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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8791#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1327 fasta sequence
[GCATCCCTCTCCTCTCGTCCTGTGAGTTGCCCAAGACGAATCGCTTTGCTCACAATGGCTGGAGCTCGGTTGTCTCTCGCGTTCCTGTGCTTTGTGGTGGTGGTGGTGGCCTCCGCGCTCGCCGGCGGCGCCGGTGCGAGGAAGACGGTCGGCGAGTACGTGCTCAGGAAGGGGGACTTCTCCGTGAAGATCACCAACTGGGGAGCAACCATGATGTCGGTCGTCCTCCCTGATTCCAAAGGGAATTTGGCTGATGTTGTGCTTGGCCTAGACACCATTGCTGAGTACGTGAACGACACTAATTACTTCGGGCCGGTTACCGGACGGGTCGGGCAGAGGATAGCCAGGGGGCGGTTCGTTCTCGACGGGAAGGTGTATCACACGTACATCAACGACGGCAGGAACGCGATTCACGGTGGACACAGAGGGTTCAGCAAAGTCATATGGACGGTGAAGGAGTACGTCGGCGGCGGCGACTCGCCGTACATCACCTTGTACTACCGCAGCTTCGACGGAGAGCAAGGTTTCCCCGGGGACCTGGACGCGTACGTGACGTACCAGCTGTCGAGCCCGTACGTGCTGGCGCTGCGCATGAACGCGACGGCGCTGAACAAGGCGACGCCGGTGAACTTCCTGCAGCACACGTACTGGAACCTCGGCGGGCAGGGCCGCGGCGACGTGCTGGGGCACACGCTGCAGCTGTCGGCGTCGCGGTACACCCCGCTGGACGAGGAGCTCCTCCCGTCGTCGGGCGTCGTCGCGCCCGTCGCCGGCACGCCCTACGACTTCCGGCACCCCACCCCGATCGGCGCGCGCATCCGGCAGGTGATGGGCGGGCGCATCGCCGGGTACGACATCAACTACGTGATCGACGGCGAGGGCATGCGGAAGGTGGCCGCGGCGCGGGACGGCGCGTCGGGCCGCGCGCTGGAGCTGTGGGCGAACCAGCCGGCCATGCAGCTGTACACCGGCAACTGGCTGAACAACATCAAGGGCAAGGGCGGCAAGGTGTACCAGCAGTACGGCGGGTTCTGCCTGGAGACGCAGGGGTACGTGGACGCCGTGAACCACCCGGAGTTCCCCTCCATGACGGTCAGGCCCGGCCAGGTGTACAGGCACGACATGGCCTTCAAGTTCTCCTTCTAGCTCTCTAGCTGATCAGTCAGGATGATCGTGTGGTTGTAGTATACCATTTTTCAAGATTGTGCGAATAATTATTGGCGTGTTGTTGAAATAATTGAAGAATGGGGTCGTTCTCAAGCATGCGCTCCATGAACAATTATGTTTGCGGCAAGCTATCATGTTCATGAGCAGATATGTACACGTC]
[+] EMBL AK106058 [GCATCCCTCTCCTCTCGTCCTGTGAGTTGCCCAAGACGAATCGCTTTGCTCACAATGGCTGGAGCTCGGTTGTCTCTCGCGTTCCTGTGCTTTGTGGTGGTGGTGGTGGCCTCCGCGCTCGCCGGCGGCGCCGGTGCGAGGAAGACGGTCGGCGAGTACGTGCTCAGGAAGGGGGACTTCTCCGTGAAGATCACCAACTGGGGAGCAACCATGATGTCGGTCGTCCTCCCTGATTCCAAAGGGAATTTGGCTGATGTTGTGCTTGGCCTAGACACCATTGCTGAGTAC