cluster # 8779

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8779 cluster # 8779 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8779#0 length = 1293 sequences # 5
consensusID : consensus_8779#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1293
fasta sequence
                              [GCCTTCATCTAGCCACGCAATTCTCCCCCAAAATTTCCCCCACAACAACGACCCGCCATTACTGCCCCTGTGCGCCTCGCCTCGCCACCGAACCGCCGCGAGCACCCGGAGGAAGAGAATCGAATCGAGGCGAGAGGAGGAGCAATGGCGACGGCGAGGACGCTGGCGGCTGCGGCGGCGGCGGCGAGGGCGTTCTCGTTGACGGCGACATCCGGCGGCGGCGTGTCCATGGTGCAGGGCGCGTCCCGCGGCATCGGGCTCGAGTTCGTGAGGCAGCTGCTGAAGAGGAGCGACGAGGGCCGCGTCGTCGCGACGTGTCGCGCGCCGGATTCAGCCGTGGAGCTTCAGAAGCTGAGGCAGGAGCACGAGCAGCGCCTCGCCGTGCTCCCGCTCGACGTCACCGACGAGAGCACCATAGAGGCAGCTGCGGCCTCGATAGGAGAGACCCATGGATCTCTGAACCTGCTGATCAATGCAACTGGGATCCTTTCAATTCCGAATGTGATACATCCAGAGACTACATTTAGCAAAGTTCAGAAGTCATCCCTGCTACTGGCATATGAAGTGAACGCTGTTGGCCCTATTTTAGTGATCAAGCATATGTGG-CCA-TTCCTGAAGGC-TGGAGGTTGC-TCTGAGACCGGGAGAGGA-TTTTCATTGGTTGCAAACATGAGTGCCAGAGTCGGTTCAATAGGTGACAATGGCCTAGGAGGCTGGCATTCATATAGGGCTTCTAAAACAGCACTGAATCAATTGACAAAGACTGTATC-AGTTGAGCTGGGGAAAAAGGACAACATTGCCTGCATCCTGCTGCATCCAGGAACCGTGGACACTGACCTCTCACGCCCTTTTCAGAAGAATGTTCCCAAGGATAAGCTCTTCACAAGGGA-GTTCTCTGTTCAGAAGCTACTGTCCATCATCGACAATGTCAA-GAAGAGCGACAACGGCAAGTTCTTCGCTTGGGATGGACAAGAAATCCCATGGTGATATCAATCAGCACTTCAGCAGAGCAAGTGAGCAACAGTGTCCAAAATTTGTGCTCAATATTTTCTCAGCCTTTATTGTGTTGTTGGCACCAAATAGATCGTGTCAATGCTCGATTTGAATTCTATTTGGATCTACGATGATCTGAACATAACAAACCAAAATCCATTTTCTTTTCGCTTCCTTTTTAGATGCATACAAATGATCGATGTAACTTTCTTTTGCCACTGGTGGCACAACAGTTAACCCAGTGTAATTAGCTGCAAC-GTATTNTGAAAAAAAAAAATGTTGAAAAACTTCCAGCCAAAAAAA]

[+] EMBL AK071747             [GCCTTCATCTAGCCACGCAATTCTCCCCCAAAATTTCCCCCACAACAACGACCCGCCATTACTGCCCCTGTGCGCCTCGCCTCGCCACCGAACCGCCGCGAGCACCCGGAGGAAGAGAATCGAATCGAGGCGAGAGGAGGAGCAATGGCGACGGCGAGGACGCTGGCGGCTGCGGCGGCGGCGGCGAGGGCGTTCTCGTTGACGGCGACATCCGGCGGCGGCGTGTCCATGGTGCAGGGCGCGTCCCGCGGCATCGGGCTCGAGTTCGTGAGGCAGCTGCTGAAGAGGAGCGACGAGGGCCGCGTCGTCGCGACGTGTCGCGCGCCGGATTCAGCCGTGGAGCTTCAGAAGCTGAGGCAGGAGCACGAGCAGCGCCTCGCCGTGCTCCCGCTCGACGTCACCGACGAGAGCACCATAGAGGCAGCTGCGGCCTCGATAGGAGAGACCCATGGATCTCTGAACCTGCTGATCAATGCAACTGGGATCCTTTCAATTCCGAATGTGATACATCCAGAGACTACATTTAGCAAAGTTCAGAAGTCATCCCTGCTACTGGCATATGAAGTGAACGCTGTTGGCCCTATTTTAGTGATCAAGCATATGTGG