cluster # 8835

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Oryza sativa
cluster # 8835 cluster # 8835 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8835#0 length = 1682 sequences # 6
consensusID : consensus_8835#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1682
fasta sequence
                              [CGCCACCGCCGCCCCGCGCCTCCGCGCCGCCGCGTGGGGCAGCCTCTCGCCGCCGGCGCCAGTGCGGGCGCAGTTCGTGAGTCTCCCGCTCAGTCTCCCCGGCCGCTACGCCTCGCTGCGCCTGCGCGCCTCGGCGGCGGCGGCGGCGAAGGAAGGGGCGGAGGAGATGGGGTTCGAGGAGATGGCGGCCGGGACGCGGAGGCGCTACTACATGCTCGGCGGGAAGGGCGGGGTCGGGAAGACGAGCTGCGCGGCGTCGCTGGCCGTGCGCTTCGCCAACAACGGGCACCCCACCCTCGTCGTCTCCACCGACCCCGCGCACTCCCTCAGCGACTCCTTCGCGCAGGATTTGAGCGGCGGGGCGCTCGTGCCGGTCGAGGGGCCTGAGGCGCCATTGTTTGCGCTTGAGATAAATCCTGAGAAAGCCCGAGAAGAGTTTCGTGCAGCAAGTCAGAAGAATGGAGGGACTGGGGTAAAGGACTTCATGGATGGCATGGGACTGGGAGTGCTTGCTGAGCAGCTGGGGGAGTTAAAACTGGGGGAGTTATTGGACACACCACCACCAGGATTGGATGAAGCAATAGCGATTTCAAAGGTTATGCAATTCCTTGAAGCACAAGAGTATAGCATGTTTAGACGCATTGTTTTTGACACTGCTCCAACGGGCCATACACTCCGTTTATTATCCTTGCCAGATTTCCTGGATGCATCTATTGGGAAGATCTTGAAGCTTAGGAGCAAGATCGCTTCTGCAACATCAGCTATTAAATCAGTTTTTGGACAAGAAGTTCAACAGCAGGATGCAGCAAACAAATTGGAGCAGCTGAGAGAAAGGATGGTCCAAGTGCGAGAACTTTTTCGTGACACAGAATCAACTGAATTTATAATTGTGACTATTCCAACAGTGATGGCAATAAGTGAATCAGCAAGACT-ACATTCTTCCCTAAGAAATGAAAGTGTTCCCGTTAAGAGACTCATTGTTAACCAAATTCTACCACCTTCGTCATCAGACTGTAAATTCTGTGCTATAAAAAGAAAGGATCAAACACGTGCTTTGGATATGATAAGGAATGATCCAGAGCTAATGGGGCTGAACTTAATCCAAGCACCTCTTGTCGACATGGAAATAAGAGGCGTTCCTGCTCTGAAGTTTTTGGGCGATATAGTATGGAAGTAACTTCACAATGGAAAATACGATAAACTTCATCACACCTACTTATTGAAGTGCTTTGCAATGCAAACTTTGGTAGCTGCAAGTATCAGCATGGATAGAGCTAGAATGCAAGTGTGCAACTTAGCAGATGCCCAATCTCATGTGAGTAAGTAGCATCTCGCTGAAGGTTTGCCGGAATAGCATATACTAGGGGGATTGTGTTCTAAAAAAAAA-----GGGGGGGGGATTGGAT-CAAGCTGCACTAATATCAAGTCCATTGAGGCAACATGCCGGTGATATTTCTGCTTCTTTATCCCTTTAATAGGAGCGATTCTGAGGGTTTTGAGTCCATAACTTTGCACTAAAATTAATTTTGTTCGTGCATCATGTAAAGTCGGTTAGAGAATGAAGAATGGAGAAAATCAGACAACACTTTTAAGTAAAAAAAAAAAAAGATTAGTGTGACTTANATGTAAATAGACNATATTGACAAGACAGCTGCAGCAGTTGAGATTTTAATTTAAAAAAAAAA]

[+] EMBL CB683545             [CGCCACCGCCGCCCCGCGCCTCCGCGCCGCCGCGTGGGGCAGCCTCTCGCCGCCGGCGCCAGTGCGGGCGCAGTTCGTGAGTCTCCCGCTCAGTCTCCCCGGCCGCTACGCCTCGCTGCGCCTGCGCGCCTCGGCGGCGGCGGCGGCGAAGGAAGGGGCGGAGGAGATGGGGTTCGAGGAGATGGCGGCCGGGACGCGGAGGCGCTACTACATGCTCGGCGGGAAGGGCGGGGTCGGGAAGACGAGCTGCGCGGCGTCGCTGGCCGTGCGCTTCGCCAACAACGGGCACCCCACCCTCGTCGTCTCCACCGACCCCGCGCACTCCCTCAGCGACTCCTTCGCGCAGGATTTGAGCGGCGGGGCGCTCGTGCCGGTCGAGGGGCCTGAGGCGCCATTGTTTGCGCTTGAGATAAATCCTGAGAAAGCCCGAGAAGAGTTTCGTGCAGCAAGTCAGAAGAATGGAGGGACTGGGGTAAAGGACTTCATGGATGGCATGGGACTGGGAGTGCTTGCTGAGCAGCTGGGGGAGTTAAAACTGGGGGAGTTATTGGACACACCACCACCAGGATTGGATGAAGCAATAGCGATTTCAAAGGTTATGCAATTCCTTGAAGCACAAGAGTATAGCATGTTTAGACGCATTGTTTTTGACACTGCTCCAACGGGCCATACACTCCGTTTATTATCCTTGCCAGATTTCCTGGATGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK099676             [                                                                                                                                                                                                                                                                                                                                                                                                      GCCATTGTTTGCGCTTGAGATAAATCCTGAGAAAGCCCGAGAAGAGTTTCGTGCAGCAAGTCAGAAGAATGGAGGGACTGGGGTAAAGGACTTCATGGATGGCATGGGACTGGGAGTGCTTGCTGAGCAGCTGGGGGAGTTAAAACTGGGGGAGTTATTGGACACACCACCACCAGGATTGGATGAAGCAATAGCGATTTCAAAGGTTATGCAATTCCTTGAAGCACAAGAGTATAGCATGTTTAGACGCATTGTTTTTGACACTGCTCCAACGGGCCATACACTCCGTTTATTATCCTTGCCAGATTTCCTGGATGCATCTATTGGGAAGATCTTGAAGCTTAGGAGCAAGATCGCTTCTGCAACATCAGCTATTAAATCAGTTTTTGGACAAGAAGTTCAACAGCAGGATGCAGCAAACAAATTGGAGCAGCTGAGAGAAAGGATGGTCCAAGTGCGAGAACTTTTTCGTGACACAGAATCAACTGAATTTATAATTGTGACTATTCCAACAGTGATGGCAATAAGTGAATCAGCAAGACT ACATTCTTCCCTAAGAAATGAAAGTGTTCCCGTTAAGAGACTCATTGTTAACCAAATTCTACCACCTTCGTCATCAGACTGTAAATTCTGTGCTATAAAAAGAAAGGATCAAACACGTGCTTTGGATATGATAAGGAATGATCCAGAGCTAATGGGGCTGAACTTAATCCAAGCACCTCTTGTCGACATGGAAATAAGAGGCGTTCCTGCTCTGAAGTTTTTGGGCGATATAGTATGGAAGTAACTTCACAATGGAAAATACGATAAACTTCATCACACCTACTTATTGAAGTGCTTTGCAATGCAAACTTTGGTAGCTGCAAGTATCAGCATGGATAGAGCTAGAATGCAAGTGTGCAACTTAGCAGATGCCCAATCTCATGTGAGTAAGTAGCATCTCGCTGAAGGTTTGCCGGAATAGCATATACTAGGGGGATTGTGTTCTAAAAAAAAA     GGGGGGGGGATTGGAT CAAGCTGCACTAATATCAAGTCCATTGAGGCAACATGCCGGTGATATTTCTGCTTCTTTATCCCTTTAATAGGAGCGATTCTGAGGGTTTTGAGTCCATAACTTTGCACTAAAATTAATTTTGTTCGTGCATCATGTAAAGTCGGTTAGAGAATGAAGAATGGAGAAAATCAGACAACACTTTTAAGT                                                                                           ]
[-] EMBL CB683126             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGTTTAGACGCATTGTTTTTGACACTGCTCCAACGGGCCATACACTCCGTTTATTATCCTTGCCAGATTTCCTGGATGCATCTATTGGGAAGATCTTGAAGCTTAGGAGCAAGATCGCTTCTGCAACATCAGCTATTAAATCAGTTTTTGGACAAGAAGTTCAACAGCAGGATGCAGCAAACAAATTGGAGCAGCTGAGAGAAAGGATGGTCCAAGTGCGAGAACTTTTTCGTGACACAGAATCAACTGAATTTATAATTGTGACTATTCCACCAGTGATGGCAATAAGTGAATCAGCAAGACT