cluster # 8810

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Oryza sativa
cluster # 8810 cluster # 8810 Sequences # 5 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8810#0 length = 2769 sequences # 4

consensus_8810#1 length = 621 sequences # 1

consensusID : consensus_8810#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2769
fasta sequence

                              [CGGCGACCACAGCAACAGGATGAAGCTGGTACAAAGGGAGGCGGAGAAGCTGGCGCTGCACAATGCAGGGTTTTTGGCCCAGAAGCGCCTCGCACGGGGGCTCCGCCTCAACTACACGGAGGCCGTCGCGCTCATCGCCGCCCAGATTCTTGAGTTTGTTCGTGATGGAGACAGAACTGTGACAGACTTGATGGACTTAGGAAAACAACTGCTGGGAAGGAGGCAAGTTCTTCCAGCTGTTCCACAACTTTTAGAAACTGTACAGGTTGAAGGAACATTTATGGATGGAACAAAACTAATTACTGTACATGATCCTATTTCTTCTGATGATGGAAATTTGGAGCTAGCACTGCATGGTTCTTTCCTCCCAGTACCTTCACTTGAAAAGTTTTCTTCGGTTGGTGTGGACGACTTTCCTGGCGAAGTACGTTTTTGCTCTGGTCACATAGTCCTCAATCTTCATCGCAGGGCTTTAACTCTGAAGGTTGTTAACAAGGCAGACAGACCTATTCAGATTGGGAGTCATTACCACTTCATAGAGGCCAATCCATACCTTGTTTTTGATAGACAAAGAGCTTATGGCATGAGACTGAACATACCAGCTGGCACAGCTGTCCGTTTTGAGCCAGGGGATGCAAAAACGGTTACACTTGTAAGCATTGGTGGTCGTAAAGTGATCAGGGGTGGAAATGGAATTGCTGATGGTGCTGTCAACAGATCTCAGCTTAATGAGGTAATGGAAAAGGTTATTGCAAATGGTTTTGGGCATGAAGATTATCCAGATTCAAGTGAAGGTATTATTGGTGATGGCACACATGACTACAGTGTTGATCATGAGAAATATGCAAGCATGTATGGGCCTACAACTGGTGACAAGATTAGACTTGGTGACACTGACCTTTTTGCGGAGATTGAAAAGGACTATGCCATCTATGGTGATGAGTGCATATTTGGAGGCGGAAAGGTTCTACGTGATGGAATGGGACAGTCGGCAGGGTATCCAGCCTCAGATTGCCTGGACACAGTTGTAACAAATGCTGTTGTGATTGACTATACAGGAATATACAAAGCTGACATTGGTATAAATGGTGGACTTATCGTTGCTATTGGGAAGGCTGGAAACCCTGATGTCATGGACATGGATGGTGTTAATGAAGAGATGATTGTGGGGGTTAATACTGAAGTTATTGCTGCTGAAGGCATGATTGTTACTGCTGGTGGAATTGATTGCCATGTTCACTTCATATGCCCTCAGTTGGCAGAAGAGGCAATTGCAAGTGGCATCACAACATTGGTGGGAGGTGGAACTGGACCAGCACATGGAACTTGTGCCACAACTTGCACCCCTTCACCATCTCACATGAAACTAATGCTACAGTCCACTGATGAATTACCAATCAATATGGGATTCACAGGCAAGGGAAATACTACAAAACCTGATGGATTGGCTGAGATCATTAAGGCAGGAGCAATGGGCTTGAAGTTGCATGAAGATTGGGGAAGCACCCCAGCTGCGATAGATAACTGTTTATCTGTCGCAGAAGCTTTTGATATCCAGGTAAATATCCACACAGACACCTTAAATGAGTCAGGCTGTGTGGAGCATACAATTGCCGCATTTAAAGATAGGACAATACATACATATCATAGTGAAGGAGCAGGTGGTGGTCATGCTCCAGACATTATCAAAGTATGTGGAGTGAAAAATGTGTTACCCTCTTCAACAAATCCAACTCGGCCATTTACTTTGAACACTGTAGATGAGCACCTTGATATGCTGATGGTCTGCCATCACCTCGATAGAAATATCCCAGAAGATGTAGCATTTGCCGAGTCTAGAATTCGAGCTGAAACAATAGCTGCTGAGGATATCTTGCATGACATGGGAGCAATCAGTATCATATCATCCGATTCGCAGGCTATGGGGCGCATTGGAGAGGTGATTACTCGGACATGGCAAACTGCAAATAAGATGAAGAGACAGAGAGGTAGATTACCTATATCCAGTTCCCCCGATGCTGCAGAGGACAATGACAATTTCCGGATAAGAAGATACATAGCTAAATACACCATAAATCCTGCTATAGTGAATGGCTTTTCTGATTTTGTTGGCTCTGTTGAGGTGGGAAAATTAGCTGACCTTGTTATTTGGAAACCTTCTTTCTTTGGAGCAAAACCAGAAATGGTTATAAAGGGTGGTGCTATTGCATGCGCTAATATGGGTGATCCAAATGCTAGCATTCCAACACCTGAACCGGTTATGATGCGACCTATGTTTGGTGCATTTGGAGGGGCTGGAAGTGCCAACTCTATAGCATTTGTGAGCAAGGCTGCTAAAGAAGCTGGCGTTGCAGTGCAGTACAAGCTGGGAAAGAGGGTGGAAGCTGTAGGTCGCGTTCGTGGTTTGACAAAGCTGAATATGAAGCTAAACGATGCACTTCCGAAAATTGATGTCGATCCTGAAACCTACACGGTTACTGCTGATGGAGAGGTTTTGAGATGTCAACCAACACCCACAGTACCACTATCTCGGAATTACTTCCTCTTTTAGACAACTTTAGTGAACCAGCCTTTCTTAATTAGGGTTAATGCATGCATTTGGTCTCTCTCTTGTATCCTTTTCAATAATATGACTTGTAAACTTAAAGCTTTTTATGTGAGTTTTCCTTCACAGGTGCAATAAGGATAACTTTTGGCCGTAATGCTTGATTTGAATACACTTGTGTTATCTTCATGCTTTATTATATAATCAAGTTTATAAAAAAAAGA]

