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Oryza sativa
cluster # 8809 cluster # 8809       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8809#0 length = 1654 sequences # 3  
consensus_8809#1 length = 1539 sequences # 2  

consensusID : consensus_8809#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1654
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTCCAGTTTGTACCCGTCGTTTGGTTGCCGAAAATACCTCGGATCATGAATAATGAGTTTTCTGGTTCAAAAAAAAAAAGGATTCATCACCTACCCTGCAAATCAAGTTAATCCCCCCAATGAAAGATCATTCGTCTACACATCCCATTCAATTTTTCTACACGTAACCAGCGTAAATTGTACTGTCTACAGGTCAGTTTCCCTAGCTCGTTCCGTTCCCTACAAAGCTAATGCCATGTACTTTCAGGCTTTCAGTTCTTCAGTCATCATCGTCCGCCGGATCATCTTCATCGTCAGGGAGCTCTATGTCGTCACTATCAAGTGCTTGTCCTGTCTGGGACCTTGACTCATTTCTACTAACCCCATAAAAATTTGATGAGTCCAAAAAATACGGGAGATTTAAAACCTGCAAAAAAAACTCAGTTTGTGGATTCCTACAATGAACTGTTATGGAGGGATTGGATGCTTGACAGGAAGGATCATAAAATGCACCAGTCTGGACAAAATCAATAGGTTTAGCCCCTCTGGCATTTAACTTGTTCCTAACCCATTGCAAGTCATCTTGAGTGTCAACCTGTTCATCCAGCATTGTAAATGGCATCCGAGTTAAGGAGAAAACATTGTTGAATTTCCGTGTTATTGCAAGCCATTCTTCATCATACTGGATCTCATGTGGTCCTGGACCGGATGGAATGTCTATTACCTGGAGAAAGCCCCGCCGAGGAAGACATTTATCAAGTGCAAGAAACTTAGTTGTAGGCCCA-CCCTCTCCATGTTGGATAACAGCTGGAAACTTACAATGAAGATGAGCTGAAAACCAGTATGGTGGTTTTAGTTTATTCAGTAGTCTTGCTGCTGGTTCGCTGCCTAGTGTTCTCTTGTTGACCTCTTCTTCAAAGAATCTTTTCTCCCGAATAAGCTTCTGCCAGTTTCCGTACTCAGTAATGCCCAGAGGCCAATCATGTGACATGAATATATCTAGAGGCTCCTTCACATGCATTAACTTGAGAACATCATAATGCCTTACATGGTACACTGACCTTATAGTGTTTTCATTGTATGGGGGCCTCTCATAGTGTCCTAAGTGATAATGTTGTTGCTTATATATTCCTGATAGTCCACCAATTCGAATGTTTCCAAACTTAACAACACCAGCGAACCCCAAAAAGTAGATGTTGGGTGCTGCCCATCCTCCATAATACAGTTCCCACAAATAATTGGATGCTTCGTGGTTTCCACCTATGAAGATTGTTGGGTATGGGGCAACAGCTTGTCCCGAGTAGTACTTCCAAAATGATTTCATTTCACGAAACCTTGGTTTGACATTAAGACACTGTAAATCATTCTCGTTCCTAACAGCCTGGAAGTCGCCGCAGCAGAGGAGGAGGTCGATCTTGACGCCCTCGGCCTTCTCGAGCTCGCGCAGCGTGTCGTAGACCTTGTCCAGCTCCCCGTGCATGCACCCCTCCACCGCGATCTTCATGGTGATGACCGCGCGAGCTGGCGGCGGCGCAGGCGGCGAGCGGCGGGAGCAGCCGACGAGAGGCTGAGCGACTCGAAGCTCCGGGGAGGAGAAGGGCACGGCCGCGCCGTCGCGGAGAATCTTGGGAATCGACGAGACGGACCAGGCCGAG]

