These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8769#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2263 fasta sequence [GCCTTCTCCGTCCGTCGCGTTGCTCCGGTGCTCGATCGGTCTCCCCGCCCGGCCGCCAGACGACGCGCCACATATGAAGCCCCGCTCCTCGCGCGACGGCCATAATGCCGCCGCCGCCGCCGCGCTCCTCCTCGCGGCGCTGGTCCTCTCCGGCGACGTCCTGCCGGCGGTCGTGGCCGGTGGCGCCCCCTCGTTCAACTACAAGGACGCGCTCACCAAGTCCATCATGTTCCTCGAGGCGCAGCGCTCCGGCAAGCTGCCGCCCACCAACCGCATCAAGTGGCGCGGCGACTCCGGCATGGAAGACGGCAAGCTCGCCAACGTGGACCTGAC-TGGCGGGTACTACGACGCCGGCGACAACGTGAAGTACGGGCTGCCGCTGGCGTTCACGGTGACGACGCTGGCGTGGACGGCGATGGCGTTCGAGAAGGAGCTGAAGGCGGCGAGGGAGCTGGAGAACGTGCACGCGGCCATCAGGTGGGGCACCGACTACTTCCTCAAGGCGGCGACCAAGAAGGACCACCTGTGGGTGCAGGTCGGCGACCCCAACGCCGACCACCAGTGCTGGGTCCGCCCGGAGAACATGCCCACGCCCCGCACCCTCTACCAGATCAACGACAAGACCCCCGGCTCCGAGATTGCCGCCGAGACCGCCGCCGCCATGACCGCCTCCTCCATGGTCTTCCGCAAGGATAAGCCCTACTCCCGCCGCCTCCTCAACAAGGCCAAGCTGCTGTTCCAGTTCGCCAAGACGCACCAGGGAACCTACGACGGCGAGTGCCCCTTCTACTGCTCCTACTCCGGCTACAACGATGAGTTGCTGTGGGCGGCGACGTGGCTGTACCTGGCGACGAAGAGGCAGGTGTACGCGGACTTCATCGGGCACGAGGCGATCTCGTCGAGCGTGGCCGAGTTCAGCTGGGACCTCAAGTTCCCGGGCGCGCAGGTGCTCCTCGCGGAGCTCAACATGACATCCAGCGGCGGCCTCCAGAGCTTCAAGTCCCAGGCCGACAACTTCGTGTGCGCCGTGCTCCCGGACACCCCGTTCCACCAGGTGTCCATCACCCCGGGCGGCATGATCCACCTCCGCGACGGCGCCAACTCCCAGTACGTCACCAGCACGGCCTTCCTCTTCGTCGCCTACAGCGACATCCTCCGCCGGATCAACCAGCCGGTGATGTGCGGCGCCCAGGCCGTGCAGCCCGCCCGCCTCCTCCAGTTCGCCAAGCAGCAGATCGACTACCTCCTCGGCGCCAACCCGCGCGGCCGCTCCTACGTCGTCGGCTTCGGCGTCAACCCGCCCACGCAGCCGCACCACCGCGGCGCCTCCACCCCGGTGCTCCCCCCGGGCTACCAGGTCAACTGCGGGATGAGCTTCAGCGAGTGGTTCACCCCCGACCGGCCCAACCCCAACGAGCTCACCGGCGCGATCATGGGCGGCCCCGACGGCGGCGACAACTTCTCCGACAAGCGTGGCAACTCGTCCTGCACCGAGCCTTGCACGTACATCAACTCCCTCTCCATTGGCCCCCTCGCCGCCCTCGCCATCCGTGGCCCAAACCTCATCGCCACCCAGTAATTAATCACCATTATTATACACTGATTAATTACTGCTAAATTAACTAAAGATATTGAGTATATTACTATATTACTCCTCCTCCCCTGTATTAAATCTCGACGATATATACAAATTAATTTGTTGATTAATCGGAATCGAAATTAGAGCTGATGCATGCATGGACACGTGAGGTGATCGATCGGGCACACGATCGATCGATGACACGAACGAACAATTAATAACGCGAGAAAGGGCTCGCGCGAGTTGTTGGGGTAGGTCTCGGCTGGTCGTTAGGTTGGCCAGCTTATTTCTCGTTGCACGCACGCACGCACGTACGTACGCAGGCGCGCGCAACCGTGTGTAAGTGCGTGTGTGATGGATCGATCAACCGAGCGGCGCGCACGGGCGAATACGAACTTTTCCAAGTGATGAAGTGATCACGTATACACGTAGTACAGCAGCCGAGCTTTTCGGTGAGCGTGTACGACGTGTTTTTTTCATTGGACCGAACATAAAACATGTCAAGTACGTACGTGGTACGTTTGGTTAATGCATAAATGTATTTGTGGTTCTTCAAATCCCGTGCTCAGGTATGAATTAATTAATCTAGCTAGCTATATGGTGTACTATCTTGTACGAAGAAGAACATCTCTGATGCTGTATATCTTTGTGATGTATACTACACGCACAATAAATTATCTAGTT] [+] EMBL