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Oryza sativa
cluster # 8743 cluster # 8743       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8743#0 length = 1124 sequences # 5  

consensusID : consensus_8743#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1124
fasta sequence
                              [AACCCAAACCGAGCGCAGC-GCACGGACCGAGATCTGCGCCCGGCAGCGGCGGCGAACTCCGGTGAACCAACCATGGCCGTGGACCTGATGGGCTGCTACGCCCCGCGCCGCGCAGACGACCAGCTCGCCATCCAGGAGGCGGCCACCGCCGG-CCTCCGCAGCCTGGAGATGCTCGTGTCGTCCCTCTCCTCCTCCTCTCAGGCCGCCGGGGCTCACAAGGCCTCGCCGCAGCAGCAGCCGTTCGGCGAGATCGCCGACCAGGCCGTCTCCAAGTTCCGCAAGGTCATCTCCATCCTCGACCGCACCGGCCACGCCCGCTTCCGCCGCGGCCCGGTCGAGTCGTCTGCTCCCGCCGCCCCCGTCGCTGCTGCTCCCCCTCCTCCTCCTCCACCACCGGCGCCGGTCGCTGCCGCCCTCGCGCCGACCTCCTCGCAGCCGCAGACCCTGACGCTGGACTTCACGAAGCCGAACCTGACCATGTCGGCCGCGACGTCCGTGACATCCACGTCGTTCTTCTCGTCGGTGACGGCCGGCGAGGGAAGCGTTTCCAAGGGCCGGAGCCTGCTCTCCTCCGGCAAGCCGCCGCTGTCTGGGCACAAGCGGAAGCCCTGCGCCGGCGGCCACTCCGAGGCCACCGCCAACGGCGGCCGCTGCCACTGCTCCAAGAGAAGGAAGAACCGGGTGAAGAGGACGATCCGAGTGCCGGCAATCAGCTCGAAGATCGCCGACATCCCGCCGGACGAATACTCGTGGAGGAAGTACGGCCAGAAACCCATCAAGGGCTCCCCTTACCCACGGGGCTACTACAAGTGCAGCACAGTGAGAGGATGCCCCGCGCGGAAGCACGTGGAGCGCGCCACCGACGACCCGGCGATGCTGGTCGTGACCTACGAGGGCGAGCACCGCCACACGCCGGGGCCCCTCCCGGCGCCACCCGCCGCCGCCGCCGTCGCCGCGATGCCGGTGTCCGTCGCCGTGTCCACCGGCAACGGACATGTCTAACCTAATTAGCTCCATAATTTTTTTCTTCTTTTTTTTTTTAGTTGCTTCTCATCAATCTAATGATGCGTGTAAAGAAGAAAAGATTGTAGAAAGAGGACGAGGGAAACTTGATGCTAGAGAAT]

[+] EMBL AK072938             [AACCCAAACCGAGCGCAGC GCACGGACCGAGATCTGCGCCCGGCAGCGGCGGCGAACTCCGGTGAACCAACCATGGCCGTGGACCTGATGGGCTGCTACGCCCCGCGCCGCGCAGACGACCAGCTCGCCATCCAGGAGGCGGCCACCGCCGG CCTCCGCAGCCTGGAGATGCTCGTGTCGTCCCTCTCCTCCTCCTCTCAGGCCGCCGGGGCTCACAAGGCCTCGCCGCAGCAGCAGCCGTTCGGCGAGATCGCCGACCAGGCCGTCTCCAAGTTCCGCAAGGTCATCTCCATCCTCGACCGCACCGGCCACGCCCGCTTCCGCCGCGGCCCGGTCGAGTCGTCTGCTCCCGCCGCCCCCGTCGCTGCTGCTCCCCCTCCTCCTCCTCCACCACCGGCGCCGGTCGCTGCCGCCCTCGCGCCGACCTCCTCGCAGCCGCAGACCCTGACGCTGGACTTCACGAAGCCGAACCTGACCATGTCGGCCGCGACGTCCGTGACATCCACGTCGTTCTTCTCGTCGGTGACGGCCGGCGAGGGAAGCGTTTCCAAGGGCCGGAGCCTGCTCTCCTCCGGCAAGCCGCCGCTGTCTGGGCACAAGCGGAAGCCCTGCGCCGGCGGCCACTCCGAGGCCACCGCCAACGGCGGCCGCTGCCACTGCTCCAAGAGAAGGAAGAACCGGGTGAAGAGGACGATCCGAGTGCCGGCAATCAGCTCGAAGATCGCCGACATCCCGCCGGACGAATACTCGTGGAGGAAGTACGGCCAGAAACCCATCAAGGGCTCCCCTTACCCACGGGGCTACTACAAGTGCAGCACAGTGAGAGGATGCCCCGCGCGGAAGCACGTGGAGCGCGCCACCGACGACCCGGCGATGCTGGTCGTGACCTACGAGGGCGAGCACCGCCACACGCCGGGGCCCCTCCCGGCGCCACCCGCCGCCGCCGCCGTCGCCGCGATGCCGGTGTCCGTCGCCGTGTCCACCGGCAACGGACATGTCTAACCTAATTAGCTCCATAATTTTTTTCTTC CTTTTTTTTTAGTTGCTTCTCATCAATCTAATGATGCGTGTAAAGAAGAAAAGATTGTAGAAAGAGGACGAGGGAAACTTGATGCTAGAGAAT]
[+] EMBL AK061266             [ ACCCAAACCGAGCGCAGC GCACGGACCGAGATCTGCGCCCGGCAGCGGCGGCGAACTCCGGTGAACCAACCATGGCCGTGGACCTGATGGGCTGCTACGCCCCGCGCCGCGCAGACGACCAGCTCGCCATCCAGGAGGCGGCCACCGCCGG CCTCCGCAGCCTGGAGATGCTCGTGTCGTCCCTCTCCTCCTCCTCTCAGGCCGCCGGGGCTCACAAGGCCTCGCCGCAGCAGCAGCCGTTCGGCGAGATCGCCGACCAGGCCGTCTCCAAGTTCCGCAAGGTCATCTCCATCCTCGACCGCACCGGCCACGCCCGCTTCCGCCGCGGCCCGGTCGAGTCGTCTGCTCCCGCCGCCCCCGTCGCTGCTGCTCCCCCTCCTCCTCCTCCACCACCGGCGCCGGTCGCTGCCGCCCTCGCGCCGACCTCCTCGCAGCCGCAGACCCTGACGCTGGACTTCACGAAGCCGAACCTGACCATGTCGGCCGCGACGTCCGTGACATCCACGTCGTTCTTCTCGTCGGTGACGGCCGGCGAGGGAAGCGTTTCCAAGGGCCGGAGCCTGCTCTCCTCCGGCAAGCCGCCGCTGTCTGGGCACAAGCGGAAGCCCTGCGCCGGCGGCCACTCCGAGGCCACCGCCAACGGCGGCCGCTGCCACTGCTCCAAGAGAAGGAAGAACCGGGTGAAGAGGACGATCCGAGTGCCGGCAATCAGCTCGAAGATCGCCGACATCCCGCCGGACGAATACTCGTGGAGGAAGTACGGCCAGAAACCCATCAAGGGCTCCCCTTACCCACGGGGCTACTACAAGTGCAGCACAGTGAGAGGATGCCCCGCGCGGAAGCACGTGGAGCGCGCCACCGACGACCCGGCGATGCTGGTCGTGACCTACGAGGGCGAGCACCGCCACACGCCGGGGCCCCTCCCGGCGCCACCCGCCGCCGCCGCCGTCGCCGCGATGCCGGTGTCCGTCGCCGTGTCCACCGGCAACGGACATGTCTAACCTAATTAGCTCCATAATTTTTTTCTTCTTTTTTTTTTTAGTTGCTTCTCATCAATCTAATGATGCGTGTAAAGAAGAAAAGATTGTAGAAAGAGGACGAGGGAAACTTGATGCTAGAGAAT]
[+] EMBL OSC25241             [           AGCGCAGCAGC GGGACCGAGATCTGCGCCCGGCAGCGGCGGCGAACTCCGGTGAACCAACCATGGCCGTGGACCTGATGGGCTGCTACGCCCCGCGCCGCGCAGACGACCAGCTCGCCATCCAGGAGGCGGCCACCG CGN CNTCCGCAGCCTGGAGATGCTCGTTTNGTCCCTCTCCTNCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU069036             [                                  