|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8808#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2325 fasta sequence
[ACACTTGTGAGCAACTTGGTTGTTAACCATGTCCATGTAGACATTGAATTGAAGCTGGCGCAGCTAGCTAGCAACAATGGCGGGAGGAGGGGTGATGCACGTCCTGAACGAATGGGCGATCGAGATCCTGTTGCTGGTCAGCTTCTTCCTCCAGCTCGTCCTCCTCTTCTTCGCCGGGTTCCGCCGCGTGGGCGCCTCCGCCGTGCTGAAGCTGGTGGTCTGGCCGGCGTACCAGCTCGCCGACTTCGTCGCCACGTTCACCATCGGCCACCTCTCGGTCGGCCACGAGCGGCGGCGGCTGGTGGCGTTCTGGGCGCCGTTCCTGCTGCTCCACCTCGGCGGCCCGGACAACATCACTGCCTACTCCCTCGCCGACAACCAGCTCTGGAAGCGCCACCTCGTGTTCGGCCTCGTCCCCCAGGCGCTCGGCGCCGCCAACGTCATCTACCGCTCCTTCGCCGGCACCACCACCACGCTGCTCTCGGCCGCCATGCTCATGTTCGCCATTGGCGTCCTCAAGTACGGCGAGCGGACATGGGCGCTCAAGTACGCCAACCTCAGCAGCATCCGGAGCTCCGTCAATGTCGTCAAGACGCCGCCGGAGCGTCGGGTTC---AGTACTACCCTCCGTCGTCGCTGCCTCGGCGTGACGGCGAGGAGGCCGACGAGGAGGAGCTTCTTCTTGTTGCTCACTTCCACTTCCATATCTGCAAGCGCGCCATGGCGGACTCGTCGGTGGAGGTGGACTCCGGCGACTACGACCCCAAGATTTTCTCCTACGGGTGGAAGGAGATGTGCCGGGTGGTGGAGATGGAGCTCTCCCTCATGTACGACATCCTCTACACCAAGGCGGCCGTGATGCACACCTGGTTCGGCTTCGCCATCCGCGTCGTCTCGCCGCTCGCCGTCGCCGCCGCGCTCGGCCTGTTCCGCCTCGAGGACGACCTCGGCAGCTACCGGCAGATCGACGTCGACATCACCTACGCGCTGCTGGTCGCCGCCTTCGTCCTGGAGACGACGTCGCTGTGCCGGGCGGTCGGGTCGACGTGGATCGCCGCCTTGCTGCAGACCACGCGGTGGGCGTGGCTCCGCCACGAGGCCCTCTGCACCGGCCGGTGGTCCCGCCTCCGCCGTGCCGTCGCGTCGCTCCGGCGGCTCGTCCACCGGGACGGGCACAGGTACTGGTCCGGCACCATGGGGCAGTTCAACGTGCTCCACTTCTGCACCCGCGACGGCGCGGCGGAGCGGCTCGGCGCGGCGGCGGAGAAGGCCGGGCTCGGGAGCTGGTGGAACAGGCACGTCAACGCCGGCAGCATCGTCATCTCCGACGAGGTCAAGGAGCTCGTGTTCGGACACATCCAGAACATGTTGAGAGCCGTGGACTCCATGTCGACCACCGAGCTCGACGCCATCAGGACAACGAGAGGCCAGCGCGCGCTCCGGCGCCACGGACTTGACGGCGACCTCGCCGCCAGCCTCGGCGAGGAGTTCCACCAAGGCATCCTCACCTGGCACGTCGCCACGGACATCTACCTCGCCGTCAGCGGCGGCGACCGATCTTCTCCAGCCAACGCCGGCGACAGGGCGGCGGCGGCGCGGCAGCTCACGGAGGCGGTCCGCGCGCTGTCCAACTACATGATGTTCCTCGT---CATACGCCCCGACATGCTCCCGGGCCTCGTGCTCCGGAGGCTGTACCAGGTGACATGCGAAGACATGGCCAGGATATGGCGGGAACGCAAGGACACCCACGAATCATCGTCTTCTTCCTCCAGCTGCCGCTTCATCGACGTCCTAAGCATGGTCACCAGGCTGTT-CCAGCTGCACGTCGACGACCCGACCTCCGCCTCCAGGACGCCGGAGAGGAAGAAGCTGGCGGCGATGCTACGTGACAACGCCTACAATGGCGATCAGAATGTGAGGAGCCATGGCGTCTTCGCCGGCGCTCTGCTCGCCGACGAGCTGCTGCTGAAGGAGAAGGAGCG-GCGGATGTCGTCGGACG-GCGGCGG---CGGGTGGTTGTTGCCGGTGATCTTCGAGGTGTGGGTGGAGATGCTGCTGTACGCCGGCAACCGGTGCAGCAGGGAGTCGCATGCGAAGCAGCTCAACA-GTGGGGGTGAGCTCATCA-CGCTGGTGTGGCTGTTGGCTGAACACGCTGGGCTGTATCGTATAAACAAACCTAAGCAGCATTTCAAGTGTGCTGAATATGCTAGTGATATGGTATAGTTTACTGAGGTAGACTCTGTCTCATTTTTGTTTTTTTGGGCCTACAAGTCTGCAACACCGGAACATCCCAATGGATGAATGATTTGGCAGGTATATATGGAAAAGTG]
