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Oryza sativa
cluster # 8726 cluster # 8726       Sequences # 5       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8726#0 length = 1751 sequences # 1  
consensus_8726#1 length = 1402 sequences # 1  
consensus_8726#2 length = 1306 sequences # 1  
consensus_8726#3 length = 1238 sequences # 1  
consensus_8726#4 length = 904 sequences # 1  

consensusID : consensus_8726#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1751
fasta sequence
                              [GTCAAGTTCAGAGTTGTTGTGTTCGTTTTTTTGTCTATTCTTTTTTATCCCTCCCCCCTTTCTCATCTCTTACTCTCTCCACAGGCCTGGTGCCATCTAATCACTACACTACCGACGACCTTTTCCCCCAAGCCCCCATTTTTTTTTTTAGCAATTATTCAATTCTTTGTGGCCGGTCCACTCCAACGTAATACGCAGCTCTACTTGCTCGAAACGAACGACCAAAATCATACCGACAACGTAACCTCGCACCCCTCAGCGAGACTCTCGACATACACACACTCAACCTCCTCAGCAATCTTGACGTCTATCCATTAGTTTGGTACTGGACGAATTGAAAGAAACGAAAAATATCATAATACAAGTCTTTTTACACAGAAAGAAAGAGATAGAATCACAATGGCCGCTATCCAGCTCAACTTTACTCTCCGCACTTCCTCCAACTGCAAGACAGTCCACCTTCTCGGTTCCTGGGATGGCTATCAAGGTCAGCTCCCGCTTTCCAAGGATCCCAAGAAGTCAGGTGGCTGGGTCGGATGCTTCAAGTTCCAAGGACAGACTTTGAAGCAAGGTCAGCGATACTGGTACTACTACATCATCGACGGCTACCATGTCTCGCACGACCCCGCCAAGGACCACACGACTGAACCCACCACTGGTCGCAAGCTCAACATCATCGACATCCCCGCTGCCAAGTCAAGCTCAAAGTCATCCTCATCCAGTGCCGACCGCAAGACCCGCCGTGTCTCAACTGCTTCCATCCCAAAGGGTCGCGGCCTCAGTCCAGAGCGCATCGTTGCCCCTAAGCCCCAACGGCCCAACGAGACGCGCCAAGTCATCAACACCCAGTACGACAAGACCACCTTGGAAGAACTCAATCGCCGCTTCGCCACTCAAAAGATTGAAGAGTCATCAGACGACTCCGAATACAGCTCCGATGAGGACTCAGACGTCCCATCGCTCACCAGCCGCTCGACAAACAGCTCTAGTCCGTCCAGTATCAGCTCTGGCAGCTCATGCTGCACGTGCGAACGCTACGGCATCACCCGCACTGGTGACCGCGTCAAACTTGACTGCGGTGGTGCACGCTGTGGATACTCTGATGATTCTTCCGAATGCTCATCCGAGGACGAGTACGTGTACGAGGAGAAGACCACCCGCCGCCAAGGTGTTGTCATACGCGCTTAAGAACGCCTTCTCTTCCTACCGCTTCACCCTCTGGACAGCCATTTGTGCCGTGTCTTTTTTTTTCTGTTCGCCTACCCTCGTGCGACAGACCGAAGACGACCACCTACCTTTCTTCCTTCTTTCATGTGCATATTATGATAACGACACTTTTTTTTTCTCTTTCTTTTACTTCTTCTTATACCACAGCCGTCGCTAGCCTCGCACCTTTGAGAGACTCCGGCTTTCCACTCACTTATTCTAATTGGATCTGCTTTTTTAATAACGACGACATGCGACATGCTTTGTTTTCTGTTGCTGCTGGAATTTTCCCCCAACTCGAGAGTTGGGAGGGGGCGGATGGGAAGGAAAACATGGAACAAGCGAACACGCCCTCCTCCTATCTTACCCTCTCTCCCTCTCTTTCCCTCACTCTTGCACGCTTACGAACTCTTAAACACCGGGCGGAAAAGCTTGTCTTGTTCCGCGTCGGGAAAGCAAAGAAAAAAACATTCTAGATATGTTTTTGCTAAATGTGCCAATCTGCACGCCTCATGTAGGTTTTATACTCTGCTCGAATACCAATG]

[+] EMBL AK110553             [GTCAAGTTCAGAGTTGTTGTGTTCGTTTTTTTGTCTATTCTTTTTTATCCCTCCCCCCTTTCTCATCTCTTACTCTCTCCACAGGCCTGGTGCCATCTAATCACTACACTACCGACGACCTTTTCCCCCAAGCCCCCATTTTTTTTTTTAGCAATTATTCAATTCTTTGTGGCCGGTCCACTCCAACGTAATACGCAGCTCTACTTGCTCGAAACGAACGACCAAAATCATACCGACAACGTAACCTCGCACCCCTCAGCGAGACTCTCGACATACACACACTCAACCTCCTCAGCAATCTTGACGTCTATCCATTAGTTTGGTACTGGACGAATTGAAAGAAACGAAAAATATCATAATACAAGTCTTTTTACACAGAAAGAAAGAGATAGAATCACAATGGCCGCTATCCAGCTCAACTTTACTCTCCGCACTTCCTCCAACTGCAAGACAGTCCACCTTCTCGGTTCCTGGGATGGCTATCAAGGTCAGCTCCCGCTTTCCAAGGATCCCAAGAAGTCAGGTGGCTGGGTCGGATGCTTCAAGTTCCAAGGACAGACTTTGAAGCAAGGTCAGCGATACTGGTACTACTACATCATCGACGGCTACCATGTCTCGCACGACCCCGCCAAGGACCACACGACTGAACCCACCACTGGTCGCAAGCTCAACATCATCGACATCCCCGCTGCCAAGTCAAGCTCAAAGTCATCCTCATCCAGTGCCGACCGCAAGACCCGCCGTGTCTCAACTGCTTCCATCCCAAAGGGTCGCGGCCTCAGTCCAGAGCGCATCGTTGCCCCTAAGCCCCAACGGCCCAACGAGACGCGCCAAGTCATCAACACCCAGTACGACAAGACCACCTTGGAAGAACTCAATCGCCGCTTCGCCACTCAAAAGATTGAAGAGTCATCAGACGACTCCGAATACAGCTCCGATGAGGACTCAGACGTCCCATCGCTCACCAGCCGCTCGACAAACAGCTCTAGTCCGTCCAGTATCAGCTCTGGCAGCTCATGCTGCACGTGCGAACGCTACGGCATCACCCGCACTGGTGACCGCGTCAAACTTGACTGCGGTGGTGCACGCTGTGGATACTCTGATGATTCTTCCGAATGCTCATCCGAGGACGAGTACGTGTACGAGGAGAAGACCACCCGCCGCCAAGGTGTTGTCATACGCGCTTAAGAACGCCTTCTCTTCCTACCGCTTCACCCTCTGGACAGCCATTTGTGCCGTGTCTTTTTTTTTCTGTTCGCCTACCCTCGTGCGACAGACCGAAGACGACCACCTACCTTTCTTCCTTCTTTCATGTGCATATTATGATAACGACACTTTTTTTTTCTCTTTCTTTTACTTCTTCTTATACCACAGCCGTCGCTAGCCTCGCACCTTTGAGAGACTCCGGCTTTCCACTCACTTATTCTAATTGGATCTGCTTTTTTAATAACGACGACATGCGACATGCTTTGTTTTCTGTTGCTGCTGGAATTTTCCCCCAACTCGAGAGTTGGGAGGGGGCGGATGGGAAGGAAAACATGGAACAAGCGAACACGCCCTCCTCCTATCTTACCCTCTCTCCCTCTCTTTCCCTCACTCTTGCACGCTTACGAACTCTTAAACACCGGGCGGAAAAGCTTGTCTTGTTCCGCGTCGGGAAAGCAAAGAAAAAAACATTCTAGATATGTTTTTGCTAAATGTGCCAATCTGCACGCCTCATGTAGGTTTTATACTCTGCTCGAATACCAATG]


