cluster # 8796

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Oryza sativa
cluster # 8796 cluster # 8796 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8796#0 length = 1369 sequences # 5
consensusID : consensus_8796#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1369
fasta sequence
                              [CTAAGGATCACAATTATCAAAACTAGGGTAGCACACCAGCGTTGTTGAGTTATGACAACAGCCAAACATGTTGTGAAATATAATCCTATTCCCAACAAAAATAAGAAATAAATAGAACAGCTGATTGACTGACTACTCCAGTTACTAACACAATCAGACTCAATAAGGAACAATAGATTATCTTAAATTTTCTCTCAAGCTTTTTTTGCGGATAGTGCTAAAACTAGAAAAGACAATCTCCAACCCCTCCTCCTAACTTGGCATCAGGCTTCTTTTCCATCAGATGATGCCCCTCGTCTTCATGAGATTTTATCACCTCTCGGAACTGGCTGTCACCCTCTGCATTATCATAGACTCTGCTGCCTGAATAGCTTCTGATGTTCCAGTTATCGTCACTTTCCTCTCAGATGTGCCAGCAATGAAGTCACCCCTATCAGATATCTTGATCCTGGCACCACTAGCCTGAATGATCTCTGTAATGTTCCTTCCGGCACGTCCTACGACAGCACCAATATGTTCATCAGCAATACCAATAGTGAGAGAATCTTGGGCATCATTGTTAGCAGGTGATCTCATAGGTGTACTGGGCTTGTTGTTTTGGTACCTTCCTCCATACCCATTAGGTCCATAGTTCACAGCATTATTATACGGCACCTGTGGGATCATATACCCAACAGGAACACCAGGGTAACTAGGGAAACCAAGGCCTGCATATGGAAATGGGGAACTCAGATTAGGTGGGTAGTGAACGTCCTCCGATAACTTGCTTAATATCAAATATATTGCACGCATCTGATGGTCCAAGGGTCCTGTGACAGTAACGAGTCTATCATGCAAACCATCAAAATTGTTATCCTGTGGTGAAATCTTGATTCCAGCATGTGAGTCTTCAATGAATGACTTGATTGTTGACCCTCCTTTACCAATGATTCCACCACAAGAACTGTTAGGAACTACAAGTCTAACTTTAGGTCTAGCTTCAGCTTCATTGCTTTCTTCCCCCTCAGCTAAAAGCTTCTCGAGAATCAGCTCCATGGCCTTTATTACTTCATCAAACAGACCAGAAACCATGATAATTCTGTCATTTGTACCAGGGAAGAACTCATGGCTACGCGATAGCTGAATACGAGCCCCAGACTGGGACTGAAATTCATTAATGGTTGATCCACCCTTGCCAATAATGCATCCTGCTGCCGTGTTTGATACCAGAAACCTCAGATGGGTTGGCTTCTCCTTGTCATCTTCGGAGGAGGCCTG-CTGCTGCGGGGGCGGGGGCGAGGAGCGGGGGGCGCGCTTGGGGGCGGACTCCGGCGAGGAGGCGTAGGGGGAGCCCGGGGCTTCCATGGCGGCGGCGGCGGAGGGCGGAGGC]

[+] EMBL CB660861             [CTAAGGATCACAATTATCAAAACTAGGGTAGCACACCAGCGTTGTTGAGTTATGACAACAGCCAAACATGTTGTGAAATATAATCCTATTCCCAACAAAAATAAGAAATAAATAGAACAGCTGATTGACTGACTACTCCAGTTACTAACACAATCAGACTCAATAAGGAACAATAGATTATCTTAAATTTTCTCTCAAGCTTTTTTTGCGGATAGTGCTAAAACTAGAAAAGACAATCTCCAACCCCTCCTCCTAACTTGGCATCAGGCTTCTTTTCCATCAGATGATGCCCCTCGTCTTCATGAGATTTTATCACCTCTCGGAACTGGCTGTCACCCTCTGCATTATCATAGACTCTGCTGCCTGAATAGCTTCTGATGTTCCAGTTATCGTCACTTTCCTCTCAGATGTGCCAGCAATGAAGTCACCCCTATCAGATATCTTGATCCTGGCACCACTAGCCTGAATGATCTCTGTAATGTTCCTTCCGGCACGTCCTACGACAGCACCAATATGTTCATCAGCAATACCAATAGTGAGAGAATCTTGGGCATCATTGTTAGCAGGTGATCTCATAGGTGTACTGGGCTTGTTGTTTTGGTACCTTCCTCCATACCCATTAGGTCCATAGTTCACAGCATTATTATACGGCACCTGTGGGATCATATACCCAACAGGAACACCAGGGTAACTAGGGAAACCAAGGCCTGCATATGGAAATGGGGAACTCAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB682552             [   AGGATCACAATTATC CATCTAGGGTAGCACACCAGCGTTGTTGAGTTATGACAACAGCCAAACATGTTGTGAAATATAATCCTATTCCCAACAAAAATAAGAAATAAATAGAACAGCTGATTGACTGACTACTCCAGTTACTAACACAATCAGACTCAATAAGGAACAATAGATTATCTTAAATTTTCTCTCAAGCTTTTTTTGCGGATAGTGCTAAAACTAGAAAAGACAATCTCCAACCCCTCCTCCTAACTTGGCATCAGGCTTCTTTTCCATCAGATGATGCCCCTCGTCTTCATGAGATTTTATCACCTCTCGGAACTGGCTGTCACCCTCTGCATTATCATAGACTCTGCTGCCTGAATAGCTTCTGATGTTCCAGTTATCGTCACTTTCCTCTCAGATGTGCCAGCAATGAAGTCACCCCTATCAGATATCTTGATCCTGGCACCACTAGCCTGAATGATCTCTGTAATGTTCCTTCCGGCACGTCCTACGACAGCACCAATATGTTCATCAGCAATACCAATAGTGAGAGAATCTTGGGCATCATTGTTAGCAGGTGATCTCATAGGTGTACTGGGCTTGTTGTTTTGGTACCTTCCTCCATACCCATTAGGTCCATAGTTCACAGCATTATTATACGGCACCTGTGGGATCATATACCCAACAGGAACACCAGGGTAACTAGGGAAACCAAGGCCTGCATATGGAAATGGGGAACTCAGATTAGGTGGGTAGTGAACGTCCTCCGATAACTTGCTTAATATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB678485             [                                                             CCAAACATGTTGTGAAATATAATCCTATTCCCAACAAAAATAAGAAATAAATAGAACAGCTGATTGACTGACTACTCCAGTTACTAACACAATCAGACTCAATAAGGAACAATAGATTATCTTAAATTTTCTCTCAAGCTTTTTTTGCGGATAGTGCTAAAACTAGAAAAGACAATCTCCAACCCCTCCTCCTAACTTGGCATCAGGCTTCTTTTCCATCAGATGATGCCCCTCGTCTTCATGAGATTTTATCACCTCTCGGAACTGGCTGTCACCCTCTGCATTATCATAGACTCTGCTGCCTGAATAGCTTCTGATGTTCCAGTTATCGTCACTTTCCTCTCAGATGTGCCAGCAATGAAGTCACCCCTATCAGATATCTTGATCCTGGCACCACTAGCCTGAATGATCTCTGTAATGTTCCTTCCGGCACGTCCTACGACAGCACCAATATGTTCATCAGCAATACCAATAGTGAGAGAATCTTGGGCATCATTGTTAGCAGGTGATCTCATAGGTGTACTGGGCTTGTTGTTTTGGTACCTTCCTCCATACCCATTAGGTCCATAGTTCACAGCATTATTATACGGCACCTGTGGGATCATATACCCAACAGGAACACCAGGGTAACTAGGGAAACCAAGGCCTGCATATGGAAATGGGGAACTCAGATTAGGTGGGTAGTGAACGTCCTCCGATAACTTGCTTAATATCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB660860             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TATACCCAACAGGAACACCAGGGTAACTAGGGAAACCAAGGCCTGCATATGGAAATGGGGAACTCAGATTAGGTGGGTAGTGAACGTCCTCCGATAACTTGCTTAATATCAAATATATTGCACGCATCTGATGGTCCAAGGGTCCTGTGACAGTAACGAGTCTATCATGCAAACCATCAAAATTGTTATCCTGTGGTGAAATCTTGATTCCAGCATGTGAGTCTTCAATGAATGACTTGATTGTTGACCCTCCTTTACCAATGATTCCACCACAAGAACTGTTAGGAACTACAAGTCTAACTTTAGGTCTAGCTTCAGCTTCATTGCTTTCTTCCCCCTCAGCTAAAAGCTTCTCGAGAATCAGCTCCATGGCCTTTATTACTTCATCAAACAGACCAGAAACCATGATAATTCTGTCATTTGTACCAGGGAAGAACTCATGGCTACGCGATAGCTGAATACGAGCCCCAGACTGGGACTGAAATTCATTAATGGTTGATCCACCCTTGCCAATAATGCATCCTGCTGCCGTGTTTGATACCAGAAACCTCAGATGGGTTGGCTTCTCCTTGTCATCTTCGGAGGAGGCCTG CTGCTGCGGGGGCGGGGGCGAGGAGCGGGGGGCGCGCTTGGGGGCGGACTCCGGCGAGGAGGCGTAGGGGGAGCCCGGGGCTTCCATGGCGGCGGCGGCGGAGGGCGGAGGC]