[+] EMBL AK069176             [CGGCGACCACAGCAACAGGATGAAGCTGGTACAAAGGGAGGCGGAGAAGCTGGCGCTGCACAATGCAGGGTTTTTGGCCCAGAAGCGCCTCGCACGGGGGCTCCGCCTCAACTACACGGAGGCCGTCGCGCTCATCGCCGCCCAGATTCTTGAGTTTGTTCGTGATGGAGACAGAACTGTGACAGACTTGATGGACTTAGGAAAACAACTGCTGGGAAGGAGGCAAGTTCTTCCAGCTGTTCCACAACTTTTAGAAACTGTACAGGTTGAAGGAACATTTATGGATGGAACAAAACTAATTACTGTACATGATCCTATTTCTTCTGATGATGGAAATTTGGAGCTAGCACTGCATGGTTCTTTCCTCCCAGTACCTTCACTTGAAAAGTTTTCTTCGGTTGGTGTGGACGACTTTCCTGGCGAAGTACGTTTTTGCTCTGGTCACATAGTCCTCAATCTTCATCGCAGGGCTTTAACTCTGAAGGTTGTTAACAAGGCAGACAGACCTATTCAGATTGGGAGTCATTACCACTTCATAGAGGCCAATCCATACCTTGTTTTTGATAGACAAAGAGCTTATGGCATGAGACTGAACATACCAGCTGGCACAGCTGTCCGTTTTGAGCCAGGGGATGCAAAAACGGTTACACTTGTAAGCATTGGTGGTCGTAAAGTGATCAGGGGTGGAAATGGAATTGCTGATGGTGCTGTCAACAGATCTCAGCTTAATGAGGTAATGGAAAAGGTTATTGCAAATGGTTTTGGGCATGAAGATTATCCAGATTCAAGTGAAGGTATTATTGGTGATGGCACACATGACTACAGTGTTGATCATGAGAAATATGCAAGCATGTATGGGCCTACAACTGGTGACAAGATTAGACTTGGTGACACTGACCTTTTTGCGGAGATTGAAAAGGACTATGCCATCTATGGTGATGAGTGCATATTTGGAGGCGGAAAGGTTCTACGTGATGGAATGGGACAGTCGGCAGGGTATCCAGCCTCAGATTGCCTGGACACAGTTGTAACAAATGCTGTTGTGATTGACTATACAGGAATATACAAAGCTGACATTGGTATAAATGGTGGACTTATCGTTGCTATTGGGAAGGCTGGAAACCCTGATGTCATGGACATGGATGGTGTTAATGAAGAGATGATTGTGGGGGTTAATACTGAAGTTATTGCTGCTGAAGGCATGATTGTTACTGCTGGTGGAATTGATTGCCATGTTCACTTCATATGCCCTCAGTTGGCAGAAGAGGCAATTGCAAGTGGCATCACAACATTGGTGGGAGGTGGAACTGGACCAGCACATGGAACTTGTGCCACAACTTGCACCCCTTCACCATCTCACATGAAACTAATGCTACAGTCCACTGATGAATTACCAATCAATATGGGATTCACAGGCAAGGGAAATACTACAAAACCTGATGGATTGGCTGAGATCATTAAGGCAGGAGCAATGGGCTTGAAGTTGCATGAAGATTGGGGAAGCACCCCAGCTGCGATAGATAACTGTTTATCTGTCGCAGAAGCTTTTGATATCCAGGTAAATATCCACACAGACACCTTAAATGAGTCAGGCTGTGTGGAGCATACAATTGCCGCATTTAAAGATAGGACAATACATACATATCATAGTGAAGGAGCAGGTGGTGGTCATGCTCCAGACATTATCAAAGTATGTGGAGTGAAAAATGTGTTACCCTCTTCAACAAATCCAACTCGGCCATTTACTTTGAACACTGTAGATGAGCACCTTGATATGCTGATGGTCTGCCATCACCTCGATAGAAATATCCCAGAAGATGTAGCATTTGCCGAGTCTAGAATTCGAGCTGAAACAATAGCTGCTGAGGATATCTTGCATGACATGGGAGCAATCAGTATCATATCATCCGATTCGCAGGCTATGGGGCGCATTGGAGAGGTGATTACTCGGACATGGCAAACTGCAAATAAGATGAAGAGACAGAGAGGTAGATTACCTATATCCAGTTCCCCCGATGCTGCAGAGGACAATGACAATTTCCGGATAAGAAGATACATAGCTAAATACACCATAAATCCTGCTATAGTGAATGGCTTTTCTGATTTTGTTGGCTCTGTTGAGGTGGGAAAATTAGCTGACCTTGTTATTTGGAAACCTTCTTTCTTTGGAGCAAAACCAGAAATGGTTATAAAGGGTGGTGCTATTGCATGCGCTAATATGGGTGATCCAAATGCTAGCATTCCAACACCTGAACCGGTTATGATGCGACCTATGTTTGGTGCATTTGGAGGGGCTGGAAGTGCCAACTCTATAGCATTTGTGAGCAAGGCTGCTAAAGAAGCTGGCGTTGCAGTGCAGTACAAGCTGGGAAAGAGGGTGGAAGCTGTAGGTCGCGTTCGTGGTTTGACAAAGCTGAATATGAAACTAAACGATGCACTTCCGAAAATTGATGTCGATCCTGAAACCTACACGGTTACTGCTGATGGAGAGGTTTTGAGATGTCAACCAACACCCACAGTACCACTATCTCGGAATTACTTCCTCTTTTAGACAACTTTAGTGAACCAGCCTTTCTTAATTAGGGTTAATGCATGCATTTGGTCTCTCTCTTGTATCCTTTTCAATAATATGACTTGTAAACTTAAAGCTTTTTATGTGAGTTTTCCTTCACAGGTGCAATAAGGATAAC                                                                               ]
[+] EMBL AB075476             [                     GAAGCTGGAACAAAGGGAGGCGGAGAAGCTGGCGCTGCACAATGCAGGGTTTTTGGCCCAGAAGCGCCTCGCACGGGGGCTCCGCCTCAACTACACGGAGGCCGTCGCGCTCATCGCCGCCCAGATTCTTGAGTTTGTTCGTGATGGAGACAGAACTGTGACAGACTTGATGGACTTAGGAAAACAACTGCTGGGAAGGAGGCAAGTTCTTCCAGCTGTTCCACACCTTTTAGAAACTGTACAGGTTGAAGGAACATTTATGGATGGAACAAAACTAATTACTGTACATGATCCTATTTCTTCTGATGATGGAAATTTGGAGCTAGCACTGCATGGTTCTTTCCTCCCAGTACCTTCACTTGAAAAGTTTTCTTCGGTTGGTGTGGACGACTTTCCTGGCGAAGTACGTTTTTGCTCTGGTCACATAGTCCTCAATCTTCATCGCAGGGCTTTAACTCTGAAGGTTGTTAACAAGGCAGACAGACCTATTCAGATTGGGAGTCATTACCACTTCATAGAGGCCAATCCATACCTTGTTTTTGATAGACAAAGAGCTTATGGCATGAGACTGAACATACCAGCTGGTACAGCTGTCCGTTTTGAGCCAGGGGATGCAAAAACGGTTACACTTGTAAGCATTGGTGGTCGTAAAGTGATCAGGGGTGGAAATGGAATTGCTGATGGTGCTGTCAACAGATCTCAGCTTAATGAGGTAATGGAAAAGGTTATTGCAAATGGTTTTGGGCATGAAGATTATCCAGATTCAAGTGAAGGTATTATTGGTGATGGCACACATGACTACAGTGTTGATCATGAGAAATATGCAAGCATGTATGGGCCTACAACTGGTGACAAGATTAGACTTGGTGACACTGACCTTTTTGCGGAGATTGAAAAGGACTATGCCATCTATGGTGATGAGTGCATATTTGGAGGCGGAAAGGTTCTACGTGATGGAATGGGACAGTCGGCAGGGTATCCAGCCTCAGATTGCCTGGACACAGTTGTAACAAATGCTGTTGTGATTGACTATACAGGAATATACAAAGCTGACATTGGTATAAATGGTGGACTTATCGTTGCTATTGGGAAGGCTGGAAACCCTGATGTCATGGACATGGATGGTGTTAATGAAGAGATGATTGTGGGGGTTAATACTGAAGTTATTGCTGCTGAAGGCATGATTGTTACTGCTGGTGGAATTGATTGCCATGTTCACTTCATATGCCCTCAGTTGGCAGAAGAGGCAATTGCAAGTGGCATCACAACATTGGTGGGAGGTGGAACTGGACCAGCACATGGAACTTGTGCCACAACTTGCACCCCTTCACCATCTCACATGAAACTAATGCTACAGTCCACTGATGAATTACCAATCAATATGGGATTCACAGGCAAGGGAAATACTACAAAACCTGATGGATTGGCTGAGATCATTAAGGCAGGAGCAATGGGCTTGAAGTTGCATGAAGATTGGGGAAGCACCCCAGCTGCGATAGATAACTGTTTATCTGTCGCAGAAGCTTTTGATATCCAGGTAAATATCCACACAGACACCTTAAATGAGTCAGGCTGTGTGGAGCATACAATTGCCGCATTTAAAGATAGGACAATACATACATATCATAGTGAAGGAGCAGGTGGTGGTCATGCTCCAGACATTATCAAAGTATGTGGAGTGAAAAATGTGTTACCCTCTTCAACAAATCCAACTCGGCCATTTACTTTGAACACTGTAGATGAGCACCTTGATATGCTGATGGTCTGCCATCACCTCGATAGAAATATCCCAGAAGATGTAGCATTTGCCGAGTCTAGAATTCGAGCTGAAACAATAGCTGCTGAGGATATCTTGCATGACATGGGAGCAATCAGTATCATATCATCCGATTCGCAGGCTATGGGGCGCATTGGAGAGGTGATTACTCGGACATGGCAAACTGCAAATAAGATGAAGAGACAGAGAGGTAGATTACCTATATCCAGTTCCCCCGATGCTGCAGAGGACAATGACAATTTCCGGATAAGAAGATACATAGCTAAATACACCATAAATCCTGCTATAGTGAATGGCTTTTCTGATTTTGTTGGCTCTGTTGAGGTGGGAAAATTAGCTGACCTTGTTATTTGGAAACCTTCTTTCTTTGGAGCAAAACCAGAAATGGTTATAAAGGGTGGTGCTATTGCATGCGCTAATATGGGTGATCCAAATGCTAGCATTCCAACACCTGAACCGGTTATGATGCGACCTATGTTTGGTGCATTTGGAGGGGCTGGAAGTGCCAACTCTATAGCATTTGTGAGCAAGGCTGCTAAAGAAGCTGGCGTTGCAGTGCAGTACAAGCTGGGAAAGAGGGTGGAAGCTGTAGGTCGCGTTCGTGGTTTGACAAAGCTGAATATGAAGCTAAACGATGCACTTCCGAAAATTGATGTCGATCCTGAAACCTACACGGTTACTGCTGATGGAGAGGTTTTGAGATGTCAACCAACACCCACAGTACCACTATCTCGGAATTACTTCCTCTTTTAGACAACTTTAGTGAACCAGCCTTTCTTAATTAGGGTTAATGC                                                                                                                                                                                 ]
[+] EMBL CB621674             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCGCCTTGAGACAGGGGATGCAAAAACGGTTACACTTGTAAGCATTGGTGGTCGTAAAGTGATCAGGGGTGGAAATGGAATTGCTGATGGTGCTGTCAACAGATCTCAGCTTAATGAGGTAATGGAAAAGGTTATTGCAAATGGTTTTGGGCATGAAGATTATCCAGATTCAAGTGAAGGTATTATTGGTGATGGCACACATGACTACAGTGTTGATCATGAGAAATATGCAAGCATGTATGGGCCTACAACTGGTGACAAGATTAGACTTGGTGACACTGACCTTTTTGCGGAGATTGAAAAGGACTATGCCATCTATGGTGATGAGTGCATATTTGGAGGCGGAAAGGTTCTACGTGACGGAATGGGACAGTCGGCAGGGTATCCAGCCTCAGATTGCCTGGACACAGTTGTAACAAATGCTGTTGTGATTGACTATACAGGAATATACAAAGCTGACATTGGTATAAATGGTGGACTTATCGTTGCTATTGGGAAGGCTGGAAACCCTGATGTCATGGACATGGATGGTGTTAATGAAGAGATGATTGTGGGGGTTAATACTGAAGTTATTGCTGCTGAAGGCATGATTGTTACTGCTGGTGGAATTGATTGCCATGTTCACTTCATATGCCCTCAATTGGCAGAAGAGGCAATTGCAAGTGGCATCACAACATTGGTGGGAGGTGGAACTGGACCAGCACATGGAACTTGTGCCACAACTTGCACCCCTTCACCATCTCACATGAAACTAATGCTACAGTCCACTGATGAATTACNCATCAATATGGGATTCACAGGCAAGGGAAATACTACAAAACCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB621675             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACTGCAAATAAGATGAAGAGACAGAGAGGTAGATTACCTATATCCAGTTCCCCCGATGCTGCAGAGGACAATGACAATTTCCGGATAAGAAGATACATAGCTAAATACACCATAAATCCTGCTATAGTGAATGGCTTTTCTGATTTTGTTGGCTCTGTTGAGGTGGGAAAATTAGCTGACCTTGTTATTTGGAAACCTTCTTTCTTTGGAGCAAAACCAGAAATGGTTATAAAGGGTGGTGCTATTGCATGCGCTAATATGGGTGATCCAAATGCTAGCATTCCAACACCTGAACCGGTTATGATGCGACCTATGTTTGGTGCATTTGGAGGGGCTGGAAGTGCCAACTCTATAGCATTTGTGAGCAAGGCTGCTAAAGAAGCTGGCGTTGCAGTGCAGTACAAGCTGGGAAAGAGGGTGGAAGCTGTAGGTCGCGTTCGTGGTTTGACAAAGCTGAATATGAAGCTAAACGATGCACTTCCGAAAATTGATGTCGATCCTGAAACCTACACGGTTACTGCTGATGGAGAGGTTTTGAGATGTCAACCAACACCCACAGTACCACTATCTCGGAATTACTTCCTCTTTTAGACAACTTTAGTGAACCAGCCTTTCTTAATTAGGGTTAATGCATGCATTTGGTCTCTCTCTTGTATCCTTTTCAATAATATGACTTGTAAACTTAAAGCTTTTTATGGGAGTTTTCCTTCACAGGTGCAATAAGGATAACTTTTGGCCGTAATGCTTGATTTGAATACACTTGTGTTATCTTCATGCTTTATTATATAATCAAGTTTATAAAAAAAAGA]