>consensus_8726#0 GTCAAGTTCAGAGTTGTTGTGTTCGTTTTTTTGTCTATTCTTTTTTATCCCTCCCCCCTT TCTCATCTCTTACTCTCTCCACAGGCCTGGTGCCATCTAATCACTACACTACCGACGACC TTTTCCCCCAAGCCCCCATTTTTTTTTTTAGCAATTATTCAATTCTTTGTGGCCGGTCCA CTCCAACGTAATACGCAGCTCTACTTGCTCGAAACGAACGACCAAAATCATACCGACAAC GTAACCTCGCACCCCTCAGCGAGACTCTCGACATACACACACTCAACCTCCTCAGCAATC TTGACGTCTATCCATTAGTTTGGTACTGGACGAATTGAAAGAAACGAAAAATATCATAAT ACAAGTCTTTTTACACAGAAAGAAAGAGATAGAATCACAATGGCCGCTATCCAGCTCAAC TTTACTCTCCGCACTTCCTCCAACTGCAAGACAGTCCACCTTCTCGGTTCCTGGGATGGC TATCAAGGTCAGCTCCCGCTTTCCAAGGATCCCAAGAAGTCAGGTGGCTGGGTCGGATGC TTCAAGTTCCAAGGACAGACTTTGAAGCAAGGTCAGCGATACTGGTACTACTACATCATC GACGGCTACCATGTCTCGCACGACCCCGCCAAGGACCACACGACTGAACCCACCACTGGT CGCAAGCTCAACATCATCGACATCCCCGCTGCCAAGTCAAGCTCAAAGTCATCCTCATCC AGTGCCGACCGCAAGACCCGCCGTGTCTCAACTGCTTCCATCCCAAAGGGTCGCGGCCTC AGTCCAGAGCGCATCGTTGCCCCTAAGCCCCAACGGCCCAACGAGACGCGCCAAGTCATC AACACCCAGTACGACAAGACCACCTTGGAAGAACTCAATCGCCGCTTCGCCACTCAAAAG ATTGAAGAGTCATCAGACGACTCCGAATACAGCTCCGATGAGGACTCAGACGTCCCATCG CTCACCAGCCGCTCGACAAACAGCTCTAGTCCGTCCAGTATCAGCTCTGGCAGCTCATGC TGCACGTGCGAACGCTACGGCATCACCCGCACTGGTGACCGCGTCAAACTTGACTGCGGT GGTGCACGCTGTGGATACTCTGATGATTCTTCCGAATGCTCATCCGAGGACGAGTACGTG TACGAGGAGAAGACCACCCGCCGCCAAGGTGTTGTCATACGCGCTTAAGAACGCCTTCTC TTCCTACCGCTTCACCCTCTGGACAGCCATTTGTGCCGTGTCTTTTTTTTTCTGTTCGCC TACCCTCGTGCGACAGACCGAAGACGACCACCTACCTTTCTTCCTTCTTTCATGTGCATA TTATGATAACGACACTTTTTTTTTCTCTTTCTTTTACTTCTTCTTATACCACAGCCGTCG CTAGCCTCGCACCTTTGAGAGACTCCGGCTTTCCACTCACTTATTCTAATTGGATCTGCT TTTTTAATAACGACGACATGCGACATGCTTTGTTTTCTGTTGCTGCTGGAATTTTCCCCC AACTCGAGAGTTGGGAGGGGGCGGATGGGAAGGAAAACATGGAACAAGCGAACACGCCCT CCTCCTATCTTACCCTCTCTCCCTCTCTTTCCCTCACTCTTGCACGCTTACGAACTCTTA AACACCGGGCGGAAAAGCTTGTCTTGTTCCGCGTCGGGAAAGCAAAGAAAAAAACATTCT AGATATGTTTTTGCTAAATGTGCCAATCTGCACGCCTCATGTAGGTTTTATACTCTGCTC GAATACCAATG



consensusID : consensus_8726#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1402
fasta sequence
                              [CCTGGTGCCATTATTAATCTACCTTTACCACTAATTCACTTCCACATCCTCGTCGCCGGTCGACAGCCAATCAACGTTAATTTTCAGCTCTACTTGCTCAGTTCAATCTTCACAACCACCACCAACAACTCGATAATCGCGCAAACTCGCATTCTTCACGAATCGCTACAGCTTCTACAGCATTAATTTCGTCTATCCATTAGTTTGGCCCGGACGAATCGAAAGATCATCGCTATCATATCTCAATCTCTAAAGAAAGAATAATCACCACATTCACAATGGCATCAATCCAACTCAACTTCACTCTCCGCACTTCCTCCAACTGCAAGACCGTCCATCTTCTCGGCTCATGGGACGGCTACCAGGGACAACTCCCACTCTCCAAGGACCCCAAGAAGTCCGGCGGCTGGAACGGATGCTTCAAGTTCAATGGTGCCACTCTTCAACAAGGCCAGCGCTACTGGTACTACTACATCATTGACGGCTACCACGTTTCCCACGACCCCGCTAAGGACCACACTACCGAGCCCACTACCGGCCGCAAGCTCAACATCATCGACATCCCAGCTGCAAAGTCATCCTCAAAAAGCTCAAGCTCCGACCGCAAGTCCCGCCGCGTCTCAACCGCCTCCATTCCAAAGGGCCGTGGCGTCTCTCCCGAGCGCATCGTCGCACCCAAGCCCCAGCGCCCAGGCCAGACCCGACAAGTCATCAACACCCAGTACGACAAGACCACCCTTGAGGAGCTCAACCGCCGCTTTGCCAAGCAGTCCATGGAGGAATCTTCTGATGAAGAGGATGACGACTCCGAATATGACTCCGGCTCCGATGTCCCATCCCTCACCTCCCGCTCCACCAACTCGAGCTCGCCCAGCAGCATCAGCTCTGGCAGCAGCTGCTGCACATGCGAGCGCTTTGGCATCACCCGCTCTGGTGATCGTGTCAAGCTCGACTGCGGAGGTGCGCGATGCGGATACTCTGATGACTCATCAGATTGCTCATCTGAGGACGAGTACGTGTACGAAGAGAAGACGACCCGCCGCCAGGGCGTCGTCATCCGCTCCTAGATGTGCAACTTCGACATCAGGACCTCATCATCGTGAATTCAACATGTCTGTCGCATTCGCCCTTGCGCTTGCGTCGACCCTCTTTCTTTCTGTGCATATTATGATAACGACTTTTTTCTTTCCTACTCTGTTCGACAAATGTATCCATTCATTGGTAGATATGACTTTCTTGCTGCTGGTATTGTTGCCGTTAGAGATTTTACTCTGGGGAGGAATACAGCGAGCCACTCTTTTTGCGCTGGCTACGGACATCACATTATGTGCCCGATGTCTTCATGCGACAATGCACGCTCATGTAGAACCATGTATAAACAAATTAACGAATTCGCATGGCT]