[+] EMBL CF331622             [TTTTTTTTTTTTTTTTTTTTTTCCAGTTTGTACCCGTCGTTTGGTTGCCGAAAATACCTCGGATCATGAATAATGAGTTTTCTGGTTCAAAAAAAAAAAGGATTCATCACCTACCCTGCAAATCAAGTTAATCCCCCCAATGAAAGATCATTCGTCTACACATCCCATTCAATTTTTCTACACGTAACCAGCGTAAATTGTACTGTCTACAGGTCAGTTTCCCTAGCTCGTTCCGTTCCCTACAAAGCTAATGCCATGTACTTTCAGGCTTTCAGTTCTTCAGTCATCATCGTCCGCCGGATCATCTTCATCGTCAGGGAGCTCTATGTCGTCACTATCAAGTGCTTGTCCTGTCTGGGACCTTGACTCATTTCTACTAACCCCATAAAAATTTGATGAGTCCAAAAAATACGGGAGATTTAAAACCTGCAAAAAAAACTCAGTTTGTGGATTCCTACAATGAACTGTTATGGAGGGATTGGATGCTTGACAGGAAGGATCATAAAATGCACCAGTCTGGACAAAATCAATAGGTTTAGCCCCTCTGGCATTTAACTTGTTCCTAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL AK073636             [                                                                                                                          TCAAGTTAATACACACAATGAAAGATCATTCGTCTACACATCCCATTCAATTCTTCTACACGTAAGCAGCGTAAATTGTACTGTCTACAGGTCAGTTTCCCTAGCTCGTTCCGTTCCCTACAGAGCTAATGCCATGTACTTTCAGGCTTTCAGTTCTTCAGTCATCATCGTCCGCCGGATCATCTTCATCGTCAGGGAGCTCTATGTCGTCACTATCAAGTGCTTGTCCTGTCTGGGAGCTTGACTCATTTCTACTAACCCCATAAGAATTTGATGAGTCCAGAAGATACGGGAGATTTAGAAGCTGCAGAAAAGACTCAGTTTGTGGATTCCTACAATGAACTGTTATGGAGGGATTGGATGCTTGACAAGAAGGATCATAAGATGCAGCAGTCTGGACAAAATCAATAGGTTTAGCCCCTCTGGCATTTAACTTGTTCCTAACCCATTGCAAGTCATCTTGAGTGTCAACCTGTTCATCCAGCATTGTAAATGGCATCCGAGTTAAGGAGAAAACATTGTTGAATTTCCGTGTTATTGCAAGCCATTCTTCATCATACTGGATCTCATGTGGTCCTGGACCGGATGGAATGTCTATTACCTGGAGAAAGCCCCGCCGAGGAAGACATTTATCAAGTGCAAGAAACTTAGTTGTAGGCCCA CCCTCTCCATGTTGGATAACAGCTGGAAACTTACAATGAAGATGAGCTGAAAACCAGTATGGTGGTTTTAGTTTATTCAGTAGTCTTGCTGCTGGTTCGCTGCCTAGTGTTCTCTTGTTGACCTCTTCTTCAAAGAATCTTTTCTCCCGAATAAGCTTCTGCCAGTTTCCGTACTCAGTAATGCCCAGAGGCCAATCATGTGACATGAATATATCTAGAGGCTCCTTCACATGCATTAACTTGAGAACATCATAATGCCTTACATGGTACACTGACCTTATAGTGTTTTCATTGTATGGGGGCCTCTCATAGTGTCCTAAGTGATAATGTTGTTGCTTATATATTCCTGATAGTCCACCAATTCGAATGTTTCCAAACTTAACAACACCAGCGAACCCCAAAAAGTAGATGTTGGGTGCTGCCCATCCTCCATAATACAGTTCCCACAAATAATTGGATGCTTCGTGGTTTCCACCTATGAAGATTGTTGGGTATGGGGCAACAGCTTGTCCCGAGTAGTACTTCCAAAATGATTTCATTTCACGAAACCTTGGTTTGACATTAAGACACTGTAAATCATTCTCGTTCCTAACAGCCTGGAAGTCGCCGCAGCAGAGGAGGAGGTCGATCTTGACGCCCTCGGCCTTCTCGAGCTCGCGCAGCGTGTCGTAGACCTTGTCCAGCTCCCCGTGCATGCACCCCTCCACCGCGATCTTCATGGTGATGACCGCGCGAGCTGGCGGCGGCGCAGGCGGCGAGCGGCGGGAGCAGCCGACGAGAGGCTGAGCGACTCGAAGCTCCGGGGAGGAGAAGGGCACGGCCGCGCCGTCGCGGAGAATCTTGGGAATCGACGAGACGGACCAGGCCGAG]