ACATTCTTCCCTAAGAAATGAAAGTGTTCCCGTTAAGAGACTCATTGTTAACCAAATTCTACCACCTTCGTCATCAGACTGTAAATTCTGTGCTATAAAAAGAAAGGATCAAACACGTGCTTTGGATATGATAAGGAATGATCCAGAGCTAATGGGGCTGAACTTAATCCAAGCACCTCTTGTCGACATGGAAATAAGAGGCGTTCCTGCTCTGAAGTTTTTGGGCGATATAGTATGGAAGTAACTTCCCAATGGAAAATACGATAAACTTCATCACACCTACTTATTGAAGTGCTTTGCAATGCAAACTTTGGTAGCTGCAAGTATCAGCATGGATAGAGCTAGAATGCAAGTGTGCAACTTAGCAGATGCCCAATCTCATGTGAGTAAGTAGCATCTCGCTGAAGGTTTGCCGGAATAGCATATACTAGGGGGATTGTGTTCTAAAAAAAAA     GGGGGGGGGATTGGATGCAAGCTCCACTAATATCAAGTCCATTGAGGCAAaaaaaagg                                                                                                                                                                                                                                              ]
[-] EMBL CB635631             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTGGGAAGATCTTGAAGCTTAGGAGCAAGATCGCTTTTGCAACATCAGCTATTAAATCAGTTTTTGGACAAGAAGTTCAACAGCAGGATGCAGCAAACAAATTGGAGCAGCTGAGAGAAAGGATGGTCCAAGTGCGAGAACTTTTTCGTGACACAGAATCAACTGAATTTATAATTGTGACTATTCCAACAGTGATGGCAATAAGTGAATCAGCAAGATT ACATTTTTCCCTAAGAAATGAGAGTGTTCCCGTTAAGAGACTCATTGTTAACCAAATTTTACCCCCTTCGTCATCAGACTGTAAATTTTGTGCTATAAAAAGAAAGGATCAAACACGTGCTTTGGATATGATAAGGAATGATCCAGAGCTAATGGGGCTGAACTTAATCCAAGCCCCTCTTGTCGACATGGAAATAAGAGGCGTTCCTGCTTTGAAGTTTTTGGGCGATATAGTATGGAAGTAACTTCCCAATGGAAAATACGATAAACTTCATCCCCCCTACTTATTGAAGTGCTTTGCAATGCAAACTTTGGTAGCTGCAAGTATCAGCATGGATAGAGCTAGAATGCAACTGTGCAACTTAGCAGATGCCCAATTTCATGTGAGTAAGTAGCATTTCGCTGAAGGTTTCCCGGAATAGCATATATTAGGGGGATTGTGTTTTAAAAAAAAAAAGGGGGGGGGGGGATTGGAT CAAGCTGCACTAATATCAAGTCCATTGAGGCAACATGCCAGTGATATTTCTGCTTCTT                                                                                                                                                                                                                             ]
[-] EMBL CA762228             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGTGAATCAGCAAGACTNACATTCTTCCCTAAGAAATGAGAGTGTTCCCG TAAGAGACTCA TGTTAACCAAATTCTACCACNTTTGTCATCAGACTGTAAATTCTGTGCTATAAAAAGAAAGGATCAAACACGTGCTTNGGATATGATAAGGAATGATCCAGAGCTAATGGGGCTGAACTTAATCCAAGCACCTCTNGTCGACATGGAAACAAGAGGCGTTCCTGCTCTGAAGTTTTTGGGCGATATAGTATGGAACTAACTTCACAATGGAAAATACGATAAACTTCATCACACCTACTTATTGAAGTGCTTTGCAATGCAAACTTTGGTAGCTGCAAGTATCAGCATGGATAGAGCTAGAATGCAACTGTGCAACTTAGCAGATGCCCAATCTCATGTGAGTAAGTAGCATCTCGCTGAAGGTTTGCCGGAATAGCATTTACTAGGGGGATTGTGTTCTAAAAAAAAAAAGGGGGGGGGGGGATTGGAT CAAGCTGCACTAATATCAAGTCCATTGAGGCAACATGCCAGTGATATTTCTGCTTCTTTATCCCTTTAATAGGAGCGATTCTGAGGGTTTTGAGTCCATAACTTTGCACTAAAATTAATTTTGTTCGTGCATCATGTAAAGTCGGTTAGAGAATGAAGAATGGAGAAAATCAGACAACACTTTTAAGTAAAAAAAAAAAA                                                                               ]