[+] EMBL AK108844             [CCTGGTGCCATTATTAATCTACCTTTACCACTAATTCACTTCCACATCCTCGTCGCCGGTCGACAGCCAATCAACGTTAATTTTCAGCTCTACTTGCTCAGTTCAATCTTCACAACCACCACCAACAACTCGATAATCGCGCAAACTCGCATTCTTCACGAATCGCTACAGCTTCTACAGCATTAATTTCGTCTATCCATTAGTTTGGCCCGGACGAATCGAAAGATCATCGCTATCATATCTCAATCTCTAAAGAAAGAATAATCACCACATTCACAATGGCATCAATCCAACTCAACTTCACTCTCCGCACTTCCTCCAACTGCAAGACCGTCCATCTTCTCGGCTCATGGGACGGCTACCAGGGACAACTCCCACTCTCCAAGGACCCCAAGAAGTCCGGCGGCTGGAACGGATGCTTCAAGTTCAATGGTGCCACTCTTCAACAAGGCCAGCGCTACTGGTACTACTACATCATTGACGGCTACCACGTTTCCCACGACCCCGCTAAGGACCACACTACCGAGCCCACTACCGGCCGCAAGCTCAACATCATCGACATCCCAGCTGCAAAGTCATCCTCAAAAAGCTCAAGCTCCGACCGCAAGTCCCGCCGCGTCTCAACCGCCTCCATTCCAAAGGGCCGTGGCGTCTCTCCCGAGCGCATCGTCGCACCCAAGCCCCAGCGCCCAGGCCAGACCCGACAAGTCATCAACACCCAGTACGACAAGACCACCCTTGAGGAGCTCAACCGCCGCTTTGCCAAGCAGTCCATGGAGGAATCTTCTGATGAAGAGGATGACGACTCCGAATATGACTCCGGCTCCGATGTCCCATCCCTCACCTCCCGCTCCACCAACTCGAGCTCGCCCAGCAGCATCAGCTCTGGCAGCAGCTGCTGCACATGCGAGCGCTTTGGCATCACCCGCTCTGGTGATCGTGTCAAGCTCGACTGCGGAGGTGCGCGATGCGGATACTCTGATGACTCATCAGATTGCTCATCTGAGGACGAGTACGTGTACGAAGAGAAGACGACCCGCCGCCAGGGCGTCGTCATCCGCTCCTAGATGTGCAACTTCGACATCAGGACCTCATCATCGTGAATTCAACATGTCTGTCGCATTCGCCCTTGCGCTTGCGTCGACCCTCTTTCTTTCTGTGCATATTATGATAACGACTTTTTTCTTTCCTACTCTGTTCGACAAATGTATCCATTCATTGGTAGATATGACTTTCTTGCTGCTGGTATTGTTGCCGTTAGAGATTTTACTCTGGGGAGGAATACAGCGAGCCACTCTTTTTGCGCTGGCTACGGACATCACATTATGTGCCCGATGTCTTCATGCGACAATGCACGCTCATGTAGAACCATGTATAAACAAATTAACGAATTCGCATGGCT]


>consensus_8726#1 CCTGGTGCCATTATTAATCTACCTTTACCACTAATTCACTTCCACATCCTCGTCGCCGGT CGACAGCCAATCAACGTTAATTTTCAGCTCTACTTGCTCAGTTCAATCTTCACAACCACC ACCAACAACTCGATAATCGCGCAAACTCGCATTCTTCACGAATCGCTACAGCTTCTACAG CATTAATTTCGTCTATCCATTAGTTTGGCCCGGACGAATCGAAAGATCATCGCTATCATA TCTCAATCTCTAAAGAAAGAATAATCACCACATTCACAATGGCATCAATCCAACTCAACT TCACTCTCCGCACTTCCTCCAACTGCAAGACCGTCCATCTTCTCGGCTCATGGGACGGCT ACCAGGGACAACTCCCACTCTCCAAGGACCCCAAGAAGTCCGGCGGCTGGAACGGATGCT TCAAGTTCAATGGTGCCACTCTTCAACAAGGCCAGCGCTACTGGTACTACTACATCATTG ACGGCTACCACGTTTCCCACGACCCCGCTAAGGACCACACTACCGAGCCCACTACCGGCC GCAAGCTCAACATCATCGACATCCCAGCTGCAAAGTCATCCTCAAAAAGCTCAAGCTCCG ACCGCAAGTCCCGCCGCGTCTCAACCGCCTCCATTCCAAAGGGCCGTGGCGTCTCTCCCG AGCGCATCGTCGCACCCAAGCCCCAGCGCCCAGGCCAGACCCGACAAGTCATCAACACCC AGTACGACAAGACCACCCTTGAGGAGCTCAACCGCCGCTTTGCCAAGCAGTCCATGGAGG AATCTTCTGATGAAGAGGATGACGACTCCGAATATGACTCCGGCTCCGATGTCCCATCCC TCACCTCCCGCTCCACCAACTCGAGCTCGCCCAGCAGCATCAGCTCTGGCAGCAGCTGCT GCACATGCGAGCGCTTTGGCATCACCCGCTCTGGTGATCGTGTCAAGCTCGACTGCGGAG GTGCGCGATGCGGATACTCTGATGACTCATCAGATTGCTCATCTGAGGACGAGTACGTGT ACGAAGAGAAGACGACCCGCCGCCAGGGCGTCGTCATCCGCTCCTAGATGTGCAACTTCG ACATCAGGACCTCATCATCGTGAATTCAACATGTCTGTCGCATTCGCCCTTGCGCTTGCG TCGACCCTCTTTCTTTCTGTGCATATTATGATAACGACTTTTTTCTTTCCTACTCTGTTC GACAAATGTATCCATTCATTGGTAGATATGACTTTCTTGCTGCTGGTATTGTTGCCGTTA GAGATTTTACTCTGGGGAGGAATACAGCGAGCCACTCTTTTTGCGCTGGCTACGGACATC ACATTATGTGCCCGATGTCTTCATGCGACAATGCACGCTCATGTAGAACCATGTATAAAC AAATTAACGAATTCGCATGGCT



consensusID : consensus_8726#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1306
fasta sequence
                              [TCGTCGCCGGTCGACACACCACCAACCCAACGTTAATTCCAGCTCTACTTGCTCAACACAAACTTCACCAAATCAACACTCGATAATCGCGCATACTCGCAATTCTTCACGAATCAACACAGCTTCTTCAGCATTACTTCGTCTATCCATTAGTTTGGCCAGGACGAATCGAAAGAATACCATCATAATTCAACTCTCCAAGAAAGAATAATCAACACACATCACAATGGCCGCTATCCAGCTCAACTTCACTCTCCGCACTTCCGCCAACTGCAAGACCGTCCACCTTCTCGGCTCCTGGGACGGCTACCAGGGTCAGCTCCCACTCTCCAAGGACACCAAGAAGTCTGGAGGCTGGACTGGCTGCTTCAAGTTCAACGGCGCCACTCTCAAGCAGGGCCAACGTTACTGGTACTACTACATCATCGACGGCTACCACGTCTCGCACGACCCCGCCAAGGACCACACCACCGAGCCCACCACCGGCCGCAAGCTCAACATCATCGACATCCCCGCCGCCAAGTCATCGTCGACCAGCTCCGACCGCAAGTCTCGCCGCGTCTCCGCCAACATCGCCAAGGGCCGTTCCCTCAGCCCCGAGCGCATCGTTGCCCCCAAGCCCCAGCGCCCAGGTGAGACCCGCCAGGTCATCAACACCCAGTACGACAAGACCACCCTCGAGGAGCTCAACCGCCGCTTTGCTGCCCAGTCCGTCGAGGACGACTCTGAGGATGACTCCGACTACGACTCCGATGTCCCATCGCTTACCTCTCGCTCCACCAACTCGAGCTCGCCCAGCAGTGTCAGCTCTGGTAGCAGCTGCTGCACATGCGAGCGCTTTGGCATTACCCGCGCCGGTAACCGCGTCAAGCTTGACTGCGGAGGTTCGCGATGCGGATACTCTGACGACTCGGAGGACTGCTCTTCTGAGGACGAGTACGTGTACGAGGAGAAGACGACCCGCCGCCAGGGCATCGTCGTCCGCTCGTAGATTGCCTACCCAACTCACCTCACTGTCAACAATTGCTTACCCCACCTTGGACACCATTGTGTTTCCCACACCCATTCTTTCTGTGCATATTATGATTACGACATTTTTTCCTTTTCGTTCTTACAACAAGATCCGCTCTTTGGATATGATTATTTATTGCTGCTGGTATGGAGGTCCTGGAGGTTTACTCAGGGGAAGGATACAGCGAGCCACTCTTTTTGCGCTGGCTATGGACATCACTTATTGCCCGATGTCAGATCATGCGACAATGCACGCTCATGTAGAATTAGATCTAATCAAATGGATTCGCATGGC]

