cluster # 8790

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Oryza sativa
cluster # 8790 cluster # 8790 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8790#0 length = 1742 sequences # 5
consensusID : consensus_8790#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1742
fasta sequence
                              [ACGCTGGTCGACTCCACCACGCAAGAGATGGCCGCCGCCGCCGCCGCAGCAGCAGACCACGATGCCGCGCCGCGCGCGCACGCGCTCATCCTCCCGTACCCGGCGCAGGGCCATGTCATCCCGCTCATGGAGCTCGCGTACTGCCTCATCGACCGTGGCTTCGCCGTCACCTTCGTCAACACCGAGCACAACCACCGCCGCGTCGTGGCCGCCGCCGCTGGCGCAGGCGGCGTGCAAGCACCGGGGAGCCGGGCACGGCGCCTGCGGCTCGTGGCGGTGGCGGACGGGATGGGCGACGGCGACGACCGGGACAACCTAGTCCGCCTCAACGCCGTCATGGAGGAGGCCATCCCGCCTCAGCTGGAGCCGATTCTTGATGGCGCCGGCGGCGAGGGGCAGCTGGGCAAGGTGACGTGCGTGGTGGTCGATGTCGGCATGTCGTGGGCGCTCGATGCCGTGAAGCGGAGGGGCCTCCCGGGCGCCGCGCTCTGGGCAGCGTCGGCGGCGGTGCTCGCCGTGCTACTCGGAGCGCAGAAGCTGATACGCGATGGCGTCATTGATGACGACGGTGCACCACTCAAATTAGAGAACAACTCATTCCGTCTCTCCGAGTTCACGCCACCCATGGACGCGACCTTCCTTGCATGGAACTTCATGGGCAACCGTGATGCAGAACGTATGGTGTTCCATTACCTTACCTCCTCCGCACGGGCTGCTGCGGCCAAAGCAGACATTCTCCTCTGCAACTCATTCGTGGAGTTGGAGCCAGCCATCTTTACTCTAAAATCCCCAGCCACCATCCTCCCTATTGGACCACTTCGTACCGGGCAGCGTTTTGCTCATCAGGTAGAAGTGGTTGGGCACTTTTGGCAAACCAATGATGACACATGCCTCTCTTTCCTTGATGAACAACCCTATGGTTCTGTTGTATATGTGGCATTTGGCAGTCTTACTATCATGAGCCCAGGACAACTAAAGGAACTTGCACTAGGGCTAGAGGCTTCTGGTCATCCATTTCTATGGGTAGTTAGGCCTGGACTTGCTGGTAACCTCCCTACCTCATTCTTGGACGCCACCATGGGACAAGGAAAGGGTATAGTGGTGGAGTGGGCTCCACAGGAACAGGTGCTAGCGCACCCTGCAGTTGGGTGCTTTGTAACGCATTGCGGGTGGAACTCAACGGTAGAGAGCATTCGTAATGGAGTGCCCATGCTATGTTGGCCATATTTCACCGATCAGTTCACAAATCAAATATACATTTGTGATATTTGGCGGATTGGGCTAAAGATGGTGCAAACCTGTGGTGAGGGGATCGTGACCAAGGAGATAATGGTAGAGAGGTTGAAAGAGCTACTACTAGATGAGGGTATCAAGGAAAGGGTGCAAAGGTTGAAGGAGTTTGCAGAAACAAACATGAGCGAAGAGGGTGAGTCCACCAGTAATTTGAACGCAGTTGTCGAGCTTATGACAAGGCCAATGTCATAGAATATGGTTTAACGCAGGTTTTACGTTACTATTGATCCAATGAATAATGATATTTCATACTTCATTTTTATGGACCTGAAGTTTGCTTTGCAACCTATGATTGTTAAAACCATCTAATGTACGTGCTATATGCTCTAAAAGTAATATGTGTAAATGTGTATGGTACAAATGCATATATACTCCCTTTTTTATGTAGTTACCAACGTCATATATATTAAATTTTGGAAGTAGTATTTATTTCAAAAAAAAAAAAAAAA]