[+] EMBL AK111451 [ACACTTGTGAGCAACTTGGTTGTTAACCATGTCCATGTAGACATTGAATTGAAGCTGGCGCAGCTAGCTAGCAACAATGGCGGGAGGAGGGGTGATGCACGTCCTGAACGAATGGGCGATCGAGATCCTGTTGCTGGTCAGCTTCTTCCTCCAGCTCGTCCTCCTCTTCTTCGCCGGGTTCCGCCGCGTGGGCGCCTCCGCCGTGCTGAAGCTGGTGGTCTGGCCGGCGTACCAGCTCGCCGACTTCGTCGCCACGTTCACCATCGGCCACCTCTCGGTCGGCCACGAGCGGCGGCGGCTGGTGGCGTTCTGGGCGCCGTTCCTGCTGCTCCACCTCGGCGGCCCGGACAACATCACTGCCTACTCCCTCGCCGACAACCAGCTCTGGAAGCGCCACCTCGTGTTCGGCCTCGTCCCCCAGGCGCTCGGCGCCGCCAACGTCATCTACCGCTCCTTCGCCGGCACCACCACCACGCTGCTCTCGGCCGCCATGCTCATGTTCGCCATTGGCGTCCTCAAGTACGGCGAGCGGACATGGGCGCTCAAGTACGCCAACCTCAGCAGCATCCGGAGCTCCGTCAATGTCGTCAAGACGCCGCCGGAGCGTCGGGTTC AGTACTACCCTCCGTCGTCGCTGCCTCGGCGTGACGGCGAGGAGGCCGACGAGGAGGAGCTTCTTCTTGTTGCTCACTTCCACTTCCATATCTGCAAGCGCGCCATGGCGGACTCGTCGGTGGAGGTGGACTCCGGCGACTACGACCCCAAGATTTTCTCCTACGGGTGGAAGGAGATGTGCCGGGTGGTGGAGATGGAGCTCTCCCTCATGTACGACATCCTCTACACCAAGGCGGCCGTGATGCACACCTGGTTCGGCTTCGCCATCCGCGTCGTCTCGCCGCTCGCCGTCGCCGCCGCGCTCGGCCTGTTCCGCCTCGAGGACGACCTCGGCAGCTACCGGCAGATCGACGTCGACATCACCTACGCGCTGCTGGTCGCCGCCTTCGTCCTGGAGACGACGTCGCTGTGCCGGGCGGTCGGGTCGACGTGGATCGCCGCCTTGCTGCAGACCACGCGGTGGGCGTGGCTCCGCCACGAGGCCCTCTGCACCGGCCGGTGGTCCCGCCTCCGCCGTGCCGTCGCGTCGCTCCGGCGGCTCGTCCACCGGGACGGGCACAGGTACTGGTCCGGCACCATGGGGCAGTTCAACGTGCTCCACTTCTGCACCCGCGACGGCGCGGCGGAGCGGCTCGGCGCGGCGGCGGAGAAGGCCGGGCTCGGGAGCTGGTGGAACAGGCACGTCAACGCCGGCAGCATCGTCATCTCCGACGAGGTCAAGGAGCTCGTGTTCGGACACATCCAGAACATGTTGAGAGCCGTGGACTCCATGTCGACCACCGAGCTCGACGCCATCAGGACAACGAGAGGCCAGCGCGCGCTCCGGCGCCACGGACTTGACGGCGACCTCGCCGCCAGCCTCGGCGAGGAGTTCCACCAAGGCATCCTCACCTGGCACGTCGCCACGGACATCTACCTCGCCGTCAGCGGCGGCGACCGATCTTCTCCAGCCAACGCCGGCGACAGGGCGGCGGCGGCGCGGCAGCTCACGGAGGCGGTCCGCGCGCTGTCCAACTACATGATGTTCCTCGT CATACGCCCCGACATGCTCCCGGGCCTCGTGCTCCGGAGGCTGTACCAGGTGACATGCGAAGACATGGCCAGGATATGGCGGGAACGCAAGGACACCCACGAATCATCGTCTTCTTCCTCCAGCTGCCGCTTCATCGACGTCCTAAGCATGGTCACCAGGCTGTT CCAGCTGCACGTCGACGACCCGACCTCCGCCTCCAGGACGCCGGAGAGGAAGAAGCTGGCGGCGATGCTACGTGACAACGCCTACAATGGCGATCAGAATGTGAGGAGCCATGGCGTCTTCGCCGGCGCTCTGCTCGCCGACGAGCTGCTGCTGAAGGAGAAGGAGCG GCGGATGTCGTCGGACG GCGGCGG CGGGTGGTTGTTGCCGGTGATCTTCGAGGTGTGGGTGGAGATGCTGCTGTACGCCGGCAACCGGTGCAGCAGGGAGTCGCATGCGAAGCAGCTCAACA GTGGGGGTGAGCTCATCA CGCTGGTGTGGCTGTTGGCTGAACACGCTGGGCTGTATCGTATAAACAAACCTAAGCAGCATTTCAAGTGTGCTGAATATGCTAGTGATATGGTATAGTTTACTGAGGTAGACTTTG ]