CTNCGCCCGGCAGCGGCGGCGAACTCCGGTGAACCAACCATNGCCGTGGACCTGATNGGCTGCTACNCCCCGCGCCGCGCAGACGACCAGCTCGCCATCCAGGAGGCGGCCACCGCCGGNCCTCCGCAGCCTGGAGATNCTCGTNTCGTCCCTCTCCTCCTCCTCTCANGCCGCCGGGGCTCACAAGGCCTCGCCGCAGCAGCAGCCGTTCGGCGAGATCNCCGACCAGNCCGTCTCCAAGTTCCGCAAGGTCATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB967252             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTGCTCCAAGAGAAGGAAGAACCGGGTGAAGAGGACGATCCGAGTGCCGGCAATCAGCTCGAAGATCGCCGACATCCCGCCGGACGAATACTCGTGGAGGAAGTACGGCCAGAAACCCATCAAGGGCTCCCCATATCCACGGGGCTACTACAAGTGTAGCACAGTGAGAGGATGCCCCGCGCGGAAGCACGTGGAGCGCGCCACCGACGACCCGGCGATGCTGGTCGTGACCTACGAGGGCGAGCACCGCCACACGCCGGGACCCCTCCCGGCGCCACCCGCCGCCGCCGCCGTCGCCGCGATGCCGGTGTCCGTCGCCGTGTCCACCGGCAACGGACATGTCTAACCTAATTAGCTCCATAATTTTTTT TTTTTTTTTTTTTTAGTTGCTTCTCATCAATCTAATGATGCGTGTAAAGAAGAAAAGATTGTAGAAAGAGGACGAG                     ]


>consensus_8743#0 AACCCAAACCGAGCGCAGCGCACGGACCGAGATCTGCGCCCGGCAGCGGCGGCGAACTCC GGTGAACCAACCATGGCCGTGGACCTGATGGGCTGCTACGCCCCGCGCCGCGCAGACGAC CAGCTCGCCATCCAGGAGGCGGCCACCGCCGGCCTCCGCAGCCTGGAGATGCTCGTGTCG TCCCTCTCCTCCTCCTCTCAGGCCGCCGGGGCTCACAAGGCCTCGCCGCAGCAGCAGCCG TTCGGCGAGATCGCCGACCAGGCCGTCTCCAAGTTCCGCAAGGTCATCTCCATCCTCGAC CGCACCGGCCACGCCCGCTTCCGCCGCGGCCCGGTCGAGTCGTCTGCTCCCGCCGCCCCC GTCGCTGCTGCTCCCCCTCCTCCTCCTCCACCACCGGCGCCGGTCGCTGCCGCCCTCGCG CCGACCTCCTCGCAGCCGCAGACCCTGACGCTGGACTTCACGAAGCCGAACCTGACCATG TCGGCCGCGACGTCCGTGACATCCACGTCGTTCTTCTCGTCGGTGACGGCCGGCGAGGGA AGCGTTTCCAAGGGCCGGAGCCTGCTCTCCTCCGGCAAGCCGCCGCTGTCTGGGCACAAG CGGAAGCCCTGCGCCGGCGGCCACTCCGAGGCCACCGCCAACGGCGGCCGCTGCCACTGC TCCAAGAGAAGGAAGAACCGGGTGAAGAGGACGATCCGAGTGCCGGCAATCAGCTCGAAG ATCGCCGACATCCCGCCGGACGAATACTCGTGGAGGAAGTACGGCCAGAAACCCATCAAG GGCTCCCCTTACCCACGGGGCTACTACAAGTGCAGCACAGTGAGAGGATGCCCCGCGCGG AAGCACGTGGAGCGCGCCACCGACGACCCGGCGATGCTGGTCGTGACCTACGAGGGCGAG CACCGCCACACGCCGGGGCCCCTCCCGGCGCCACCCGCCGCCGCCGCCGTCGCCGCGATG CCGGTGTCCGTCGCCGTGTCCACCGGCAACGGACATGTCTAACCTAATTAGCTCCATAAT TTTTTTCTTCTTTTTTTTTTTAGTTGCTTCTCATCAATCTAATGATGCGTGTAAAGAAGA AAAGATTGTAGAAAGAGGACGAGGGAAACTTGATGCTAGAGAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)