>consensus_8810#0
CGGCGACCACAGCAACAGGATGAAGCTGGTACAAAGGGAGGCGGAGAAGCTGGCGCTGCA
CAATGCAGGGTTTTTGGCCCAGAAGCGCCTCGCACGGGGGCTCCGCCTCAACTACACGGA
GGCCGTCGCGCTCATCGCCGCCCAGATTCTTGAGTTTGTTCGTGATGGAGACAGAACTGT
GACAGACTTGATGGACTTAGGAAAACAACTGCTGGGAAGGAGGCAAGTTCTTCCAGCTGT
TCCACAACTTTTAGAAACTGTACAGGTTGAAGGAACATTTATGGATGGAACAAAACTAAT
TACTGTACATGATCCTATTTCTTCTGATGATGGAAATTTGGAGCTAGCACTGCATGGTTC
TTTCCTCCCAGTACCTTCACTTGAAAAGTTTTCTTCGGTTGGTGTGGACGACTTTCCTGG
CGAAGTACGTTTTTGCTCTGGTCACATAGTCCTCAATCTTCATCGCAGGGCTTTAACTCT
GAAGGTTGTTAACAAGGCAGACAGACCTATTCAGATTGGGAGTCATTACCACTTCATAGA
GGCCAATCCATACCTTGTTTTTGATAGACAAAGAGCTTATGGCATGAGACTGAACATACC
AGCTGGCACAGCTGTCCGTTTTGAGCCAGGGGATGCAAAAACGGTTACACTTGTAAGCAT
TGGTGGTCGTAAAGTGATCAGGGGTGGAAATGGAATTGCTGATGGTGCTGTCAACAGATC
TCAGCTTAATGAGGTAATGGAAAAGGTTATTGCAAATGGTTTTGGGCATGAAGATTATCC
AGATTCAAGTGAAGGTATTATTGGTGATGGCACACATGACTACAGTGTTGATCATGAGAA
ATATGCAAGCATGTATGGGCCTACAACTGGTGACAAGATTAGACTTGGTGACACTGACCT
TTTTGCGGAGATTGAAAAGGACTATGCCATCTATGGTGATGAGTGCATATTTGGAGGCGG
AAAGGTTCTACGTGATGGAATGGGACAGTCGGCAGGGTATCCAGCCTCAGATTGCCTGGA
CACAGTTGTAACAAATGCTGTTGTGATTGACTATACAGGAATATACAAAGCTGACATTGG
TATAAATGGTGGACTTATCGTTGCTATTGGGAAGGCTGGAAACCCTGATGTCATGGACAT
GGATGGTGTTAATGAAGAGATGATTGTGGGGGTTAATACTGAAGTTATTGCTGCTGAAGG
CATGATTGTTACTGCTGGTGGAATTGATTGCCATGTTCACTTCATATGCCCTCAGTTGGC
AGAAGAGGCAATTGCAAGTGGCATCACAACATTGGTGGGAGGTGGAACTGGACCAGCACA
TGGAACTTGTGCCACAACTTGCACCCCTTCACCATCTCACATGAAACTAATGCTACAGTC
CACTGATGAATTACCAATCAATATGGGATTCACAGGCAAGGGAAATACTACAAAACCTGA
TGGATTGGCTGAGATCATTAAGGCAGGAGCAATGGGCTTGAAGTTGCATGAAGATTGGGG
AAGCACCCCAGCTGCGATAGATAACTGTTTATCTGTCGCAGAAGCTTTTGATATCCAGGT
AAATATCCACACAGACACCTTAAATGAGTCAGGCTGTGTGGAGCATACAATTGCCGCATT
TAAAGATAGGACAATACATACATATCATAGTGAAGGAGCAGGTGGTGGTCATGCTCCAGA
CATTATCAAAGTATGTGGAGTGAAAAATGTGTTACCCTCTTCAACAAATCCAACTCGGCC
ATTTACTTTGAACACTGTAGATGAGCACCTTGATATGCTGATGGTCTGCCATCACCTCGA
TAGAAATATCCCAGAAGATGTAGCATTTGCCGAGTCTAGAATTCGAGCTGAAACAATAGC
TGCTGAGGATATCTTGCATGACATGGGAGCAATCAGTATCATATCATCCGATTCGCAGGC
TATGGGGCGCATTGGAGAGGTGATTACTCGGACATGGCAAACTGCAAATAAGATGAAGAG
ACAGAGAGGTAGATTACCTATATCCAGTTCCCCCGATGCTGCAGAGGACAATGACAATTT
CCGGATAAGAAGATACATAGCTAAATACACCATAAATCCTGCTATAGTGAATGGCTTTTC
TGATTTTGTTGGCTCTGTTGAGGTGGGAAAATTAGCTGACCTTGTTATTTGGAAACCTTC
TTTCTTTGGAGCAAAACCAGAAATGGTTATAAAGGGTGGTGCTATTGCATGCGCTAATAT
GGGTGATCCAAATGCTAGCATTCCAACACCTGAACCGGTTATGATGCGACCTATGTTTGG
TGCATTTGGAGGGGCTGGAAGTGCCAACTCTATAGCATTTGTGAGCAAGGCTGCTAAAGA
AGCTGGCGTTGCAGTGCAGTACAAGCTGGGAAAGAGGGTGGAAGCTGTAGGTCGCGTTCG
TGGTTTGACAAAGCTGAATATGAAGCTAAACGATGCACTTCCGAAAATTGATGTCGATCC
TGAAACCTACACGGTTACTGCTGATGGAGAGGTTTTGAGATGTCAACCAACACCCACAGT
ACCACTATCTCGGAATTACTTCCTCTTTTAGACAACTTTAGTGAACCAGCCTTTCTTAAT
TAGGGTTAATGCATGCATTTGGTCTCTCTCTTGTATCCTTTTCAATAATATGACTTGTAA
ACTTAAAGCTTTTTATGTGAGTTTTCCTTCACAGGTGCAATAAGGATAACTTTTGGCCGT
AATGCTTGATTTGAATACACTTGTGTTATCTTCATGCTTTATTATATAATCAAGTTTATA
AAAAAAAGA