[+] EMBL CB634557 [ GCAACTTGGTTGTTAACCATGTCCATGTAGACATTGAATTGAAGCTGGCGCAGC C AGCAACAATGGCGGGAGGAGGGGTGATGCACCTCCTGAACGAATGGGCGATCGAGATCCTGCTGCTGGTCAGCTTCTCCCTCCAGCTCGCCCTCCTCTTCTTCGCCGGGTTCCGCCGCGTGGGCGCCTCCGCCGTGCTGAAGCTGGTGGTCTGGCCGGCGTACCAGCTCGCCGACTTCGTCGCCACGTTCACCATCGGCCACCTCTCCGTCGGGCACGAGCGGCGGCGGCTGGTCGCGTTCTGGGCGCCGTTCCTGCTGCTCCACCTCGGCGGCCCGGACAACATCACCGCCTACTCCCTCGCCGACAACCAGCTCTGGAAGCGCCACCTCGTGTTCGGCCTCGTCCCCCAGGCGCTCGGCGCCGCTAACGTCATCTACCGCTCCTTCGCCGGCACCACCACCACGCTGCTCTCGGCCGCCATGCTCATGTTCGCCATTGGCGTCCTCAAGTACGGCGAGAGGACGTGGGCGCTCAAGTACGCCAACCTCAGCAGCATCCGGAGCTCCGTCAATGTCGTCGAGACGCCGCCGGAGCGTCGGCTTCGGTACTACTACCCTCCGTCGTCGCTGCCTCGGCGTGACGGCGAGGATGCCGATGAGGAGGAGCTTCTTCTTGTTGCTCACTCCCACTTCCATATCTGCAAGCGCGCCATGGCGGACTCGTCGGTGGAGGTGGACTCCGGCGACTACGACTCCAAGAT ]
[-] EMBL CB634558 [ CGCGGCGGCTCGCGGAGGCCGTCCGCGCGCTGTCCAACTACATGATGTTCCTCGTCGCCATCCGCCCCGACATGCTCCCGGGCCTCGTGCTCCGGAGGCTGTACCAGGTGACATGCGAAGACATGGCCAGAATATGGCGGGAACGCAAGAACATCCACGAATCATCGACTTCTTCCTCCAGCTGCCGCTTCATCAACGCCGTAAGCATGGTCACCAGGCTGTT CCAGCTGCACGTCGACGACCCGACCTCCGCCTCCAGGACGCCGGAGAGGAAGAAACTGGCGGCGATGCTACGTGACAACGCCTACAACGGCGATCAGAATGTGAGGAGCCATGACGTCTTCGCCGGAGCTATGCTCGCCGACGAGCTGCTGCTGAAGGAGAAGGAGCG GCGGATGTCGTCGGACG GCGGCGGCGACGGGTGGTTGTTGCCGGTGATCTTCGAGGTGTGGGTGGAGATGCTGCTGTACGCCGGCAACCGGTGCAGCAGGGAGTCGCATGCGAAGCAGCTCAACA GTGGTGGTGAGCTCATCA CGCTGGTGTGGCTGTTGGCTGAACACGCTGGGCTGTATCGTATAAACAAAACTAAGCAGCATTTTAAGTGTGCTGAATATGCTACTGTTATGGTATAGTTTACTGAGGTAGACTCTGTCTCATTTTTGTTTTTTTGGGCCTACAAGTCTGCAACACCGGAACATCCCAATGGATGAATGATTTGGCAGGTATATATGGAAAAGTG]
[+] EMBL BI810439 [ CCAGGCTGTTACCA CTGCACGTCGACGACCCGACCTCCGCCTCCAGGACCCCGGAGAGGAAGAAGCTGGCGGCGATGCTACGTGACAACGCCTACAATGGCGATCAGAATGTGAGGA CCATGGCGTCTTCGCCGGCGCTCTGCTCGCCGACGAGCTGCTGCTGAAGGAGAAGGACCGCGCGGATGTCGTCGGACGCGCGGC CGGGT GTTGTTGCCGGTGATCTTCGAGGTGTGGGTGGAGATGCTGCTGTACGCC GCAACCGGT CA CAGGGAGTCGCATGCGAAGCAGCTCAACACGTGGGGGTGAGCTCATCACCGCTGGTGT GCT TTGGCTGAACACGCTGGGCTGTATCGTAT AAC AACCTAA CAGCATTTCAAGTGTGCTGAATATGCTAGTGATATGGTATAATTTACTGAGGTAaaaaaaaaa ]
consensusID : consensus_8808#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2033 fasta sequence