[-] EMBL CB682551             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TACCCATCAGGAACACCAGGGTAACTAGGGAAACCAAGACCTGCATATGGAAATGGGGAACTCAGATTAGGTGGGTAGTGAACGTCCTCCGATAACTTGCTTAATATCAAATATATTGCACTCATCTGATGGTCCAAAGGTCCTGTGACAGTAACGAGTCTATCATGCAAACCAACAAAATTGTTATCCTGTGGTGAAATCTTGATTCCAGCATGTGAGTCTTCAATGAATGACTTGATTGTTGACCCTCCTTTCCCAATGATTCCACCACAAGAACTGTTAGGAACTACAAGTCTATCTTTAGGTCTAGCTTCAGCTTCATTGCTTTCTTCCCCTTCAGCTAAAAGCTTCTCGAGAATCAGCTCCATGGCCTTTATTACTTCATCAAACAGACCAGATACCATGATAATTCTGTCATTTGTACCAGGGAAGAACTCATGGCTACGCGATAGCTGAATACGAGCCCCAGTCTGGGACTGAAATTCATTAATGGTTGATCCACCCTTGCCAATAATGCATCCTGCTGCCGTGTTTGATCCCAGAAACCTCAGATGGGTTGGCTTCTCCTTGTCATCTTCGGAGGAGGCCTGTCTGCTGCGGTTGCGGTTTTTAGGGGCAGTGGGCGCGCTTGGGGGCGGACTCCGGCGAGGAGGCGTAGGGGGAGCCCGG                                  ]




>consensus_8796#0
CTAAGGATCACAATTATCAAAACTAGGGTAGCACACCAGCGTTGTTGAGTTATGACAACA
GCCAAACATGTTGTGAAATATAATCCTATTCCCAACAAAAATAAGAAATAAATAGAACAG
CTGATTGACTGACTACTCCAGTTACTAACACAATCAGACTCAATAAGGAACAATAGATTA
TCTTAAATTTTCTCTCAAGCTTTTTTTGCGGATAGTGCTAAAACTAGAAAAGACAATCTC
CAACCCCTCCTCCTAACTTGGCATCAGGCTTCTTTTCCATCAGATGATGCCCCTCGTCTT
CATGAGATTTTATCACCTCTCGGAACTGGCTGTCACCCTCTGCATTATCATAGACTCTGC
TGCCTGAATAGCTTCTGATGTTCCAGTTATCGTCACTTTCCTCTCAGATGTGCCAGCAAT
GAAGTCACCCCTATCAGATATCTTGATCCTGGCACCACTAGCCTGAATGATCTCTGTAAT
GTTCCTTCCGGCACGTCCTACGACAGCACCAATATGTTCATCAGCAATACCAATAGTGAG
AGAATCTTGGGCATCATTGTTAGCAGGTGATCTCATAGGTGTACTGGGCTTGTTGTTTTG
GTACCTTCCTCCATACCCATTAGGTCCATAGTTCACAGCATTATTATACGGCACCTGTGG
GATCATATACCCAACAGGAACACCAGGGTAACTAGGGAAACCAAGGCCTGCATATGGAAA
TGGGGAACTCAGATTAGGTGGGTAGTGAACGTCCTCCGATAACTTGCTTAATATCAAATA
TATTGCACGCATCTGATGGTCCAAGGGTCCTGTGACAGTAACGAGTCTATCATGCAAACC
ATCAAAATTGTTATCCTGTGGTGAAATCTTGATTCCAGCATGTGAGTCTTCAATGAATGA
CTTGATTGTTGACCCTCCTTTACCAATGATTCCACCACAAGAACTGTTAGGAACTACAAG
TCTAACTTTAGGTCTAGCTTCAGCTTCATTGCTTTCTTCCCCCTCAGCTAAAAGCTTCTC
GAGAATCAGCTCCATGGCCTTTATTACTTCATCAAACAGACCAGAAACCATGATAATTCT
GTCATTTGTACCAGGGAAGAACTCATGGCTACGCGATAGCTGAATACGAGCCCCAGACTG
GGACTGAAATTCATTAATGGTTGATCCACCCTTGCCAATAATGCATCCTGCTGCCGTGTT
TGATACCAGAAACCTCAGATGGGTTGGCTTCTCCTTGTCATCTTCGGAGGAGGCCTGCTG
CTGCGGGGGCGGGGGCGAGGAGCGGGGGGCGCGCTTGGGGGCGGACTCCGGCGAGGAGGC
GTAGGGGGAGCCCGGGGCTTCCATGGCGGCGGCGGCGGAGGGCGGAGGC
clustalw multiple alignements is not computed in this case