[-] EMBL CF331621             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACATTTATCAAGTGCAAGAAACTTAGTTGTAGGCCCACCCCTCTCCATGTTGGATAACAGCTGGAAACTTACAATGAAGATGAGCTGAAAACCAGTATGGTGGTTTTAGTTTATTCAGTAGTCTTGCTGCTGGTTCGCTGCCTAGTGTTCTCTTGTTGACCTCTTCTTCAAAGAATCTTTTCTCCCGAATAAGCTTCTGCCAGTTTCCGTACTCAGTAGTGCCCAGAGGCCAATCATGTGACATGAATATATCTAGAGGCTCCTTCACATGCATTAACTTGAGAACATCATAATGCCTTACATGGTACACTGACCTTATAGTGTTTTCATTGTATGGGGGCCTCTCATAGTGTCCTAAGTGATAATGTTGTTGCTTATATATTCCTGATAGTCCACCAATTCGAATGTTCCCAAACTTAACAACACCAGCGAACCCCAAAAAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_8809#0 TTTTTTTTTTTTTTTTTTTTTTCCAGTTTGTACCCGTCGTTTGGTTGCCGAAAATACCTC GGATCATGAATAATGAGTTTTCTGGTTCAAAAAAAAAAAGGATTCATCACCTACCCTGCA AATCAAGTTAATCCCCCCAATGAAAGATCATTCGTCTACACATCCCATTCAATTTTTCTA CACGTAACCAGCGTAAATTGTACTGTCTACAGGTCAGTTTCCCTAGCTCGTTCCGTTCCC TACAAAGCTAATGCCATGTACTTTCAGGCTTTCAGTTCTTCAGTCATCATCGTCCGCCGG ATCATCTTCATCGTCAGGGAGCTCTATGTCGTCACTATCAAGTGCTTGTCCTGTCTGGGA CCTTGACTCATTTCTACTAACCCCATAAAAATTTGATGAGTCCAAAAAATACGGGAGATT TAAAACCTGCAAAAAAAACTCAGTTTGTGGATTCCTACAATGAACTGTTATGGAGGGATT GGATGCTTGACAGGAAGGATCATAAAATGCACCAGTCTGGACAAAATCAATAGGTTTAGC CCCTCTGGCATTTAACTTGTTCCTAACCCATTGCAAGTCATCTTGAGTGTCAACCTGTTC ATCCAGCATTGTAAATGGCATCCGAGTTAAGGAGAAAACATTGTTGAATTTCCGTGTTAT TGCAAGCCATTCTTCATCATACTGGATCTCATGTGGTCCTGGACCGGATGGAATGTCTAT TACCTGGAGAAAGCCCCGCCGAGGAAGACATTTATCAAGTGCAAGAAACTTAGTTGTAGG CCCACCCTCTCCATGTTGGATAACAGCTGGAAACTTACAATGAAGATGAGCTGAAAACCA GTATGGTGGTTTTAGTTTATTCAGTAGTCTTGCTGCTGGTTCGCTGCCTAGTGTTCTCTT GTTGACCTCTTCTTCAAAGAATCTTTTCTCCCGAATAAGCTTCTGCCAGTTTCCGTACTC AGTAATGCCCAGAGGCCAATCATGTGACATGAATATATCTAGAGGCTCCTTCACATGCAT TAACTTGAGAACATCATAATGCCTTACATGGTACACTGACCTTATAGTGTTTTCATTGTA TGGGGGCCTCTCATAGTGTCCTAAGTGATAATGTTGTTGCTTATATATTCCTGATAGTCC ACCAATTCGAATGTTTCCAAACTTAACAACACCAGCGAACCCCAAAAAGTAGATGTTGGG TGCTGCCCATCCTCCATAATACAGTTCCCACAAATAATTGGATGCTTCGTGGTTTCCACC TATGAAGATTGTTGGGTATGGGGCAACAGCTTGTCCCGAGTAGTACTTCCAAAATGATTT CATTTCACGAAACCTTGGTTTGACATTAAGACACTGTAAATCATTCTCGTTCCTAACAGC CTGGAAGTCGCCGCAGCAGAGGAGGAGGTCGATCTTGACGCCCTCGGCCTTCTCGAGCTC GCGCAGCGTGTCGTAGACCTTGTCCAGCTCCCCGTGCATGCACCCCTCCACCGCGATCTT CATGGTGATGACCGCGCGAGCTGGCGGCGGCGCAGGCGGCGAGCGGCGGGAGCAGCCGAC GAGAGGCTGAGCGACTCGAAGCTCCGGGGAGGAGAAGGGCACGGCCGCGCCGTCGCGGAG AATCTTGGGAATCGACGAGACGGACCAGGCCGAG