[+] EMBL AK106038             [ACGCTGGTCGACTCCACCACGCAAGAGATGGCCGCCGCCGCCGCCGCAGCAGCAGACCACGATGCCGCGCCGCGCGCGCACGCGCTCATCCTCCCGTACCCGGCGCAGGGCCATGTCATCCCGCTCATGGAGCTCGCGTACTGCCTCATCGACCGTGGCTTCGCCGTCACCTTCGTCAACACCGAGCACAACCACCGCCGCGTCGTGGCCGCCGCCGCTGGCGCAGGCGGCGTGCAAGCACCGGGGAGCCGGGCACGGCGCCTGCGGCTCGTGGCGGTGGCGGACGGGATGGGCGACGGCGACGACCGGGACAACCTAGTCCGCCTCAACGCCGTCATGGAGGAGGCCATCCCGCCTCAGCTGGAGCCGATTCTTGATGGCGCCGGCGGCGAGGGGCAGCTGGGCAAGGTGACGTGCGTGGTGGTCGATGTCGGCATGTCGTGGGCGCTCGATGCCGTGAAGCGGAGGGGCCTCCCGGGCGCCGCGCTCTGGGCAGCGTCGGCGGCGGTGCTCGCCGTGCTACTCGGAGCGCAGAAGCTGATACGCGATGGCGTCATTGATGACGACGGTGCACCACTCAAATTAGAGAACAACTCATTCCGTCTCTCCGAGTTCACGCCACCCATGGACGCGACCTTCCTTGCATGGAACTTCATGGGCAACCGTGATGCAGAACGTATGGTGTTCCATTACCTTACCTCCTCCGCACGGGCTGCTGCGGCCAAAGCAGACATTCTCCTCTGCAACTCATTCGTGGAGTTGGAGCCAGCCATCTTTACTCTAAAATCCCCAGCCACCATCCTCCCTATTGGACCACTTCGTACCGGGCAGCGTTTTGCTCATCAGGTAGAAGTGGTTGGGCACTTTTGGCAAACCAATGATGACACATGCCTCTCTTTCCTTGATGAACAACCCTATGGTTCTGTTGTATATGTGGCATTTGGCAGTCTTACTATCATGAGCCCAGGACAACTAAAGGAACTTGCACTAGGGCTAGAGGCTTCTGGTCATCCATTTCTATGGGTAGTTAGGCCTGGACTTGCTGGTAACCTCCCTACCTCATTCTTGGACGCCACCATGGGACAAGGAAAGGGTATAGTGGTGGAGTGGGCTCCACAGGAACAGGTGCTAGCGCACCCTGCAGTTGGGTGCTTTGTAACGCATTGCGGGTGGAACTCAACGGTAGAGAGCATTCGTAATGGAGTGCCCATGCTATGTTGGCCATATTTCACCGATCAGTTCACAAATCAAATATACATTTGTGATATTTGGCGGATTGGGCTAAAGATGGTGCAAACCTGTGGTGAGGGGATCGTGACCAAGGAGATAATGGTAGAGAGGTTGAAAGAGCTACTACTAGATGAGGGTATCAAGGAAAGGGTGCAAAGGTTGAAGGAGTTTGCAGAAACAAACATGAGCGAAGAGGGTGAGTCCACCAGTAATTTGAACGCAGTTGTCGAGCTTATGACAAGGCCAATGTCATAGAATATGGTTTAACGCAGGTTTTACGTTACTATTGATCCAATGAATAATGATATTTCATACTTCATTTTTATGGACCTGAAGTTTGCTTTGCAACCTATGATTGTTAAAACCATCTAATGTACGTGCTATATGCTCTAAAAGTAATATGTGTAAATGTGTATG                                                                                               ]
[+] EMBL AU090460             [                                                                                                                                                                                                                                                                                                                                                                                                      