CCA TTCCTGAAGGC TGGAGGTTGC TCTGAGACCGGGAGAGGA TTTTCATTGGTTGCAAACATGAGTGCCAGAGTCGGTTCAATAGGTGACAATGGCCTAGGAGGCTGGCATTCATATAGGGCTTCTAAAACAGCACTGAATCAATTGACAAAGACTGTATC AGTTGAGCTGGGGAAAAAGGACAACATTGCCTGCATCCTGCTGCATCCAGGAACCGTGGACACTGACCTCTCACGCCCTTTTCAGAAGAATGTTCCCAAGGATAAGCTCTTCACAAGGGA GTTCTCTGTTCAGAAGCTACTGTCCATCATCGACAATGTCAA GAAGAGCGACAACGGCAAGTTCTTCGCTTGGGATGGACAAGAAATCCCATGGTGATATCAATCAGCACTTCAGCAGAGCAAGTGAGCAACAGTGTCCAAAATTTGTGCTCAATATTTTCTCAGCCTTTATTGTGTTGTTGGCACCAAATAGATCGTGTCAATGCTCGATTTGAATTCTATTTGGATCTACGATGATCTGAAC                                                                                                                                                                   ]
[+] EMBL AU166136             [                                                             CTGCCCCTGTGCGCCTCGCCTCGCCACCGAACCGCCGCGAGCACCCGGAGGAAGAGAATCGAATCGAGGCGAGAGGAGGAGCAATGGCGACGGCGAGGACGCTGGCGGCTGCGGCGGCGGCGGCGAGGGCGTTCTCGTTGACGGCGACATCCGGCNGCGGCGTGTCCATGGTGCAGGGCGCGTCCCG GGCATCGGGCTCGAGTTCGTGAGGCAGCTGCTGAAGAGGANCGACGAAGGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSS16490A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAGAAGTCATCCCTGCTACTGGCATATGAAGTGAACGCTGTTGGCCCTATTTTAGTGATCAAGCATATGTGG CCA TTCCTGAAGGC TGGAGGTTGC TCTGAGACCGGGAGAGGA TTTTCATTGGTTGCAAACATGAGTNCCAGAGTCGGTTCAATAGGTGACAATGGCCTAGGAGGCTGGCATTCATATAGGGCTTCTAAAACAGCACTGAATCAATTGACAAAGACTGTATCAAGTTGAGCTGGGGAAAAAGGACANCATTGNCTGCATCCTGCTGCATCCAGGAACCGTGGACACTGACCTCTCACGGCC TTTCAGANGAATGTTCCCANGGATAAGGTC TCACANGGGAGGTTCTCTGGTCAGAAGCTACTGTCCATCATCGGCAATGTCAAGGAAGAGCG CAACGGC                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU089822             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTAGTGATCAAGCATATGTGGCCCATTTCCTGAAGGCTTGGAGGTTGCTTNTGAGACCGGGAGAGGATTTTTCATTGGTTGCAAACATGAGTGCCAGAGTCGGTTCAATAGGTGACAATGGCCTAGGAGGCTGGCATTCATATAGGGCTTCTAAAACAGCACTGAATCAATTGACAAAGACTGTATC AGTTGAGCTGGGGAAAAAGGNCAACATTGCCTGCATCCTGCTGCATCCAGGAACCGTGGACACTGACCTCTCACGCCCTTTTCAGAAGAATGTTCCCAAGGATAAGCTCTTCACAAGGGA GTTCTCTGTTCAGAAGCTACTGTCCATCATCGACAATGTCAA GAAGAGCGACAACGGCAAGTTCTTCGCTTGGGATGGACAAGAAATCCCATGGTGATATCAATCAGCACTTCAGCAGAGCAAGTGAGCAACAGTGTCCAAAATTTGTGCTCAATATTTTCTCAGCCTTTATTGTGTTGTTGGCACCAAATAGATCGTGTCAATGCTCGATTTGAATTCTATTTGGATNTACGATGATCTGAACATAACAAACCAAAATCCATTTTCTTTTCGCTTCCTTTTTAGATGCATACAAATGATCGATGTAACTTTCTTTTGCCACTGGTGGCACAACAGTTAACCCAGTGTAATTAGCTGCAAC GTATTNTGAAAAAAAAAA                           ]