consensusID : consensus_8810#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 621
fasta sequence

                              [GGGGGGGAAAAACTTGCTAACTGATCATACTTCTCTTCAGTTTTTCTATTCATAATTTTTTTGTTTTTTTTTCAGGTGGGAAAATTAGCTGACCTTGTTATTTGGAAACCTTCTTTCTTTGGAGCAAAACCAGAAATGGTTATAAAGGGTGGTGCTATTGCATGCGCTAATATGGGTGATCCAAATGCTAGCATTCCAACACCTGAACCGGTTATGATGCGACCTATGTTTGGTGCATTTGGAGGGGCTGGAAGTGCCAACTCTATAGCATTTGTGAGCAAGGCTGCTAAAGAAGCTGGCGTTGCAGTGCAGTACAAGCTGGGAAAGAGGGTGGAAGCTGTAGGTCGCGTTCGTGGTTTGACAAAGCTGAATATGAAGCTAAACGATGCACTTCCGAAAATTGATGTCGATCCTGAAACCTACACGGTTACTGCTGATGGAGAGGTTTTGAGATGTCAACCAACACCCACAGTACCACTATCTCGGAATTACTTCCTCTTTTAGACAACTTTAGTGAACCAGCCTTTCTTAATTAGGGTTAATGCATGCATTTGGTCTCTCTCTTGTATCCTTTTCAATAATATGACTTGTAAACTTAAAGCTTTTTATGGGAGTTTTCCT]