[TGGGCACCGTTCCTGCTCCTGCATCTTGCTGGCCCCGACAACATCACCGCCTACTCCCTTGAGGACACGGTTCTCGCCGGGAGACAGGTGCTCACCGTCACAGTACAGATCTTGGGAGCATCATATGTCCTGTACAAGCAGATATACAACCGTGACGGCGGCGGTAGCGCCTTGCTGTGGGTCTCTGTCGTCATGTTCGCCATCGGCATTGCCAAGTACGTGGAGAGGGCCGTGGCGATTAGGCAGGCCAACCTGGGAAAGATGAGAAGCTCAAACAAGAAGAGCAAGTTAGGAAAACGAAGCTTCGGAGATGTTAAAGAGGTGGGTAACGAGAGAACCTTGCTGGTTGCTCATGGCCTGCTCCATATCACAAGGGTGCCTTCATCGATCATTCAGACGACGAGAATCCCCTGAAAAGTGATGCGGCACGATCACAAATATTTGGTCATGGATGGGAGGAGATGTGCAGGGTGGTGGAGATGGAGCTGTCCCTCATGTACGACATCCTCTACACCAAGGTAGCTGTGGTGCACACATGGTTCGGCTACATCATCCGTTTGGCGTCGCCGGTCGTCAGTGCCACCGCGTTCCTGCTGTTCTGGTTCCAAGGTAAAGATGAGCAGAGGAGGGCAGATGTGCTCATCACCTACATCTTGATGGTCGGCACCATCATCCTGGATGTCAGATGGCTTCTCAGGGCGATGGTGTCTACATGGACCTATTCGTTCCTGAACAATAGGCCAGATTGCTGGTTTCATGCCGCATGCTTGAGCTCCGGGAGGTGGCGCCTGCTCCGTCGTCTTGTCCTCTGTCTGGATCCATGCCGGCTGCTCGGCAAGGAACCAACTAGGTACAGGATGTGGTCAGGAACCGTTGGGCAGTACAACTTATTGCATGAGTGCACTCATGGCACGATCGGCATGTTTGGCTCGCTGCTGAAGAAGGTTGTATCAGATGACAGTTGGATGGAGTACCAATACCATGACGCAAGGGGTCTTGCAATTTCATCGGAGGTAAGGGAATTGTTGTTCCAACAGATATGGGAGCAACTCAAGACAGCATATCCAGCTGCGACTGTTGAGAAGACTAATTTACTCTCTTGCAGCAGTCTGGGATATGCCGGGAGTGCATGGAAGAACCGGGAGCTTGATGAAGCTATGAACTTTGCTCATGCATTCCAAGAGACAATCCTTATCTGGCACATCGCCACGGACATCTTCCTCTTGGTCAGTCGTCAATTTGCATCACCGTCCAACTCCAAGCAAGTACAGGTGATCATGGCGCTGTCGAATTACATGGCGTTCCTCGTAGCGGTCCGCCCAAGCATGCTACCAGGCCTTAAGCTACGCAGCCTGTACAAAGAAACTCACAAGGCTCTTGTGGAAATATTGCTCAAAGAAGGATATTCTGGTAGCTTGATAGAGAGAAAGGAGAAGCTGGCCGACAGGCTAATAGAAATGGAGAAGGAGAAGCAGGTCCAAATCTCAAACGCTCCAAAGAAGGTAAGCAACTGGAGGCCAGGTTATAGTAATCACAAGTCAAGGCCAGCAAAGGCAAGTGTTCTTTATGACGAGAATATAATTCTGTCTGATGGAGCTAAATTCGCCGAGGTGCTGCTAAGTAGAGCTTGGGTAGACAGCCCACATATAACCGCACATATCGAAATTAGCCCTGAGAGATATGAAAGGATTAAAGAGATGATTCCTAAATTGGAAGAACAGGTTGCGTTTGATATCTCGGTAATGCTGGACTATATCTTCAAGGCATGGGTTCGTATTCTGATGTATGCGTCCGTCCGATGCACAAGGGATTCTCATGCCAAGCAGCTCGCCTGTGGAGGCGAGCTCACAACAATTGTCTGGATACTCAACGAACACGCTGGCATATTTCGCATCCCCGGTGATGCCAGAGATGAAACTGGCGAGCTTGGAACCTAATGCCTAGTAACACAGCCTATCGTTAACCCGTGTGTTACACGGCCTATTGTTTGTTATTTGTATTATGAAGACTATAAATTAAAAATGTTTAAATAG]
[+] EMBL AK102300 [TGGGCACCGTTCCTGCTCCTGCATCTTGCTGGCCCCGACAACATCACCGCCTACTCCCTTGAGGACACGGTTCTCGCCGGGAGACAGGTGCTCACCGTCACAGTACAGATCTTGGGAGCATCATATGTCCTGTACAAGCAGATATACAACCGTGACGGCGGCGGTAGCGCCTTGCTGTGGGTCTCTGTCGTCATGTTCGCCATCGGCATTGCCAAGTACGTGGAGAGGGCCGTGGCGATTAGGCAGGCCAACCTGGGAAAGATGAGAAGCTCAAACAAGAAGAGCAAGTTAGGAAAACGAAGCTTCGGAGATGTTAAAGAGGTGGGTAACGAGAGAACCTTGCTGGTTGCTCATGGCCTGCTCCATATCACAAGGGTGCCTTCATCGATCATTCAGACGACGAGAATCCCCTGAAAAGTGATGCGGCACGATCACAAATATTTGGTCATGGATGGGAGGAGATGTGCAGGGTGGTGGAGATGGAGCTGTCCCTCATGTACGACATCCTCTACACCAAGGTAGCTGTGGTGCACACATGGTTCGGCTACATCATCCGTTTGGCGTCGCCGGTCGTCAGTGCCACCGCGTTCCTGCTGTTCTGGTTCCAAGGTAAAGATGAGCAGAGGAGGGCAGATGTGCTCATCACCTACATCTTGATGGTCGGCACCATCATCCTGGATGTCAGATGGCTTCTCAGGGCGATGGTGTCTACATGGACCTATTCGTTCCTGAACAATAGGCCAGATTGCTGGTTTCATGCCGCATGCTTGAGCTCCGGGAGGTGGCGCCTGCTCCGTCGTCTTGTCCTCTGTCTGGATCCATGCCGGCTGCTCGGCAAGGAACCAACTAGGTACAGGATGTGGTCAGGAACCGTTGGGCAGTACAACTTATTGCATGAGTGCACTCATGGCACGATCGGCATGTTTGGCTCGCTGCTGAAGAAGGTTGTATCAGATGACAGTTGGATGGAGTACCAATACCATGACGCAAGGGGTCTTGCAATTTCATCGGAGGTAAGGGAATTGTTGTTCCAACAGATATGGGAGCAACTCAAGACAGCATATCCAGCTGCGACTGTTGAGAAGACTAATTTACTCTCTTGCAGCAGTCTGGGATATGCCGGGAGTGCATGGAAGAACCGGGAGCTTGATGAAGCTATGAACTTTGCTCATGCATTCCAAGAGACAATCCTTATCTGGCACATCGCCACGGACATCTTCCTCTTGGTCAGTCGTCAATTTGCATCACCGTCCAACTCCAAGCAAGTACAGGTGATCATGGCGCTGTCGAATTACATGGCGTTCCTCGTAGCGGTCCGCCCAAGCATGCTACCAGGCCTTAAGCTACGCAGCCTGTACAAAGAAACTCACAAGGCTCTTGTGGAAATATTGCTCAAAGAAGGATATTCTGGTAGCTTGATAGAGAGAAAGGAGAAGCTGGCCGACAGGCTAATAGAAATGGAGAAGGAGAAGCAGGTCCAAATCTCAAACGCTCCAAAGAAGGTAAGCAACTGGAGGCCAGGTTATAGTAATCACAAGTCAAGGCCAGCAAAGGCAAGTGTTCTTTATGACGAGAATATAATTCTGTCTGATGGAGCTAAATTCGCCGAGGTGCTGCTAAGTAGAGCTTGGGTAGACAGCCCACATATAACCGCACATATCGAAATTAGCCCTGAGAGATATGAAAGGATTAAAGAGATGATTCCTAAATTGGAAGAACAGGTTGCGTTTGATATCTCGGTAATGCTGGACTATATCTTCAAGGCATGGGTTCGTATTCTGATGTATGCGTCCGTCCGATGCACAAGGGATTCTCATGCCAAGCAGCTCGCCTGTGGAGGCGAGCTCACAACAATTGTCTGGATACTCAACGAACACGCTGGCATATTTCGCATCCCCGGTGATGCCAGAGATGAAACTGGCGAGCTTGGAACCTAATGCCTAGTAACACAGCCTATCGTTAACCCGTGTGTTACACGGCCTATTGTTTGTTATTTGTATTATGAAGACTATAAATTAAAAATGTTTAAATAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8808#0 ACACTTGTGAGCAACTTGGTTGTTAACCATGTCCATGTAGACATTGAATTGAAGCTGGCG 60
consensus_8808#1 ------------------------------------------------------------
consensus_8808#0 CAGCTAGCTAGCAACAATGGCGGGAGGAGGGGTGATGCACGTCCTGAACGAATGGGCGAT 120
consensus_8808#1 ------------------------------------------------------------
consensus_8808#0 CGAGATCCTGTTGCTGGTCAGCTTCTTCCTCCAGCTCGTCCTCCTCTTCTTCGCCGGGTT 180
consensus_8808#1 ------------------------------------------------------------
consensus_8808#0 CCGCCGCGTGGGCGCCTCCGCCGTGCTGAAGCTGGTGGTCTGGCCGGCGTACCAGCTCGC 240
consensus_8808#1 ------------------------------------------------------------
consensus_8808#0 CGACTTCGTCGCCACGTTCACCATCGGCCACCTCTCGGTCGGCCACGAGCGGCGGCGGCT 300
consensus_8808#1 ------------------------------------------------------------
consensus_8808#0 GGTGGCGTTCTGGGCGCCGTTCCTGCTGCTCCACCTCGGCGGCCCGGACAACATCACTGC 360
consensus_8808#1 ----------TGGGCACCGTTCCTGCTCCTGCATCTTGCTGGCCCCGACAACATCACCGC 50
***** *********** ** ** ** * ***** *********** **
consensus_8808#0 CTACTCCCTCGCCGACAACCAGCTCTGGAAGCGCCACCTCGTGTTCGGCCTCGTCCCCCA 420