consensusID : consensus_8809#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1539
fasta sequence
                              [CAGTACTGGTTGATATTCCAGTTTGTACCCGTCGTTTGGTTGCCGAAGATACCTCGGATCATGAATAATGAGTTTTCTGGTTCAAAAAAAAAAAAAAGGATTCATCACCTAGCCTGCAAATCAAGTTAATACACACAATGAAAGATCATTCGTCTACACATCCCATTCAATTCTTCTACACGTAAGCAGCGTAAATTGTACTGTCTACAGGTCAGTTTCCCTAGCTCGTTCCGTTCCCTACAGAGCTAATGCCATGTACTTTCAGGCTTTCAGTTCTTCAGTCATCATCGTCCGCCGGATCATCTTCATCGTCAGGGAGCTCTATGTCGTCACTATCAAGTGCTTGTCCTGTCTGGGAGCTTGACTCATTTCTACTAACCCCATAAGAATTTGATGAGTCCAGAAGATACGGGAGATTTAGAAGCTGCAGAAAAGACTCAGTTTGTGGATTCCTACAATGAACTGTTATGGAGGGATTGGATGCTTGACAAGAAGGATCATAAGATGCAGCAGTCTGGACAAAATCAATAGGTTTAGCCCCTCTGGCATTTAACTTGTTCCTAACCCATTGCAAGTCATCTTGAGTGTCAACCTGTTCATCCAGCATTGTAAATGGCATCCGAGTTAAGGAGAAAACATTGTTGAATTTCCGTGTTATTGCAAGCCATTCTTCATCATACTGGATCTCATGTGGTCCTGGACCGGATGGAATGTCTATTACCTGGAGAAAGCCCCGCCGAGGAAGACATTTATCAAGTGCAAGAAACTTAGTTGTAGGCCCACCCTCTCCATGTTGGATAACAGCTGGAAACTTACAATGAAGATGAGCTGAAAACCAGTATGGTGGTTTTAGTTTATTCAGTAGTCTTGCTGCTGGTTCGCTGCCTAGTGTTCTCTTGTTGACCTCTTCTTCAAAGAATCTTTTCTCCCGAATAAGCTTCTGCCAGTTTCCGTACTCAGTAATGCCCAGAGGCCAATCATGTGACATGAATATATCTAGAGGCTCCTTCACATGCATTAACTTGAGAACATCATAATGCCTTACATGGTACACTGACCTTATAGTGTTTTCATTGTATGGGGGCCTCTCATAGTGTCCTAAGTGATAATGTTGTTGCTTATATATTCCTGATAGTCCACCAATTCGAATGTTTCCAAACTTAACAACACCAGCGAACCCCAAAAAGTAGATGTTGGGTATGGGGCAACAGCTTGTCCCGAGTAGTACTTCCAAAATGATTTCATTTCACGAAACCTTGGTTTGACATTAAGACACTGTAAATCATTCTCGTTCCTAACAGCCTGGAAGTCGCCGCAGCAGAGGAGGAGGTCGATCTTGACGCCCTCGGCCTTCTCGAGCTCGCGCAGCGTGTCGTAGACCTTGTCCAGCTCCCCGTGCATGCACCCCTCCACCGCGATCTTCATGGTGATGACCGCGCGAGCTGGCGGCGGCGCAGGCGGCGAGCGGCGGGAGCAGCCGACGAGAGGCTGAGCGACTCGAAGCTCCGGGGAGGAGAAGGGCACGGCCGCGCCGTCGCG]