[+] EMBL CA764290             [GGGGGGGAAAAACTTGCTAACTGATCATACTTCTCTTCAGTTTTTCTATTCATAATTTTTTTGTTTTTTTTTCAGGTGGGAAAATTAGCTGACCTTGTTATTTGGAAACCTTCTTTCTTTGGAGCAAAACCAGAAATGGTTATAAAGGGTGGTGCTATTGCATGCGCTAATATGGGTGATCCAAATGCTAGCATTCCAACACCTGAACCGGTTATGATGCGACCTATGTTTGGTGCATTTGGAGGGGCTGGAAGTGCCAACTCTATAGCATTTGTGAGCAAGGCTGCTAAAGAAGCTGGCGTTGCAGTGCAGTACAAGCTGGGAAAGAGGGTGGAAGCTGTAGGTCGCGTTCGTGGTTTGACAAAGCTGAATATGAAGCTAAACGATGCACTTCCGAAAATTGATGTCGATCCTGAAACCTACACGGTTACTGCTGATGGAGAGGTTTTGAGATGTCAACCAACACCCACAGTACCACTATCTCGGAATTACTTCCTCTTTTAGACAACTTTAGTGAACCAGCCTTTCTTAATTAGGGTTAATGCATGCATTTGGTCTCTCTCTTGTATCCTTTTCAATAATATGACTTGTAAACTTAAAGCTTTTTATGGGAGTTTTCCT]