consensus_8808#1 CTACTCCCTTGAGGACA--CGGTTCTCGCCGGGAGACAG-GTGCTCACCGTCACAGTACA 107
********* * **** * * *** * * * ** *** ** * ** **
consensus_8808#0 GGCGCTCGGCGCCGCCAACGTCATCTAC---------CGCTCCTTCGCCGGCACCACCAC 471
consensus_8808#1 GATCTTGGGAGCATCATATGTCCTGTACAAGCAGATATACAACCGTGACGGCGGCGGTAG 167
* * ** ** * * *** * *** * * * **** * *
consensus_8808#0 CACGCTGCTCTCGGCCGCCATGCTCATGTTCGCCATTGGCGTCCTCAAGTACGGCGAGCG 531
consensus_8808#1 CGCCTTGCTGTGGGTCTCTGTCGTCATGTTCGCCATCGGCATTGCCAAGTACGTGGAGAG 227
* * **** * ** * * * ************* *** * ******** *** *
consensus_8808#0 GACATGGGCGCTCAAGTACGCCAACCTCAGCAGCATCCGGAGCTCCGTCAATGTCGTCAA 591
consensus_8808#1 GGCCGTGGCGATTAGGCAGGCCAACCTGGGAAAGATGAGAAGCTCAAACAA--------- 278
* * **** * * * * ******** * * ** * ***** ***
consensus_8808#0 GACGCCGCCGGAGCGTCGGGTTCAGTACTACCCTCCGTCGTCGCTGCCTCGGCGTGACGG 651
consensus_8808#1 ----------GAAGAGCAAGTTAGGAA------------AACGAAGCTTCGGA--GATGT 314
** * *** * * ** ** **** ** *
consensus_8808#0 CGAGGAGGCCGACGAGGAGGAGCTTCTTCTTGTTGCTCACTTCCACTTCCATATCTGCAA 711
consensus_8808#1 TAAAGAGGTGGGTAACGAGAGAACCTTGCTGGTTGCTCATGGCCTGCTCCATATC-ACAA 373
* **** * * *** * ** ******** ** ******** ***
consensus_8808#0 GCGCGCCATGGCGGACTCGTCGGTGGAGGTGGACTCC------GGCGAC----TACGACC 761
consensus_8808#1 GGGTGCCTTCATCGATCATTCAGACGACGAGAATCCCCTGAAAAGTGATGCGGCACGATC 433
* * *** * ** ** * ** * * * ** * ** **** *
consensus_8808#0 CCAAGATTTTCTCCTACGGGTGGAAGGAGATGTGCCGGGTGGTGGAGATGGAGCTCTCCC 821
consensus_8808#1 ACAA-ATATTTGGTCATGGATGGGAGGAGATGTGCAGGGTGGTGGAGATGGAGCTGTCCC 492
*** ** ** * ** *** *********** ******************* ****
consensus_8808#0 TCATGTACGACATCCTCTACACCAAGGCGGCCGTGATGCACACCTGGTTCGGCTTCGCCA 881
consensus_8808#1 TCATGTACGACATCCTCTACACCAAGGTAGCTGTGGTGCACACATGGTTCGGCTACATCA 552
*************************** ** *** ******* ********** * **
consensus_8808#0 TCCGCGTCGTCTCGCCGCTCGCCGTCGCCGCCGCGCTCGGCCTGTTCCGCCTCGAGGACG 941
consensus_8808#1 TCCGTTTGGCGTCGCCGGTCGTCAGTGCCACCGCGTTCCTGCTGTTCTGGTTCCAAGGTA 612
**** * * ****** *** * *** ***** ** ****** * ** * *
consensus_8808#0 ACCTCGGCAGCTACCGGCAGATCGACGTCGACATCACCTACGCGCTGCTGGTCGCCGCCT 1001
consensus_8808#1 AA---GATGAGCAGAGGAGGGCAGATGTGCTCATCACCTACATCTTGATGGTCGGCACCA 669
* * * ** * ** ** ********** ** ****** * **
consensus_8808#0 TCGTCCTGGAGACGACGTCGCTGTGCCGGGCGGTCGGGTCGACGTGGATCGCCGCCTTGC 1061