GAGGGGCAGCTGGGCAAGGTGACGTGCGTGGTGGTCGATGTCGGCATGTCGTGGGCGCTCGATGCCGTGAAGCGGAGGGGCCTCCCGGGCGCCGCGCTCTGGGCAGCGTCGGCGGCGGTGCTCGCCGTGCTACTCGGAGCGCAGAAGCTGATACGCGATGGCGTCATTGATGACGACGGTGCACCACTCAAATTANAGAACAACTCATTCCGTCTCTCCGAGTTCACGCCACCCATGGACGCGACCTTCCTTGCATGGAACTTCATGGGCAACCGTGATGCAGAACGTATGGTGTTCCATTACCTTACCTNCTCCGCACGGGCTGCTGCGGCCAAAGCAGACATTCTCCTCTGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB678330             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGGCCTGGACTTGTTGGTAACCTCCCTACCTCATTCTTGGACGCCACCATGGGACAAGGAAAGGGTATAGTGGTGGAGTGGGTTCCACAGGAACAGGTGTTAGCGCACCCTGCAGTTGGGTGCTTTGTAACGCATTGCGGGTGGAACTCAACGGTAGGGAGCATTCGTAATGGAGTGCCCATGCTATGTTGGCCATATTTCACCGATCAGTTCACAAATCAAATATACATTTGTGATATTTGGCGGATGGGGTTAAAGATGGTGCAAACCTGTGGTGAGGGGATCGTGCCCAAGGAGATAATGGTAGAGAGGTTGAAAGAGCTATTCCTAGATGAGGGTATCAAGGAAAGGGTGCAAAGGTTGAAGGAGTTTGCAGAAACAACCATGAGCGAAGAGGGTGAGTCCACCAGTAATTTGAATGCAGTTGTCGAGCTTATGACAAGGCCAATGTCATAGAATATGGTTTAACGCAGGTTTTTCTTTACTATTAATCCAATGAATAATAATCTTT                                                                                                                                                                                                          ]
[-] EMBL CA759291             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   caaggggGGGTGCTTTGTAACGCATTGCGGGTGGAACTCAACGGTAGAGAGCATTCGTAATGGAGTGCCCATGCTATGTTGGCCATATTTCACCGATCAGTTCCCAAATCAAATATACATTTGTGATATTTGGCGGATTGGGCTAAAGATGGTGCAAACCTGTGGTGAGGGGATCGTGACCAAGGAGATAATGGTAGAGAGGTTGAAAGAGCTACTACTAGATGAGGGTATCAAGGAAAGGGTGCAAAGGTTGAAGGAGTTTGCAGAAACAAACATGAGCGAAGAGGGTGAGTCCCCCAGAAATTTGAACGCAGTTGTCGAGCTTATGACAAGGCCAATGTCATAGAATATGGTTTAACGCAGGTTTTACGTTACTATTGATCCAATGAATAATGATATTTCATACTTCATTTTTATGGACCTGAAGTTTGCTTTGCAACCTATGATTGTTAAAACCATTTAATGTACGTGCTATATGCTCTAAAAGTAATATGTGTAAATGTGTATGGTACAAATGCATATATACTCCCTTTTTTATGTAGTTACCAACGTCATATATATTAAATTTTGGAAGTAGTATTTATTTCAAAAAAAAAAAAAAAA]
[+] EMBL AU090459             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGCCCATGCTATGTTGGCCATATTTCACCGATCAGTTCACAAATCAAATATACATTTGTGATATTTGGCGGATTGGGCTAAAGATGGTGCAAACCTGTGGTGAGGGGATCGTGACCAAGGAGATAATGGTAGAGAGGTTGAAAGAGCTACTACTAGATGAGGGTATCAAGGAAAGGGTGCAAAGGTTGAAGGAGTTTGCAGAAACAAACATGAGCGAAGAGGGTGAGTCCACCAGTAATTTGAACGCAGTTGTCGAGCTTATGACAAGGCCAATGTCATAGAATATGGTTTAACGCAGGTTTTACGTTACTATTGATCCAATGAATAATGATATTTCATACTTCATTTTTATGGACCTGAAGTTTGCTTTGCAACCTATGATTGTTAAAACCATCTAATGTACGTGCTATATGCTCTAAAAGTAATATGTGTAAATGTGTATGGTACAAATGCAaaaaaaaa                                                                            ]