[+] EMBL AK109129             [TCGTCGCCGGTCGACACACCACCAACCCAACGTTAATTCCAGCTCTACTTGCTCAACACAAACTTCACCAAATCAACACTCGATAATCGCGCATACTCGCAATTCTTCACGAATCAACACAGCTTCTTCAGCATTACTTCGTCTATCCATTAGTTTGGCCAGGACGAATCGAAAGAATACCATCATAATTCAACTCTCCAAGAAAGAATAATCAACACACATCACAATGGCCGCTATCCAGCTCAACTTCACTCTCCGCACTTCCGCCAACTGCAAGACCGTCCACCTTCTCGGCTCCTGGGACGGCTACCAGGGTCAGCTCCCACTCTCCAAGGACACCAAGAAGTCTGGAGGCTGGACTGGCTGCTTCAAGTTCAACGGCGCCACTCTCAAGCAGGGCCAACGTTACTGGTACTACTACATCATCGACGGCTACCACGTCTCGCACGACCCCGCCAAGGACCACACCACCGAGCCCACCACCGGCCGCAAGCTCAACATCATCGACATCCCCGCCGCCAAGTCATCGTCGACCAGCTCCGACCGCAAGTCTCGCCGCGTCTCCGCCAACATCGCCAAGGGCCGTTCCCTCAGCCCCGAGCGCATCGTTGCCCCCAAGCCCCAGCGCCCAGGTGAGACCCGCCAGGTCATCAACACCCAGTACGACAAGACCACCCTCGAGGAGCTCAACCGCCGCTTTGCTGCCCAGTCCGTCGAGGACGACTCTGAGGATGACTCCGACTACGACTCCGATGTCCCATCGCTTACCTCTCGCTCCACCAACTCGAGCTCGCCCAGCAGTGTCAGCTCTGGTAGCAGCTGCTGCACATGCGAGCGCTTTGGCATTACCCGCGCCGGTAACCGCGTCAAGCTTGACTGCGGAGGTTCGCGATGCGGATACTCTGACGACTCGGAGGACTGCTCTTCTGAGGACGAGTACGTGTACGAGGAGAAGACGACCCGCCGCCAGGGCATCGTCGTCCGCTCGTAGATTGCCTACCCAACTCACCTCACTGTCAACAATTGCTTACCCCACCTTGGACACCATTGTGTTTCCCACACCCATTCTTTCTGTGCATATTATGATTACGACATTTTTTCCTTTTCGTTCTTACAACAAGATCCGCTCTTTGGATATGATTATTTATTGCTGCTGGTATGGAGGTCCTGGAGGTTTACTCAGGGGAAGGATACAGCGAGCCACTCTTTTTGCGCTGGCTATGGACATCACTTATTGCCCGATGTCAGATCATGCGACAATGCACGCTCATGTAGAATTAGATCTAATCAAATGGATTCGCATGGC]


>consensus_8726#2 TCGTCGCCGGTCGACACACCACCAACCCAACGTTAATTCCAGCTCTACTTGCTCAACACA AACTTCACCAAATCAACACTCGATAATCGCGCATACTCGCAATTCTTCACGAATCAACAC AGCTTCTTCAGCATTACTTCGTCTATCCATTAGTTTGGCCAGGACGAATCGAAAGAATAC CATCATAATTCAACTCTCCAAGAAAGAATAATCAACACACATCACAATGGCCGCTATCCA GCTCAACTTCACTCTCCGCACTTCCGCCAACTGCAAGACCGTCCACCTTCTCGGCTCCTG GGACGGCTACCAGGGTCAGCTCCCACTCTCCAAGGACACCAAGAAGTCTGGAGGCTGGAC TGGCTGCTTCAAGTTCAACGGCGCCACTCTCAAGCAGGGCCAACGTTACTGGTACTACTA CATCATCGACGGCTACCACGTCTCGCACGACCCCGCCAAGGACCACACCACCGAGCCCAC CACCGGCCGCAAGCTCAACATCATCGACATCCCCGCCGCCAAGTCATCGTCGACCAGCTC CGACCGCAAGTCTCGCCGCGTCTCCGCCAACATCGCCAAGGGCCGTTCCCTCAGCCCCGA GCGCATCGTTGCCCCCAAGCCCCAGCGCCCAGGTGAGACCCGCCAGGTCATCAACACCCA GTACGACAAGACCACCCTCGAGGAGCTCAACCGCCGCTTTGCTGCCCAGTCCGTCGAGGA CGACTCTGAGGATGACTCCGACTACGACTCCGATGTCCCATCGCTTACCTCTCGCTCCAC CAACTCGAGCTCGCCCAGCAGTGTCAGCTCTGGTAGCAGCTGCTGCACATGCGAGCGCTT TGGCATTACCCGCGCCGGTAACCGCGTCAAGCTTGACTGCGGAGGTTCGCGATGCGGATA CTCTGACGACTCGGAGGACTGCTCTTCTGAGGACGAGTACGTGTACGAGGAGAAGACGAC CCGCCGCCAGGGCATCGTCGTCCGCTCGTAGATTGCCTACCCAACTCACCTCACTGTCAA CAATTGCTTACCCCACCTTGGACACCATTGTGTTTCCCACACCCATTCTTTCTGTGCATA TTATGATTACGACATTTTTTCCTTTTCGTTCTTACAACAAGATCCGCTCTTTGGATATGA TTATTTATTGCTGCTGGTATGGAGGTCCTGGAGGTTTACTCAGGGGAAGGATACAGCGAG CCACTCTTTTTGCGCTGGCTATGGACATCACTTATTGCCCGATGTCAGATCATGCGACAA TGCACGCTCATGTAGAATTAGATCTAATCAAATGGATTCGCATGGC



consensusID : consensus_8726#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1238
fasta sequence
                              [ATAGCGCAACTCGCATTCTTCCCGAATCACCACTGCTTCATCAGCATCGCTTCGTCTTCCCATTAGCTTGGCCAGGACGATAATTGAAAGAACACCACCATCATAATACAATTTCTCACGGAAGAATAACCCACAACACTCGCAATGGCGTCAATCCAGCTCAACTTCACGCTCCGCACTTCGGCAAACTGCAAAACCGTCCATCTCCTTGGTTCATGGGACGGCTACCAGGGACAACTCCCACTCTCCAAGGACCCCAAGAAGTCAGGAGGCTGGACAGGATGCTTCAAGTTCAACGGCGCCACACTCCAACAGGGCCAGCGCTACTGGTACTACTACATCATCGACGGCTACCACGTCTCGCACGACCCGGCAAAGGACCACACAACTGAGCCAACCACCGGCCGCAAGCTCAACATCATTGACATCCCCGCCGCCAAGTCGTCGCACGCAAAGACCTCAAGCAGCGCCGACCGCAAAGCTTCCCGTCGCATCTCCACCGCGTCCGCCGCATCCGTCGCAAAGGGCCGCGCACTCAGCCCAGAGCGCATCGTCGCGCCAGCACCACAACGACCCGGCCAGACACGACAAGTCATCAACACCCAGTACGACAAGACCACACTCGAGGAGCTCAACCGACGCTTCGCCCAACAGACCGTCGAAGACTCCTCCGACTCCGAGTACGACTCCGACGACTCTGGCTCCGACGTCCCATCGCTCACGTCCCGCTCCACCAACTCAAGCTCGCCCAGCAGCGTCAGCTCTGGCAGCAGCTGCTGCACATGCGAGCGCTTTGGCATCACGCGCTCCGGCGACCGTGTCAAGCTCGACTGCGGAGGAGCGCGATGCGGATACTCGGACGACTCTGAGAGCTGCTCGTCGGAAGACGAGTACGTGTACGAGGAGAAGACAACACGCCGCCAGGGCGTCGTCATCCGCGCTTAAGTGTCCGGACAACATCCATCGGCTCGACCCTCGCGCTTTGCGAAGTGTTCGCCAACCCCATTCTTTCTGTGCATATTATGATTTTGTAGCGACTCTTTCCTTTTATTGTTCAATATTGCTTCCGCTCCTTGGCTAGATGGTGCGAAGTGTTGCTGCTGGTATGAAGGCTGCTGGGAGGAGGATTGGATTGCGAGCCACTCTTTGCGCTGGCTATGGACATCACTTACTTGCCCGATGTCAGAGACGCGACAATGCACGCTTATGTAGAAACCTAATCGATGAATTCGCATGGC]