consensus_8808#1 TCATCCTGGATGTCAGATGGCTTCTCAGGGCGATGGTGTCTACATGGACCTATTCGTTCC 729
** ******* * * *** * ***** * * *** ** **** * * ** *
consensus_8808#0 TGCAGACCACGCGGTGGGCGTGGCTCCGCCACGAGGCCCTCTGCACCGGCCGGTGGTCCC 1121
consensus_8808#1 TGAACAATAGGCCAGATTGCTGGTTTCATGCCGCATGCTTGAGCTCCGGGAGGTGGCGCC 789
** * * * ** *** * * ** * * ** **** ***** **
consensus_8808#0 GCCTCCGCCGTGCCGTC----GCGTCGCTCC--GGCGGCTCGTCCACCGGGA------CG 1169
consensus_8808#1 TGCTCCGTCGTCTTGTCCTCTGTCTGGATCCATGCCGGCTGCTCGGCAAGGAACCAACTA 849
***** *** *** * * * *** * ***** ** * ***
consensus_8808#0 GGCACAGGTACTGGTCCGGCACCATGGGGCAGTTCAACGTGCTCCACTTCTGCACCCGCG 1229
consensus_8808#1 GGTACAGGATGTGGTCAGGAACCGTTGGGCAGTACAACTTATTGCATGAGTGCACTC--- 906
** ***** ***** ** *** * ******* **** * * ** ***** *
consensus_8808#0 ACGGCGCGGCGGAGCGGCTCGGCGCGGCGGCGGAGAAGGCCGGGCTCGGGAGCTGGTGGA 1289
consensus_8808#1 ATGGCACGATCGGCATGTTTGGCTCGCTGCTGAAGAAGGTTGTATCAGATGACAGTTGGA 966
* *** ** * * * *** ** * * ****** * * * * ****
consensus_8808#0 ------ACAGGCACGTCAACGCCGGCAGCATCGTCATCTCCGACGAGGTCAAGGAGCTCG 1343
consensus_8808#1 TGGAGTACCAATACCATGACGCAAGGGGTCTTGCAATTTCATCGGAGGTAAGGGAATTGT 1026
** ** **** * * * * ** ** ***** * *** *
consensus_8808#0 TGTTCGGACACATCCAGAACATGTTGAGAGCCGTGGACTCCATGTCGACCACCGAGCTCG 1403
consensus_8808#1 TGTTCCAACAGATATGGGAGCAACTCAAGACAGCATATCCAGCTGCGACTGTTGAGAAGA 1086
***** *** ** * * * * * * * * **** ***
consensus_8808#0 ACGCCAT-CAGGACAACGAGAGGCCAGCGCGCGCTCCGGCGCCACGGACTTGACGGCGAC 1462
consensus_8808#1 CTAATTTACTCTCTTGCAGCAGTCTGGGATATGCCGGGAGTGCATGGAAGAACCGGGAGC 1146
* * * ** * * ** * ** *** *** *
consensus_8808#0 CTC-----GCCGCCAGCCTCGGCGAGGAGTTCCACCAAGGCATCCTCACCTGGCACGTCG 1517
consensus_8808#1 TTGATGAAGCTATGAACTTTGCTCATGCATTCCAAGAGACAATCCTTATCTGGCACATCG 1206
* ** * * * * * * ***** * ***** * ******* ***
consensus_8808#0 CCACGGACATCTACCTCGCCGTCAGCGGCGG-------CGACCGATCTTCTCCAGCCAA- 1569
consensus_8808#1 CCACGGACATCTTCCTCTTGGTCAGTCGTCAATTTGCATCACCGTCCAACTCCAAGCAAG 1266
************ **** ***** * **** * ***** ***
consensus_8808#0 CGCCGGCGA-CAGGGCGGCGGCGG----CGCGGCAGCTCACGGAGGCGGTCCGCGCGC-T 1623
consensus_8808#1 TACAGGTGATCATGGCGCTGTCGAATTACATGGC-GTTCCTCGTAGCGGTCCGCCCAAGC 1325
* ** ** ** **** * ** * *** * ** * ********* *
consensus_8808#0 GTCCAACTACATGATGTTCCTCGTCATACGCCCCGACATGCTCCCGGGCCTCGTG----- 1678
consensus_8808#1 ATGCTACCAGGCCTTAAGCTACGCAGCCTGTACAAAGAAACTCACAAGGCTCTTGTGGAA 1385
* * ** * * * ** * * * * *** * * *** **