>consensus_8810#1
GGGGGGGAAAAACTTGCTAACTGATCATACTTCTCTTCAGTTTTTCTATTCATAATTTTT
TTGTTTTTTTTTCAGGTGGGAAAATTAGCTGACCTTGTTATTTGGAAACCTTCTTTCTTT
GGAGCAAAACCAGAAATGGTTATAAAGGGTGGTGCTATTGCATGCGCTAATATGGGTGAT
CCAAATGCTAGCATTCCAACACCTGAACCGGTTATGATGCGACCTATGTTTGGTGCATTT
GGAGGGGCTGGAAGTGCCAACTCTATAGCATTTGTGAGCAAGGCTGCTAAAGAAGCTGGC
GTTGCAGTGCAGTACAAGCTGGGAAAGAGGGTGGAAGCTGTAGGTCGCGTTCGTGGTTTG
ACAAAGCTGAATATGAAGCTAAACGATGCACTTCCGAAAATTGATGTCGATCCTGAAACC
TACACGGTTACTGCTGATGGAGAGGTTTTGAGATGTCAACCAACACCCACAGTACCACTA
TCTCGGAATTACTTCCTCTTTTAGACAACTTTAGTGAACCAGCCTTTCTTAATTAGGGTT
AATGCATGCATTTGGTCTCTCTCTTGTATCCTTTTCAATAATATGACTTGTAAACTTAAA
GCTTTTTATGGGAGTTTTCCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8810#0      CGGCGACCACAGCAACAGGATGAAGCTGGTACAAAGGGAGGCGGAGAAGCTGGCGCTGCA 60
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      CAATGCAGGGTTTTTGGCCCAGAAGCGCCTCGCACGGGGGCTCCGCCTCAACTACACGGA 120
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      GGCCGTCGCGCTCATCGCCGCCCAGATTCTTGAGTTTGTTCGTGATGGAGACAGAACTGT 180
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      GACAGACTTGATGGACTTAGGAAAACAACTGCTGGGAAGGAGGCAAGTTCTTCCAGCTGT 240
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      TCCACAACTTTTAGAAACTGTACAGGTTGAAGGAACATTTATGGATGGAACAAAACTAAT 300
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      TACTGTACATGATCCTATTTCTTCTGATGATGGAAATTTGGAGCTAGCACTGCATGGTTC 360
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      TTTCCTCCCAGTACCTTCACTTGAAAAGTTTTCTTCGGTTGGTGTGGACGACTTTCCTGG 420
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      CGAAGTACGTTTTTGCTCTGGTCACATAGTCCTCAATCTTCATCGCAGGGCTTTAACTCT 480
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      GAAGGTTGTTAACAAGGCAGACAGACCTATTCAGATTGGGAGTCATTACCACTTCATAGA 540
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      GGCCAATCCATACCTTGTTTTTGATAGACAAAGAGCTTATGGCATGAGACTGAACATACC 600
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      AGCTGGCACAGCTGTCCGTTTTGAGCCAGGGGATGCAAAAACGGTTACACTTGTAAGCAT 660
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      TGGTGGTCGTAAAGTGATCAGGGGTGGAAATGGAATTGCTGATGGTGCTGTCAACAGATC 720
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      TCAGCTTAATGAGGTAATGGAAAAGGTTATTGCAAATGGTTTTGGGCATGAAGATTATCC 780
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      AGATTCAAGTGAAGGTATTATTGGTGATGGCACACATGACTACAGTGTTGATCATGAGAA 840
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      ATATGCAAGCATGTATGGGCCTACAACTGGTGACAAGATTAGACTTGGTGACACTGACCT 900
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      TTTTGCGGAGATTGAAAAGGACTATGCCATCTATGGTGATGAGTGCATATTTGGAGGCGG 960
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      AAAGGTTCTACGTGATGGAATGGGACAGTCGGCAGGGTATCCAGCCTCAGATTGCCTGGA 1020
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      CACAGTTGTAACAAATGCTGTTGTGATTGACTATACAGGAATATACAAAGCTGACATTGG 1080
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      TATAAATGGTGGACTTATCGTTGCTATTGGGAAGGCTGGAAACCCTGATGTCATGGACAT 1140
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      GGATGGTGTTAATGAAGAGATGATTGTGGGGGTTAATACTGAAGTTATTGCTGCTGAAGG 1200
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      CATGATTGTTACTGCTGGTGGAATTGATTGCCATGTTCACTTCATATGCCCTCAGTTGGC 1260
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      AGAAGAGGCAATTGCAAGTGGCATCACAACATTGGTGGGAGGTGGAACTGGACCAGCACA 1320
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      TGGAACTTGTGCCACAACTTGCACCCCTTCACCATCTCACATGAAACTAATGCTACAGTC 1380
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      CACTGATGAATTACCAATCAATATGGGATTCACAGGCAAGGGAAATACTACAAAACCTGA 1440
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      TGGATTGGCTGAGATCATTAAGGCAGGAGCAATGGGCTTGAAGTTGCATGAAGATTGGGG 1500
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      AAGCACCCCAGCTGCGATAGATAACTGTTTATCTGTCGCAGAAGCTTTTGATATCCAGGT 1560
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      AAATATCCACACAGACACCTTAAATGAGTCAGGCTGTGTGGAGCATACAATTGCCGCATT 1620
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      TAAAGATAGGACAATACATACATATCATAGTGAAGGAGCAGGTGGTGGTCATGCTCCAGA 1680
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      CATTATCAAAGTATGTGGAGTGAAAAATGTGTTACCCTCTTCAACAAATCCAACTCGGCC 1740
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      ATTTACTTTGAACACTGTAGATGAGCACCTTGATATGCTGATGGTCTGCCATCACCTCGA 1800
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      TAGAAATATCCCAGAAGATGTAGCATTTGCCGAGTCTAGAATTCGAGCTGAAACAATAGC 1860
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      TGCTGAGGATATCTTGCATGACATGGGAGCAATCAGTATCATATCATCCGATTCGCAGGC 1920
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      TATGGGGCGCATTGGAGAGGTGATTACTCGGACATGGCAAACTGCAAATAAGATGAAGAG 1980
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      ACAGAGAGGTAGATTACCTATATCCAGTTCCCCCGATGCTGCAGAGGACAATGACAATTT 2040
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      CCGGATAAGAAGATACATAGCTAAATACACCATAAATCCTGCTATAGTGAATGGCTTTTC 2100
consensus_8810#1      ---GGGGGGGAAAAAC-TTGCTAACTG-ATCATACTTCT--CTTCAGTTT-TTCTATTCA 52
                         *    * * * ** * ***** *  * ****  **   **  ***   *    **  