[+] EMBL AK109005             [ATAGCGCAACTCGCATTCTTCCCGAATCACCACTGCTTCATCAGCATCGCTTCGTCTTCCCATTAGCTTGGCCAGGACGATAATTGAAAGAACACCACCATCATAATACAATTTCTCACGGAAGAATAACCCACAACACTCGCAATGGCGTCAATCCAGCTCAACTTCACGCTCCGCACTTCGGCAAACTGCAAAACCGTCCATCTCCTTGGTTCATGGGACGGCTACCAGGGACAACTCCCACTCTCCAAGGACCCCAAGAAGTCAGGAGGCTGGACAGGATGCTTCAAGTTCAACGGCGCCACACTCCAACAGGGCCAGCGCTACTGGTACTACTACATCATCGACGGCTACCACGTCTCGCACGACCCGGCAAAGGACCACACAACTGAGCCAACCACCGGCCGCAAGCTCAACATCATTGACATCCCCGCCGCCAAGTCGTCGCACGCAAAGACCTCAAGCAGCGCCGACCGCAAAGCTTCCCGTCGCATCTCCACCGCGTCCGCCGCATCCGTCGCAAAGGGCCGCGCACTCAGCCCAGAGCGCATCGTCGCGCCAGCACCACAACGACCCGGCCAGACACGACAAGTCATCAACACCCAGTACGACAAGACCACACTCGAGGAGCTCAACCGACGCTTCGCCCAACAGACCGTCGAAGACTCCTCCGACTCCGAGTACGACTCCGACGACTCTGGCTCCGACGTCCCATCGCTCACGTCCCGCTCCACCAACTCAAGCTCGCCCAGCAGCGTCAGCTCTGGCAGCAGCTGCTGCACATGCGAGCGCTTTGGCATCACGCGCTCCGGCGACCGTGTCAAGCTCGACTGCGGAGGAGCGCGATGCGGATACTCGGACGACTCTGAGAGCTGCTCGTCGGAAGACGAGTACGTGTACGAGGAGAAGACAACACGCCGCCAGGGCGTCGTCATCCGCGCTTAAGTGTCCGGACAACATCCATCGGCTCGACCCTCGCGCTTTGCGAAGTGTTCGCCAACCCCATTCTTTCTGTGCATATTATGATTTTGTAGCGACTCTTTCCTTTTATTGTTCAATATTGCTTCCGCTCCTTGGCTAGATGGTGCGAAGTGTTGCTGCTGGTATGAAGGCTGCTGGGAGGAGGATTGGATTGCGAGCCACTCTTTGCGCTGGCTATGGACATCACTTACTTGCCCGATGTCAGAGACGCGACAATGCACGCTTATGTAGAAACCTAATCGATGAATTCGCATGGC]


>consensus_8726#3 ATAGCGCAACTCGCATTCTTCCCGAATCACCACTGCTTCATCAGCATCGCTTCGTCTTCC CATTAGCTTGGCCAGGACGATAATTGAAAGAACACCACCATCATAATACAATTTCTCACG GAAGAATAACCCACAACACTCGCAATGGCGTCAATCCAGCTCAACTTCACGCTCCGCACT TCGGCAAACTGCAAAACCGTCCATCTCCTTGGTTCATGGGACGGCTACCAGGGACAACTC CCACTCTCCAAGGACCCCAAGAAGTCAGGAGGCTGGACAGGATGCTTCAAGTTCAACGGC GCCACACTCCAACAGGGCCAGCGCTACTGGTACTACTACATCATCGACGGCTACCACGTC TCGCACGACCCGGCAAAGGACCACACAACTGAGCCAACCACCGGCCGCAAGCTCAACATC ATTGACATCCCCGCCGCCAAGTCGTCGCACGCAAAGACCTCAAGCAGCGCCGACCGCAAA GCTTCCCGTCGCATCTCCACCGCGTCCGCCGCATCCGTCGCAAAGGGCCGCGCACTCAGC CCAGAGCGCATCGTCGCGCCAGCACCACAACGACCCGGCCAGACACGACAAGTCATCAAC ACCCAGTACGACAAGACCACACTCGAGGAGCTCAACCGACGCTTCGCCCAACAGACCGTC GAAGACTCCTCCGACTCCGAGTACGACTCCGACGACTCTGGCTCCGACGTCCCATCGCTC ACGTCCCGCTCCACCAACTCAAGCTCGCCCAGCAGCGTCAGCTCTGGCAGCAGCTGCTGC ACATGCGAGCGCTTTGGCATCACGCGCTCCGGCGACCGTGTCAAGCTCGACTGCGGAGGA GCGCGATGCGGATACTCGGACGACTCTGAGAGCTGCTCGTCGGAAGACGAGTACGTGTAC GAGGAGAAGACAACACGCCGCCAGGGCGTCGTCATCCGCGCTTAAGTGTCCGGACAACAT CCATCGGCTCGACCCTCGCGCTTTGCGAAGTGTTCGCCAACCCCATTCTTTCTGTGCATA TTATGATTTTGTAGCGACTCTTTCCTTTTATTGTTCAATATTGCTTCCGCTCCTTGGCTA GATGGTGCGAAGTGTTGCTGCTGGTATGAAGGCTGCTGGGAGGAGGATTGGATTGCGAGC CACTCTTTGCGCTGGCTATGGACATCACTTACTTGCCCGATGTCAGAGACGCGACAATGC ACGCTTATGTAGAAACCTAATCGATGAATTCGCATGGC



consensusID : consensus_8726#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 904
fasta sequence
                              [CCTCATCCAGTGCCGACCGCAAGTCCCGCCGTGTCTCGACCGCTTCCATCCCAAAGGGCCGTGGCCTCAGCCCAGAGCGCATCGTTGCCCCCAAGCCCCAGCGACCCCACGAGACCCGCCAAGTTATCAACACGCAGTACGACAAGACCACTTTGGAGGAGCTCAACCGCCGCTTTGCTACCCAAAAGATTGAAGAATCATCCGACGACTCCGACTACAGCTCCGATGAGGACTCAGACGTCCCATCGCTCACCAGCCGCTCGACAAACAGCTCTAGCCCGTCCAGTATCAGCTCTGGCAGCTCATGCTGCACGTGCGAACGCTACGGCATCACCCGCGCTGGTGACCGCGTCAAGCTTGACTGCGGTGGTGCGCGATGCGGATACTCTGATGACTCTTCAGATTGCTCCTCCGAAGACGAGTACGTGTACGAGGAGAAGACCACCCGCCGTCAGGGTGTCGTCATTCGCTCTTAAGAGCCTTCTCTTCTTACCACTTCCCGACTGGACAGCCATTTGTCCCCAGTCTTTTACCGTCACTGCCCTTAAGTGACGGGAACGACTACAATACCTTCTTCCTTCTTTCATGTGCATATTATGATAACAACCTTTTTCTTCCTTTCTTTCACTTCTTCCTATTCCACAGCCGTCGCTAGCCTCGCAAATTTGTATGGCTCCGGCTTTCCACTCACTTATTCTAATTGGATCCGCTTGTTCTTCTTTTTACGACGACATGGCTCATGCTTTTTTTTGCTGCTGGTTTTCCAACTTGGAGACTTGGCGGATGGGACGAAACATGGTCAAGCGAACACAGGCCCATCTTTCCTCGTCTCTTGTACGCTTACGAACTTTAAACACCGGGCGGACAGGCTTATCTTGTCCGTCAACGGAGGAAACATACAACA]