>consensus_8790#0
ACGCTGGTCGACTCCACCACGCAAGAGATGGCCGCCGCCGCCGCCGCAGCAGCAGACCAC
GATGCCGCGCCGCGCGCGCACGCGCTCATCCTCCCGTACCCGGCGCAGGGCCATGTCATC
CCGCTCATGGAGCTCGCGTACTGCCTCATCGACCGTGGCTTCGCCGTCACCTTCGTCAAC
ACCGAGCACAACCACCGCCGCGTCGTGGCCGCCGCCGCTGGCGCAGGCGGCGTGCAAGCA
CCGGGGAGCCGGGCACGGCGCCTGCGGCTCGTGGCGGTGGCGGACGGGATGGGCGACGGC
GACGACCGGGACAACCTAGTCCGCCTCAACGCCGTCATGGAGGAGGCCATCCCGCCTCAG
CTGGAGCCGATTCTTGATGGCGCCGGCGGCGAGGGGCAGCTGGGCAAGGTGACGTGCGTG
GTGGTCGATGTCGGCATGTCGTGGGCGCTCGATGCCGTGAAGCGGAGGGGCCTCCCGGGC
GCCGCGCTCTGGGCAGCGTCGGCGGCGGTGCTCGCCGTGCTACTCGGAGCGCAGAAGCTG
ATACGCGATGGCGTCATTGATGACGACGGTGCACCACTCAAATTAGAGAACAACTCATTC
CGTCTCTCCGAGTTCACGCCACCCATGGACGCGACCTTCCTTGCATGGAACTTCATGGGC
AACCGTGATGCAGAACGTATGGTGTTCCATTACCTTACCTCCTCCGCACGGGCTGCTGCG
GCCAAAGCAGACATTCTCCTCTGCAACTCATTCGTGGAGTTGGAGCCAGCCATCTTTACT
CTAAAATCCCCAGCCACCATCCTCCCTATTGGACCACTTCGTACCGGGCAGCGTTTTGCT
CATCAGGTAGAAGTGGTTGGGCACTTTTGGCAAACCAATGATGACACATGCCTCTCTTTC
CTTGATGAACAACCCTATGGTTCTGTTGTATATGTGGCATTTGGCAGTCTTACTATCATG
AGCCCAGGACAACTAAAGGAACTTGCACTAGGGCTAGAGGCTTCTGGTCATCCATTTCTA
TGGGTAGTTAGGCCTGGACTTGCTGGTAACCTCCCTACCTCATTCTTGGACGCCACCATG
GGACAAGGAAAGGGTATAGTGGTGGAGTGGGCTCCACAGGAACAGGTGCTAGCGCACCCT
GCAGTTGGGTGCTTTGTAACGCATTGCGGGTGGAACTCAACGGTAGAGAGCATTCGTAAT
GGAGTGCCCATGCTATGTTGGCCATATTTCACCGATCAGTTCACAAATCAAATATACATT
TGTGATATTTGGCGGATTGGGCTAAAGATGGTGCAAACCTGTGGTGAGGGGATCGTGACC
AAGGAGATAATGGTAGAGAGGTTGAAAGAGCTACTACTAGATGAGGGTATCAAGGAAAGG
GTGCAAAGGTTGAAGGAGTTTGCAGAAACAAACATGAGCGAAGAGGGTGAGTCCACCAGT
AATTTGAACGCAGTTGTCGAGCTTATGACAAGGCCAATGTCATAGAATATGGTTTAACGC
AGGTTTTACGTTACTATTGATCCAATGAATAATGATATTTCATACTTCATTTTTATGGAC
CTGAAGTTTGCTTTGCAACCTATGATTGTTAAAACCATCTAATGTACGTGCTATATGCTC
TAAAAGTAATATGTGTAAATGTGTATGGTACAAATGCATATATACTCCCTTTTTTATGTA
GTTACCAACGTCATATATATTAAATTTTGGAAGTAGTATTTATTTCAAAAAAAAAAAAAA
AA
clustalw multiple alignements is not computed in this case