consensus_8810#0      TGATTTTGTTGGCTCTGTTG-AGGTGGGAAAATTAGCTGACCTTGTTATTTGGAAACCTT 2159
consensus_8810#1      TAATTTTTTTGTTTTTTTTTCAGGTGGGAAAATTAGCTGACCTTGTTATTTGGAAACCTT 112
                      * ***** ***  * * **  ***************************************

consensus_8810#0      CTTTCTTTGGAGCAAAACCAGAAATGGTTATAAAGGGTGGTGCTATTGCATGCGCTAATA 2219
consensus_8810#1      CTTTCTTTGGAGCAAAACCAGAAATGGTTATAAAGGGTGGTGCTATTGCATGCGCTAATA 172
                      ************************************************************

consensus_8810#0      TGGGTGATCCAAATGCTAGCATTCCAACACCTGAACCGGTTATGATGCGACCTATGTTTG 2279
consensus_8810#1      TGGGTGATCCAAATGCTAGCATTCCAACACCTGAACCGGTTATGATGCGACCTATGTTTG 232
                      ************************************************************

consensus_8810#0      GTGCATTTGGAGGGGCTGGAAGTGCCAACTCTATAGCATTTGTGAGCAAGGCTGCTAAAG 2339
consensus_8810#1      GTGCATTTGGAGGGGCTGGAAGTGCCAACTCTATAGCATTTGTGAGCAAGGCTGCTAAAG 292
                      ************************************************************

consensus_8810#0      AAGCTGGCGTTGCAGTGCAGTACAAGCTGGGAAAGAGGGTGGAAGCTGTAGGTCGCGTTC 2399
consensus_8810#1      AAGCTGGCGTTGCAGTGCAGTACAAGCTGGGAAAGAGGGTGGAAGCTGTAGGTCGCGTTC 352
                      ************************************************************

consensus_8810#0      GTGGTTTGACAAAGCTGAATATGAAGCTAAACGATGCACTTCCGAAAATTGATGTCGATC 2459
consensus_8810#1      GTGGTTTGACAAAGCTGAATATGAAGCTAAACGATGCACTTCCGAAAATTGATGTCGATC 412
                      ************************************************************

consensus_8810#0      CTGAAACCTACACGGTTACTGCTGATGGAGAGGTTTTGAGATGTCAACCAACACCCACAG 2519
consensus_8810#1      CTGAAACCTACACGGTTACTGCTGATGGAGAGGTTTTGAGATGTCAACCAACACCCACAG 472
                      ************************************************************

consensus_8810#0      TACCACTATCTCGGAATTACTTCCTCTTTTAGACAACTTTAGTGAACCAGCCTTTCTTAA 2579
consensus_8810#1      TACCACTATCTCGGAATTACTTCCTCTTTTAGACAACTTTAGTGAACCAGCCTTTCTTAA 532
                      ************************************************************

consensus_8810#0      TTAGGGTTAATGCATGCATTTGGTCTCTCTCTTGTATCCTTTTCAATAATATGACTTGTA 2639
consensus_8810#1      TTAGGGTTAATGCATGCATTTGGTCTCTCTCTTGTATCCTTTTCAATAATATGACTTGTA 592
                      ************************************************************

consensus_8810#0      AACTTAAAGCTTTTTATGTGAGTTTTCCTTCACAGGTGCAATAAGGATAACTTTTGGCCG 2699
consensus_8810#1      AACTTAAAGCTTTTTATGGGAGTTTTCCT------------------------------- 621
                      ****************** **********                               

consensus_8810#0      TAATGCTTGATTTGAATACACTTGTGTTATCTTCATGCTTTATTATATAATCAAGTTTAT 2759
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      AAAAAAAAGA 2769
consensus_8810#1      ----------