AACGACACTAATTACTTCGGGCCGGTTACCGGACGGGTCGGGCAGAGGATAGCCAGGGGGCGGTTCGTTCTCGACGGGAAGGTGTATCACACGTACATCAACGACGGCAGGAACGCGATTCACGGTGGACACAGAGGGTTCAGCAAAGTCATATGGACGGTGAAGGAGTACGTCGGCGGCGGCGACTCGCCGTACATCACCTTGTACTACCGCAGCTTCGACGGAGAGCAAGGTTTCCCCGGGGACCTGGACGCGTACGTGACGTACCAGCTGTCGAGCCCGTACGTGCTGGCGCTGCGCATGAACGCGACGGCGCTGAACAAGGCGACGCCGGTGAACTTCCTGCAGCACACGTACTGGAACCTCGGCGGGCAGGGCCGCGGCGACGTGCTGGGGCACACGCTGCAGCTGTCGGCGTCGCGGTACACCCCGCTGGACGAGGAGCTCCTCCCGTCGTCGGGCGTCGTCGCGCCCGTCGCCGGCACGCCCTACGACTTCCGGCACCCCACCCCGATCGGCGCGCGCATCCGGCAGGTGATGGGCGGGCGCATCGCCGGGTACGACATCAACTACGTGATCGACGGCGAGGGCATGCGGAAGGTGGCCGCGGCGCGGGACGGCGCGTCGGGCCGCGCGCTGGAGCTGTGGGCGAACCAGCCGGCCATGCAGCTGTACACCGGCAACTGGCTGAACAACATCAAGGGCAAGGGCGGCAAGGTGTACCAGCAGTACGGCGGGTTCTGCCTGGAGACGCAGGGGTACGTGGACGCCGTGAACCACCCGGAGTTCCCCTCCATGACGGTCAGGCCCGGCCAGGTGTACAGGCACGACATGGCCTTCAAGTTCTCCTTCTAGCTCTCTAGCTGATCAGTCAGGATGATCGTGTGGTTGTAGTATACCATTTTTCAAGATTGTGCGAATAATTATTGGCGTGTTGTTGAAATAATTGAAGAATGGGGTCGTTCTCAAGCATGCGCTCCATGAACAATTATGTTTGCGGCAAGCTATCATGTTCATGAGCAGATATGTACACGTC]
[+] EMBL CB660601 [ AAGACGAATCGCTTTGCTCACAATGGCTGGAGCTCGGTTGTCTCTCGCGTTCCTGTGCTTTGTGGTGGTGGTGGTGGCCTCCGCGCTCGCCGGCGGCGCCGGTGCGAGGAAGACGGTCGGCGAGTACGTGCTCAGGAAGGGGGACTTCTCCGTGAAGATCACCAACTGGGGAGCAACCATGATGTCGGTCGTCCTCCCTGATTCCAAAGGGAATTTGGCTGATGTTGTGCTTGGCCTAGACACCATTGCTGAGTACGTGAACGACACTAATTACTTCGGGCCGGTTACCGGACGGGTCGGGCAGAGGATAGCCAGGGGGCGGTTCGTTCTCGACGGGAAGGTGTATCACACGTACATCAACGACGGCAGGAACGCGATTCACGGTGGACACAGAGGGTTCAGCAAAGTCATATGGACGGTGAAGGAGTACGTCGGCGGCGGCGACTCGCCGTACATCACCTTGTACTACCGCAGCTTCGACGGAGAGCAAGGTTTCCCCGGGGACCTGGACGCGTACGTGACGTACCAGCTGTCGAGCCCGTACGTGCTGGCGCTGCGCATGAACGCGACGGCGCTGAACAAGGCGACGCCGGTGAACTTCCTGCAGCACACGTACTGGAACCTCGGCGGGCAGGGCCGCGGCGACGTGCTGGGGCACACGCTGCAGCTGTCGGCGTCGCGGTACACCCCGCTGGACGAGGAGCTCCTCCCGTCGTCGGGCGTCGTCGCGCCCGTCGCCGGCACGCCCTACGACTTCCGGCACCCCACCCCGATCGGCGCGCGCATCCGGCAGGTGATG ]
[+] EMBL CB676766 [ ATCGCTTTGCTCAC ATGGCTGGAGCTCGGTTGTCTCTCGCGTTCCTGTGCTTTGTGGTGGTGGTGGTGGCCTCCGCGCTCGCCGGCGGCGCCGGTGCGAGGAAGACGGTCGGCGAGTACGTGCTCAGGAAGGGGGACTTCTCCGTGAAGATCACCAACTGGGGAGCAACCATGATGTCGGTCGTCCTCCCTGATTCCAAAGGGAATTTGGCTGATGTTGTGCTTGGCCTAGACACCATTGCTGAGTACGTGAACGACACTAATTACTTCGGGCCGGTTACCGGACGGGTCGGGCAGAGGATAGCCAGGGGGCGGTTCGTTCTCGACGGGAAGGTGTATCACACGTACATCAACGACGGCAGGAACGCGATTCACGGTGGACACAGAGGGTTCAGCAAAGTCATATGGACGGTGAAGGAGTACGTCGGCGGCGGCGACTCGCCGTACATCACCTTGTACTACCGCAGCTTCGACGGAGAGCAAGGTTTCCCCGGGGACCTGGACGCGTACGTGACGTACCAGCTGTCGAGCCCGTACGTGCTGGCGCTGCGCATGAACGCGACGGCGCTGAACAAGGCGACGCCGGTGAACTTCCTGCAGCACACGTACTGGAACCTCGGCGGGCAGGGCCGCGGCGACGTGCTGGGGCACACGCTGCAGCTGTCGGCGTCGCGGTACACCCCGCTGGACGAGGAGCTCCTCCCGTCGTCGGGCGTCGTCGCGCCCGTCGCCGGCACGCCCTACGACTT ]
[-] EMBL CB660602 [ ATCACCTTGTACTACCGCAGCTTCGACGGAGAGCAAGGTTTCCCCGGGGACCTGGACGCGTACGTGACGTACCAGCTGTCGAGCCCGTACGTGCTGGCGCTGCGCATGAACGCGACGGCGCTGAACAAGGCGACGCCGGTGAACTTCCTGCAGCACACGTACTGGAACCTCGGCGGGCAGGGCCGCGGCGACGTGCTGGGGCACACGCTGCAGCTGTCGGCGTCGCGGTACACCCCGCTGGACGAGGAGCTCCTCCCGTCGTCGGGCGTCGTCGCGCCCGTCGCCGGCACGCCCTACGACTTCCGGCACCCCACCCCGATCGGCGCGCGCATCCGGCAGGTGATGGGCGGGCGCATCGCCGGGTACGACATCAACTACGTGATCGACGGCGAGGGCATGCGGAAGGTGGCCGCGGCGCGGGACGGCGCGTCGGGCCGCGCGCTGGAGCTGTGGGCGAACCAGCCGGCCATGCAGCTGTACACCGGCAACTGGCTGAACAACATCAAGGGCAAGGGCGGCAAGGTGTACCAGCAGTACGGCGGGTTCTGCCTGGAGACGCAGGGGTACGTGGACGCCGTGAACCACCCGGAGTTCCCCTCCATGACGGTCAGGCCCGGCCAGGTGTACAGGCACGACATGGCCTTCAAGTTCTCCTTCTAGCTCTCTAGCTGATCAGTCAGGATGATCGTGTGGTTGTAGTATACCAGTTTTCAAGATTGTGCGAATAATTATTGGGGTGTTGTAGAGATAATTGAAGAATGGG ]
[-] EMBL CB677030 [ TTCCCCGGGGACCTGGACGCGTACGTGACGTACCAGCTGTCGAGCCCGTACGTGCTGGCGCTGCGCATGAACGCGACGGCGCTGAACAAGGCGACGCCGGTGAACTTCCTGCAGCACACGTACTGGAACCTCGGCGGGCAGGGCCGCGGCGACGTGCTGGGGCACACGCTGCAGCTGTCGGCGTCGCGGTACACCCCGCTGGACGAGGAGCTCCTCCCGTCGTCGGGCGTCGTCGCGCCCGTCGCCGGCACGCCCTACGACTTCCGGCACCCCACCCCGATCGGCGCGCGCATCCGGCAGGTGATGGGCGGGCGCATCGCCGGGTACGACATCAACTACGTGATCGACGGCGAGGGCATGCGGAAGGTGGCCGCGGCGCGGGACGGCGCGTCGGGCCGCGCGCTGGAGCTGTGGGCGAACCAGCCGGCCATGCAGCTGTACACCGGCAACTGGCTGAACAACATCAAGGGCAAGGGCGGCAAGGTGTACCAGCAGTACGGCGGGTTCTGCCTGGAGACGCAGGGGTACGTGGACGCCGTGAACCACCCGGAGTTCCCCTCCATGACGGTCAGGCCCGGCCAGGTGTACAGGCACGACATGGCCTTCAAGTTCTCCTTCTAGCTCTCTAGCTGATCAGTCAGGATGATCGTGTGGTTGTAGTATACCATTTTTCAAGATTGTGCGAATAATTATTGGCGTGTTGTTGAAATAATTGAAGAATGGGGTCGTTCTCGAGCATGCGCTCCATGAACAATTATGTTTGCGG ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||