[+] EMBL AU172869             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGGATAAGCTCTTCACAAGGGA GTTCTCTGTTCAGAAGCTACTGTCCATCATCGACAATGTCAA GAAGAGCGACAACGGCAAGTTCTTCGCTTGGGATGGACAAGAAATCCCATGGTGATATCAATCAGCACTTCAGCAGAGCAAGTGAGCAACAGTGTCCAAAATTTGTGCTCAATATTTTCTCAGCCTTTATTGTGTTGTTGGCACCAAATAGATCGTGTCAATGCTCGATTTGAATTCTATTTGGATCTACGATGATCTGAACATAACAAACCAAAATCCATTTTCTTTTCGCTTCCTTTTTAGATGCATACAAATGATCGATGTAACTTTCTTTTGCCACTGGTGGCACAACAGTTAACCCAGTGTAATTAGCTGCAACTGTATTCTGATGGATGTATATGTTGAAAAACTTCCAGCCAAAAAAA]




>consensus_8779#0
GCCTTCATCTAGCCACGCAATTCTCCCCCAAAATTTCCCCCACAACAACGACCCGCCATT
ACTGCCCCTGTGCGCCTCGCCTCGCCACCGAACCGCCGCGAGCACCCGGAGGAAGAGAAT
CGAATCGAGGCGAGAGGAGGAGCAATGGCGACGGCGAGGACGCTGGCGGCTGCGGCGGCG
GCGGCGAGGGCGTTCTCGTTGACGGCGACATCCGGCGGCGGCGTGTCCATGGTGCAGGGC
GCGTCCCGCGGCATCGGGCTCGAGTTCGTGAGGCAGCTGCTGAAGAGGAGCGACGAGGGC
CGCGTCGTCGCGACGTGTCGCGCGCCGGATTCAGCCGTGGAGCTTCAGAAGCTGAGGCAG
GAGCACGAGCAGCGCCTCGCCGTGCTCCCGCTCGACGTCACCGACGAGAGCACCATAGAG
GCAGCTGCGGCCTCGATAGGAGAGACCCATGGATCTCTGAACCTGCTGATCAATGCAACT
GGGATCCTTTCAATTCCGAATGTGATACATCCAGAGACTACATTTAGCAAAGTTCAGAAG
TCATCCCTGCTACTGGCATATGAAGTGAACGCTGTTGGCCCTATTTTAGTGATCAAGCAT
ATGTGGCCATTCCTGAAGGCTGGAGGTTGCTCTGAGACCGGGAGAGGATTTTCATTGGTT
GCAAACATGAGTGCCAGAGTCGGTTCAATAGGTGACAATGGCCTAGGAGGCTGGCATTCA
TATAGGGCTTCTAAAACAGCACTGAATCAATTGACAAAGACTGTATCAGTTGAGCTGGGG
AAAAAGGACAACATTGCCTGCATCCTGCTGCATCCAGGAACCGTGGACACTGACCTCTCA
CGCCCTTTTCAGAAGAATGTTCCCAAGGATAAGCTCTTCACAAGGGAGTTCTCTGTTCAG
AAGCTACTGTCCATCATCGACAATGTCAAGAAGAGCGACAACGGCAAGTTCTTCGCTTGG
GATGGACAAGAAATCCCATGGTGATATCAATCAGCACTTCAGCAGAGCAAGTGAGCAACA
GTGTCCAAAATTTGTGCTCAATATTTTCTCAGCCTTTATTGTGTTGTTGGCACCAAATAG
ATCGTGTCAATGCTCGATTTGAATTCTATTTGGATCTACGATGATCTGAACATAACAAAC
CAAAATCCATTTTCTTTTCGCTTCCTTTTTAGATGCATACAAATGATCGATGTAACTTTC
TTTTGCCACTGGTGGCACAACAGTTAACCCAGTGTAATTAGCTGCAACGTATTNTGAAAA
AAAAAAATGTTGAAAAACTTCCAGCCAAAAAAA
clustalw multiple alignements is not computed in this case