[+] EMBL AK108954             [CCTCATCCAGTGCCGACCGCAAGTCCCGCCGTGTCTCGACCGCTTCCATCCCAAAGGGCCGTGGCCTCAGCCCAGAGCGCATCGTTGCCCCCAAGCCCCAGCGACCCCACGAGACCCGCCAAGTTATCAACACGCAGTACGACAAGACCACTTTGGAGGAGCTCAACCGCCGCTTTGCTACCCAAAAGATTGAAGAATCATCCGACGACTCCGACTACAGCTCCGATGAGGACTCAGACGTCCCATCGCTCACCAGCCGCTCGACAAACAGCTCTAGCCCGTCCAGTATCAGCTCTGGCAGCTCATGCTGCACGTGCGAACGCTACGGCATCACCCGCGCTGGTGACCGCGTCAAGCTTGACTGCGGTGGTGCGCGATGCGGATACTCTGATGACTCTTCAGATTGCTCCTCCGAAGACGAGTACGTGTACGAGGAGAAGACCACCCGCCGTCAGGGTGTCGTCATTCGCTCTTAAGAGCCTTCTCTTCTTACCACTTCCCGACTGGACAGCCATTTGTCCCCAGTCTTTTACCGTCACTGCCCTTAAGTGACGGGAACGACTACAATACCTTCTTCCTTCTTTCATGTGCATATTATGATAACAACCTTTTTCTTCCTTTCTTTCACTTCTTCCTATTCCACAGCCGTCGCTAGCCTCGCAAATTTGTATGGCTCCGGCTTTCCACTCACTTATTCTAATTGGATCCGCTTGTTCTTCTTTTTACGACGACATGGCTCATGCTTTTTTTTGCTGCTGGTTTTCCAACTTGGAGACTTGGCGGATGGGACGAAACATGGTCAAGCGAACACAGGCCCATCTTTCCTCGTCTCTTGTACGCTTACGAACTTTAAACACCGGGCGGACAGGCTTATCTTGTCCGTCAACGGAGGAAACATACAACA]


>consensus_8726#4 CCTCATCCAGTGCCGACCGCAAGTCCCGCCGTGTCTCGACCGCTTCCATCCCAAAGGGCC GTGGCCTCAGCCCAGAGCGCATCGTTGCCCCCAAGCCCCAGCGACCCCACGAGACCCGCC AAGTTATCAACACGCAGTACGACAAGACCACTTTGGAGGAGCTCAACCGCCGCTTTGCTA CCCAAAAGATTGAAGAATCATCCGACGACTCCGACTACAGCTCCGATGAGGACTCAGACG TCCCATCGCTCACCAGCCGCTCGACAAACAGCTCTAGCCCGTCCAGTATCAGCTCTGGCA GCTCATGCTGCACGTGCGAACGCTACGGCATCACCCGCGCTGGTGACCGCGTCAAGCTTG ACTGCGGTGGTGCGCGATGCGGATACTCTGATGACTCTTCAGATTGCTCCTCCGAAGACG AGTACGTGTACGAGGAGAAGACCACCCGCCGTCAGGGTGTCGTCATTCGCTCTTAAGAGC CTTCTCTTCTTACCACTTCCCGACTGGACAGCCATTTGTCCCCAGTCTTTTACCGTCACT GCCCTTAAGTGACGGGAACGACTACAATACCTTCTTCCTTCTTTCATGTGCATATTATGA TAACAACCTTTTTCTTCCTTTCTTTCACTTCTTCCTATTCCACAGCCGTCGCTAGCCTCG CAAATTTGTATGGCTCCGGCTTTCCACTCACTTATTCTAATTGGATCCGCTTGTTCTTCT TTTTACGACGACATGGCTCATGCTTTTTTTTGCTGCTGGTTTTCCAACTTGGAGACTTGG CGGATGGGACGAAACATGGTCAAGCGAACACAGGCCCATCTTTCCTCGTCTCTTGTACGC TTACGAACTTTAAACACCGGGCGGACAGGCTTATCTTGTCCGTCAACGGAGGAAACATAC AACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8726#1      ------------------------------------------------------------
consensus_8726#3      ------------------------------------------------------------
consensus_8726#2      ------------------------------------------------------------
consensus_8726#0      GTCAAGTTCAGAGTTGTTGTGTTCGTTTTTTTGTCTATTCTTTTTTATCCCTCCCCCCTT 60
consensus_8726#4      ------------------------------------------------------------
                                                                                  

consensus_8726#1      ---------------------------------------------------------CCT 3
consensus_8726#3      ------------------------------------------------------------
consensus_8726#2      ------------------------------------------------------------
consensus_8726#0      TCTCATCTCTTACTCTCTCCACAGGCCTGGTGCCATCTAATCACTACACTACCGACGACC 120
consensus_8726#4      ------------------------------------------------------------
                                                                                  

consensus_8726#1      GGTGCCATTATTAATCTACCTTTACCACTAATTCACTTCCACATCCTCGTCGCCGGTCGA 63
consensus_8726#3      ------------------------------------------------------------
consensus_8726#2      ----------------------------------------------TCGTCGCCGGTCGA 14
consensus_8726#0      TTTTCCCCCAAGCCCCCATTTTTTTTTTTAGCAATTATTCAATTCTTTGTGGCCGGTCCA 180
consensus_8726#4      ------------------------------------------------------------
                                                                                  

consensus_8726#1      CAGCCAATCAACGTTAATTTTCAGCTCTACTTGCTCAGTTCAATCTTCACAACCACCACC 123
consensus_8726#3      ------------------------------------------------------------
consensus_8726#2      CACACCACCAAC-CCAACGTTAATTCCAGCTCTACTTGCTCAACACAAACTTCACCAAAT 73
consensus_8726#0      CTCCAACGTAATACGCAGCTCTACTTGCTCGAAACGAACGACCAAAATCATACCGACAAC 240
consensus_8726#4      ------------------------------------------------------------
                                                                                  

consensus_8726#1      AACAACTCGATAATCGCGCAAACTCGCA-TTCTTCACGAATCGCTACAGCTTCTACAGCA 182
consensus_8726#3      ------------ATAGCGCAA-CTCGCA-TTCTTCCCGAATCACCACTGCTTCATCAGCA 46
consensus_8726#2      CAACACTCGATAATCGCGCATACTCGCAATTCTTCACGAATCAACACAGCTTCTTCAGCA 133
consensus_8726#0      GTAACCTCGCACCCCTCAGCGAGACTCTCGACATACACACACTCAACCTCCTCAGCAATC 300
consensus_8726#4      ------------------------------------------------------------
                                                                                  

consensus_8726#1      TTAATTTCGTCTATCCATTAGTTTGGCCCGGACG--AATCGAAAGATCATCGCTATCATA 240
consensus_8726#3      TCG-CTTCGTCTTCCCATTAGCTTGGCCAGGACGATAATTGAAAGAACACCACCATCATA 105
consensus_8726#2      TTA-CTTCGTCTATCCATTAGTTTGGCCAGGACG--AATCGAAAGAATACC---ATCATA 187
consensus_8726#0      TTGACGTCTATCCATTAGTTTGGTACTGGACGAATTGAAAGAAACGAAAAATATCATAAT 360
consensus_8726#4      ------------------------------------------------------------
                                                                                  

consensus_8726#1      TCTCAATCTCTAAAGAAAGAATAATC-ACCACATTCACAATGGCATCAATCCAACTCAAC 299
consensus_8726#3      ATACAATTTCTCACGGAAGAATAACCCACAACACTCGCAATGGCGTCAATCCAGCTCAAC 165
consensus_8726#2      ATTCAACTCTCCAAGAAAGAATAATCAACACACATCACAATGGCCGCTATCCAGCTCAAC 247
consensus_8726#0      ACAAGTCTTTTTACACAGAAAGAAAGAGATAGAATCACAATGGCCGCTATCCAGCTCAAC 420
consensus_8726#4      ------------------------------------------------------------
                                                                                  

consensus_8726#1      TTCACTCTCCGCACTTCCTCCAACTGCAAGACCGTCCATCTTCTCGGCTCATGGGACGGC 359
consensus_8726#3      TTCACGCTCCGCACTTCGGCAAACTGCAAAACCGTCCATCTCCTTGGTTCATGGGACGGC 225
consensus_8726#2      TTCACTCTCCGCACTTCCGCCAACTGCAAGACCGTCCACCTTCTCGGCTCCTGGGACGGC 307
consensus_8726#0      TTTACTCTCCGCACTTCCTCCAACTGCAAGACAGTCCACCTTCTCGGTTCCTGGGATGGC 480
consensus_8726#4      ------------------------------------------------------------
                                                                                  