[+] EMBL CA753844             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGCTGCAAGTATCAGCATGGATAGAGCTAGAATGCAAGTGTGCAACTTAGCAGATGCCCAATCTCATGTGAGTAAGTAGCATCTCGCTGAAGGTTTGCCGGAATAGCATATACTAGGGGGATTGTGTTCTAAAAAAAAA     GGGGGGGGGATTGGAT CAAGCTGCACTAATATCAAGTCCATTGAGGCAACATGCCGGTGATATTTCTGCTTCTTTATCCCTTTAATAGGAGCGATTCTGAGGGTTTTGAGTCCATAACTTTGCACTAAAATTAATTTTGTTCGTGCATCATGTAAAGTCGGTTAGAGAATGAAGAATGGAGAAAATCAGACAACACTTTTAAGTAAATTTTCTTACAGATTAGTGTGACTTANATGTAAATAGACNATATTGACAAGACAGCTGCAGCAGTTGAGATTTTAATTTAAAAAAAAAA]




>consensus_8835#0
CGCCACCGCCGCCCCGCGCCTCCGCGCCGCCGCGTGGGGCAGCCTCTCGCCGCCGGCGCC
AGTGCGGGCGCAGTTCGTGAGTCTCCCGCTCAGTCTCCCCGGCCGCTACGCCTCGCTGCG
CCTGCGCGCCTCGGCGGCGGCGGCGGCGAAGGAAGGGGCGGAGGAGATGGGGTTCGAGGA
GATGGCGGCCGGGACGCGGAGGCGCTACTACATGCTCGGCGGGAAGGGCGGGGTCGGGAA
GACGAGCTGCGCGGCGTCGCTGGCCGTGCGCTTCGCCAACAACGGGCACCCCACCCTCGT
CGTCTCCACCGACCCCGCGCACTCCCTCAGCGACTCCTTCGCGCAGGATTTGAGCGGCGG
GGCGCTCGTGCCGGTCGAGGGGCCTGAGGCGCCATTGTTTGCGCTTGAGATAAATCCTGA
GAAAGCCCGAGAAGAGTTTCGTGCAGCAAGTCAGAAGAATGGAGGGACTGGGGTAAAGGA
CTTCATGGATGGCATGGGACTGGGAGTGCTTGCTGAGCAGCTGGGGGAGTTAAAACTGGG
GGAGTTATTGGACACACCACCACCAGGATTGGATGAAGCAATAGCGATTTCAAAGGTTAT
GCAATTCCTTGAAGCACAAGAGTATAGCATGTTTAGACGCATTGTTTTTGACACTGCTCC
AACGGGCCATACACTCCGTTTATTATCCTTGCCAGATTTCCTGGATGCATCTATTGGGAA
GATCTTGAAGCTTAGGAGCAAGATCGCTTCTGCAACATCAGCTATTAAATCAGTTTTTGG
ACAAGAAGTTCAACAGCAGGATGCAGCAAACAAATTGGAGCAGCTGAGAGAAAGGATGGT
CCAAGTGCGAGAACTTTTTCGTGACACAGAATCAACTGAATTTATAATTGTGACTATTCC
AACAGTGATGGCAATAAGTGAATCAGCAAGACTACATTCTTCCCTAAGAAATGAAAGTGT
TCCCGTTAAGAGACTCATTGTTAACCAAATTCTACCACCTTCGTCATCAGACTGTAAATT
CTGTGCTATAAAAAGAAAGGATCAAACACGTGCTTTGGATATGATAAGGAATGATCCAGA
GCTAATGGGGCTGAACTTAATCCAAGCACCTCTTGTCGACATGGAAATAAGAGGCGTTCC
TGCTCTGAAGTTTTTGGGCGATATAGTATGGAAGTAACTTCACAATGGAAAATACGATAA
ACTTCATCACACCTACTTATTGAAGTGCTTTGCAATGCAAACTTTGGTAGCTGCAAGTAT
CAGCATGGATAGAGCTAGAATGCAAGTGTGCAACTTAGCAGATGCCCAATCTCATGTGAG
TAAGTAGCATCTCGCTGAAGGTTTGCCGGAATAGCATATACTAGGGGGATTGTGTTCTAA
AAAAAAAGGGGGGGGGATTGGATCAAGCTGCACTAATATCAAGTCCATTGAGGCAACATG
CCGGTGATATTTCTGCTTCTTTATCCCTTTAATAGGAGCGATTCTGAGGGTTTTGAGTCC
ATAACTTTGCACTAAAATTAATTTTGTTCGTGCATCATGTAAAGTCGGTTAGAGAATGAA
GAATGGAGAAAATCAGACAACACTTTTAAGTAAAAAAAAAAAAAGATTAGTGTGACTTAN
ATGTAAATAGACNATATTGACAAGACAGCTGCAGCAGTTGAGATTTTAATTTAAAAAAAA
AA
clustalw multiple alignements is not computed in this case