AK100098 [GCCTTCTCCGTCCGTCGCGTTGCTCCGGTGCTCGATCGGTCTCCCCGCCCGGCCGCCAGACGACGCGCCACATATGAAGCCCCGCTCCTCGCGCGACGGCCATAATGCCGCCGCCGCCGCCGCGCTCCTCCTCGCGGCGCTGGTCCTCTCCGGCGACGTCCTGCCGGCGGTCGTGGCCGGTGGCGCCCCCTCGTTCAACTACAAGGACGCGCTCACCAAGTCCATCATGTTCCTCGAGGCGCAGCGCTCCGGCAAGCTGCCGCCCACCAACCGCATCAAGTGGCGCGGCGACTCCGGCATGGAAGACGGCAAGCTCGCCAACGTGGACCTGAC TGGCGGGTACTACGACGCCGGCGACAACGTGAAGTACGGGCTGCCGCTGGCGTTCACGGTGACGACGCTGGCGTGGACGGCGATGGCGTTCGAGAAGGAGCTGAAGGCGGCGAGGGAGCTGGAGAACGTGCACGCGGCCATCAGGTGGGGCACCGACTACTTCCTCAAGGCGGCGACCAAGAAGGACCACCTGTGGGTGCAGGTCGGCGACCCCAACGCCGACCACCAGTGCTGGGTCCGCCCGGAGAACATGCCCACGCCCCGCACCCTCTACCAGATCAACGACAAGACCCCCGGCTCCGAGATTGCCGCCGAGACCGCCGCCGCCATGACCGCCTCCTCCATGGTCTTCCGCAAGGATAAGCCCTACTCCCGCCGCCTCCTCAACAAGGCCAAGCTGCTGTTCCAGTTCGCCAAGACGCACCAGGGAACCTACGACGGCGAGTGCCCCTTCTACTGCTCCTACTCCGGCTACAACGATGAGTTGCTGTGGGCGGCGACGTGGCTGTACCTGGCGACGAAGAGGCAGGTGTACGCGGACTTCATCGGGCACGAGGCGATCTCGTCGAGCGTGGCCGAGTTCAGCTGGGACCTCAAGTTCCCGGGCGCGCAGGTGCTCCTCGCGGAGCTCAACATGACATCCAGCGGCGGCCTCCAGAGCTTCAAGTCCCAGGCCGACAACTTCGTGTGCGCCGTGCTCCCGGACACCCCGTTCCACCAGGTGTCCATCACCCCGGGCGGCATGATCCACCTCCGCGACGGCGCCAACTCCCAGTACGTCACCAGCACGGCCTTCCTCTTCGTCGCCTACAGCGACATCCTCCGCCGGATCAACCAGCCGGTGATGTGCGGCGCCCAGGCCGTGCAGCCCGCCCGCCTCCTCCAGTTCGCCAAGCAGCAGATCGACTACCTCCTCGGCGCCAACCCGCGCGGCCGCTCCTACGTCGTCGGCTTCGGCGTCAACCCGCCCACGCAGCCGCACCACCGCGGCGCCTCCACCCCGGTGCTCCCCCCGGGCTACCAGGTCAACTGCGGGATGAGCTTCAGCGAGTGGTTCACCCCCGACCGGCCCAACCCCAACGAGCTCACCGGCGCGATCATGGGCGGCCCCGACGGCGGCGACAACTTCTCCGACAAGCGTGGCAACTCGTCCTGCACCGAGCCTTGCACGTACATCAACTCCCTCTCCATTGGCCCCCTCGCCGCCCTCGCCATCCGTGGCCCAAACCCCATCGCCACCCAGTAATTAATCACCATTATTATACACTGATTAATTACTGCTAAATTAACTAAAGATATTGAGTATATTACTATATTACTCCTCCTCCCCTGTATTAAATCTCGACGATATATACAAATTAATTTGTTGATTAATCGGAATCGAA ] [+] EMBL AK106971 [ TCCGTCCGTCGCGTTGCTCCGGTGCTCGATCGGTCTCCCCGCCCGGCCGCCAGACGACGCGCCACATATGAAGCCCCGCTCCTCGCGCGACGGCCATAATGCCGCCGCCGCCGCCGCGCTCCTCCTCGCGGCGCTGGTCCTCTCCGGCGACGTCCTGCCGGCGGTCGTGGCCGGTGGCGCCCCCTCGTTCAACTACAAGGACGCGCTCACCAAGTCCATCATGTTCCTCGAGGCGCAGCGCTCCGGCAAGCTGCCGCCCACCAACCGCATCAAGTGGCGCGGCGACTCCGGCATGGAAGACGGCAAGCTCGCCAACGTGGACCTGAC