consensus_8808#0 ------CTCCGGAGGCTGTAC-CAGGTGACATGCGAAGACATGGCCAGGATATGGCGGGA 1731
consensus_8808#1 ATATTGCTCAAAGAAGGATATTCTGGTAGCTTGATAGAGAGAAAGGAGAAGCTGGCCGAC 1445
*** ** * *** * ** * ** * **** *
consensus_8808#0 ACGC-AAGGACACCCACGAATCATCGTCTTCTTCCTCCAGCTGCCGCTTCATCGACGTCC 1790
consensus_8808#1 AGGCTAATAGAAATGGAGAAGGAGAAGCAGGTCCAAATCTCAAACGCTCCAAAGAAGGTA 1505
* ** ** * *** * * * * * **** ** ** *
consensus_8808#0 TAAGCATGGTCACCAGGCTGTTCCAGCTGCACGTCGACGACC-----------CGACCTC 1839
consensus_8808#1 AGCAACTGGAGGCCAGGTTATAGTAATCACAAGTCAAGGCCAGCAAAGGCAAGTGTTCTT 1565
*** ***** * * * ** *** * * * * **
consensus_8808#0 CGCCTCCAGGAC--------GCCGGAGAGGAAGAAGCTGGCGGCGATGCTACGTGACAAC 1891
consensus_8808#1 TATGACGAGAATATAATTCTGTCTGATGGAGCTAAATTCGCCGAGGTGCTGCTAAGTAGA 1625
* ** * * * ** * ** * ** * * **** * *
consensus_8808#0 GCCTACAATGGCGATCAGAATGTGAGGAGCCATGGCGTC-TTCGCC---GGCGCTCTGCT 1947
consensus_8808#1 GCTTGGGTAGACAGCCCACATATAACCGCACATATCGAAATTAGCCCTGAGAGATATGAA 1685
** * * * * ** * * *** ** ** *** * * * **
consensus_8808#0 CG--CCGACGAGCTGCTGCTGAAGGAGAAGGAGCGGCGGATGTCGTCGGACGGCGGCGGC 2005
consensus_8808#1 AGGATTAAAGAGATGATTCCTAAATTGGAAGAACA---GGTTGCGTTTGATATC-----T 1737
* * *** ** * * ** * * ** * * * *** ** *
consensus_8808#0 GGGTGGTTGTTGCCGGTGATCTTCGAGGTGTGGGTGGAGATGCTGCTGTACGCCGGCAAC 2065
consensus_8808#1 CGGTAATGCTGGACTAT-ATCTTCAAGGCATGGGTTCGTATTCTGATGTATGCGTCCGTC 1796
*** * * * * * ****** *** ***** ** *** **** ** * *
consensus_8808#0 CGGTGCAGCAGGGAGTCGCATGCGAAGCAGCTCAACAGTGGGGGTGAGCTCATCACGCTG 2125
consensus_8808#1 CGATGCACAAGGGATTCTCATGCCAAGCAGCTCGCCTGTGGAGGCGAGCTCACAACAATT 1856
** **** ***** ** ***** ********* * **** ** ******* ** *
consensus_8808#0 GTGTGGCTGTTGGCTGAACACGCTGGGCTGTATCGTATAAACAAACCTAAGCAGCATTTC 2185
consensus_8808#1 GTCTGGATACTCAACGAACACGCTGGCATATTTCGCAT-------CCCCGGTGATGCCAG 1909
** *** * * *********** * * *** ** ** *
consensus_8808#0 AAGTGTGCTGAATATGCTAGTGATATGGTATAGTTTACTGAGGTAGACTCTGTCTCATTT 2245
consensus_8808#1 AGATGAAACTGGCGAGCTTGGAACCTAAT---GCCTAGTAACACAGCCTATCGTTAACCC 1966
* ** *** * * * * * ** * * ** ** * * *
consensus_8808#0 TTGTTTTTTTGGGCCTACAAGTCTGCAACACCGGAACATCCCAATGGATGAATGATTTGG 2305
consensus_8808#1 GTGTGTTACACGGCCTATT-GTTTGTTAT-TTGTATTAT----GAAGACTATAAATTAAA 2020
*** ** ****** ** ** * * * ** ** * ***
consensus_8808#0 CAGGTATATATGGAAAAGTG 2325
consensus_8808#1 AATGTTTAAATAG------- 2033
* ** ** ** *
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||