consensus_8726#1      TACCAGGGACAACTCCCACTCTCCAAGGACCCCAAGAAGTCCGGCGGCTGGAACGGATGC 419
consensus_8726#3      TACCAGGGACAACTCCCACTCTCCAAGGACCCCAAGAAGTCAGGAGGCTGGACAGGATGC 285
consensus_8726#2      TACCAGGGTCAGCTCCCACTCTCCAAGGACACCAAGAAGTCTGGAGGCTGGACTGGCTGC 367
consensus_8726#0      TATCAAGGTCAGCTCCCGCTTTCCAAGGATCCCAAGAAGTCAGGTGGCTGGGTCGGATGC 540
consensus_8726#4      ------------------------------------------------------------
                                                                                  

consensus_8726#1      TTCAAGTTCAATGGTGCCACTCTTCAACAAGGCCAGCGCTACTGGTACTACTACATCATT 479
consensus_8726#3      TTCAAGTTCAACGGCGCCACACTCCAACAGGGCCAGCGCTACTGGTACTACTACATCATC 345
consensus_8726#2      TTCAAGTTCAACGGCGCCACTCTCAAGCAGGGCCAACGTTACTGGTACTACTACATCATC 427
consensus_8726#0      TTCAAGTTCCAAGGACAGACTTTGAAGCAAGGTCAGCGATACTGGTACTACTACATCATC 600
consensus_8726#4      ------------------------------------------------------------
                                                                                  

consensus_8726#1      GACGGCTACCACGTTTCCCACGACCCCGCTAAGGACCACACTACCGAGCCCACTACCGGC 539
consensus_8726#3      GACGGCTACCACGTCTCGCACGACCCGGCAAAGGACCACACAACTGAGCCAACCACCGGC 405
consensus_8726#2      GACGGCTACCACGTCTCGCACGACCCCGCCAAGGACCACACCACCGAGCCCACCACCGGC 487
consensus_8726#0      GACGGCTACCATGTCTCGCACGACCCCGCCAAGGACCACACGACTGAACCCACCACTGGT 660
consensus_8726#4      ------------------------------------------------------------
                                                                                  

consensus_8726#1      CGCAAGCTCAACATCATCGACATCCCAGCTGCAAAGTCATC---CTCAAAAAGCTCAAGC 596
consensus_8726#3      CGCAAGCTCAACATCATTGACATCCCCGCCGCCAAGTCGTCGCACGCAAAGACCTCAAGC 465
consensus_8726#2      CGCAAGCTCAACATCATCGACATCCCCGCCGCCAAGTCATCG------------TCGACC 535
consensus_8726#0      CGCAAGCTCAACATCATCGACATCCCCGCTGCCAAGTCAAGCTCAAAGTCATCCTCATCC 720
consensus_8726#4      ----------------------------------------------------CCTCATCC 8
                                                                            **   *

consensus_8726#1      ---TCCGACCGCAAG---TCCCGCCGCGTCTCAACCG---------CCTCCATTCCAAAG 641
consensus_8726#3      AGCGCCGACCGCAAAGCTTCCCGTCGCATCTCCACCGCGTCCGCCGCATCCGTCGCAAAG 525
consensus_8726#2      AGCTCCGACCGCAAG---TCTCGCCGCGTCTCCGCCA------------ACATCGCCAAG 580
consensus_8726#0      AGTGCCGACCGCAAG---ACCCGCCGTGTCTCAACTG---------CTTCCATCCCAAAG 768
consensus_8726#4      AGTGCCGACCGCAAG---TCCCGCCGTGTCTCGACCG---------CTTCCATCCCAAAG 56
                          **********     * ** **  ****  *               * *  * ***

consensus_8726#1      GGCCGTGGCGTCTCTCCCGAGCGCATCGTCGCACCCAAGCCCCAGCGCCCAGGCCAGACC 701
consensus_8726#3      GGCCGCGCACTCAGCCCAGAGCGCATCGTCGCGCCAGCACCACAACGACCCGGCCAGACA 585
consensus_8726#2      GGCCGTTCCCTCAGCCCCGAGCGCATCGTTGCCCCCAAGCCCCAGCGCCCAGGTGAGACC 640
consensus_8726#0      GGTCGCGGCCTCAGTCCAGAGCGCATCGTTGCCCCTAAGCCCCAACGGCCCAACGAGACG 828
consensus_8726#4      GGCCGTGGCCTCAGCCCAGAGCGCATCGTTGCCCCCAAGCCCCAGCGACCCCACGAGACC 116
                      ** **     **   ** *********** ** **    ** ** ** **     **** 

consensus_8726#1      CGACAAGTCATCAACACCCAGTACGACAAGACCACCCTTGAGGAGCTCAACCGCCGCTTT 761
consensus_8726#3      CGACAAGTCATCAACACCCAGTACGACAAGACCACACTCGAGGAGCTCAACCGACGCTTC 645
consensus_8726#2      CGCCAGGTCATCAACACCCAGTACGACAAGACCACCCTCGAGGAGCTCAACCGCCGCTTT 700
consensus_8726#0      CGCCAAGTCATCAACACCCAGTACGACAAGACCACCTTGGAAGAACTCAATCGCCGCTTC 888
consensus_8726#4      CGCCAAGTTATCAACACGCAGTACGACAAGACCACTTTGGAGGAGCTCAACCGCCGCTTT 176
                      ** ** ** ******** *****************  * ** ** ***** ** ***** 

consensus_8726#1      GCCAAGCAGTCCATGGAGGAATCTTCTGATGAAGAGGATGACGACTCCGAATATGACTCC 821
consensus_8726#3      GCCCAACAGACCGTCGAAGACTCCTCCGACTCCGAGTA---CGACTCCGA---CGACTCT 699
consensus_8726#2      GCTGCCCAGTCCGTCGAGGA------CGACTCTGAGGA---TGACTCCGA------CTAC 745
consensus_8726#0      GCCACTCAAAAGATTGAAGAGTCATCAGACGACTCCGAATACAGCTCCGA------TGAG 942
consensus_8726#4      GCTACCCAAAAGATTGAAGAATCATCCGACGACTCCGACTACAGCTCCGA------TGAG 230
                      **    **     * ** **       **        *      ******          

consensus_8726#1      GGCTCCGATGTCCCATCCCTCACCTCCCGCTCCAC---CAACTCGAGCTCGCCCAGCAGC 878
consensus_8726#3      GGCTCCGACGTCCCATCGCTCACGTCCCGCTCCAC---CAACTCAAGCTCGCCCAGCAGC 756
consensus_8726#2      GACTCCGATGTCCCATCGCTTACCTCTCGCTCCAC---CAACTCGAGCTCGCCCAGCAGT 802
consensus_8726#0      GACTCAGACGTCCCATCGCTCACCAGCCGCTCGACAAACAGCTCTAGTCCGTCCAGTA-- 1000
consensus_8726#4      GACTCAGACGTCCCATCGCTCACCAGCCGCTCGACAAACAGCTCTAGCCCGTCCAGTA-- 288
                      * *** ** ******** ** **    ***** **   ** *** **  ** **** *  

consensus_8726#1      ATCAGCTCTGGCAGCAGCTGCTGCACATGCGAGCGCTTTGGCATCACCCGCTCTGGTGAT 938
consensus_8726#3      GTCAGCTCTGGCAGCAGCTGCTGCACATGCGAGCGCTTTGGCATCACGCGCTCCGGCGAC 816
consensus_8726#2      GTCAGCTCTGGTAGCAGCTGCTGCACATGCGAGCGCTTTGGCATTACCCGCGCCGGTAAC 862
consensus_8726#0      -TCAGCTCTGGCAGCTCATGCTGCACGTGCGAACGCTACGGCATCACCCGCACTGGTGAC 1059
consensus_8726#4      -TCAGCTCTGGCAGCTCATGCTGCACGTGCGAACGCTACGGCATCACCCGCGCTGGTGAC 347
                       ********** ***   ******** ***** ****  ***** ** *** * **  * 