[-] EMBL AK063969             [CAGTACTGGTTGATATTCCAGTTTGTACCCGTCGTTTGGTTGCCGAAGATACCTCGGATCATGAATAATGAGTTTTCTGGTTCAAAAAAAAAAAAAAGGATTCATCACCTAGCCTGCAAATCAAGTTAATACACACAATGAAAGATCATTCGTCTACACATCCCATTCAATTCTTCTACACGTAAGCAGCGTAAATTGTACTGTCTACAGGTCAGTTTCCCTAGCTCGTTCCGTTCCCTACAGAGCTAATGCCATGTACTTTCAGGCTTTCAGTTCTTCAGTCATCATCGTCCGCCGGATCATCTTCATCGTCAGGGAGCTCTATGTCGTCACTATCAAGTGCTTGTCCTGTCTGGGAGCTTGACTCATTTCTACTAACCCCATAAGAATTTGATGAGTCCAGAAGATACGGGAGATTTAGAAGCTGCAGAAAAGACTCAGTTTGTGGATTCCTACAATGAACTGTTATGGAGGGATTGGATGCTTGACAAGAAGGATCATAAGATGCAGCAGTCTGGACAAAATCAATAGGTTTAGCCCCTCTGGCATTTAACTTGTTCCTAACCCATTGCAAGTCATCTTGAGTGTCAACCTGTTCATCCAGCATTGTAAATGGCATCCGAGTTAAGGAGAAAACATTGTTGAATTTCCGTGTTATTGCAAGCCATTCTTCATCATACTGGATCTCATGTGGTCCTGGACCGGATGGAATGTCTATTACCTGGAGAAAGCCCCGCCGAGGAAGACATTTATCAAGTGCAAGAAACTTAGTTGTAGGCCCACCCTCTCCATGTTGGATAACAGCTGGAAACTTACAATGAAGATGAGCTGAAAACCAGTATGGTGGTTTTAGTTTATTCAGTAGTCTTGCTGCTGGTTCGCTGCCTAGTGTTCTCTTGTTGACCTCTTCTTCAAAGAATCTTTTCTCCCGAATAAGCTTCTGCCAGTTTCCGTACTCAGTAATGCCCAGAGGCCAATCATGTGACATGAATATATCTAGAGGCTCCTTCACATGCATTAACTTGAGAACATCATAATGCCTTACATGGTACACTGACCTTATAGTGTTTTCATTGTATGGGGGCCTCTCATAGTGTCCTAAGTGATAATGTTGTTGCTTATATATTCCTGATAGTCCACCAATTCGAATGTTTCCAAACTTAACAACACCAGCGAACCCCAAAAAGTAGATGTTGGGTATGGGGCAACAGCTTGTCCCGAGTAGTACTTCCAAAATGATTTCATTTCACGAAACCTTGGTTTGACATTAAGACACTGTAAATCATTCTCGTTCCTAACAGCCTGGAAGTCGCCGCAGCAGAGGAGGAGGTCGATCTTGACGCCCTCGGCCTTCTCGAGCTCGCGCAGCGTGTCGTAGACCTTGTCCAGCTCCCCGTGCATGCACCCCTCCACCGCGATCTTCATGGTGATGACCGCGCGAGCTGGCGGCGGCGCAGGCGGCGAGCGGCGGGAGCAGCCGACGAGAGGCTGAGCGACTCGAAGCTCCGGGGAGGAGAAGGGCACGGCCGCGCCGTCGCG]
[-] EMBL CA767280             [                                                                                       AAAAAAAAAAGGATTCNTCACCTAGCCTGCAAATCAAGTTAATACACNCAATGAAAGATCATTCGTCTACACATCCCATTCANTTNTTCTACACGTAAGCAGCGTAAATTGTACTGTCTACAGGTCAGTTTCCCTAGCTCGTTCCGTTCCCTACAGAGCTAATGCCATGTACTTTCAGGCTNTCAGTTCTTCAGTCATCATCGTCCGCCGGATCATCTTCATCGTCAGGGAGCTCTATGTCGTCACTATCAAGTGCTTGTCCTGTCTGGGAGCTTGACTCATTTCTACTAACCCCATAAGAATTTGATGAGTCCAGAAGATACGGGAGATTTAGAAGCTGCAGAAAAGNNTCAGTTTGTGGATTCCNACAATGAACTGTTATGGAGGGATTGGATGCTTGNCAAGAAGGATCATAAGATGCAGCAGTCTGGACAAAATCAATAGGTTTAGCCCCTCTGGCATTTAACTTGTTCCTAACCCATTGCAAGTCATCTTGAGTGTCANCCTGTTCATCCAGCANTGTAAATGGCATCCGAGTTAAGGGGAAAACATTGTTGAATTTCCGTGTTATTGCAAGCCATTCTTCATCATACTGGATCTCATGTGGTCCTGGNCCGGANGGAATGTCTATTACCTGGAGAAAGCac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]