TGGCGGGTACTACGACGCCGGCGACAACGTGAAGTACGGGCTGCCGCTGGCGTTCACGGTGACGACGCTGGCGTGGACGGCGATGGCGTTCGAGAAGGAGCTGAAGGCGGCGAGGGAGCTGGAGAACGTGCACGCGGCCATCAGGTGGGGCACCGACTACTTCCTCAAGGCGGCGACCAAGAAGGACCACCTGTGGGTGCAGGTCGGCGACCCCAACGCCGACCACCAGTGCTGGGTCCGCCCGGAGAACATGCCCACGCCCCGCACCCTCTACCAGATCAACGACAAGACCCCCGGCTCCGAGATTGCCGCCGAGACCGCCGCCGCCATGACCGCCTCCTCCATGGTCTTCCGCAAGGATAAGCCCTACTCCCGCCGCCTCCTCAACAAGGCCAAGCTGCTGTTCCAGTTCGCCAAGACGCACCAGGGAACCTACGACGGCGAGTGCCCCTTCTACTGCTCCTACTCCGGCTACAACGATGAGTTGCTGTGGGCGGCGACGTGGCTGTACCTGGCGACGAAGAGGCAGGTGTACGCGGACTTCATCGGGCACGAGGCGATCTCGTCGAGCGTGGCCGAGTTCAGCTGGGACCTCAAGTTCCCGGGCGCGCAGGTGCTCCTCGCGGAGCTCAACATGACATCCAGCGGCGGCCTCCAGAGCTTCAAGTCCCAGGCCGACAACTTCGTGTGCGCCGTGCTCCCGGACACCCCGTTCCACCAGGTGTCCATCACCCCGGGCGGCATGATCCACCTCCGCGACGGCGCCAACTCCCAGTACGTCACCAGCACGGCCTTCCTCTTCGTCGCCTACAGCGACATCCTCCGCCGGATCAACCAGCCGGTGATGTGCGGCGCCCAGGCCGTGCAGCCCGCCCGCCTCCTCCAGTTCGCCAAGCAGCAGATCGACTACCTCCTCGGCGCCAACCCGCGCGGCCGCTCCTACGTCGTCGGCTTCGGCGTCAACCCGCCCACGCAGCCGCACCACCGCGGCGCCTCCACCCCGGTGCTCCCCCCGGGCTACCAGGTCAACTGCGGGATGAGCTTCAGCGAGTGGTTCACCCCCGACCGGCCCAACCCCAACGAGCTCACCGGCGCGATCATGGGCGGCCCCGACGGCGGCGACAACTTCTCCGACAAGCGTGGCAACTCGTCCTGCACCGAGCCTTGCACGTACATCAACTCCCTCTCCATTGGCCCCCTCGCCGCCCTCGCCATCCGTGGCCCAAACCTCATCGCCACCCAGTAATTAATCACCATTATTATACACTGATTAATTACTGCTAAATTAACTAAAGATATTGAGTATATTACTATATTACTCCTCCTCCCCTGTATTAAATCTCGACGATATATACAAATTAATTTGTTGATTAATCGGAATCGAAATTAGAGCTGATGCATGCATGGACACGTGAGGTGATCGATCGGGCACACGATCGATCGATGACACGAACGAACAATTAATAACGCGAGAAAGGGCTCGCGCGAGTTGTTGGGGTAGGTCTCGGCTGGTCGTTAGGTTGGCCAGCTTATTTCTCGTTGCACGCACGCACGCACGTACGTACGCAGGCGCGCGCAACCGTGTGTAAGTGCGTGTGTGATGGATCGATCAACCGAGCGGCGCGCACGGGCGAATACGAACTTTTCCAAGTGATGAAGTGATCACGTATACACGTAGTACAGCAGCCGAGCTTTTCGGTGAGCGTGTACGACGTGTTTTTTTCATTGGACCGAACATAAAACATGTCAAGTACGTACGTGGTACGTTTGGTTAATGCATAAATGTATTTGTGGTTCTTCAAATCCCGTGCTCAGGTATGAATTAATTAATCTAGCTAGCTATATGGTGTACTATCTTGTACGAAGAAGAACATCTCTGATGCTGTATATCTTTGTGATGTATACTACACGCACAATAAATTATCTAGTT] [+] EMBL AK100190 [ CGTTGCTCCGGTGCTCGATCGGTCTCCCCGCCCGGCCGCCAGACGACGCGCCACATATGAAGCCCCGCTCCTCGCGCGACGGCCATAATGCCGCCGCCGCCGCCGCGCTCCTCCTCGCGGCGCTGGTCCTCTCCGGCGACGTCCTGCCGGCGGTCGTGGCCGGTGGCGCCCCCTCGTTCAACTACAAGGACGCGCTCACCAAGTCCATCATGTTCCTCGAGGCGCAGCGCTCCGGCAAGCTGCCGCCCACCAACCGCATCAAGTGGCGCGGCGACTCCGGCATGGAAGACGGCAAGCTCGCCAACGTGGACCTGAC TGGCGGGTACTACGACGCCGGCGACAACGTGAAGTACGGGCTGCCGCTGGCGTTCACGGTGACGACGCTGGCGTGGACGGCGATGGCGTTCGAGAAGGAGCTGAAGGCGGCGAGGGAGCTGGAGAACGTGCACGCGGCCATCAGGTGGGGCACCGACTACTTCCTCAAGGCGGCGACCAAGAAGGACCACCTGTGGGTGCAGGTCGGCGACCCCAACGCCGACCACCAGTGCTGGGTCCGCCCGGAGAACATGCCCACGCCCCGCACCCTCTACCAGATCAACGACAAGACCCCCGGCTCCGAGATTGCCGCCGAGACCGCCGCCGCCATGACCGCCTCCTCCATGGTCTTCCGCAAGGATAAGCCCTACTCCCGCCGCCTCCTCAACAAGGCCAAGCTGCTGTTCCAGTTCGCCAAGACGCACCAGGGAACCTACGACGGCGAGTGCCCCTTCTACTGCTCCTACTCCGGCTACAACGATGAGTTGCTGTGGGCGGCGACGTGGCTGTACCTGGCGACGAAGAGGCAGGTGTACGCGGACTTCATCGGGCACGAGGCGATCTCGTCGAGCGTGGCCGAGTTCAGCTGGGACCTCAAGTTCCCGGGCGCGCAGGTGCTCCTCGCGGAGCTCAACATGACATCCAGCGGCGGCCTCCAGAGCTTCAAGTCCCAGGCCGACAACTTCGTGTGCGCCGTGCTCCCGGACACCCCGTTCCACCAGGTGTCCATCACCCCGGGCGGCATGATCCACCTCCGCGACGGCGCCAACTCCCAGTACGTCACCAGCACGGCCTTCCTCTTCGTCGCCTACAGCGACATCCTCCGCCGGATCAACCAGCCGGTGATGTGCGGCGCCCAGGCCGTGCAGCCCGCCCGCCTCCTCCAGTTCGCCAAGCAGCAGATCGACTACCTCCTCGGCGCCAACCCGCGCGGCCGCTCCTACGTCGTCGGCTTCGGCGTCAACCCGCCCACGCAGCCGCACCACCGCGGCGCCTCCACCCCGGTGCTCCCCCCGGGCTACCAGGTCAACTGCGGGATGAGCTTCAGCGAGTGGTTCACCCCCGACCGGCCCAACCCCAACGAGCTCACCGGCGCGATCATGGGCGGCCCCGACGGCGGCGACAACTTCTCCGACAAGCGTGGCAACTCGTCCTGCACCGAGCCTTGCACGTACATCAACTCCCTCTCCATTGGCCCCCTCGCCGCCCTCGCCATCCGTGGCCCAAACCTCATCGCCACCCAGTAATTAATCACCATTATTATACACTGATTAATTACTGCTAAATTAACTAAAGATATTGAGTATATTACTATATTACTCCTCCTCCCCTGTATTAAATCTCGACGATATATACAAATTAATTTGTTGATTAATCGGAATCGA ] [+] EMBL C72499 [ TGCTCCGGTGCTCGATCGGTCTCCCCGCCCGGCCGCCAGACGACGCGCCACATATGAAGCCCCGCTCCTCGCGCGACGGCCATAATGCCGCCGCCGNCGCCGCGCTCCTCCTCGCGGCGCTGGTCCTCTCCGGCGACGTCCTGCCGGCGGTCGTGGCCGGTGGCGCCCCCTCGTTCAACTACAAGGACGCGCTCACCAAGTCCATCATGTTCCTCGAGGCGCAG GCTCCGGCAAGTTGCCGNCCACCAACCG ATCAAGTGGCGCGGCGACTTCGG ATGGAAGACGG AAG TCG CAACGTGGACCTTACTTGGCGGGTACTACGNCGCC GCGACAACG ] [+] EMBL AU183606 [ ACCNGGTGTCCATCACCCCGGGCGGNATGATCCACCTCCGCGACGGCGCCAACTCCCAGTACGTCACCAGCACGGCCTTCCTCTTC TCGCCTACAGCGACATCCTCCGCCGGATCAACCAGCCGGTGATGTGCGGCGCCCAGGCCGTGCAGCCCGCCCGCCTCCTCCAGTTCGCCAAGCAGCAGATCGACTACCTCCTCGGC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||