consensus_8726#1      CGTGTCAAGCTCGACTGCGGAGGTGCGCGATGCGGATACTCTGATGACTCATCAGATTGC 998
consensus_8726#3      CGTGTCAAGCTCGACTGCGGAGGAGCGCGATGCGGATACTCGGACGACTCTGAGAGCTGC 876
consensus_8726#2      CGCGTCAAGCTTGACTGCGGAGGTTCGCGATGCGGATACTCTGACGACTCGGAGGACTGC 922
consensus_8726#0      CGCGTCAAACTTGACTGCGGTGGTGCACGCTGTGGATACTCTGATGATTCTTCCGAATGC 1119
consensus_8726#4      CGCGTCAAGCTTGACTGCGGTGGTGCGCGATGCGGATACTCTGATGACTCTTCAGATTGC 407
                      ** ***** ** ******** **  * ** ** ******** ** ** **       ***

consensus_8726#1      TCATCTGAGGACGAGTACGTGTACGAAGAGAAGACGACCCGCCGCCAGGGCGTCGTCATC 1058
consensus_8726#3      TCGTCGGAAGACGAGTACGTGTACGAGGAGAAGACAACACGCCGCCAGGGCGTCGTCATC 936
consensus_8726#2      TCTTCTGAGGACGAGTACGTGTACGAGGAGAAGACGACCCGCCGCCAGGGCATCGTCGTC 982
consensus_8726#0      TCATCCGAGGACGAGTACGTGTACGAGGAGAAGACCACCCGCCGCCAAGGTGTTGTCATA 1179
consensus_8726#4      TCCTCCGAAGACGAGTACGTGTACGAGGAGAAGACCACCCGCCGTCAGGGTGTCGTCATT 467
                      ** ** ** ***************** ******** ** ***** ** **  * *** * 

consensus_8726#1      CGCTCCTAGA----------TGTGCAACTTCGACATCAGGACCTCA-----TCATCGTGA 1103
consensus_8726#3      CGCGCTTAAG----------TGTCCGGA--CAACATC-------CA-----TCGGCTCGA 972
consensus_8726#2      CGCTCGTAGA----------TTGCCTACC-CAACTCA----CCTCA-----CTGTCAACA 1022
consensus_8726#0      CGCGCTTAAGAACGCCTTCTCTTCCTACCGCTTCACCCTCTGGACAGCCATTTGTGCCGT 1239
consensus_8726#4      CGCTCTTAAGA--GCCTTCTCTTCTTACCACTTC-CCGACTGGACAGCCATTTGTCCCCA 524
                      *** * **                      *  *          **              

consensus_8726#1      ATTCAACATGTCT----------GTCGCATTCGC-----C-CTTGCGCTTGCGT--CGAC 1145
consensus_8726#3      -----------CC----------CTCGCGCTTTG-----C-GAAGTGTTCGC----CAAC 1001
consensus_8726#2      ATTGCTTAC-CCC----------ACCTTGGACAC-----C-ATTGTGTTTCC-----CAC 1060
consensus_8726#0      GTCTTTTTTTTTCTGTTCGCCTACCCTCGTGCGACAGACCGAAGACGACCACCTACCTTT 1299
consensus_8726#4      GTCTTTTACCGTC------ACTGCCCTTAAGTGA-----CGGGAACGACTACAATACCTT 573
                                               *             *      *    *        

consensus_8726#1      CCTCTTTCTTTC-TGTGCATATTATGATAACGACTTTTTTCTTTCCTACT-CTGTTCGAC 1203
consensus_8726#3      CC-CATTCTTTC-TGTGCATATTATGATTTTGTAGCGACTCTTTCCTTTTATTGTTCAAT 1059
consensus_8726#2      ACCCATTCTTTC-TGTGCATATTATGATTACGAC---ATTTTTTCCTTTT-CGTTCTTAC 1115
consensus_8726#0      CTTCCTTCTTTCATGTGCATATTATGATAACGACAC-TTTTTTTTTCTCT---TTCTTTT 1355
consensus_8726#4      CTTCCTTCTTTCATGTGCATATTATGATAACAAC----CTTTTTCTTCCT---TTCTTTC 626
                         * ******* ***************           * ***     *    *     

consensus_8726#1      AAATGTATCCATTCATTGGTAGATATGACTTTCTTGCTGCTGGTATTGTTGCCGTTAGAG 1263
consensus_8726#3      AT-TGCTTCCGCTCCTTGGCTAG-ATGG------TGCGA--AGTGTTGCTGCTGGTATGA 1109
consensus_8726#2      AACAAGATCCGCTCTTTGGATATGATTA-TTTATTGCTGCTGGTATGGAGGTC--CTGGA 1172
consensus_8726#0      ACTTCTTCTTATACCACAGCCGTCGCTA--GCCTCGCACCTTTGAGAGACTCCGGCTTTC 1413
consensus_8726#4      ACTTCTTCCTATTCCACAGCCGTCGCTA--GCCTCGCAAATTTGTATGGCTCCGGCTTTC 684
                      *            *    *                **          *            

consensus_8726#1      ATTTTACTCTGGGGAGGAATACA---GCGAGCCACTCTTTTTGCGCTGGCTACGGACATC 1320
consensus_8726#3      AGGCTGCTGGGAGGAGGATTGGAT-TGCGAGCCACTCTTT--GCGCTGGCTATGGACATC 1166
consensus_8726#2      GGTTTACTCAGGGGAAGGATACA---GCGAGCCACTCTTTTTGCGCTGGCTATGGACATC 1229
consensus_8726#0      CACTCACTTATTCTA--ATTGGATCTGCTT----TTTTAATAACGACGACATGCGACATG 1467
consensus_8726#4      CACTCACTTATTCTA--ATTGGATCCGCTTGTTCTTCTTTTTACGACGACATGGCTCATG 742
                            **      *    *  *   **       * *     **  * *      *** 

consensus_8726#1      ACATTATGTG----CCCGATGT------CTTC--ATGCGACAATGC-----ACGCTCATG 1363
consensus_8726#3      AC-TTACTTG----CCCGATGT------CAGAG-ACGCGACAATGC-----ACGCTTATG 1209
consensus_8726#2      AC-TTAT-TG----CCCGATGT------CAGATCATGCGACAATGC-----ACGCTCATG 1272
consensus_8726#0      CTTTGTTTTCTGTTGCTGCTGGAATTTTCCCCCAACTCGAGAGTTGGGAGGGGGCGGATG 1527
consensus_8726#4      CTTTTTTTT-----GCTGCTGG-----TTTTCCAACTTGGAGACT------TGGCGGATG 786
                         *    *      * * **             *   *              **  ***

consensus_8726#1      TAGAACCATGTATAAACAAATTAA-CGAATTCGCATGGCT-------------------- 1402
consensus_8726#3      TAGAAACCT---------AATCGA-TGAATTCGCATGGC--------------------- 1238
consensus_8726#2      TAGAATTAGAT-----CTAATCAAATGGATTCGCATGGC--------------------- 1306
consensus_8726#0      GGAAGGAAAACATGGAACAAGCGAACACGCCCTCCTCCTATCTTACCCTCTCTCCCTCTC 1587
consensus_8726#4      GGACG--AAACATGGT-CAAGCGAACACAGGCCCAT-----------------------C 820
                                        **   *       * * *                        

consensus_8726#1      ------------------------------------------------------------
consensus_8726#3      ------------------------------------------------------------
consensus_8726#2      ------------------------------------------------------------
consensus_8726#0      TTTCCCTCACTCTTGCACGCTTACGAACTCTTAAACACCGGGCGGAAAAGCTTGTCTTGT 1647
consensus_8726#4      TTTCCTCGTCTCTTGTACGCTTACGAACT-TTAAACACCGGGCGGACAGGCTTATCTTGT 879
                                                                                  

consensus_8726#1      ------------------------------------------------------------
consensus_8726#3      ------------------------------------------------------------
consensus_8726#2      ------------------------------------------------------------
consensus_8726#0      TCCGCGTCGG-GAAAGCAAAGAAAAAAACATTCTAGATATGTTTTTGCTAAATGTGCCAA 1706
consensus_8726#4      CCGTCAACGGAGGAAACATACAACA----------------------------------- 904
                                                                                  

consensus_8726#1      ---------------------------------------------
consensus_8726#3      ---------------------------------------------
consensus_8726#2      ---------------------------------------------
consensus_8726#0      TCTGCACGCCTCATGTAGGTTTTATACTCTGCTCGAATACCAATG 1751
consensus_8726#4      ---------------------------------------------
                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)