>consensus_8809#1 CAGTACTGGTTGATATTCCAGTTTGTACCCGTCGTTTGGTTGCCGAAGATACCTCGGATC ATGAATAATGAGTTTTCTGGTTCAAAAAAAAAAAAAAGGATTCATCACCTAGCCTGCAAA TCAAGTTAATACACACAATGAAAGATCATTCGTCTACACATCCCATTCAATTCTTCTACA CGTAAGCAGCGTAAATTGTACTGTCTACAGGTCAGTTTCCCTAGCTCGTTCCGTTCCCTA CAGAGCTAATGCCATGTACTTTCAGGCTTTCAGTTCTTCAGTCATCATCGTCCGCCGGAT CATCTTCATCGTCAGGGAGCTCTATGTCGTCACTATCAAGTGCTTGTCCTGTCTGGGAGC TTGACTCATTTCTACTAACCCCATAAGAATTTGATGAGTCCAGAAGATACGGGAGATTTA GAAGCTGCAGAAAAGACTCAGTTTGTGGATTCCTACAATGAACTGTTATGGAGGGATTGG ATGCTTGACAAGAAGGATCATAAGATGCAGCAGTCTGGACAAAATCAATAGGTTTAGCCC CTCTGGCATTTAACTTGTTCCTAACCCATTGCAAGTCATCTTGAGTGTCAACCTGTTCAT CCAGCATTGTAAATGGCATCCGAGTTAAGGAGAAAACATTGTTGAATTTCCGTGTTATTG CAAGCCATTCTTCATCATACTGGATCTCATGTGGTCCTGGACCGGATGGAATGTCTATTA CCTGGAGAAAGCCCCGCCGAGGAAGACATTTATCAAGTGCAAGAAACTTAGTTGTAGGCC CACCCTCTCCATGTTGGATAACAGCTGGAAACTTACAATGAAGATGAGCTGAAAACCAGT ATGGTGGTTTTAGTTTATTCAGTAGTCTTGCTGCTGGTTCGCTGCCTAGTGTTCTCTTGT TGACCTCTTCTTCAAAGAATCTTTTCTCCCGAATAAGCTTCTGCCAGTTTCCGTACTCAG TAATGCCCAGAGGCCAATCATGTGACATGAATATATCTAGAGGCTCCTTCACATGCATTA ACTTGAGAACATCATAATGCCTTACATGGTACACTGACCTTATAGTGTTTTCATTGTATG GGGGCCTCTCATAGTGTCCTAAGTGATAATGTTGTTGCTTATATATTCCTGATAGTCCAC CAATTCGAATGTTTCCAAACTTAACAACACCAGCGAACCCCAAAAAGTAGATGTTGGGTA TGGGGCAACAGCTTGTCCCGAGTAGTACTTCCAAAATGATTTCATTTCACGAAACCTTGG TTTGACATTAAGACACTGTAAATCATTCTCGTTCCTAACAGCCTGGAAGTCGCCGCAGCA GAGGAGGAGGTCGATCTTGACGCCCTCGGCCTTCTCGAGCTCGCGCAGCGTGTCGTAGAC CTTGTCCAGCTCCCCGTGCATGCACCCCTCCACCGCGATCTTCATGGTGATGACCGCGCG AGCTGGCGGCGGCGCAGGCGGCGAGCGGCGGGAGCAGCCGACGAGAGGCTGAGCGACTCG AAGCTCCGGGGAGGAGAAGGGCACGGCCGCGCCGTCGCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8809#0      TTTTTTTTTTTTTTTTTTTTTTCCAGTTTGTACCCGTCGTTTGGTTGCCGAAAATACCTC 60
consensus_8809#1      -----CAGTACTGGTTGATATTCCAGTTTGTACCCGTCGTTTGGTTGCCGAAGATACCTC 55
                              *  *  **  * ******************************** *******

