGTCCTTTCCCGTCATCGGAATGGAATCCACTGAAATGTAATATCTTTCAGCTGGGTACAGATTCTTCGTGTTGATAGGCTATCTGGAAAAGCGAATCTAATAAAAATTATCTCGATGCTTGAGGACTCCTGAAGCTTTGTAATAATGTTTAATGTTTTGTACTGTGTAGTTACTTCCTTGGTTGGGTTGTTTCAGTGGAAGTTTCACCATTAGAAATGTCTTCATGAACTGAATTTAAAGGGCAATGCTAGGAATGAATATTGGAGTG ] [-] EMBL CB654431 [ AAGATCGTCCAGGACGAATGGCAGACCCTATGCACAGGGACAGGATCAACTTCGGGGATGAACTTCCACACCGACAGCGTGGGAAGTTTGACTGGGATGGCTATAATCACCGGGAGCATCCACGCGATGGACCATATCTTGACCGAAGAGAACCACGGTTGGGGTCTCCCAGGGGTAACTGGGGACAAGCTGTACGGGACAGAAGTCATTCACCCATGCGTAACAAGCCCATGAACAGGGGACTAGACTTACGGGAGAGAAGCCGTTCACCCTTTCGGGACAGGCCCTTGAACAAAGCCTCCATTGGAAGAGGTGGACCTGACCGAGACTATGTTCATCCATTTGACACCCATGGGCGACCTCATAATTTGGGCAATAGCCGTGGCCATGGTTACAGGCAGGAGGAT GATCTGTTTCCTATTCGCAATCAAGGTGACCAGCGTGTCCTTTCCCGTCATCGGAATGGAATCCACTGAAATGTAATATCTTTCAGCTGGGTACAGATTTTTTGTGTTGATAGGCTATCTGGAAAAGCGAATGTAATAAAAATTATCTCGATGCTTGAGGACTCCTGAAGCTTTGTAATAATGTTTAATGTTTTGTACTGTGTAGTTCCTTCCTTGGTTGGGTTGTTTCAGTGGAAGTTTCTCCATTAGAAATGTCTTCATGAACTGAATTTAAAGGGCAATGCTAGGAATGAATATTGGAGTGGTTAAAGATGAACACAACCATTCTGTGCTCTGTATGTTTTATTGTG GAAAaaaggga ] [-] EMBL CB640003 [ GGGGACAAGCTGTACGGGACAGAAGTCATTCACCCATGCGTAACAAGCCCATGAACAGGGGACTAGACTTACGGGAGAGAAGCCGTTCACCCTTTCGGGACAGGCCCTTGAACAAAGCCTCCATTGGAAGAGGTGGACCTGACCGAGACTATGTTCATCCATTTGACACCCATGGGCGACCTCATAATTTGGGCAATAGCCGTGGCCATGGTTACAGGCAGGAGGAT GATCTGTTTCCTATTCGCAATCAAGGTGACCAGCGTGTCCTTTCCCGTCATCGGAATGGAATCCACTGAAATGTAATATCTTTCAGCTGGGTACAGATTCTTCGTGTTGATAGGCTATCTGGAAAAGCGAATCTAATAAAAATTATCTCGATGCTTGAGGACTCCTGAAGCTTTGTAATAATGTTTAATGTTTTGTACTGTGTAGTTACTTCCTTGGTTGGGTTGTTTCAGTGGAAGTTTCACCATTAGAAATGTCTTCATGAACTGAATTTAAAGGGCAATGCTAGGAATGAATATTGGAGTGGTTAAAGATGAACACAACCATACTGTGCTCTGTATGTTTTATTGTGTGAAATCTTGAGGTGTAAA] [-] EMBL CB636354 [ AGTCATTCACCCATGCGTAACAAGCCCATGAACAGGGGACTAGACTTACGGGAGAGAAGCCGTTCACCCTTTCGGGACAGGCCCTTGAACAAAGCCTCCATTGGAAGAGGTGGACCTGACCGAGACTATGTTCATCCATTTGACACCCATGGGCGACCTCATAATTTGGGCAATAGCCGTGGCCATGGTTACAGGCAGGAGGAT GATCTGTTTCCTATTCGCAATCAAGGTGACCAGCGTGTCCTTTCCCGTCATCGGAATGGAATCCACTGAAATGTAATATCTTTCAGCTGGGTACAGATTCTTCGTGTTGATAGGCTATCTGGAAAAGCGAATCTAATAAAAATTATCTCGATGCTTGAGGACTCCTGAAGCTTTGTAATAATGTTTAATGTTTTGTACTGTGTAGTTACTTCCTTGGTTGGGTTGTTTCAGTGGAAGTTTCACCATTAGAAATGTCTTCATGAACTGAATTTAAAGGGCAATGCTAGGAATGAATATTGGAGTGGTTAAAGATGAACACAACCATACTGTGCTCTGTATGTTTTATTGTGTGAAATCTTGAGGTGTAA ] [-] EMBL AW069923 [ GCCGAGGTTACAGGCA GAGGATNGATCTGTTTCCTATTCGCAATCAAGGTGACCAGCGTGTCCTCTCCCGTCATCGGAATGGAATCCACTGAAATGTAATATCTTTC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||