consensus_8809#0      GGATCATGAATAATGAGTTTTCTGGTTCAAAAAAAAAAA---GGATTCATCACCTACCCT 117
consensus_8809#1      GGATCATGAATAATGAGTTTTCTGGTTCAAAAAAAAAAAAAAGGATTCATCACCTAGCCT 115
                      ***************************************   ************** ***

consensus_8809#0      GCAAATCAAGTTAATCCCCCCAATGAAAGATCATTCGTCTACACATCCCATTCAATTTTT 177
consensus_8809#1      GCAAATCAAGTTAATACACACAATGAAAGATCATTCGTCTACACATCCCATTCAATTCTT 175
                      *************** * * ************************************* **

consensus_8809#0      CTACACGTAACCAGCGTAAATTGTACTGTCTACAGGTCAGTTTCCCTAGCTCGTTCCGTT 237
consensus_8809#1      CTACACGTAAGCAGCGTAAATTGTACTGTCTACAGGTCAGTTTCCCTAGCTCGTTCCGTT 235
                      ********** *************************************************

consensus_8809#0      CCCTACAAAGCTAATGCCATGTACTTTCAGGCTTTCAGTTCTTCAGTCATCATCGTCCGC 297
consensus_8809#1      CCCTACAGAGCTAATGCCATGTACTTTCAGGCTTTCAGTTCTTCAGTCATCATCGTCCGC 295
                      ******* ****************************************************

consensus_8809#0      CGGATCATCTTCATCGTCAGGGAGCTCTATGTCGTCACTATCAAGTGCTTGTCCTGTCTG 357
consensus_8809#1      CGGATCATCTTCATCGTCAGGGAGCTCTATGTCGTCACTATCAAGTGCTTGTCCTGTCTG 355
                      ************************************************************

consensus_8809#0      GGACCTTGACTCATTTCTACTAACCCCATAAAAATTTGATGAGTCCAAAAAATACGGGAG 417
consensus_8809#1      GGAGCTTGACTCATTTCTACTAACCCCATAAGAATTTGATGAGTCCAGAAGATACGGGAG 415
                      *** *************************** *************** ** *********

consensus_8809#0      ATTTAAAACCTGCAAAAAAAACTCAGTTTGTGGATTCCTACAATGAACTGTTATGGAGGG 477
consensus_8809#1      ATTTAGAAGCTGCAGAAAAGACTCAGTTTGTGGATTCCTACAATGAACTGTTATGGAGGG 475
                      ***** ** ***** **** ****************************************

consensus_8809#0      ATTGGATGCTTGACAGGAAGGATCATAAAATGCACCAGTCTGGACAAAATCAATAGGTTT 537
consensus_8809#1      ATTGGATGCTTGACAAGAAGGATCATAAGATGCAGCAGTCTGGACAAAATCAATAGGTTT 535
                      *************** ************ ***** *************************

consensus_8809#0      AGCCCCTCTGGCATTTAACTTGTTCCTAACCCATTGCAAGTCATCTTGAGTGTCAACCTG 597
consensus_8809#1      AGCCCCTCTGGCATTTAACTTGTTCCTAACCCATTGCAAGTCATCTTGAGTGTCAACCTG 595
                      ************************************************************

consensus_8809#0      TTCATCCAGCATTGTAAATGGCATCCGAGTTAAGGAGAAAACATTGTTGAATTTCCGTGT 657
consensus_8809#1      TTCATCCAGCATTGTAAATGGCATCCGAGTTAAGGAGAAAACATTGTTGAATTTCCGTGT 655
                      ************************************************************

consensus_8809#0      TATTGCAAGCCATTCTTCATCATACTGGATCTCATGTGGTCCTGGACCGGATGGAATGTC 717
consensus_8809#1      TATTGCAAGCCATTCTTCATCATACTGGATCTCATGTGGTCCTGGACCGGATGGAATGTC 715
                      ************************************************************

consensus_8809#0      TATTACCTGGAGAAAGCCCCGCCGAGGAAGACATTTATCAAGTGCAAGAAACTTAGTTGT 777
consensus_8809#1      TATTACCTGGAGAAAGCCCCGCCGAGGAAGACATTTATCAAGTGCAAGAAACTTAGTTGT 775
                      ************************************************************

consensus_8809#0      AGGCCCACCCTCTCCATGTTGGATAACAGCTGGAAACTTACAATGAAGATGAGCTGAAAA 837
consensus_8809#1      AGGCCCACCCTCTCCATGTTGGATAACAGCTGGAAACTTACAATGAAGATGAGCTGAAAA 835
                      ************************************************************

consensus_8809#0      CCAGTATGGTGGTTTTAGTTTATTCAGTAGTCTTGCTGCTGGTTCGCTGCCTAGTGTTCT 897
consensus_8809#1      CCAGTATGGTGGTTTTAGTTTATTCAGTAGTCTTGCTGCTGGTTCGCTGCCTAGTGTTCT 895
                      ************************************************************

consensus_8809#0      CTTGTTGACCTCTTCTTCAAAGAATCTTTTCTCCCGAATAAGCTTCTGCCAGTTTCCGTA 957
consensus_8809#1      CTTGTTGACCTCTTCTTCAAAGAATCTTTTCTCCCGAATAAGCTTCTGCCAGTTTCCGTA 955
                      ************************************************************

consensus_8809#0      CTCAGTAATGCCCAGAGGCCAATCATGTGACATGAATATATCTAGAGGCTCCTTCACATG 1017
consensus_8809#1      CTCAGTAATGCCCAGAGGCCAATCATGTGACATGAATATATCTAGAGGCTCCTTCACATG 1015
                      ************************************************************

consensus_8809#0      CATTAACTTGAGAACATCATAATGCCTTACATGGTACACTGACCTTATAGTGTTTTCATT 1077
consensus_8809#1      CATTAACTTGAGAACATCATAATGCCTTACATGGTACACTGACCTTATAGTGTTTTCATT 1075
                      ************************************************************

consensus_8809#0      GTATGGGGGCCTCTCATAGTGTCCTAAGTGATAATGTTGTTGCTTATATATTCCTGATAG 1137
consensus_8809#1      GTATGGGGGCCTCTCATAGTGTCCTAAGTGATAATGTTGTTGCTTATATATTCCTGATAG 1135
                      ************************************************************

consensus_8809#0      TCCACCAATTCGAATGTTTCCAAACTTAACAACACCAGCGAACCCCAAAAAGTAGATGTT 1197
consensus_8809#1      TCCACCAATTCGAATGTTTCCAAACTTAACAACACCAGCGAACCCCAAAAAGTAGATGTT 1195
                      ************************************************************

consensus_8809#0      GGGTGCTGCCCATCCTCCATAATACAGTTCCCACAAATAATTGGATGCTTCGTGGTTTCC 1257
consensus_8809#1      GGGT-------------------------------------------------------- 1199
                      ****                                                        

consensus_8809#0      ACCTATGAAGATTGTTGGGTATGGGGCAACAGCTTGTCCCGAGTAGTACTTCCAAAATGA 1317
consensus_8809#1      --------------------ATGGGGCAACAGCTTGTCCCGAGTAGTACTTCCAAAATGA 1239
                                          ****************************************

consensus_8809#0      TTTCATTTCACGAAACCTTGGTTTGACATTAAGACACTGTAAATCATTCTCGTTCCTAAC 1377
consensus_8809#1      TTTCATTTCACGAAACCTTGGTTTGACATTAAGACACTGTAAATCATTCTCGTTCCTAAC 1299
                      ************************************************************

consensus_8809#0      AGCCTGGAAGTCGCCGCAGCAGAGGAGGAGGTCGATCTTGACGCCCTCGGCCTTCTCGAG 1437
consensus_8809#1      AGCCTGGAAGTCGCCGCAGCAGAGGAGGAGGTCGATCTTGACGCCCTCGGCCTTCTCGAG 1359
                      ************************************************************

consensus_8809#0      CTCGCGCAGCGTGTCGTAGACCTTGTCCAGCTCCCCGTGCATGCACCCCTCCACCGCGAT 1497
consensus_8809#1      CTCGCGCAGCGTGTCGTAGACCTTGTCCAGCTCCCCGTGCATGCACCCCTCCACCGCGAT 1419
                      ************************************************************

consensus_8809#0      CTTCATGGTGATGACCGCGCGAGCTGGCGGCGGCGCAGGCGGCGAGCGGCGGGAGCAGCC 1557
consensus_8809#1      CTTCATGGTGATGACCGCGCGAGCTGGCGGCGGCGCAGGCGGCGAGCGGCGGGAGCAGCC 1479
                      ************************************************************

consensus_8809#0      GACGAGAGGCTGAGCGACTCGAAGCTCCGGGGAGGAGAAGGGCACGGCCGCGCCGTCGCG 1617
consensus_8809#1      GACGAGAGGCTGAGCGACTCGAAGCTCCGGGGAGGAGAAGGGCACGGCCGCGCCGTCGCG 1539
                      ************************************************************

consensus_8809#0      GAGAATCTTGGGAATCGACGAGACGGACCAGGCCGAG 1654
consensus_8809#1      -------------------------------------
                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)